[go: up one dir, main page]

EP2627782A2 - Marker sequences for systemic lupus erythematosus and the use thereof - Google Patents

Marker sequences for systemic lupus erythematosus and the use thereof

Info

Publication number
EP2627782A2
EP2627782A2 EP11782567.9A EP11782567A EP2627782A2 EP 2627782 A2 EP2627782 A2 EP 2627782A2 EP 11782567 A EP11782567 A EP 11782567A EP 2627782 A2 EP2627782 A2 EP 2627782A2
Authority
EP
European Patent Office
Prior art keywords
homo sapiens
protein
isoform
seq
lupus erythematosus
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP11782567.9A
Other languages
German (de)
French (fr)
Inventor
Angelika Lueking
Axel Kowald
Stefan Müllner
Christian Scheer
Matthias Schneider
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Oncimmune Germany GmbH
Original Assignee
Protagen GmbH
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Protagen GmbH filed Critical Protagen GmbH
Priority to EP11782567.9A priority Critical patent/EP2627782A2/en
Publication of EP2627782A2 publication Critical patent/EP2627782A2/en
Withdrawn legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6854—Immunoglobulins
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/106—Pharmacogenomics, i.e. genetic variability in individual responses to drugs and drug metabolism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers

Definitions

  • the present invention relates to novel marker sequences for systemic lupus erythematosus and their diagnostic
  • the invention relates to a diagnostic device containing such marker sequences for systemic lupus erythematosus,
  • Protein biochips are gaining an increasing industrial
  • Protein biochips require the necessary proteins to be available. In particular,
  • the cDNA of a particular tissue in a bacterial or a eukaryotic expression vector, such as yeast, is cloned.
  • the vectors used for the expression are generally characterized by the fact that they carry inducible promoters, with which the timing of protein expression can be controlled.
  • expression vectors have sequences for so-called
  • Affinity epitopes or proteins on the one hand for the specific detection of the recombinant fusion proteins by means of a directed against the affinity epitope
  • Antibody on the other hand becomes the specific one
  • antibody-presenting arrangements are also described (Lal et al (2002) Antibody arrays: An embryonic but growing technology, DDT, 7, 143-149, Kusnezow et al., (2003) Antibody microarrays: An evaluation of production parameters, Proteomics, 3, 254-264).
  • the object of the present invention is to provide improved marker sequences and their diagnostic
  • the invention relates to the use of
  • marker sequences of the invention to or from a patient to be examined is determined.
  • the marker sequences of the invention could by means of differential screening of samples and healthy
  • systemic lupus erythematosus refers to a systemic autoimmune disease from the group of
  • Serositis pleuritis or pericarditis
  • Kidney involvement proteinuria> 0.5 g / d or cylinder
  • haematological findings (haemolytic anemia, leuco-od.
  • Diagnosis as certain (probable) (definition, for example, according to Pschyrembel, de Gruyter, 261st edition (2007), Berlin).
  • Essential to the invention is that the samples are not taken from conventional blood banks, but from SLE patients
  • HIV and HCV are negative and in particular have been tested for infectious diseases.
  • the elaborate trial selection procedure allows e.g. a sufficient advantageous delineation of diseases with SLE-like symptoms. In this way false-positive results are excluded, also due to the strict bioinformatory evaluation (see examples).
  • the production of the protein biochips by means of normalization of at least 1,000, preferably 2,000 different or more autoantigens of humans, which are not specific to the indication for systemic lupus erythematosus.
  • autoantigens may e.g. from body fluids of patients of other autoimmune diseases, e.g. Pancreatic cancer, rheumatoid arthritis, prostate etc.
  • the invention also relates to such indication-specific protein biochips according to the invention for the diagnosis of
  • Normalized protein biochip proves to be particularly advantageous for the identification of the specific marker sequences according to the invention, since others are similar
  • autoimmune relevant marker sequences can be excluded. This is contrary to the teaching of WO2003 / 090694.
  • Intestinal bacteria are directed in humans. As a result, can advantageously with an improved signal / noise
  • Ratio of new marker sequences can be identified.
  • Marker sequences or 50 to 100 or more marker sequences to or from a patient to be examined.
  • the marker sequences according to the invention can also be combined, supplemented or extended with known biomarkers for this indication.
  • the determination of the marker sequences takes place outside the human body and the determination is made in an ex vivo / in vitro diagnosis.
  • the invention relates to the use of marker sequences as diagnostics, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor or in each case a partial sequence or fragment thereof.
  • the invention relates to a method for the diagnosis of systemic lupus erythematosus, wherein a.) At least one marker sequence of a cDNA selected from the group SEQ 1-716 or a respective coding protein or a partial sequence or fragment thereof is applied to a solid support, and b.) with body fluid or
  • Tissue extract of a patient is brought into contact and c.)
  • the detection of an interaction of the body fluid or tissue extract with the marker sequences from a.) Is done.
  • the invention also relates to diagnostics for
  • the detection of such an interaction can, for example, by a probe, in particular by an antibody
  • the invention also has the object of providing a diagnostic device or an assay, in particular a protein biochip, which permits diagnosis or examination for systemic lupus erythematosus.
  • the invention relates to a method for
  • Stratify in particular for risk stratification and / or therapy control of a patient with systemic lupus erythematosus, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor is determined on a patient to be examined.
  • Therapy control also includes the classification of
  • Diagnosis in the sense of this invention means the positive determination of the systemic lupus erythematosus by means of the marker sequences according to the invention and the assignment of the patients to the disease of systemic lupus erythematosus.
  • diagnosis includes medical diagnostics and related investigations, in particular in vitro diagnostics and Laboratory diagnostics, also proteomics and nucleic acid blots
  • diagnosis also includes the
  • Stratification (or stratification) or therapy control in the sense of this invention means that the method according to the invention allows decisions for the treatment and therapy of the patient, be it hospitalization of the patient, Use, effect and / or dosage of one or more drugs, a therapeutic measure or the
  • the term "stratification" includes in particular the
  • patient is understood to mean any subject - human or mammal - with the proviso that the subject is on systemic lupus erythematosus
  • marker sequences in the sense of this invention means that the cDNA or the respective polypeptide or protein obtainable therefrom are significant for systemic lupus erythematosus
  • the cDNA or the respective polypeptide or protein obtainable therefrom can be a
  • erythematosus e.g., antigen (epitope) / antibody (paratope) interaction
  • Marker sequences is detected. Such an interaction is for example a bond, in particular a binding substance to at least one marker sequence according to the invention or in the case of a cDNA hybridization with a suitable substance under selected conditions, in particular stringent
  • Hybridization conditions are: hybridization in 4 x SSC at 65 ° C (alternatively in 50% formamide and 4X SSC at 42 ° C), followed by several washes in 0.1 x SSC at 65 ° C for a total of about one hour.
  • An example of less stringent hybridization conditions is hybridization in 4 x SSC at 37 ° C, followed by several washes in 1 x SSC at room temperature.
  • Such substances are part of a body fluid according to the invention, in particular blood, whole blood, blood plasma, blood serum, patient serum, urine, cerebrospinal fluid,
  • Synovial fluid or a tissue extract of the patient Synovial fluid or a tissue extract of the patient.
  • the marker sequences according to the invention may be present in a significantly higher or lower expression rate or concentration, which indicates systemic lupus erythematosus. This can be done by means of proteomics or
  • Nucleic acid blots the relative expression rates ill / healthy of the marker sequences according to the invention for systemic lupus erythematosus are determined.
  • the marker sequences have a recognition signal which is addressed to the substance to be bound (for example antibodies,
  • the recognition signal is preferably an epitope and / or paratope and / or hapten and, for a cDNA, a hybridization or hybridization protein
  • the marker sequences of the invention are also possible.
  • the invention also relates to the full-length sequences of the markers according to the invention and indeed as defined in Table A on the known database entry, hereinafter called SEQ -716a (cDNA).
  • SEQ 1-716 according to the invention again represent partial sequences, at least with high homology.
  • the specific ones are identical to SEQ 1-716 according to the invention.
  • marker sequences SEQ 1-716 are in accordance with the invention.
  • marker sequences also include such modifications of the cDNA sequence and the corresponding
  • Amino acid sequence such as chemical modification, such as
  • marker sequences In particular, those partial sequences which have an identity of 95%, 90%, in particular 80% or 70% with the marker sequences according to the invention.
  • Partial sequences are also those sequences having 50 to 100 nucleotides, 70-120 nucleotides of a sequence of SEQ 1-716, or peptides obtainable therefrom.
  • Marker sequences are functionally defined and include those sequences which have the same inventive diagnostic function.
  • Marker sequence can be represented in different amounts in one or more areas on a solid support. This allows a variation of the sensitivity.
  • the regions may each comprise a total of marker sequences, i. a sufficient number of different marker sequences, in particular 2 to 5 or 10 or more and optionally further nucleic acids and / or proteins, in particular biomarkers.
  • Biomarkers Further preferred are more than 2,500, more preferably 10,000 or more different or the same
  • Proteins especially biomarkers.
  • Another object of the invention relates to an array of marker sequences containing at least one marker sequence a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor.
  • the group SEQ 1-716 or in each case a protein coding therefor.
  • “arrangement” synonymously means “array” and insofar as this "array” is used to identify substances on marker sequences, this is to be understood as meaning an “assay” or a diagnostic device.
  • the arrangement is designed such that those represented on the assembly
  • Marker sequences are in the form of a grid on a solid support. Furthermore, such arrangements are preferred which include a high density array of protein binders
  • Such high density spotted assemblies are disclosed, for example, in WO 99/57311 and WO 99/57312, and may be advantageously used in a robotic automated high throughput method.
  • test or diagnostic device also includes such
  • Embodiments of a device such as ELISA, bead-based assay, line assay, Western blot, immunochromatographic
  • Invention is the systematic arrangement of proteins on a solid support.
  • the marker sequences of the assembly are fixed to a solid support, but preferably spotted or immobilized imprinted, ie applied reproducible.
  • One or more marker sequences can be duplicated in the totality of all
  • Marker sequences are present and available in different quantities based on a spot. Furthermore, the
  • Marker sequences on the solid support may be standardized (e.g., by serial dilution series of e.g.
  • the invention relates to an assay or protein biochip consisting of an array containing marker sequences according to the invention.
  • the marker sequences are present as clones.
  • Such clones can be obtained, for example, by means of a cDNA expression library according to the invention (Büssow et al., 1998 (supra)).
  • such expression libraries become
  • Obtained marker sequences are obtained. These expression vectors preferably contain inducible promoters. The induction of
  • Expression can e.g. by means of an inductor, such as IPTG.
  • IPTG inductor
  • Suitable expression vectors are described in Terpe et al. (Terpe T Appl Microbiol Biotechnol 2003 Jan; 60 (5): 523-33).
  • Expression libraries are known to the person skilled in the art, these can be prepared according to standard works, such as Sambrook et al., Molecular Cloning, Laboratory Handbook, 2nd edition (1989), CSH press, Cold Spring Harbor, New York Further preferred are such expression libraries
  • tissue specific eg human tissue, in particular human organs
  • expression libraries are also included according to the invention, which can be obtained by exon trapping. Instead of expression library can be spoken synonymously from an expression bank.
  • protein biochips or corresponding expression libraries which have no redundancy (so-called: Uniclone® library) and can be prepared, for example, according to the teachings of WO 99/57311 and WO 99/57312. These preferred Uniclone libraries have a high content of non-defective, fully expressed proteins of a cDNA expression library.
  • the clones may not be such as transformed bacteria, recombinant phage or transformed cells of mammals, insects, fungi, yeasts or plants.
  • the clones are fixed on a solid support, spotted or immobilized.
  • the invention relates to an arrangement, wherein the
  • Marker sequences are present as clones.
  • the marker sequences may be in the form of a fusion protein in the particular form
  • At least one affinity epipope or "tag” contains.
  • the tag may be one such as c-myc, His-tag, Arg-tag, FLAG, alkaline phosphatase, V5 tag, T7 tag or Strep tag, HAT tag, NusA, S-tag, SBP tag , Thioredoxin, DsbA, a fusion protein, preferably a cellulose-binding one
  • solid support includes embodiments such as a filter, a membrane, a magnetic or fluorophore-labeled bead
  • Silicon wafer, glass, metal, plastic, a chip, a mass spectrometric target or a matrix Silicon wafer, glass, metal, plastic, a chip, a mass spectrometric target or a matrix.
  • a filter is preferred according to the invention.
  • the filter is PVDF, nitrocellulose or nylon (e.g., Immobilon P Millipore, Protran Whatman, Hybond N + Amersham).
  • this corresponds to a grid having the order of a microtiter plate (8-12 wells strips, 96 wells, 384 wells or more), a silicon wafer, a chip, a mass spectrometric target or a matrix.
  • the invention relates to an assay or protein biochip for identifying and
  • inventive arrangement or assay with a.) At least one substance to be examined is brought into contact and b.) A binding success is detected.
  • the invention relates to a method for identifying and characterizing a substance for systemic lupus erythematosus, characterized in that a
  • inventive arrangement or assay with a.) At least one substance to be examined is brought into contact and b.) A binding success is detected.
  • the substance to be tested may be any native or non-native biomolecule, a synthetic chemical
  • protein to marker sequence e.g., protein to marker sequence
  • Antigen / antibody or corresponding "means for detecting the binding success" can, for example, by means of
  • reporter enzymes such as alkaline
  • a readout is e.g. by means of a microarray laser scanner, a CCD camera or visually.
  • the invention relates to a drug / drug or prodrug developed for systemic lupus erythematosus and obtainable by the use of the assay or protein biochip according to the invention. Therefore, the invention also relates to the use of an inventive arrangement or an assay for screening agents for systemic lupus erythematosus.
  • the invention also relates to a target for the treatment and therapy of
  • Systemic lupus erythematosus each selected from the group SEQ 1-716 or in each case a protein coding therefor.
  • the invention also relates to the use of the invention
  • Marker sequences preferably in the form of an arrangement, as
  • Affinity material for performing an apheresis or iwS. a blood wash wherein substances from body fluids of a patient with systemic lupus erythematosus, such as blood or plasma, bind to the marker sequences according to the invention and consequently the body fluid can be selectively withdrawn.
  • Ten or more patient samples were individually screened against a cDNA expression library.
  • the systemic lupus erythematosus-specific expression clones were determined by comparison with ten or more healthy samples.
  • the identity of the marker sequences was determined by DNA sequencing.
  • FIG. 1 shows the differential screening between two protein biochips from in each case one cDNA expression bank of a patient and one healthy subject.
  • Differential clones are detected by fluorescence labeling and evaluated bioinformatorisch.
  • biomarker identification various bioinformatic analyzes are carried out. For each serum, microarray reactivities against about 2000
  • Intensity data performed.
  • an internal standard is used, which is spotted on each chip. Since a p-value is calculated for each antigen, methods for correcting multiple testing are used. As a very conservative approach, a Bonferroni correction is performed and, in addition, the less restrictive False Discovery Rate (FDR) is calculated according to Benjamini & Hochberg.
  • FDR False Discovery Rate
  • the data are used to classify the sera.
  • different multivariate methods are used. These are methods from the statistical
  • Threshold method which is suitable for both classification and visual representation of the data.
  • gil4501867 aconitase 2 precursor [Homo sapiens]
  • gil4501885 beta actin [Homo sapiens]
  • gil4501887 actin gamma 1 propeptide [Homo sapiens]
  • solute carrier family 25 mitochondria carrier; adenine nucleotide translocator, member 4 gil55749577
  • gill56071462 solute carrier family 25, member A6 [Homo sapiens]
  • gill78557739 complement component 4B preproprotein [Homo sapiens]
  • gill 19627240 cyclin-dependent kinase inhibitor 2C (pI8, inhibits CDK4), isoform CRA_b [Homo sapiens] gil56786147 cysteine dioxygenase, type I [Homo sapiens]
  • gil5031635 cofilin 1 (non-muscle) [Homo sapiens]
  • gil21536286 brain creatine kinase [Homo sapiens] gil4502847 cold inducible RNA binding protein [Homo sapiens]
  • gill4917109 adaptor-related protein complex 2 mu 1 subunit isoform a [Homo sapiens] gil4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo sapiens]
  • gil4502981 cytochrome c oxidase subunit IV isoform 1 precursor [Homo sapiens]
  • gil4503049 cysteine-rich protein 2 [Homo sapiens]
  • gil4503051 collapsin response mediator protein 1 isoform 2 [Homo sapiens]
  • gil4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
  • gil4503481 eukaryotic translation elongation factor 1 gamma [Homo sapiens]
  • gil4503529 eukaryotic translation Initiation factor 4A isoform 1 [Homo sapiens]
  • gil4503659 ubiquitin-like protein fubi and ribosomal protein S30 precursor [Homo sapiens] gil67089147 farnesyl diphosphate farnesyltransferase 1 [Homo sapiens]
  • gil213417614 fibroblast growth factor 13 isoform 3 [Homo sapiens]
  • gil4503711 fibroblast growth factor receptor 3 isoform 1 precursor [Homo sapiens] gil4503727 FK506 binding protein 3, 25kDa [Homo sapiens] gil56682959 ferritin, heavy polypeptide 1 [Homo sapiens]
  • GABA gamma-aminobutyric acid
  • gil4504111 growth factor receptor-bound protein 2 isoform 1 [Homo sapiens]
  • gill54146191 heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 2 [Homo sapiens] gil31542947 chaperonin [Homo sapiens]
  • gill2545395 islet cell autoantigen 1 [Homo sapiens]
  • gil28178832 isocitrate dehydrogenase 2 (NADP +), mitochondrial precursor [Homo sapiens] gil28178821 isocitrate dehydrogenase 3, beta subunit isoform a precursor [Homo sapiens] gil4504619 insulin-like growth factor binding protein 7 [Homo sapiens]
  • gil4758648 kinesin family member 5B [Homo sapiens]
  • gill 16829964 KiSS-1 metastasis-suppressor [Homo sapiens]
  • gil9845502 ribosomal protein SA [Homo sapiens]
  • gill53945728 microtubule-associated protein 1B [Homo sapiens]
  • microtubule-associated protein tau isoform 4 [Homo sapiens]
  • myeloid / lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, gil57222568
  • gil5031931 nascent polypeptide-associated complex alpha subunit isoform b [Homo sapiens]
  • NM23B protein expressed in [Homo sapiens]
  • gil34098946 nuclease sensitive element binding protein 1 [Homo sapiens]
  • gil71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
  • gil4505621 prostatic binding protein [Homo sapiens]
  • gil22202633 prefoldin subunit 5 isoform alpha [Homo sapiens]
  • gil20149543 placental growth factor vascular endothelial growth factor-related protein
  • gil5453898 protein peptidyl prolyl cis / trans isomerase
  • NIMA interacting 1 [Homo sapiens]
  • gil205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
  • gill56616275 Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo sapiens] gill 10618253 mitochondrial DNA-directed RNA polymerase precursor [Homo sapiens]
  • gil93277122 RNA binding motif protein 4 [Homo sapiens]
  • gill56416009 regulator of G-protein signaling 16 [Homo sapiens] gil4506649 ribosomal protein L3 isoform a [Homo sapiens] gill6579885 ribosomal protein L4 [Homo sapiens]
  • gil4506633 ribosomal protein L31 isoform 1 [Homo sapiens] gill6117791 ribosomal protein L35a [Homo sapiens]
  • gil4506725 ribosomal protein S4 X-linked X isoform [Homo sapiens] gil4506727 ribosomal protein S4, Y-linked 1 Y isoform [Homo sapiens] gill 3904870 ribosomal protein S5 [Homo sapiens]
  • solute carrier family 25 mitochondria carrier; citrate transporter
  • member 1 precursor Homo gil21389315
  • gil4507171 secreted protein, acidic, cysteine-rich [Homo sapiens]
  • gil 149999611 signal recognition particle 14kDa homologous Alu RNA binding protein
  • gill5208660 tripartite motif protein 21 homologous Alu RNA binding protein
  • gill08796056 TROVE domain family member 2 isoform 1 [Homo sapiens]
  • gil4507239 signal sequence receptor, beta precursor [Homo sapiens]
  • gil29540543 sulfotransferase family, cytosolic, 1A, phenolic-preferring, member 1 isoform b [homo sapiens] gil92859638 synaptotagmin V [homo sapiens]
  • gil4507645 triosephosphate isomerase 1 [Homo sapiens]
  • gil4507677 heat shock protein 90kDa beta, member 1 [Homo sapiens]
  • gil6005942 valosin-containing protein [Homo sapiens]
  • gil4507961 zinc finger protein 36 C3H type, homologous [Homo sapiens]
  • gil4503515 eukaryotic translation Initiation factor 3, subunit 3 gamma, 40kDa [Homo sapiens]
  • gil4507285 syntaxin 10 [Homo sapiens]
  • gil46909598 a disintegrin and metalloproteinase domain 15 isoform 5 preproprotein [Homo sapiens] gil4505229 Fas-associated via death domain [Homo sapiens]
  • gil4759276 RNA U3 small nucleolar interacting protein 2 [Homo sapiens]
  • gill95927015 phosphatidylinositol transfer protein, membrane-associated isoform a [Homo sapiens]
  • gill 16256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
  • Rho GTPase activating protein RICH2 [Homo sapiens]
  • gill94294519 nuclear receptor subfamily 1 group H, member 3 isoform c [Homo sapiens] gil65301139 ATPase, class II, type 9A [Homo sapiens]
  • gil6912540 nucleotide binding protein 2 (MinD homologue, E. coli) [Homo sapiens]
  • TNF receptor-associated protein 1 [Homo sapiens]
  • RecName: Full Major facilitator superfamily domain-containing protein 10; AltName: gil74735668
  • gil5031669 cyclin-dependent kinase 2 associated protein 2 [Homo sapiens]
  • G protein guanine nucleotide binding protein
  • beta polypeptide 2-like 1 guanine nucleotide binding protein
  • gil5454064 RNA binding motif protein 14 Homo sapiens
  • gil5453595 adenylyl cyclase-associated protein [Homo sapiens]
  • gil5454166 vesicle transport through interaction with t-SNAREs 1B [Homo sapiens]
  • gil36287060 K (lysine) acetyltransferase 5 isoform 3 [Homo sapiens]
  • RNA-binding protein 1 isoform 1 [Homo sapiens]
  • gil6005764 GABA (A) receptor-associated protein [Homo sapiens]
  • gil20336290 DEAH Adi-Glu-Ala-His box polypeptides 30 isoform 2 [Homo sapiens]
  • RNA binding protein autoantigenic, hnRNP-associated with lethal yellow
  • gil82659109 retinoblastoma-associated factor 600 [Homo sapiens]
  • gil4507975 zinc finger protein 345 [Homo sapiens]
  • gil7657196 zinc finger protein 330 [Homo sapiens]
  • gil7657381 PRP19 / PS04 pre-mRNA processing factor 19 homolog [Homo sapiens]
  • gil54607124 RNA binding motif protein 15B [Homo sapiens]
  • glioma tumor suppressor candidate region protein 2 (AF182076_1) [Homo sapiens]
  • gil7305503 stomatin (EPB72) -like 2 [Homo sapiens]
  • gil7705716 nitric oxide synthase interacting protein [Homo sapiens]
  • gill89083821 inhibitor of growth family member 4 isoform 9 [Homo sapiens]
  • gill56142184 ankyrin repeat domain 39 [Homo sapiens]
  • gil75677349 poly (A) binding protein interacting protein 2 [Homo sapiens]
  • gil7705433 eukaryotic translation Initiation factor 3 subunit 6 interacting protein [Homo sapiens]
  • gil7705294 actin-like 6B [Homo sapiens]
  • gil37537687 zinc finger protein 444 [Homo sapiens]
  • gil7020625 unnamed protein product [Homo sapiens]
  • gil8922328 RNA binding motif protein 22 [Homo sapiens]
  • gill7999541 vacuolar protein sorting 35 [Homo sapiens]
  • gil57863279 Meisl myeloid ecotropic viral Integration site 1 homologue 3 isoform 2 [Homo sapiens]
  • gil94536838 poly (ADP-ribose) polymerase family, member 6 [Homo sapiens]
  • gil70778869 invasion inhibitory protein 45 [Homo sapiens]
  • gil 130978962 adrenocortical dysplasia homologous isoform 2 [Homo sapiens]
  • gil30581160 ganglioside-induced differentiation-associated protein 1-like 1 [Homo sapiens]
  • gill3128992 hypothetical protein MGC2803 [Homo sapiens]
  • glial cell differentiation regulator [Homo sapiens]
  • gill46198654 zinc finger protein 768 [Homo sapiens]
  • gil 13654276 queuine tRNA-ribosyltransferase 1 [Homo sapiens]
  • gil42734379 THAP domain containing, apoptosis associated protein 3 [Homo sapiens]
  • gil55742736 zinc finger protein 700 [Homo sapiens]
  • gil217416379 heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo sapiens]
  • gil34878735 F-box protein 44 isoform 1 [Homo sapiens]
  • HGFL protein isoform 2 [Homo sapiens]
  • gil22035616 oxysterol-binding protein-like protein 7 [Homo sapiens]
  • gil30520320 ring finger protein 166 [Homo sapiens]
  • gil28274701 zinc finger protein 511 [Homo sapiens]
  • gill33922582 zinc finger protein 358 [Homo sapiens]
  • gill90341093 fibroblast growth factor binding protein 3 [Homo sapiens]
  • gill 10681708 zinc finger protein 579 [Homo sapiens]
  • gil22749235 zinc finger protein 709 [Homo sapiens]
  • RNA III DNA directed polypeptides H (22.9kD) isoform a [Homo sapiens] gil21699088 zinc finger protein 627 [Homo sapiens]
  • gil30026034 solute carrier family 35 member B2 [Homo sapiens]

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Microbiology (AREA)
  • Pathology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Cell Biology (AREA)
  • General Physics & Mathematics (AREA)
  • Medicinal Chemistry (AREA)
  • Food Science & Technology (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Peptides Or Proteins (AREA)

Abstract

The invention relates to novel marker sequences for systemic lupus erythematosus and to the use thereof in diagnosis as well as to a method for screening potential active ingredients for systemic lupus erythematosus diseases using said marker sequences. The invention further relates to a diagnostic device containing such marker sequences for systemic lupus erythematosus, especially to a protein biochip and the use thereof.

Description

Markersequenzen für Systemischer Lupus erythematodes und deren Verwendung Marker sequences for systemic lupus erythematosus and their use
Beschreibung description
Die vorliegende Erfindung betrifft neue Markersequenzen für Systemischer Lupus erythematodes und deren diagnostische The present invention relates to novel marker sequences for systemic lupus erythematosus and their diagnostic
Verwendung samt einem Verfahren zum Screenen von potentiellen Wirkstoffen für Systemischer Lupus erythematodes - Erkrankungen mittels dieser MarkerSequenzen . Ferner betrifft die Erfindung eine diagnostische Vorrichtung enthaltend solche MarkerSequenzen für Systemischer Lupus erythematodes, Use including a method for screening potential drugs for Systemic Lupus Erythematosus Diseases by means of these marker sequences. Furthermore, the invention relates to a diagnostic device containing such marker sequences for systemic lupus erythematosus,
insbesondere einen Proteinbiochip und dessen Verwendung. in particular a protein biochip and its use.
Proteinbiochips gewinnen eine zunehmende industrielle Protein biochips are gaining an increasing industrial
Bedeutung in der Analytik und Diagnostik sowie in der Meaning in analytics and diagnostics as well as in the
Pharmaentwicklung . Proteinbiochips haben sich als Pharmaceutical development. Protein biochips have proven to be
Screeninginstrumente etabliert. Established screening tools.
Hierbei wird die schnelle und hochparallele Detektion einer Vielzahl spezifisch bindender Analysemoleküle in einem Here, the fast and highly parallel detection of a variety of specific binding analysis molecules in one
einzigen Experiment ermöglicht. Zur Herstellung von single experiment allows. For production of
Proteinbiochips ist es erforderlich, die benötigten Proteine zur Verfügung zu haben. Hierzu haben sich insbesondere  Protein biochips require the necessary proteins to be available. In particular
Protein-Expressionsbibliotheken etabliert. Die Hochdurchsat z- Klonierung von definierten offenen Leserahmen ist eine Protein expression libraries established. High throughput z cloning of defined open reading frames is one
Möglichkeit (Heyman, J.A., Cornthwaite, J., Foncerrada, L., Gilmore, J.R., Gontang, E., Hartman, K.J., Hernandez, C.L., Hood, R., Hull, H.M., Lee, W.Y., Marcil, R., Marsh, E.J., Mudd, K.M., Patino, M.J., Purcell, T.J., Rowland, J.J., Possibility (Heyman, JA, Cornthwaite, J., Foncerrada, L., Gilmore, JR, Gontang, E., Hartman, KJ, Hernandez, CL, Hood, R., Hull, HM, Lee, WY, Marcil, R. , Marsh, EJ, Mudd, KM, Patino, MJ, Purcell, TJ, Rowland, JJ,
Sindici, M.L. and Hoeffler, J.P. (1999) Genome-scale cloning and expression of individual open reading frames using Sindici, M.L. and Hoeffler, J.P. (1999) Genome-scale cloning and expression of individual open reading frames using
topoisomerase I-mediated ligation. Genome Res, 9, 383-392; Kersten, B., Feilner, T., Kramer, A., Wehrmeyer, S., Possling, A., Witt, I., Zanor, M.I., Stracke, R., Lueking, A., topoisomerase I-mediated ligation. Genome Res, 9, 383-392; Kersten, B., Feilner, T., Kramer, A., Wehrmeyer, S., Possling, A., Witt, I., Zanor, MI, Stracke, R., Lueking, A.,
Kreut zberger , J., Lehrach, H. and Cahill, D.J. (2003) Kreut zberger, J., Lehrach, H. and Cahill, D.J. (2003)
Generation of Arabidopsis protein chip for antibody and serum Screening. Plant Molecular Biology, 52, 999-1010; Reboul, J., Vaglio, P., Rual, J.F., Lamesch, P., Martinez, M., Armstrong,Generation of Arabidopsis protein chip for antibody and serum screening. Plant Molecular Biology, 52, 999-1010; Reboul, J., Vaglio, P., Rual, J. F., Lamesch, P., Martinez, M., Armstrong,
C. M., Li, S., Jacotot, L., Bertin, N . , Janky, R., Moore, T., Hudson, J.R., Jr . , Hartley, J.L., Brasch, M.A., Vandenhaute, J., Boulton, S., Endress, G.A., Jenna, S., Chevet, E., C.M., Li, S., Jacotot, L., Bertin, N. , Janky, R., Moore, T., Hudson, J.R., Jr. Hartley, J.L., Brasch, M.A., Vandenhaute, J., Boulton, S., Endress, G.A., Jenna, S., Chevet, E.,
Papasotiropoulos , V., Tolias, P.P., Ptacek, J., Snyder, M., Huang, R., Chance, M.R., Lee, H., Doucette-Stamm, L., Hill,Papasotiropoulos, V., Tolias, P.P., Ptacek, J., Snyder, M., Huang, R., Chance, M.R., Lee, H., Doucette strain, L., Hill,
D. E. and Vidal, M. (2003) C. elegans ORFeome ersion 1.1: D.E. and Vidal, M. (2003) C. elegans ORFeome ersion 1.1:
experimental verification of the genome annotation and experimental verification of the genome annotation and
resource for proteome-scale protein expression. Nat Genet , 34, 35-41.; Walhout, A.J., Temple, G.F., Brasch, M.A., Hartley, J.L., Lorson, M.A., van den Heuvel, S. and Vidal, M. (2000) GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames or ORFeomes. Methods Enzymol , 328, 575-592) . Allerdings hängt ein solcher Ansatz stark mit dem Fortschritt der Genom-Sequenzierungsprojekte und der Annotierung dieser Gensequenzen zusammen. Darüber hinaus ist die Bestimmung der exprimierten Sequenz aufgrund resource for proteome-scale protein expression. Nat Genet, 34, 35-41; Walhout, AJ, Temple, GF, Brasch, MA, Hartley, JL, Lorson, MA, van den Heuvel, S. and Vidal, M. (2000) GATEWAY recombinational cloning: application to the cloning of large numbers of open reading frames ORFeomes. Methods Enzymol, 328, 575-592). However, such an approach is strongly related to the progress of genome sequencing projects and the annotation of these gene sequences. In addition, the determination of the expressed sequence is due
differenzieller Spleißvorgänge nicht immer eindeutig. Dieses Problem kann durch die Anwendung von cDNA- Expressionsbibliotheken umgangen werden (Büssow, K., Cahill, D., Nietfeld, W., Bancroft, D., Scherzinger, E., Lehrach, H. and Walter, G. (1998) A method for global protein expression and antibody Screening on high-density filters of an arrayed cDNA library. Nucleic Acids Research, 26, 5007-5008; Büssow, K., Nordhoff, E., Lübbert, C, Lehrach, H. and Walter, G. differential splicing is not always clear. This problem can be circumvented by the use of cDNA expression libraries (Büssow, K., Cahill, D., Nietfeld, W., Bancroft, D., Scherzinger, E., Lehrach, H. and Walter, G. (1998). Nucleic Acids Research, 26, 5007-5008, Büssow, K., Nordhoff, E., Lübbert, C, Lehrach, H. and Walter , G.
(2000) A human cDNA library for high-throughput protein expression Screening. Genomics, 65, 1-8; Holz, C, Lueking, A., Bovekamp, L . , Gut jähr, C, Bolotina, N., Lehrach, H. and Cahill, D.J. (2001) A human cDNA expression library in yeast enriched for open reading frames. Genome Res, 11, 1730-1735; Lueking, A., Holz, C, Gotthold, C., Lehrach, H. and Cahill, D. (2000) A System for dual protein expression in Pichia pastoris and Escherichia coli, Protein Expr. Purif. , 20, 372- 378) . Hierbei wird die cDNA eines bestimmten Gewebes in einen bakteriellen oder einen eukaryotischen Expressionsvektor, wie z.B. Hefe, einkloniert. Die für die Expression verwendeten Vektoren zeichnen sich im Allgemeinen dadurch aus, dass sie induzierbare Promotoren tragen, mit denen sich der Zeitpunkt der Proteinexpression steuern lässt. Darüber hinaus weisen Expressionsvektoren Sequenzen für so genannte (2000) A human cDNA library for high-throughput protein expression screening. Genomics, 65, 1-8; Wood, C, Lueking, A., Bovekamp, L. , Gut Jahr, C, Bolotina, N., Lehrach, H. and Cahill, DJ (2001) A human cDNA expression library in yeast enriched for open reading frames. Genome Res, 11, 1730-1735; Lueking, A., Holz, C, Gotthold, C., Lehrach, H. and Cahill, D. (2000) A system for dual protein expression in Pichia pastoris and Escherichia coli, protein Expr. Purif. , 20, 372-378). Here, the cDNA of a particular tissue in a bacterial or a eukaryotic expression vector, such as yeast, is cloned. The vectors used for the expression are generally characterized by the fact that they carry inducible promoters, with which the timing of protein expression can be controlled. In addition, expression vectors have sequences for so-called
Affinitätsepitope oder -proteine auf, die zum einen den spezifischen Nachweis der rekombinanten Fusions-Proteine mittels eines gegen das Affinitätsepitop gerichteten Affinity epitopes or proteins, on the one hand for the specific detection of the recombinant fusion proteins by means of a directed against the affinity epitope
Antikörpers erlauben, zum anderen wird die spezifische Antibody, on the other hand becomes the specific one
Aufreinigung über Affinitätschromatographie (IMAC) ermöglicht. Purification via affinity chromatography (IMAC) allows.
Beispielsweise wurden die Genprodukte einer cDNA- Expressionsbibliothek aus humanem fötalem Hirngewebe in dem bakteriellen Expressionssystem Escherichia coli im Hochdichte- Format auf einer Membran angeordnet und konnten erfolgreich mit unterschiedlichen Antikörpern gescreent werden. Es konnte gezeigt werden, dass der Anteil an Volllänge-Proteinen bei mindestens 66% liegt. Die rekombinanten Proteine aus For example, the gene products of a cDNA expression library of human fetal brain tissue in the bacterial expression system Escherichia coli in high density format were placed on a membrane and successfully screened with different antibodies. It could be shown that the proportion of full-length proteins is at least 66%. The recombinant proteins out
Expressionsbibliotheken konnten darüber hinaus im In addition, expression libraries have been published in
Hochdurchsatz exprimiert und aufgereinigt werden (Braun P., Hu, Y., Shen, B., Halleck, A., Koundinya, M., Harlow, E. and LaBaer, J. (2002) Proteome-scale purification of human High throughput can be expressed and purified (Braun P., Hu, Y., Shen, B., Halleck, A., Koundinya, M., Harlow, E. and LaBaer, J. (2002) Proteome-scale purification of human
proteins from bacteria. Proc Natl Acad Sei U S A, 99, 2654- 2659; Büssow (2000) supra; Lueking, A., Horn, M., Eickhoff, H., Büssow, K., Lehrach, H. and Walter, G. (1999) Protein microarrays for gene expression and antibody Screening. proteins from bacteria. Proc Natl Acad. USA, 99, 2654-2659; Büssow (2000) supra; Lueking, A., Horn, M., Eickhoff, H., Büssow, K., Lehrach, H. and Walter, G. (1999) Protein microarrays for gene expression and antibody screening.
Analytical Biochemistry, 270, 103-111) . Solche Proteinbiochips auf der Basis von cDNA-Expressionsbibliotheken sind Analytical Biochemistry, 270, 103-111). Such protein biochips are based on cDNA expression libraries
insbesondere Gegenstand der WO 99/57311 und WO 99/57312. in particular the subject matter of WO 99/57311 and WO 99/57312.
Ferner sind neben Antigen-präsentierenden Proteinbiochips ebenfalls Antikörper-präsentierende Anordnungen beschrieben (Lal et al (2002) Antibody arrays : An embryonic but rapidly growing technology, DDT, 7, 143-149; Kusnezow et al . (2003), Antibody microarrays: An evaluation of production parameters, Proteomics, 3, 254-264) . Further, in addition to antigen-presenting protein biochips, antibody-presenting arrangements are also described (Lal et al (2002) Antibody arrays: An embryonic but growing technology, DDT, 7, 143-149, Kusnezow et al., (2003) Antibody microarrays: An evaluation of production parameters, Proteomics, 3, 254-264).
Es besteht jedoch ein hohes Bedürfnis indikationsspezifische diagnostische Vorrichtungen, wie einen Proteinbiochip, However, there is a great need for indication-specific diagnostic devices, such as a protein biochip,
bereitzustellen . Die Aufgabe der vorliegenden Erfindung ist die Bereitstellung von verbesserten Markersequenzen und deren diagnostische to provide. The object of the present invention is to provide improved marker sequences and their diagnostic
Verwendung zur Behandlung von Systemischer Lupus Use for the treatment of systemic lupus
erythematodes . erythematosus.
Die Bereitstellung von spezifischen MarkerSequenzen erlaubt eine sichere Diagnose und Stratifizierung von Patienten mit Systemischer Lupus erythematodes, insbesondere mittels eines Proteinbiochips . The provision of specific marker sequences allows a safe diagnosis and stratification of patients with systemic lupus erythematosus, in particular by means of a protein biochip.
Daher betrifft die Erfindung die Verwendung von Therefore, the invention relates to the use of
MarkerSequenzen zur Diagnose von Systemischer Lupus Marker sequences for the diagnosis of systemic lupus
erythematodes, wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Erythematosus, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor or in each case a partial sequence or
Fragment davon (nachstehend: erfindungsgemäße Markersequenzen) an oder von einem zu untersuchenden Patienten bestimmt wird. Die erfindungsgemäßen MarkerSequenzen konnten mittels differentiellem Screenen von Proben und zwar gesunder Fragment thereof (hereinafter: marker sequences of the invention) to or from a patient to be examined is determined. The marker sequences of the invention could by means of differential screening of samples and healthy
Probanden mit Patientenproben mit Systemischer Lupus Subjects with patient samples with systemic lupus
erythematodes identifiziert werden. erythematosus are identified.
Hierbei konnten erstmals mittels Proteinbiochips (siehe For the first time protein biochips (see
Beispiele) diese erfindungsgemäßen Markersequenzen Examples) of these marker sequences according to the invention
identifiziert werden. be identified.
Der Begriff „Systemischer Lupus erythematodes (SLE)" betrifft eine systemische Autoimmunerkrankung aus der Gruppe der The term "systemic lupus erythematosus (SLE)" refers to a systemic autoimmune disease from the group of
Kollagenosen. Besonders charakteristisch für SLE (systemischer Lupus erythematodes) ist das so genannte Tissue diseases. Particularly characteristic of SLE (systemic lupus erythematodes) is the so-called
Schmetterlingserythem . Butterfly erythema.
Diagnosekriterien sind: Diagnostic criteria are:
1. Schmetterlingserythem 1. Butterfly erythema
2. diskoide Hautveränderungen 2. discoid skin lesions
3. Lichtempfindlichkeit 3. Photosensitivity
4. Schleimhautul zera (im Allgemeinen schmerzlos) 4. mucous membrane (generally painless)
5. Arthritis in mindestens zwei Gelenken 5. Arthritis in at least two joints
6. Serositis (Pleuritis od. Perikarditis) 6. Serositis (pleuritis or pericarditis)
7. Nierenbeteiligung (Proteinurie >0,5 g/d od. Zylinder) 7. Kidney involvement (proteinuria> 0.5 g / d or cylinder)
8. ZNS-Beteiligung (Krämpfe od. Psychose) 8. CNS involvement (convulsions or psychosis)
9. hämatologische Befunde (hämolyt. Anämie, Leuko- od. 9. haematological findings (haemolytic anemia, leuco-od.
Thrombopenie ) immunologische Befunde Anti-dsDNA-Antikörper , Anti-Sm-Antikörper , Antikardiolipin- Antikörper ; Thrombopenia) immunological findings Anti-dsDNA antibodies, anti-Sm antibodies, anti-cardiolipin antibodies;
11. antinukleäre Antikörper ohne Einnahme Lupus erythematodes auslösender Medikamente; Auswertung: Bei vier (drei) positiven Befunden gilt die 11. antinuclear antibodies without the use of lupus erythematosus triggering drugs; Evaluation: For four (three) positive findings, the
Diagnose als sicher (wahrscheinlich) (Definition z.B. nach Pschyrembel, de Gruyter, 261. Auflage (2007), Berlin).  Diagnosis as certain (probable) (definition, for example, according to Pschyrembel, de Gruyter, 261st edition (2007), Berlin).
Erfindungswesentlich ist, dass die Proben nicht aus üblichen Blutbanken entnommen werden, sondern von SLE-Patienten Essential to the invention is that the samples are not taken from conventional blood banks, but from SLE patients
sorgfältig ausgewählt wurden, die z.B. HIV und HCV negativ sind und insbesondere auf Infektionskrankheiten getestet wurden. Das aufwändige Probeselektionsverfahren erlaubt z.B. eine hinreichende vorteilhafte Abgrenzung von Erkrankungen mit SLE ähnlichen Symptomen. Auf diese Weise werden falsch- positive Ergebnisse ausgeschlossen, auch aufgrund der strengen bioinformatorischen Auswertung (siehe Beispiele) . carefully selected, e.g. HIV and HCV are negative and in particular have been tested for infectious diseases. The elaborate trial selection procedure allows e.g. a sufficient advantageous delineation of diseases with SLE-like symptoms. In this way false-positive results are excluded, also due to the strict bioinformatory evaluation (see examples).
Weiterhin erfolgt die Herstellung der Proteinbiochips mittels Normalisierung von mindestens 1.000, vorzugsweise 2.000 verschiedenen oder mehr Autoantigenen des Menschen, die nicht indikationsspezifisch für Systemischer Lupus erythematodes sind. Solche Autoantigene können z.B. aus Körperflüssigkeiten von Patienten anderer Autoimmun-Krankheiten gewonnen werden, wie z.B. Pankreaskrebs , Rheumatoide Arthritis, Prostata etc. Furthermore, the production of the protein biochips by means of normalization of at least 1,000, preferably 2,000 different or more autoantigens of humans, which are not specific to the indication for systemic lupus erythematosus. Such autoantigens may e.g. from body fluids of patients of other autoimmune diseases, e.g. Pancreatic cancer, rheumatoid arthritis, prostate etc.
Daher betrifft die Erfindung auch solche erfindungsgemäße indikationsspezifische Proteinbiochips zur Diagnose von Therefore, the invention also relates to such indication-specific protein biochips according to the invention for the diagnosis of
Systemischer Lupus erythematodes, wobei in einem weiteren Verifizierungsschritt, die auf dem Proteinbiochip  Systemic lupus erythematosus, wherein in a further verification step, on the protein biochip
repräsentierten Proteine mit Autoantikörpern aus Nicht- Systemischer Lupus erythematodes Patienten normalisiert werden und auf diese Weise falsch-positive Proteine entfernt werden können. Verbleibende nicht-falsch-positive Proteine können auf einem Proteinbiochip neu zusammengestellt werden, so genanntes Rearraying . Im Folgenden wird ein solch hergestellter Proteinbiochip „normalisierter Proteinbiochip" genannt. Ein solcher Represented proteins with autoantibodies from non-systemic lupus erythematosus patients normalized and in this way false-positive proteins can be removed. Remaining non-false positive proteins can be reassembled on a protein biochip, called rearraying. Hereinafter, such a prepared protein biochip is called a "normalized protein biochip."
normalisierter Proteinbiochip erweist sich als besonders vorteilhaft zur Identifizierung von den erfindungsgemäßen spezifischen Markersequenzen, da andere ähnliche Normalized protein biochip proves to be particularly advantageous for the identification of the specific marker sequences according to the invention, since others are similar
autoimmunrelevante Markersequenzen ausgeschlossen werden können. Dies ist konträr zur Lehre aus WO2003/090694. autoimmune relevant marker sequences can be excluded. This is contrary to the teaching of WO2003 / 090694.
Diese Vorgehensweise erlaubt ebenfalls den Ausschluss von Autoantikörpern, die auf E. coli positiv sind. Dies ist eine weitere qualitative Verbesserung, da Autoantikörper This approach also allows the exclusion of autoantibodies that are positive for E. coli. This is another qualitative improvement since autoantibodies
ausgeschlossen werden können, die z.B. gegen E. coli can be excluded, e.g. against E. coli
Darmbakterien im Menschen gerichtet sind. Infolge dessen können vorteilhaft bei einem verbesserten Signal/Rausch  Intestinal bacteria are directed in humans. As a result, can advantageously with an improved signal / noise
Verhältnis neue MarkerSequenzen identifiziert werden. Ratio of new marker sequences can be identified.
In einer weiteren bevorzugten Ausführungsform werden daher mindestens 2 bis 5 oder 10, vorzugsweise 30 bis 50 In a further preferred embodiment, therefore, at least 2 to 5 or 10, preferably 30 to 50
MarkerSequenzen oder 50 bis 100 oder mehr MarkerSequenzen an oder von einem zu untersuchenden Patienten bestimmt.  Marker sequences or 50 to 100 or more marker sequences to or from a patient to be examined.
In einer weiteren Ausführungsform der Erfindung können die erfindungsgemäßen MarkerSequenzen ebenfalls mit bekannten Biomarkern für diese Indikation kombiniert, ergänzt oder erweitert werden. In a further embodiment of the invention, the marker sequences according to the invention can also be combined, supplemented or extended with known biomarkers for this indication.
In einer bevorzugten Ausführungsform erfolgt die Bestimmung der MarkerSequenzen außerhalb des menschlichen Körpers und die Bestimmung erfolgt in einer ex vivo / in vitro Diagnose. In einer weiteren Ausführungsform der Erfindung betrifft die Erfindung die Verwendung von MarkerSequenzen als Diagnostika, wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon ist . In a preferred embodiment, the determination of the marker sequences takes place outside the human body and the determination is made in an ex vivo / in vitro diagnosis. In a further embodiment of the invention, the invention relates to the use of marker sequences as diagnostics, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor or in each case a partial sequence or fragment thereof.
Ferner betrifft die Erfindung ein Verfahren zur Diagnose von Systemischer Lupus erythematodes, wobei a.) mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon auf einem festen Träger aufgebracht wird und b.) mit Körperflüssigkeit oder Furthermore, the invention relates to a method for the diagnosis of systemic lupus erythematosus, wherein a.) At least one marker sequence of a cDNA selected from the group SEQ 1-716 or a respective coding protein or a partial sequence or fragment thereof is applied to a solid support, and b.) with body fluid or
Gewebeauszug eines Patienten in Kontakt gebracht wird und c.) der Nachweis einer Wechselwirkung der Körperflüssigkeit oder Gewebeauszug mit den Markersequenzen aus a.) erfolgt. Tissue extract of a patient is brought into contact and c.) The detection of an interaction of the body fluid or tissue extract with the marker sequences from a.) Is done.
Daher betrifft die Erfindung ebenfalls Diagnostika zur Therefore, the invention also relates to diagnostics for
Diagnose von Systemischer Lupus erythematodes jeweils Diagnosis of Systemic Lupus Erythematosus respectively
ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder selected from the group SEQ 1-716 or in each case a protein coding for it or in each case a partial sequence or
Fragment davon. Fragment of it.
Der Nachweis einer solchen Wechselwirkung kann beispielsweise durch eine Sonde, insbesondere durch einen Antikörper The detection of such an interaction can, for example, by a probe, in particular by an antibody
erfolgen . respectively .
Daher betrifft die Erfindung ebenfalls die Aufgabe eine diagnostische Vorrichtung oder einen Assay, insbesondere einen Proteinbiochip, bereitzustellen, der für die Systemischer Lupus erythematodes eine Diagnose oder Untersuchung erlaubt. Therefore, the invention also has the object of providing a diagnostic device or an assay, in particular a protein biochip, which permits diagnosis or examination for systemic lupus erythematosus.
Ferner betrifft die Erfindung ein Verfahren zum Furthermore, the invention relates to a method for
Stratifizieren, insbesondere zur Risikostratifizierung und / oder Therapiesteuerung eines Patienten mit Systemischer Lupus erythematodes, wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein an einem zu untersuchenden Patienten bestimmt wird. Stratify, in particular for risk stratification and / or therapy control of a patient with systemic lupus erythematosus, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor is determined on a patient to be examined.
Ferner umfasst ist die Stratifizierung der Patienten mit Systemischer Lupus erythematodes in neue oder etablierte Subgruppen der Systemischer Lupus erythematodes, sowie die sinnvolle Auswahl von Patientengruppen für die klinische Entwicklung von neuen Therapeutika. Der Begriff Also included is the stratification of patients with systemic lupus erythematosus into new or established subgroups of systemic lupus erythematosus, as well as the judicious selection of patient groups for the clinical development of new therapeutics. The term
Therapiesteuerung umfasst ebenfalls die Einteilung von  Therapy control also includes the classification of
Patienten in Responder und Nicht-Responder bezüglich einer Therapie oder dessen Therapieverlauf. Patients in responders and non-responders with respect to therapy or its course of therapy.
„Diagnose" im Sinne dieser Erfindung bedeutet die positive Feststellung der Systemischer Lupus erythematodes mittels der erfindungsgemäßen MarkerSequenzen sowie die Zuordnung der Patienten zur Erkrankung an Systemischer Lupus erythematodes. Der Begriff der Diagnose umfasst die medizinische Diagnostik und diesbezügliche Untersuchungen, insbesondere die in-vitro Diagnostik und Labordiagnostik, ebenfalls Proteomics und Nukleinsäureblots . Weitere Untersuchungen können zur "Diagnosis" in the sense of this invention means the positive determination of the systemic lupus erythematosus by means of the marker sequences according to the invention and the assignment of the patients to the disease of systemic lupus erythematosus.The term diagnosis includes medical diagnostics and related investigations, in particular in vitro diagnostics and Laboratory diagnostics, also proteomics and nucleic acid blots
Absicherung und zum Ausschluss anderer Krankheiten vonnöten sein. Daher umfasst der Begriff Diagnose ebenfalls die Protection and exclusion of other diseases. Therefore, the term diagnosis also includes the
Differentialdiagnose von Systemischer Lupus erythematodes mittels der erfindungsgemäßen Markersequenzen sowie die Differential diagnosis of systemic lupus erythematosus by means of the marker sequences according to the invention and the
Prognose der Systemischer Lupus erythematodes. Prognosis of Systemic Lupus Erythematosus.
„Stratifizieren (auch: Stratifikation) oder Therapiesteuerung im Sinne dieser Erfindung bedeutet, dass das erfindungsgemäße Verfahren Entscheidungen zur Behandlung und Therapie des Patienten erlaubt, sei es Hospitalisierung des Patienten, Einsatz, Wirkung und / oder Dosierung eines oder mehrerer Arzneimittel, eine therapeutische Maßnahme oder die "Stratification (or stratification) or therapy control in the sense of this invention means that the method according to the invention allows decisions for the treatment and therapy of the patient, be it hospitalization of the patient, Use, effect and / or dosage of one or more drugs, a therapeutic measure or the
Überwachung eines Krankheitsverlaufes sowie Therapieverlauf bzw. Ätiologie oder Klassifizierung einer Erkrankung, z.B. in einen neuen oder bestehenden Subtyp oder die Differenzierung von Krankheiten und dessen Patienten. Surveillance of disease progression as well as treatment course or etiology or classification of a disease, e.g. into a new or existing subtype or the differentiation of diseases and their patients.
In einer weiteren Ausführungsform der Erfindung umfasst der Begriff „Stratifizierung" insbesondere die In a further embodiment of the invention, the term "stratification" includes in particular the
Risikostratifizierung mit der Prognose eines „outcome" eines nachteiligen gesundheitlichen Ereignisses.  Risk stratification with the prognosis of an "outcome" of an adverse health event.
Im Rahmen dieser Erfindung wird unter „Patient" ein beliebiger Proband - Mensch oder Säugetier - verstanden, mit der Maßgabe, dass der Proband auf Systemischer Lupus erythematodes In the context of this invention, "patient" is understood to mean any subject - human or mammal - with the proviso that the subject is on systemic lupus erythematosus
untersucht wird. Der Begriff „MarkerSequenzen" im Sinne dieser Erfindung bedeutet, dass die cDNA oder das jeweils daraus erhältliche Polypeptid oder Protein signifikant für Systemischer Lupus erythematodes sind. Beispielsweise können die cDNA oder das jeweils daraus erhältliche Polypeptid oder Protein eine is examined. The term "marker sequences" in the sense of this invention means that the cDNA or the respective polypeptide or protein obtainable therefrom are significant for systemic lupus erythematosus For example, the cDNA or the respective polypeptide or protein obtainable therefrom can be a
Wechselwirkung mit Substanzen aus der Körperflüssigkeit oder Gewebeauszug eines Patienten mit Systemischer Lupus Interaction with substances from the body fluid or tissue extract of a patient with systemic lupus
erythematodes aufweisen (z.B. Antigen (Epitop) / Antikörper (Paratop) Wechselwirkung) . Im Sinne der Erfindung bedeutet „wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendeserythematosus (e.g., antigen (epitope) / antibody (paratope) interaction). For the purposes of the invention, "at least one marker sequence of a cDNA selected from the group SEQ 1-716 or in each case one coding for it
Protein oder jeweils einer Teilsequenz oder Fragment davon an oder von einem zu untersuchenden Patienten bestimmt wird", dass eine Wechselwirkung zwischen der Körperflüssigkeit oder Gewebeauszuges eines Patienten und den erfindungsgemäßen Protein or in each case a partial sequence or fragment thereof to or from a patient to be examined "is determined that an interaction between the body fluid or tissue extract of a patient and the inventive
MarkerSequenzen nachgewiesen wird. Eine solche Wechselwirkung ist z.B. eine Bindung, insbesondere eine bindende Substanz an mindestens einer erfindungsgemäßen Markersequenz oder im Fall einer cDNA die Hybridisierung mit einer geeigneten Substanz unter gewählten Bedingungen, insbesondere stringenten Marker sequences is detected. Such an interaction is for example a bond, in particular a binding substance to at least one marker sequence according to the invention or in the case of a cDNA hybridization with a suitable substance under selected conditions, in particular stringent
Bedingungen (z.B. wie üblich definiert in J. Sambrook, E.F. Fritsch, T. Maniatis (1989), Molecular cloning: A laboratory manual, 2nd Edition, Cold Spring Habor Laboratory Press, Cold Spring Habor, USA oder Ausubel, "Current Protocols in Conditions (e.g., as defined in J. Sambrook, E. F. Fritsch, T. Maniatis (1989), Molecular cloning: A laboratory manual, 2nd Edition, Cold Spring Habor Laboratory Press, Cold Spring Habor, USA or Ausubel, "Current Protocols in
Molecular Biology", Green Publishing Associates and Wiley Interscience , N.Y. (1989)). Ein Beispiel für stringente Molecular Biology, Green Publishing Associates and Wiley Interscience, N.Y. (1989)). An example of stringent
Hybridisierungsbedingungen ist: Hybridisierung in 4 x SSC bei 65° C (alternativ in 50% Formamid und 4 X SSC bei 42° C) , gefolgt von mehreren Waschschritten in 0,1 x SSC bei 65°C für insgesamt etwa eine Stunde. Ein Beispiel für wenig stringente Hybridisierungsbedingungen ist Hybridisierung in 4 x SSC bei 37° C, gefolgt von mehreren Waschschritten in 1 x SSC bei Raumtemperatur .  Hybridization conditions are: hybridization in 4 x SSC at 65 ° C (alternatively in 50% formamide and 4X SSC at 42 ° C), followed by several washes in 0.1 x SSC at 65 ° C for a total of about one hour. An example of less stringent hybridization conditions is hybridization in 4 x SSC at 37 ° C, followed by several washes in 1 x SSC at room temperature.
Solche Substanzen sind erfindungsgemäß Bestandteil einer Körperflüssigkeit, insbesondere Blut, Vollblut, Blutplasma, Blutserum, Patientenserum, Urin, Cerebrospinalflüssigkeit ,Such substances are part of a body fluid according to the invention, in particular blood, whole blood, blood plasma, blood serum, patient serum, urine, cerebrospinal fluid,
Synovialflüssigkeit oder eines Gewebeauszuges des Patienten. Synovial fluid or a tissue extract of the patient.
In einer weiteren Ausführungsform der Erfindung können jedoch die erfindungsgemäßen Markersequenzen in einer signifikant höheren oder niedrigeren Expressionsrate oder Konzentration vorliegen, welches auf Systemischer Lupus erythematodes hinweist. Hierbei kann mittels Proteomics oder In a further embodiment of the invention, however, the marker sequences according to the invention may be present in a significantly higher or lower expression rate or concentration, which indicates systemic lupus erythematosus. This can be done by means of proteomics or
Nukleinsäureblots die relativen Expressionsraten krank / gesund der erfindungsgemäßen Markersequenzen für Systemischer Lupus erythematodes bestimmt werden. Die MarkerSequenzen verfügen in einer weiteren Ausführungsform der Erfindung über ein Erkennungssignal, welches an die zu bindende Substanz adressiert ist (z.B. Antikörper, Nucleic acid blots the relative expression rates ill / healthy of the marker sequences according to the invention for systemic lupus erythematosus are determined. In a further embodiment of the invention, the marker sequences have a recognition signal which is addressed to the substance to be bound (for example antibodies,
Nukleinsäure) . Erfindungsgemäß bevorzugt ist für ein Protein das Erkennungssignal ein Epitop und / oder Paratop und / oder Hapten und für eine cDNA eine Hybridisierungs- oder Nucleic acid). According to the invention, for a protein, the recognition signal is preferably an epitope and / or paratope and / or hapten and, for a cDNA, a hybridization or hybridization protein
Bindungsregion . Binding region.
Die erfindungsgemäßen MarkerSequenzen sind ebenfalls The marker sequences of the invention are also
Gegenstand der Tabelle A und können durch den jeweilig zitierten Datenbankeintrag (auch mittels Internet: The subject of Table A and can by the respective cited database entry (also via Internet:
http://www.ncbi.nlm.nih.gov/) eindeutig identifiziert werden (siehe in Tabelle A: dort Accession No . ) , siehe ebenfalls das zugehörige Sequenzprotokoll. http://www.ncbi.nlm.nih.gov/) are clearly identified (see Table A: Accession No. there), see also the corresponding sequence listing.
Daher betrifft die Erfindung ebenfalls die Volllängesequenzen der erfindungsgemäßen Marker und zwar wie in Tabelle A über den bekannten Datenbankeintrag definiert, nachstehend SEQ la- 716a (cDNA) genannt. Therefore, the invention also relates to the full-length sequences of the markers according to the invention and indeed as defined in Table A on the known database entry, hereinafter called SEQ -716a (cDNA).
Weiterhin umfasst sind daher ebenfalls analoge Furthermore, therefore, also include analog
Ausführungsformen von SEQ la-716a zu den MarkerSequenzen SEQ 1-716, wie z.B. in den Ansprüchen dargelegt, da die  Embodiments of SEQ ID NO: 716a to the marker sequences SEQ 1-716, e.g. set forth in the claims, since the
erfindungsgemäßen SEQ 1-716 wiederum Teilsequenzen, zumindest mit hoher Homologie, darstellen. Die spezifischen SEQ 1-716 according to the invention again represent partial sequences, at least with high homology. The specific ones
MarkerSequenzen SEQ 1-716 sind jedoch erfindungsgemäß However, marker sequences SEQ 1-716 are in accordance with the invention
bevorzugt . Erfindungsgemäß umfassen die MarkerSequenzen auch solche Modifikationen der cDNA-Sequenz und der entsprechenden prefers . According to the marker sequences also include such modifications of the cDNA sequence and the corresponding
Aminosäuresequenz, wie chemische Modifikation, wie Amino acid sequence, such as chemical modification, such as
Citrullinierung, Acetylierung, Phosphorylierung, Citrullination, acetylation, phosphorylation,
Glykosilierung oder polyA-Strang und weitere dem Fachmann einschlägig bekannte Modifikationen. In einer weiteren Ausführungsform der Erfindung sind ebenfalls Teilsequenzen oder Fragmente der erfindungsgemäßen Glycation or polyA strand and other modifications known to those skilled in the art. In a further embodiment of the invention are also partial sequences or fragments of the invention
MarkerSequenzen umfasst. Insbesondere solche Teilsequenzen, die eine Identität von 95%, 90 %, insbesondere 80% oder 70 % mit den erfindungsgemäßen MarkerSequenzen aufweisen. Includes marker sequences. In particular, those partial sequences which have an identity of 95%, 90%, in particular 80% or 70% with the marker sequences according to the invention.
Teilsequenzen sind ebenfalls solche Sequenzen, die 50 bis 100 Nukleotide, 70-120 Nukleotide einer Sequenz der SEQ 1-716 aufweisen, oder davon erhältliche Peptide. Partial sequences are also those sequences having 50 to 100 nucleotides, 70-120 nucleotides of a sequence of SEQ 1-716, or peptides obtainable therefrom.
„Teilsequenzen oder Fragmente" der erfindungsgemäßen "Partial sequences or fragments" of the invention
MarkerSequenzen sind funktionell definiert und umfassen solche Sequenzen, die die gleiche erfindungsgemäße diagnostische Funktion aufweisen. Marker sequences are functionally defined and include those sequences which have the same inventive diagnostic function.
In einer weiteren Ausführungsform kann die jeweilige In a further embodiment, the respective
Markersequenz in unterschiedlichen Mengen in einen oder mehreren Bereichen auf einem festen Träger repräsentiert sein. Dies erlaubt eine Variation der Sensitivität . Die Bereiche können jeweils eine Gesamtheit von Markersequenzen aufweisen, d.h. eine genügende Zahl an verschiedenen Markersequenzen, insbesondere 2 bis 5 oder 10 oder mehr und ggfs. weiteren Nukleinsäuren und/oder Proteinen, insbesondere Biomarker. Marker sequence can be represented in different amounts in one or more areas on a solid support. This allows a variation of the sensitivity. The regions may each comprise a total of marker sequences, i. a sufficient number of different marker sequences, in particular 2 to 5 or 10 or more and optionally further nucleic acids and / or proteins, in particular biomarkers.
Bevorzugt sind jedoch mindestens 96 bis 25.000 (numerisch) oder mehr aus verschiedenen oder gleichen Markersequenzen und weiteren Nukleinsäuren und/oder Proteinen, insbesondere However, at least 96 to 25,000 (numerically) or more from different or identical marker sequences and further nucleic acids and / or proteins, in particular, are preferred
Biomarker. Weiterhin bevorzugt sind mehr als 2.500, besonders bevorzugt 10.000 oder mehr verschiedene oder gleiche Biomarkers. Further preferred are more than 2,500, more preferably 10,000 or more different or the same
MarkerSequenzen und ggfs. weitere Nukleinsäuren und/oder  Marker sequences and, if necessary, further nucleic acids and / or
Proteinen, insbesondere Biomarker. Proteins, especially biomarkers.
Ein weiterer Gegenstand der Erfindung betrifft eine Anordnung von MarkerSequenzen enthaltend mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein. Vorzugsweise enthält die Another object of the invention relates to an array of marker sequences containing at least one marker sequence a cDNA selected from the group SEQ 1-716 or in each case a protein coding therefor. Preferably, the
Anordnung mindestens 2 bis 5 oder 10, vorzugsweise 30 bis 50 MarkerSequenzen oder 50 bis 100 oder mehr MarkerSequenzen . Arrangement of at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more marker sequences.
Im Rahmen dieser Erfindung bedeutet „Anordnung" synonym „Array" und sofern dieser „Array" zur Identifizierung von Substanzen an Markersequenzen verwendet wird, ist hierunter ein „Assay" oder eine diagnostische Vorrichtung zu verstehen. In einer bevorzugten Ausführungsform ist die Anordnung derart gestaltet, dass die auf der Anordnung repräsentierten In the context of this invention, "arrangement" synonymously means "array" and insofar as this "array" is used to identify substances on marker sequences, this is to be understood as meaning an "assay" or a diagnostic device. In a preferred embodiment, the arrangement is designed such that those represented on the assembly
MarkerSequenzen in Form eines Gitters auf einem festen Träger vorliegen. Ferner sind solche Anordnungen bevorzugt, die eine hochdichte (high-density ) Anordnung von Proteinbindern Marker sequences are in the form of a grid on a solid support. Furthermore, such arrangements are preferred which include a high density array of protein binders
erlauben und die Markersequenzen gespottet werden. Solche hochdichte gespotteten Anordnungen sind beispielsweise in der WO 99/57311 und WO 99/57312 offenbart und können vorteilhaft in einem robotergestützten automatisierten High-Throughput Verfahren zur Anwendung kommen. allow and the marker sequences are spotted. Such high density spotted assemblies are disclosed, for example, in WO 99/57311 and WO 99/57312, and may be advantageously used in a robotic automated high throughput method.
Im Rahmen dieser Erfindung umfasst jedoch der Begriff „Assay" oder diagnostische Vorrichtung ebenfalls solche In the context of this invention, however, the term "assay" or diagnostic device also includes such
Ausführungsformen einer Vorrichtung, wie ELISA, Bead-based Assay, Line Assay, Western Blot, immunchromatographische Embodiments of a device such as ELISA, bead-based assay, line assay, Western blot, immunochromatographic
Verfahren (z.B. so genannte Lateral Flow Immunoassays) oder ähnliche immunologische Single- oder Multiplex- Nachweisverfahren . Ein Proteinbiochip im Sinne dieser Methods (e.g., so-called lateral flow immunoassays) or similar immunological single or multiplex detection methods. A protein biochip in the sense of this
Erfindung ist die systematische Anordnung von Proteinen auf einem festen Träger. Invention is the systematic arrangement of proteins on a solid support.
Die MarkerSequenzen der Anordnung sind auf einen festen Träger fixiert, vorzugsweise jedoch gespottet oder immobilisiert gar aufgedruckt, d.h. reproduzierbar aufgebracht. Ein oder mehrere MarkerSequenzen können mehrfach in der Gesamtheit aller The marker sequences of the assembly are fixed to a solid support, but preferably spotted or immobilized imprinted, ie applied reproducible. One or more marker sequences can be duplicated in the totality of all
MarkerSequenzen präsent sein und in unterschiedlichen Mengen bezogen auf einem Spot vorliegen. Ferner können die Marker sequences are present and available in different quantities based on a spot. Furthermore, the
MarkerSequenzen auf dem festen Träger standardisiert sein (z.B. mittels serieller Verdünnungsreihen von z.B. Marker sequences on the solid support may be standardized (e.g., by serial dilution series of e.g.
Humanglobulinen als interne Kaiibratoren zur Human globulins as internal calibrators for
Datennormalisierung und quantitativen Auswertung) . Data normalization and quantitative evaluation).
Daher betrifft die Erfindung einen Assay oder Proteinbiochip bestehend aus einer Anordnung enthaltend erfindungsgemäße MarkerSequenzen . Therefore, the invention relates to an assay or protein biochip consisting of an array containing marker sequences according to the invention.
In einer weiteren Ausführungsform liegen die Markersequenzen als Clone vor. Solche Clone können beispielsweise mittels einer erfindungsgemäßen cDNA-Expressionsbibliothek erhalten werden (Büssow et al . 1998 (supra) ) . In einer bevorzugten Ausführungsform werden solche Expressionsbibliotheken In a further embodiment, the marker sequences are present as clones. Such clones can be obtained, for example, by means of a cDNA expression library according to the invention (Büssow et al., 1998 (supra)). In a preferred embodiment, such expression libraries become
enthaltend Clone mittels Expressionsvektoren aus einer containing clones by means of expression vectors from a
exprimierenden cDNA Bibliothek bestehend aus den cDNA expressing cDNA library consisting of the cDNA
MarkerSequenzen erhalten. Diese Expressionsvektoren enthalten vorzugsweise induzierbare Promotoren. Die Induktion der Obtained marker sequences. These expression vectors preferably contain inducible promoters. The induction of
Expression kann z.B. mittels eines Induktors, solche wie IPTG, erfolgen. Geeignete Expressionsvektoren sind beschrieben in Terpe et al . (Terpe T Appl Microbiol Biotechnol. 2003 Jan; 60(5) : 523-33) . Expressionsbibliotheken sind dem Fachmann bekannt, diese können nach Standardwerken, wie Sambrook et al, "Molecular Cloning, A laboratory handbook, 2nd edition (1989), CSH press, Cold Spring Harbor, New York hergestellt werden. Weiterhin bevorzugt sind solche Expressionsbibliotheken, die  Expression can e.g. by means of an inductor, such as IPTG. Suitable expression vectors are described in Terpe et al. (Terpe T Appl Microbiol Biotechnol 2003 Jan; 60 (5): 523-33). Expression libraries are known to the person skilled in the art, these can be prepared according to standard works, such as Sambrook et al., Molecular Cloning, Laboratory Handbook, 2nd edition (1989), CSH press, Cold Spring Harbor, New York Further preferred are such expression libraries
gewebespezifisch sind (z.B. humanes Gewebe, insbesondere humane Organe) . Ferner sind erfindungsgemäß ebenfalls solche Expressionsbibliotheken mit eingeschlossen, die mittels exon- trapping erhalten werden können. Statt Expressionsbibliothek kann synonym von einer Expressionsbank gesprochen werden. Weiterhin bevorzugt sind Proteinbiochips oder entsprechende Expressionsbibliotheken, die keine Redundanz aufweisen (so genannte: Uniclone®-Bibliothek ) und nach den Lehren der WO 99/57311 und WO 99/57312 beispielsweise hergestellt werden können. Diese bevorzugten Uniclone- Bibliotheken weisen einen hohen Anteil an nicht-fehlerhaften vollständig exprimierten Proteinen einer cDNA-Expressionsbibliothek auf. are tissue specific (eg human tissue, in particular human organs). Furthermore, such expression libraries are also included according to the invention, which can be obtained by exon trapping. Instead of expression library can be spoken synonymously from an expression bank. Also preferred are protein biochips or corresponding expression libraries which have no redundancy (so-called: Uniclone® library) and can be prepared, for example, according to the teachings of WO 99/57311 and WO 99/57312. These preferred Uniclone libraries have a high content of non-defective, fully expressed proteins of a cDNA expression library.
Im Rahmen dieser Erfindung können die Clone ebenfalls nicht abschließend solche sein, wie transformierte Bakterien, rekombinante Phagen oder transformierte Zellen von Säugern, Insekten, Pilzen, Hefen oder Pflanzen. Also within the scope of this invention, the clones may not be such as transformed bacteria, recombinant phage or transformed cells of mammals, insects, fungi, yeasts or plants.
Die Clone werden auf einen festen Träger fixiert, gespottet oder immobilisiert. The clones are fixed on a solid support, spotted or immobilized.
Daher betrifft die Erfindung eine Anordnung, wobei die Therefore, the invention relates to an arrangement, wherein the
MarkerSequenzen als Clone vorliegen. Zusätzlich können die Markersequenzen in der jeweiligen Form in Form eines Fusionsproteins vorliegen, welches Marker sequences are present as clones. In addition, the marker sequences may be in the form of a fusion protein in the particular form
beispielsweise mindestens ein Affinitätsepiptop oder "Tag" enthält. Der Tag kann ein solcher sein wie wie c-myc, His-Tag, Arg-tag, FLAG, alkalische Phosphatase, V5-Tag, T7-Tag oder Strep-Tag, HAT-tag, NusA, S-tag, SBP-tag, Thioredoxin, DsbA, ein Fusionsprotein, vorzugsweise eine Cellulose-bindende For example, at least one affinity epipope or "tag" contains. The tag may be one such as c-myc, His-tag, Arg-tag, FLAG, alkaline phosphatase, V5 tag, T7 tag or Strep tag, HAT tag, NusA, S-tag, SBP tag , Thioredoxin, DsbA, a fusion protein, preferably a cellulose-binding one
Domäne, grünfluoreszierendes Protein, Maltose bindendes Domain, green fluorescent protein, maltose binding
Protein, calmodulin-bindendes Protein, Glutathione S- transferase oder lacZ enthalten. In sämtlichen Ausführungsformen umfasst der Begriff "fester Träger" Ausführungen wie einen Filter, eine Membran, ein magnetisches oder Fluorophor-markiertes Kügelchen, ein Protein, calmodulin-binding protein, glutathione S-transferase or lacZ. In all embodiments, the term "solid support" includes embodiments such as a filter, a membrane, a magnetic or fluorophore-labeled bead
Silizium-Wafer , Glas, Metall, Kunststoff, ein Chip, ein massenspektrometrisches Target oder eine Matrix. Ein Filter ist jedoch erfindungsgemäß bevorzugt. Silicon wafer, glass, metal, plastic, a chip, a mass spectrometric target or a matrix. However, a filter is preferred according to the invention.
Als Filter ist weiterhin PVDF, Nitrocellulose oder Nylon bevorzugt (z.B. Immobilon P Millipore, Protran Whatman, Hybond N+ Amersham) . Also preferred as the filter is PVDF, nitrocellulose or nylon (e.g., Immobilon P Millipore, Protran Whatman, Hybond N + Amersham).
In einer weiteren bevorzugten Ausführungsform der In a further preferred embodiment of the
erfindungsgemäßen Anordnung entspricht diese einem Gitter, dass die Größenordnung einer Mikrotiterplatte (8-12 Wells Streifen, 96 Wells, 384 Wells oder mehr), eines Silizium- Wafers, eines Chips, eines massenspektrometrischen Targets oder einer Matrix besitzt. According to the invention, this corresponds to a grid having the order of a microtiter plate (8-12 wells strips, 96 wells, 384 wells or more), a silicon wafer, a chip, a mass spectrometric target or a matrix.
In einer weiteren Ausführungsform betrifft die Erfindung einen Assay oder Proteinbiochip zum Identifizieren und In a further embodiment, the invention relates to an assay or protein biochip for identifying and
Charakterisieren einer Substanz für Systemischer Lupus erythematodes, dadurch gekennzeichnet, dass eine Characterizing a substance for systemic lupus erythematosus, characterized in that a
erfindungsgemäße Anordnung oder Assay mit a.) mindestens einer zu untersuchenden Substanz in Kontakt gebracht wird und b.) ein Bindungserfolg nachgewiesen wird. inventive arrangement or assay with a.) At least one substance to be examined is brought into contact and b.) A binding success is detected.
Ferner betrifft die Erfindung ein Verfahren zum Identifizieren und Charakterisieren einer Substanz für Systemischer Lupus erythematodes, dadurch gekennzeichnet, dass eine Furthermore, the invention relates to a method for identifying and characterizing a substance for systemic lupus erythematosus, characterized in that a
erfindungsgemäße Anordnung oder Assay mit a.) mindestens einer zu untersuchenden Substanz in Kontakt gebracht wird und b.) ein Bindungserfolg nachgewiesen wird. Die zu untersuchende Substanz kann ein beliebiges natives oder nicht-natives Biomolekül, ein synthetisches chemisches inventive arrangement or assay with a.) At least one substance to be examined is brought into contact and b.) A binding success is detected. The substance to be tested may be any native or non-native biomolecule, a synthetic chemical
Molekül, eine Mischung oder eine Substanzbibliothek sein. Be a molecule, a mixture or a substance library.
Nachdem die zu untersuchende Substanz eine Markersequenz kontaktiert, erfolgt die Auswertung des Bindungserfolges, die beispielsweise unter Verwendung mit handelsüblicher Image- Analyse Software (GenePix Pro (Axon Laboratories), Aida After the substance to be examined contacts a marker sequence, the evaluation of the binding success, for example, using commercially available image analysis software (GenePix Pro (Axon Laboratories), Aida
(Raytest), ScanArray (Packard Bioscience) erfolgt. (Raytest), ScanArray (Packard Bioscience).
Die Visualisierung erfindungsgemäßer Protein-Protein- Wechselwirkungen (z.B. Protein an Markersequenz, wie The visualization of protein-protein interactions of the invention (e.g., protein to marker sequence, such as
Antigen/Antikörper ) oder entsprechende „Mittel zum Nachweis des Bindungserfolges" kann beispielsweise mittels  Antigen / antibody) or corresponding "means for detecting the binding success" can, for example, by means of
Fluoresenzmarkierung, Biotiniylierung, Radio-Isotopen- Markierung oder kolloidale Gold- oder Latex-Partikel- Markierung in üblicher Weise erfolgen. Ein Nachweis von gebundenen Antikörpern erfolgt mit Hilfe von sekundären Fluorescent labeling, biotinization, radio-isotopic labeling or colloidal gold or latex particle marking in a conventional manner. Detection of bound antibodies takes place with the help of secondary antibodies
Antikörpern, die mit handelsüblichen Reportermolekülen Antibodies with commercial reporter molecules
markiert sind (z.B. Cy-, Alexa-, Dyomics, FITC- oder ähnliche Fluoreszenzfarbstoffe, , kolloidale Gold- oder Latex- Partikel), oder mit Reporter-Enzymen wie alkalischer (e.g., Cy, Alexa, Dyomics, FITC or similar fluorescent dyes, colloidal gold or latex particles) or with reporter enzymes such as alkaline
Phosphatase, Meerrettichperoxidase, usw. und den Phosphatase, horseradish peroxidase, etc. and the
entsprechenden colorimetrischen, fluores zenten oder corresponding colorimetric, fluorescents or
chemolumines zenten Substraten. Eine Auslesung erfolgt z.B. mittels eines Microarray-Laserscanners , einer CCD-Kamera oder visuell . chemoluminescent substrates. A readout is e.g. by means of a microarray laser scanner, a CCD camera or visually.
In einer weiteren Ausführungsform betrifft die Erfindung ein Arzneimittel / Wirkstoff oder Prodrug für Systemischer Lupus erythematodes entwickelt und erhältlich durch den Einsatz des erfindungsgemäßen Assays oder Proteinbiochip. Daher betrifft die Erfindung ebenfalls die Verwendung einer erfindungsgemäßen Anordnung oder einem Assay zum Screenen von Wirkstoffen für Systemischer Lupus erythematodes. In a further embodiment, the invention relates to a drug / drug or prodrug developed for systemic lupus erythematosus and obtainable by the use of the assay or protein biochip according to the invention. Therefore, the invention also relates to the use of an inventive arrangement or an assay for screening agents for systemic lupus erythematosus.
Daher betrifft die Erfindung in einer weiteren Ausführungsform ebenfalls ein Target zur Behandlung und Therapie von Therefore, in another embodiment, the invention also relates to a target for the treatment and therapy of
Systemischer Lupus erythematodes, jeweils ausgewählt aus der Gruppe SEQ 1 - 716 oder jeweils ein dafür kodierendes Protein.  Systemic lupus erythematosus, each selected from the group SEQ 1-716 or in each case a protein coding therefor.
In einer weiteren Ausführungsform betrifft die Erfindung ebenfalls die Verwendung der erfindungsgemäßen In a further embodiment, the invention also relates to the use of the invention
Markersequenzen, vorzugsweise in Form einer Anordnung, alsMarker sequences, preferably in the form of an arrangement, as
Affinitätsmaterial zur Durchführung einer Apherese bzw. iwS . einer Blutwäsche, wobei Substanzen aus Körperflüssigkeiten eines Patienten mit Systemischer Lupus erythematodes, wie Blut oder Plasma, an die erfindungsgemäßen Markersequenzen binden und folglich der Körperflüssigkeit selektiv entzogen werden können . Affinity material for performing an apheresis or iwS. a blood wash, wherein substances from body fluids of a patient with systemic lupus erythematosus, such as blood or plasma, bind to the marker sequences according to the invention and consequently the body fluid can be selectively withdrawn.
Beispiele und Figuren: Examples and figures:
Zehn oder mehr Patientenproben wurden individuell gegen eine cDNA Expressionsbibliothek gescreent. Die Systemischer Lupus erythematodes -spezifischen Expressionsklone wurden ermittelt durch einen Vergleich mit zehn oder mehr gesunden Proben. Die Identität der Markersequenzen wurde durch DNA-Sequenzierung ermittelt . Ten or more patient samples were individually screened against a cDNA expression library. The systemic lupus erythematosus-specific expression clones were determined by comparison with ten or more healthy samples. The identity of the marker sequences was determined by DNA sequencing.
In Figur 1 wird das differentielle Screenen zwischen zwei Proteinbiochips aus jeweils einer cDNA-Expressionsbank eines Patienten und einem gesunden Probanden gezeigt. Die FIG. 1 shows the differential screening between two protein biochips from in each case one cDNA expression bank of a patient and one healthy subject. The
differentiellen Clone werden mittels Fluoresenzmarkierung nachgewiesen und bioinformatorisch ausgewertet. Im Rahmen der Biomarkeridentifizierung werden verschiedene bioinformatische Analysen durchgeführt. Für jedes Serum werden mittels Microarray Reaktivitäten gegen ca. 2000 Differential clones are detected by fluorescence labeling and evaluated bioinformatorisch. In the context of biomarker identification various bioinformatic analyzes are carried out. For each serum, microarray reactivities against about 2000
unterschiedliche Antigene gemessen. Diese Daten werden für ein Ranking der gespotteten Antigene bzgl. ihrer measured different antigens. These data are used for a ranking of the spotted antigens regarding their
Differenzierungsfähigkeit zwischen gesunden und erkrankten Seren benutzt. Diese Auswertung wird mittels des nicht Differentiation ability between healthy and diseased sera used. This evaluation is by means of not
parametrischen Mann-Whitney Tests auf normalisierten parametric Mann-Whitney tests on normalized
Intensitätsdaten durchgeführt. Zur Normalisierung wird ein interner Standard benutzt, der auf jedem Chip mitgespottet wird. Da für jedes Antigen ein p-Wert berechnet wird, werden Methoden zur Korrektur des multiplen Testens eingesetzt. Als sehr konservativer Ansatz wird eine Bonferroni Korrektur durchgeführt und zusätzlich wird die weniger restriktive False Discovery Rate (FDR) nach Benjamini & Hochberg berechnet. Intensity data performed. For normalization, an internal standard is used, which is spotted on each chip. Since a p-value is calculated for each antigen, methods for correcting multiple testing are used. As a very conservative approach, a Bonferroni correction is performed and, in addition, the less restrictive False Discovery Rate (FDR) is calculated according to Benjamini & Hochberg.
Desweiteren werden die Daten zur Klassifikation der Seren benutzt. Hierbei kommen unterschiedliche multivariate Methoden zum Einsatz. Dies sind Methoden aus den statistischen Furthermore, the data are used to classify the sera. Here, different multivariate methods are used. These are methods from the statistical
Lernverfahren wie Support Vector Machines (SVM), Neuronale Netze oder Klassifikationsbäume, sowie eine Learning methods such as support vector machines (SVM), neural networks or classification trees, as well as a
Schwellenwertmethode, welche sowohl zur Klassifikation als auch zur visuellen Repräsentation der Daten geeignet ist.  Threshold method, which is suitable for both classification and visual representation of the data.
Zur Vermeidung von Overfitting wird eine lOfache Cross- Validierung der Daten durchgeführt. To avoid overfitting, a 10-fold cross-validation of the data is performed.
Tabelle A: (gi Accession Nummer mit Geltung vom 1.10.2010) Table A: (gi Accession number with validity from 1.10.2010)
SEQ la-716a Name SEQ la-716a name
gil66932947 alpha-2-macroglobulin precursor [Homo sapiens] gil66932947 alpha-2-macroglobulin precursor [Homo sapiens]
gil55743075 angio-associated, migratory cell protein [Homo sapiens] gil55743075 angio-associated, migratory cell protein [Homo sapiens]
gil45446740 ATP-binding cassette, sub-family A, member 2 isoform a [Homo sapiens] gil45446740 ATP-binding cassette, sub-family A, member 2 isoform a [Homo sapiens]
gil21536349 amiloride-sensitive cation Channel 2, neuronal isoform b [Homo sapiens] gil21536349 amiloride-sensitive cation Channel 2, neuronal isoform b [Homo sapiens]
gil4501867 aconitase 2 precursor [Homo sapiens] gil4501885 beta actin [Homo sapiens] gil4501867 aconitase 2 precursor [Homo sapiens] gil4501885 beta actin [Homo sapiens]
gil4501887 actin, gamma 1 propeptide [Homo sapiens] gil4501887 actin, gamma 1 propeptide [Homo sapiens]
gil29826323 adducin 1 (alpha) isoform c [Homo sapiens] gil29826323 adducin 1 (alpha) isoform c [Homo sapiens]
gill94353970 alpha-2A-adrenergic receptor [Homo sapiens] gill94353970 alpha-2A adrenergic receptor [Homo sapiens]
gill48539876 beta adrenergic receptor kinase 1 [Homo sapiens] gill48539876 beta adrenergic receptor kinase 1 [Homo sapiens]
gil4501989 alpha-fetoprotein precursor [Homo sapiens] gil4501989 alpha-fetoprotein precursor [Homo sapiens]
gill56523970 alpha-2-HS-glycoprotein [Homo sapiens] gill56523970 alpha-2-HS-glycoprotein [Homo sapiens]
gil4502027 albumin preproprotein [Homo sapiens] gil4502027 albumin preproprotein [Homo sapiens]
gil4557305 aldolase A [Homo sapiens] gil4557305 aldolase A [Homo sapiens]
gil32967601 ankyrin 3 isoform 1 [Homo sapiens] gil32967601 ankyrin 3 isoform 1 [Homo sapiens]
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 gil55749577  solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 gil55749577
[Homo sapiens]  [Homo sapiens]
gill56071459 solute carrier family 25, member 5 [Homo sapiens] gill56071459 solute carrier family 25, member 5 [Homo sapiens]
gill56071462 solute carrier family 25, member A6 [Homo sapiens] gill56071462 solute carrier family 25, member A6 [Homo sapiens]
gil4502131 amyloid beta A4 precursor protein-binding, family B, member 1 isoform E9 [Homo sapiens] gil4885065 amyloid precursor-like protein 1 isoform 2 precursor [Homo sapiens] gil4502131 amyloid beta A4 precursor protein-binding, family B, member 1 isoform E9 [Homo sapiens] gil4885065 amyloid precursor-like protein 1 isoform 2 precursor [Homo sapiens]
gil4502201 ADP-ribosylation factor 1 [Homo sapiens] gil4502201 ADP-ribosylation factor 1 [Homo sapiens]
gil4502209 ADP-ribosylation factor 5 [Homo sapiens] gil4502209 ADP-ribosylation factor 5 [Homo sapiens]
gil33469974 activating transcription factor 4 [Homo sapiens] gil33469974 activating transcription factor 4 [Homo sapiens]
gil49574491 Na+/K+ -ATPase beta 2 subunit [Homo sapiens] gil49574491 Na + / K + -ATPase beta 2 subunit [Homo sapiens]
ATP synthase, H+ transporting, mitochondrial Fl complex, alpha subunit precursor [Homo gil4757810  ATP synthase, H + transporting, mitochondrial Fl complex, alpha subunit precursor [Homo gil4757810
sapiens]  sapiens]
ATP synthase, H+ transporting, mitochondrial Fl complex, beta subunit precursor [Homo gil32189394  ATP synthase, H + transporting, mitochondrial Fl complex, beta subunit precursor [Homo gil32189394
sapiens]  sapiens]
ATP synthase, H+ transporting, mitochondrial FO complex, subunit C2 isoform a precursor gil50593533  ATP synthase, H + transporting, mitochondrial FO complex, subunit C2 isoform a precursor gil50593533
[Homo sapiens]  [Homo sapiens]
gil4502313 ATPase, H+ transporting, lysosomal, V0 subunit c [Homo sapiens] gil4502313 ATPase, H + transporting, lysosomal, V0 subunit c [Homo sapiens]
gil20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] gil20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
gil4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens] gil4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens]
gill 15387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens] gill 15387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
gill78557739 complement component 4B preproprotein [Homo sapiens] gill78557739 complement component 4B preproprotein [Homo sapiens]
gil8393009 chromosome 11 open reading frame2 [Homo sapiens] gil8393009 chromosome 11 open reading frame2 [Homo sapiens]
gil40804468 calcium Channel, voltage-dependent, beta 1 subunit isoform 1 [Homo sapiens] gil40804468 calcium channel, voltage-dependent, beta 1 subunit isoform 1 [Homo sapiens]
gil4502549 calmodulin 2 [Homo sapiens] gil4502549 calmodulin 2 [Homo sapiens]
gil4502565 calpain, small subunit 1 [Homo sapiens] gil4502565 calpain, small subunit 1 [Homo sapiens]
gil4502679 CD63 antigen isoform A [Homo sapiens] gil4502679 CD63 antigenic isoform A [Homo sapiens]
gill0835071 CD74 antigen isoform b [Homo sapiens] gill0835071 CD74 antigenic isoform b [Homo sapiens]
gill 19627240 cyclin-dependent kinase inhibitor 2C (pl8, inhibits CDK4), isoform CRA_b [Homo sapiens] gil56786147 cysteine dioxygenase, type I [Homo sapiens] gill 19627240 cyclin-dependent kinase inhibitor 2C (pI8, inhibits CDK4), isoform CRA_b [Homo sapiens] gil56786147 cysteine dioxygenase, type I [Homo sapiens]
gill69636439 cholesteryl ester transfer protein, plasma precursor [Homo sapiens] gill69636439 cholesteryl ester transfer protein, plasma precursor [Homo sapiens]
gil5031635 cofilin 1 (non-muscle) [Homo sapiens] gil5031635 cofilin 1 (non-muscle) [Homo sapiens]
gil4502805 chromogranin A precursor [Homo sapiens] gil4502805 chromogranin A precursor [Homo sapiens]
gil6978649 choline kinase beta isoform a [Homo sapiens] gil6978649 choline kinase beta isoform a [Homo sapiens]
gil21536286 brain creatine kinase [Homo sapiens] gil4502847 cold inducible RNA binding protein [Homo sapiens] gil21536286 brain creatine kinase [Homo sapiens] gil4502847 cold inducible RNA binding protein [Homo sapiens]
gill4917109 adaptor-related protein complex 2, mu 1 subunit isoform a [Homo sapiens] gil4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo sapiens] gill4917109 adaptor-related protein complex 2, mu 1 subunit isoform a [Homo sapiens] gil4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo sapiens]
gil41872374 polo-like kinase 3 [Homo sapiens] gil41872374 polo-like kinase 3 [Homo sapiens]
gil4502981 cytochrome c oxidase subunit IV isoform 1 precursor [Homo sapiens] gil4503049 cysteine-rich protein 2 [Homo sapiens] gil4502981 cytochrome c oxidase subunit IV isoform 1 precursor [Homo sapiens] gil4503049 cysteine-rich protein 2 [Homo sapiens]
gil4503051 collapsin response mediator protein 1 isoform 2 [Homo sapiens] gil4503051 collapsin response mediator protein 1 isoform 2 [Homo sapiens]
gil4503065 crystallin, mu isoform 1 [Homo sapiens] gil4503065 crystallin, mu isoform 1 [Homo sapiens]
gil4503101 cysteine and glycine-rich protein 2 [Homo sapiens] gil4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
gil4503107 cystatin C precursor [Homo sapiens] gil4503107 cystatin C precursor [Homo sapiens]
gil4503139 cathepsin B preproprotein [Homo sapiens] gil4503139 cathepsin B preproprotein [Homo sapiens]
gil4503211 cytochrome P450, family 27, subfamily A, Polypeptide 1 precursor [Homo sapiens] gill8426915 drebrin 1 isoform a [Homo sapiens] gil4503211 cytochrome P450, family 27, subfamily A, polypeptides 1 precursor [Homo sapiens] gill8426915 drebrin 1 isoform a [Homo sapiens]
gil62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo sapiens] gil62530384 dodecenoyl coenzyme A delta isomerase precursor [Homo sapiens]
gill3259510 dynactin 1 isoform 1 [Homo sapiens] gill3259510 dynactin 1 isoform 1 [Homo sapiens]
gil4758138 DEAD (Asp-Glu-Ala-Asp) box Polypeptide 5 [Homo sapiens] gil4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
gill93783649 unnamed protein product [Homo sapiens] gill93783649 unnamed protein product [Homo sapiens]
gi|42544174 deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] gi | 42544174 deoxythymidylate kinase (thymidylate kinase) [Homo sapiens]
gil4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo sapiens] gil4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo sapiens]
gil4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens] gil4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo sapiens]
gil4503477 eukaryotic translation elongation factor 1 beta 2 [Homo sapiens] gil4503477 eukaryotic translation elongation factor 1 beta 2 [Homo sapiens]
gil4503481 eukaryotic translation elongation factor 1 gamma [Homo sapiens] gil4503481 eukaryotic translation elongation factor 1 gamma [Homo sapiens]
gil4503483 eukaryotic translation elongation factor 2 [Homo sapiens] gil4503483 eukaryotic translation elongation factor 2 [Homo sapiens]
gil4826708 ephrin A3 [Homo sapiens] gil4826708 ephrin A3 [Homo sapiens]
gill 10347457 EGF-like-domain, multiple 3 [Homo sapiens] gill 10347457 EGF-like-domain, multiple 3 [Homo sapiens]
gil4503529 eukaryotic translation Initiation factor 4A isoform 1 [Homo sapiens] gil4503529 eukaryotic translation Initiation factor 4A isoform 1 [Homo sapiens]
gil49355765 ELAV-like protein 3 isoform 2 [Homo sapiens] gil49355765 ELAV-like protein 3 isoform 2 [Homo sapiens]
gil4503571 enolase 1 [Homo sapiens] gil4503571 enolase 1 [Homo sapiens]
gil4758272 endosulfine alpha isoform 3 [Homo sapiens] gil4758272 endosulfine alpha isoform 3 [Homo sapiens]
gill66362737 erythrocyte membrane protein band 4.2 isoform 2 [Homo sapiens] gill66362737 erythrocyte membrane protein band 4.2 isoform 2 [Homo sapiens]
gill94097332 ephrin receptor EphB6 precursor [Homo sapiens] gill94097332 ephrin receptor EphB6 precursor [Homo sapiens]
gil4503599 excision repair cross-complementing 1 isofrom 2 [Homo sapiens] gil4503599 excision repair cross-complementing 1 isofrom 2 [Homo sapiens]
gil46370066 exostosin 1 [Homo sapiens] gil46370066 exostosin 1 [Homo sapiens]
gil27886588 PTK2B protein tyrosine kinase 2 beta isoform b [Homo sapiens] gil27886588 PTK2B protein tyrosine kinase 2 beta isoform b [Homo sapiens]
gil41872631 fatty acid synthase [Homo sapiens] gil41872631 fatty acid synthase [Homo sapiens]
gil4503659 ubiquitin-like protein fubi and ribosomal protein S30 precursor [Homo sapiens] gil67089147 farnesyl-diphosphate farnesyltransferase 1 [Homo sapiens] gil4503659 ubiquitin-like protein fubi and ribosomal protein S30 precursor [Homo sapiens] gil67089147 farnesyl diphosphate farnesyltransferase 1 [Homo sapiens]
gil209571584 farnesyl diphosphate synthase isoform b [Homo sapiens] gil209571584 farnesyl diphosphate synthase isoform b [Homo sapiens]
gil4758356 flap structure-specific endonuclease 1 [Homo sapiens] gil4758356 Flap structure-specific endonuclease 1 [Homo sapiens]
gil213417614 fibroblast growth factor 13 isoform 3 [Homo sapiens] gil213417614 fibroblast growth factor 13 isoform 3 [Homo sapiens]
gil4503711 fibroblast growth factor receptor 3 isoform 1 precursor [Homo sapiens] gil4503727 FK506 binding protein 3, 25kDa [Homo sapiens] gil56682959 ferritin, heavy Polypeptide 1 [Homo sapiens] gil4503711 fibroblast growth factor receptor 3 isoform 1 precursor [Homo sapiens] gil4503727 FK506 binding protein 3, 25kDa [Homo sapiens] gil56682959 ferritin, heavy polypeptide 1 [Homo sapiens]
gil4503817 3-ketodihydrosphingosine reductase precursor [Homo sapiens] gil4503817 3-ketodihydrosphingosine reductase precursor [Homo sapiens]
gill08773793 glucose-6-phosphate dehydrogenase isoform b [Homo sapiens] gill08773793 glucose-6-phosphate dehydrogenase isoform b [Homo sapiens]
gill 1497612 gamma-aminobutyric acid (GABA) B receptor 1 isoform b precursor [Homo sapiens] gil66346737 glucosidase, alpha; neutral C [Homo sapiens] gill 1497612 gamma-aminobutyric acid (GABA) B receptor 1 isoform b precursor [Homo sapiens] gil66346737 glucosidase, alpha; neutral C [Homo sapiens]
gil4503911 growth associated protein 43 isoform 2 [Homo sapiens] gil4503911 growth associated protein 43 isoform 2 [Homo sapiens]
gil7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens] gil7669492 glyceraldehyde-3-phosphate dehydrogenase [Homo sapiens]
gil4503971 GDP dissociation inhibitor 1 [Homo sapiens] gil4503971 GDP dissociation inhibitor 1 [Homo sapiens]
gill 17938765 GNAS complex locus isoform g [Homo sapiens] gill 17938765 GNAS complex locus isoform g [Homo sapiens]
gil33695088 glycerol-3-phosphate dehydrogenase 1 (soluble) [Homo sapiens] gil33695088 glycerol-3-phosphate dehydrogenase 1 (soluble) [Homo sapiens]
gil47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens] gil47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]
gil41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens] gil41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens]
gil75709200 glutathione peroxidase 4 isoform A precursor [Homo sapiens] gil75709200 glutathione peroxidase 4 isoform A precursor [Homo sapiens]
gil4504111 growth factor receptor-bound protein 2 isoform 1 [Homo sapiens] gil4504111 growth factor receptor-bound protein 2 isoform 1 [Homo sapiens]
gil29029597 glutamate receptor KA2 precursor [Homo sapiens] gil29029597 glutamate receptor KA2 precursor [Homo sapiens]
gil57165373 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 [Homo sapiens] gil4504183 glutathione transferase [Homo sapiens] gil57165373 glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 [Homo sapiens] gil4504183 glutathione transferase [Homo sapiens]
gil4885375 histone Cluster 1, Hlc [Homo sapiens] gil4885375 histone cluster 1, Hlc [Homo sapiens]
gil4504279 H3 histone, family 3A [Homo sapiens] gil4504279 H3 histone, family 3A [Homo sapiens]
gil4504345 alpha 2 globin [Homo sapiens] gil4504345 alpha 2 globin [Homo sapiens]
gil4885419 zinc finger and BTB domain containing 48 [Homo sapiens] gil4885419 zinc finger and BTB domain containing 48 [Homo sapiens]
gill 19630055 high-mobility group nucleosome binding domain 1, isoform CRA_a [Homo sapiens] gil 14043070 heterogeneous nuclear ribonucleoprotein AI isoform b [Homo sapiens] gill 19630055 high-mobility group nucleosome binding domain 1, isoform CRA_a [Homo sapiens] gil 14043070 heterogeneous nuclear ribonucleoprotein AI isoform b [Homo sapiens]
gil51477708 heterogeneous nuclear ribonucleoprotein D isoform d [Homo sapiens] gil51477708 heterogeneous nuclear ribonucleoprotein D isoform d [Homo sapiens]
gil4826760 heterogeneous nuclear ribonucleoprotein F [Homo sapiens] gil4826760 heterogeneous nuclear ribonucleoprotein F [Homo sapiens]
gill54759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo sapiens] gill54759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo sapiens]
gil4504511 DnaJ (Hsp40) homolog, subfamily A, member 1 [Homo sapiens] gil4504511 DnaJ (Hsp40) homologue, subfamily A, member 1 [Homo sapiens]
gil5729877 heat shock 70kDa protein 8 isoform 1 [Homo sapiens] gil5729877 heat shock 70kDa protein 8 isoform 1 [Homo sapiens]
gill54146191 heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 2 [Homo sapiens] gil31542947 chaperonin [Homo sapiens] gill54146191 heat shock protein 90kDa alpha (cytosolic), class A member 1 isoform 2 [Homo sapiens] gil31542947 chaperonin [Homo sapiens]
gill2545395 islet cell autoantigen 1 [Homo sapiens] gill2545395 islet cell autoantigen 1 [Homo sapiens]
gil28178832 isocitrate dehydrogenase 2 (NADP+), mitochondrial precursor [Homo sapiens] gil28178821 isocitrate dehydrogenase 3, beta subunit isoform a precursor [Homo sapiens] gil4504619 insulin-like growth factor binding protein 7 [Homo sapiens] gil28178832 isocitrate dehydrogenase 2 (NADP +), mitochondrial precursor [Homo sapiens] gil28178821 isocitrate dehydrogenase 3, beta subunit isoform a precursor [Homo sapiens] gil4504619 insulin-like growth factor binding protein 7 [Homo sapiens]
gill25988409 RED protein [Homo sapiens] gill25988409 RED protein [Homo sapiens]
gil66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens] gil66933016 inosine monophosphate dehydrogenase 2 [Homo sapiens]
gil68800350 interleukin-1 receptor-associated kinase 1 isoform 3 [Homo sapiens] gil68800350 interleukin-1 receptor-associated kinase 1 isoform 3 [Homo sapiens]
gill93785653 unnamed protein product [Homo sapiens] gill93785653 unnamed protein product [Homo sapiens]
gill5626999 inosine triphosphatase isoform a [Homo sapiens] gill5626999 inosine triphosphatase isoform a [Homo sapiens]
gil4504811 junction plakoglobin [Homo sapiens] gil4504811 junction plakoglobin [Homo sapiens]
gil20070166 potassium voltage-gated Channel, subfamily F, member 1 [Homo sapiens] gil20070166 potassium voltage-gated channel, subfamily F, member 1 [Homo sapiens]
gil4758648 kinesin family member 5B [Homo sapiens] gill 16829964 KiSS-1 metastasis-suppressor [Homo sapiens] gil4758648 kinesin family member 5B [Homo sapiens] gill 16829964 KiSS-1 metastasis-suppressor [Homo sapiens]
gill94306559 kinesin light chain 1 isoform 3 [Homo sapiens] gill94306559 kinesin light chain 1 isoform 3 [Homo sapiens]
gil9845502 ribosomal protein SA [Homo sapiens] gil9845502 ribosomal protein SA [Homo sapiens]
gil5031851 stathmin 1 [Homo sapiens] gil5031851 stathmin 1 [Homo sapiens]
gil4557032 L-lactate dehydrogenase B [Homo sapiens] gil4557032 L-lactate dehydrogenase B [Homo sapiens]
gil5031877 lamin B 1 [Homo sapiens] gil5031877 lamin B 1 [Homo sapiens]
gill67555125 low density lipoprotein receptor-related protein 3 [Homo sapiens] gill67555125 low density lipoprotein receptor-related protein 3 [Homo sapiens]
gill53945728 microtubule-associated protein 1B [Homo sapiens] gill53945728 microtubule-associated protein 1B [Homo sapiens]
gil8400715 microtubule-associated protein tau isoform 4 [Homo sapiens] gil8400715 microtubule-associated protein tau isoform 4 [Homo sapiens]
gil 14043022 methionyl-tRNA synthetase [Homo sapiens] gil 14043022 methionyl-tRNA synthetase [Homo sapiens]
gill 10347461 MYC-associated zinc finger protein isoform 1 [Homo sapiens] gill 10347461 MYC-associated zinc finger protein isoform 1 [Homo sapiens]
gil6631095 minichromosome maintenance complex component 3 [Homo sapiens] gil6631095 minichromosome maintenance complex component 3 [Homo sapiens]
gil23510448 minichromosome maintenance complex component 5 [Homo sapiens] gil23510448 minichromosome maintenance complex component 5 [Homo sapiens]
gil5031905 MyoD family inhibitor [Homo sapiens] gil5031905 MyoD family inhibitor [Homo sapiens]
gil84311247 mutant truncated midkine B [Homo sapiens] gil84311247 mutant truncated midkine B [Homo sapiens]
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, gil57222568  myeloid / lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, gil57222568
6 [Homo sapiens]  6 [Homo sapiens]
gil61835204 mercaptopyruvate sulfurtransferase isoform 2 [Homo sapiens] gil61835204 mercaptopyruvate sulfur transferase isoform 2 [Homo sapiens]
gil4505289 diphosphomevalonate decarboxylase [Homo sapiens] gil4505289 diphosphomevalonate decarboxylase [Homo sapiens]
gill7986258 myosin, light chain 6, alkali, smooth muscle and non-muscle isoform 1 [Homo sapiens] gill54354979 myosin X [Homo sapiens] gill7986258 myosin, light chain 6, alkaline, smooth muscle and non-muscle isoform 1 [Homo sapiens] gill54354979 myosin X [Homo sapiens]
gil5174607 NGFI-A binding protein 2 [Homo sapiens] gil5174607 NGFI-A binding protein 2 [Homo sapiens]
gil5031931 nascent polypeptide-associated complex alpha subunit isoform b [Homo sapiens] gil5031931 nascent polypeptide-associated complex alpha subunit isoform b [Homo sapiens]
gill57412270 heterogeneous nuclear ribonucleoprotein M isoform b [Homo sapiens] gill57412270 heterogeneous nuclear ribonucleoprotein M isoform b [Homo sapiens]
gil4557789 norrin [Homo sapiens] gil4557789 norrin [Homo sapiens]
gil4758768 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor [Homo sapiens] gil4758774 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa [Homo sapiens] gil20149568 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa precursor [Homo sapiens] gil98986461 neurogenic differentiation 2 [Homo sapiens] gil4758768 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor [Homo sapiens] gil4758774 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa [Homo sapiens] gil20149568 NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa precursor [Homo sapiens] gil98986461 neurogenic differentiation 2 [Homo sapiens]
gil 187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] gil 187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
gill 19596463 neuronatin, isoform CRA_a [Homo sapiens] gill 19596463 neuronatin, isoform CRA_a [Homo sapiens]
gil4505409 non-metastatic cells 2, protein (NM23B) expressed in [Homo sapiens] gil4505409 non-metastatic cells 2, protein (NM23B) expressed in [Homo sapiens]
gill0835063 nucleophosmin 1 isoform 1 [Homo sapiens] gill0835063 nucleophosmin 1 isoform 1 [Homo sapiens]
gil34098946 nuclease sensitive element binding protein 1 [Homo sapiens] gil34098946 nuclease sensitive element binding protein 1 [Homo sapiens]
gil71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] gil71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
gil9845505 Ornithine decarboxylase antizyme 1 [Homo sapiens] gil9845505 Ornithine decarboxylase antizyme 1 [Homo sapiens]
RecName: Full=Mitochondrial inner membrane protein OXAIL; AltName: Full=Oxidase gil38372882 assembly 1-like protein; Short=OXA 1-like protein; AltName: Full=OXAlHs; AltName:  RecName: Full = mitochondrial inner membrane protein OXAIL; AltName: Full = oxidase gil38372882 assembly 1-like protein; Short = OXA 1-like protein; AltName: Full = OXAlHs; altname:
Full=Hsa; Flags: Precursor  Full = Hsa; Flags: precursor
gil20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo sapiens] gil20070125 prolyl 4-hydroxylase, beta subunit precursor [Homo sapiens]
gi|124494254 ErbB3-binding protein 1 [Homo sapiens] gi | 124494254 ErbB3-binding protein 1 [Homo sapiens]
gil4505621 prostatic binding protein [Homo sapiens] gil4505621 prostatic binding protein [Homo sapiens]
gil4505591 peroxiredoxin 1 [Homo sapiens] gil93141029 paralemmin isoform 2 [Homo sapiens] gil4505591 peroxiredoxin 1 [Homo sapiens] gil93141029 paralemmin isoform 2 [Homo sapiens]
gill06049292 pyruvate carboxylase precursor [Homo sapiens] gill06049292 pyruvate carboxylase precursor [Homo sapiens]
gill34019487 chromatin modifying protein 1A isoform 1 [Homo sapiens] gill34019487 chromatin modifying protein 1A isoform 1 [Homo sapiens]
gil4505685 pyruvate dehydrogenase (lipoamide) alpha 1 precursor [Homo sapiens] gil4505685 pyruvate dehydrogenase (lipoamide) alpha 1 precursor [Homo sapiens]
gil22202633 prefoldin subunit 5 isoform alpha [Homo sapiens] gil22202633 prefoldin subunit 5 isoform alpha [Homo sapiens]
gill 1321601 phosphofructokinase, platelet [Homo sapiens] gill 1321601 phosphofructokinase, platelet [Homo sapiens]
gill6753215 profilin 2 isoform a [Homo sapiens] gill6753215 profilin 2 isoform a [Homo sapiens]
gil4505753 phosphoglycerate mutase 1 (brain) [Homo sapiens] gil4505753 phosphoglycerate mutase 1 (brain) [Homo sapiens]
gil20149543 placental growth factor, vascular endothelial growth factor-related protein [Homo sapiens] gil5453898 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 [Homo sapiens] gil205360954 polycystin 1 isoform 1 precursor [Homo sapiens] gil20149543 placental growth factor, vascular endothelial growth factor-related protein [Homo sapiens] gil5453898 protein (peptidyl prolyl cis / trans isomerase) NIMA interacting 1 [Homo sapiens] gil205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
gil33286420 pyruvate kinase, muscle isoform Ml [Homo sapiens] gil33286420 pyruvate kinase, muscle isoform Ml [Homo sapiens]
gil33598948 phospholipase C gamma 1 isoform a [Homo sapiens] gil33598948 phospholipase C gamma 1 isoform a [Homo sapiens]
gil9945439 septin 5 [Homo sapiens] gil9945439 septin 5 [Homo sapiens]
gill56616275 Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo sapiens] gill 10618253 mitochondrial DNA-directed RNA Polymerase precursor [Homo sapiens] gill56616275 Polymerase (DNA directed), delta 1, catalytic subunit 125kDa [Homo sapiens] gill 10618253 mitochondrial DNA-directed RNA polymerase precursor [Homo sapiens]
gill27139033 cytochrome P450 reductase [Homo sapiens] gill27139033 cytochrome P450 reductase [Homo sapiens]
gill0863927 peptidylprolyl isomerase A [Homo sapiens] gill0863927 peptidylprolyl isomerase A [Homo sapiens]
gil4758950 peptidylprolyl isomerase B precursor [Homo sapiens] gil4758950 peptidylprolyl isomerase B precursor [Homo sapiens]
gil4826932 peptidylprolyl isomerase D [Homo sapiens] gil4826932 peptidylprolyl isomerase D [Homo sapiens]
gil4506003 protein Phosphatase 1, catalytic subunit, alpha isoform 1 [Homo sapiens] gil4506003 protein Phosphatase 1, catalytic subunit, alpha isoform 1 [Homo sapiens]
gil21361399 alpha isoform of regulatory subunit A, protein Phosphatase 2 [Homo sapiens] gil5453958 protein Phosphatase 5, catalytic subunit [Homo sapiens] gil21361399 alpha isoform of regulatory subunit A, protein phosphatase 2 [Homo sapiens] gil5453958 protein Phosphatase 5, catalytic subunit [Homo sapiens]
gil38257139 protein kinase, cAMP-dependent, regulatory, type I, beta [Homo sapiens] gil38257139 protein kinase, cAMP-dependent, regulatory, type I, beta [Homo sapiens]
gil20128774 mitogen-activated protein kinase 11 [Homo sapiens] gil20128774 mitogen-activated protein kinase 11 [Homo sapiens]
gill 1386147 prosaposin isoform a preproprotein [Homo sapiens] gill 1386147 prosaposin isoform a preproprotein [Homo sapiens]
gil4506193 proteasome beta 1 subunit [Homo sapiens] gil4506193 proteasome beta 1 subunit [Homo sapiens]
gil25777602 proteasome 26S non- ATPase subunit 2 [Homo sapiens] gil25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens]
gill 8543329 proteasome 26S non- ATPase subunit 9 [Homo sapiens] gill 8543329 proteasome 26S non-ATPase subunit 9 [Homo sapiens]
gil4506217 proteasome 26S non-ATPase subunit 10 isoform 1 [Homo sapiens] gil4506217 proteasome 26S non-ATPase subunit 10 isoform 1 [Homo sapiens]
gil46249388 phosphoserine Phosphatase [Homo sapiens] gil46249388 phosphoserine phosphatase [Homo sapiens]
gil28558998 polypyrimidine tract-binding protein 1 isoform d [Homo sapiens] gil28558998 polypyrimidine tract-binding protein 1 isoform d [Homo sapiens]
gil4506281 pleiotrophin [Homo sapiens] gil4506281 pleiotrophin [Homo sapiens]
gil4506367 RAB3A, member RAS oncogene family [Homo sapiens] gil4506367 RAB3A, member RAS oncogene family [Homo sapiens]
gil9845511 ras-related C3 botulinum toxin Substrate 1 isoform Racl [Homo sapiens] gil9845511 ras-related C3 botulinum toxin substrates 1 isoform racl [Homo sapiens]
gil4506401 v-raf-1 murine leukemia viral oncogene homolog 1 [Homo sapiens] gil4506401 v-raf-1 murine leukemia viral oncogene homolog 1 [Homo sapiens]
gil5453555 ras-related nuclear protein [Homo sapiens] gil5453555 ras-related nuclear protein [Homo sapiens]
gil93277122 RNA binding motif protein 4 [Homo sapiens] gil93277122 RNA binding motif protein 4 [Homo sapiens]
gil4506457 reticulocalbin 2, EF-hand calcium binding domain [Homo sapiens] gil4506457 reticulocalbin 2, EF-hand calcium binding domain [Homo sapiens]
gil5454004 D4, zinc and double PHD fingers family 2 [Homo sapiens] gil5454004 D4, zinc and double PHD finger family 2 [Homo sapiens]
gill68983744 tripartite motif-containing 27 [Homo sapiens] gill68983744 tripartite motif-containing 27 [Homo sapiens]
gill56416009 regulator of G-protein signalling 16 [Homo sapiens] gil4506649 ribosomal protein L3 isoform a [Homo sapiens] gill6579885 ribosomal protein L4 [Homo sapiens] gill56416009 regulator of G-protein signaling 16 [Homo sapiens] gil4506649 ribosomal protein L3 isoform a [Homo sapiens] gill6579885 ribosomal protein L4 [Homo sapiens]
gill4591909 ribosomal protein L5 [Homo sapiens] gill4591909 ribosomal protein L5 [Homo sapiens]
gill6753227 ribosomal protein L6 [Homo sapiens] gill6753227 ribosomal protein L6 [Homo sapiens]
gill5431301 ribosomal protein L7 [Homo sapiens] gill5431301 ribosomal protein L7 [Homo sapiens]
gil4506661 ribosomal protein L7a [Homo sapiens] gil4506661 ribosomal protein L7a [Homo sapiens]
gil4506663 ribosomal protein L8 [Homo sapiens] gil4506663 ribosomal protein L8 [Homo sapiens]
gill5431303 ribosomal protein L9 [Homo sapiens] gill5431303 ribosomal protein L9 [Homo sapiens]
gil249371 laminin receptor homolog [Homo sapiens] gil249371 laminin receptor homolog [Homo sapiens]
gill5431290 ribosomal protein LI 1 [Homo sapiens] gill5431290 ribosomal protein LI 1 [Homo sapiens]
gil4506597 ribosomal protein L12 [Homo sapiens] gil4506597 ribosomal protein L12 [Homo sapiens]
gill5431295 ribosomal protein LI 3 [Homo sapiens] gill5431295 ribosomal protein LI 3 [Homo sapiens]
gill5431293 ribosomal protein L15 [Homo sapiens] gill5431293 ribosomal protein L15 [Homo sapiens]
gil4506617 ribosomal protein L17 [Homo sapiens] gil4506617 ribosomal protein L17 [Homo sapiens]
gil4506607 ribosomal protein LI 8 [Homo sapiens] gil4506607 ribosomal protein LI 8 [Homo sapiens]
gill 1415026 ribosomal protein LI 8a [Homo sapiens] gill 1415026 ribosomal protein LI 8a [Homo sapiens]
gill8104948 ribosomal protein L21 [Homo sapiens] gill8104948 ribosomal protein L21 [Homo sapiens]
gil4506613 ribosomal protein L22 proprotein [Homo sapiens] gil4506621 ribosomal protein L26 [Homo sapiens] gil4506613 ribosomal protein L22 proprotein [Homo sapiens] gil4506621 ribosomal protein L26 [Homo sapiens]
gil4506629 ribosomal protein L29 [Homo sapiens] gil4506629 ribosomal protein L29 [Homo sapiens]
gil4506633 ribosomal protein L31 isoform 1 [Homo sapiens] gill6117791 ribosomal protein L35a [Homo sapiens] gil4506633 ribosomal protein L31 isoform 1 [Homo sapiens] gill6117791 ribosomal protein L35a [Homo sapiens]
gil4506641 ribosomal protein L37 [Homo sapiens] gil4506641 ribosomal protein L37 [Homo sapiens]
gil4506643 ribosomal protein L37a [Homo sapiens] gil4506643 ribosomal protein L37a [Homo sapiens]
gil4506667 ribosomal protein PO [Homo sapiens] gil4506667 ribosomal protein PO [Homo sapiens]
gil4506671 ribosomal protein P2 [Homo sapiens] gil4506671 ribosomal protein P2 [Homo sapiens]
gill5055539 ribosomal protein S2 [Homo sapiens] gill5055539 ribosomal protein S2 [Homo sapiens]
gill5718687 ribosomal protein S3 [Homo sapiens] gill5718687 ribosomal protein S3 [Homo sapiens]
gil4506723 ribosomal protein S3a [Homo sapiens] gil4506723 ribosomal protein S3a [Homo sapiens]
gil4506725 ribosomal protein S4, X-linked X isoform [Homo sapiens] gil4506727 ribosomal protein S4, Y-linked 1 Y isoform [Homo sapiens] gill 3904870 ribosomal protein S5 [Homo sapiens] gil4506725 ribosomal protein S4, X-linked X isoform [Homo sapiens] gil4506727 ribosomal protein S4, Y-linked 1 Y isoform [Homo sapiens] gill 3904870 ribosomal protein S5 [Homo sapiens]
gill7158044 ribosomal protein S6 [Homo sapiens] gill7158044 ribosomal protein S6 [Homo sapiens]
gil4506743 ribosomal protein S8 [Homo sapiens] gil4506743 ribosomal protein S8 [Homo sapiens]
gill4141193 ribosomal protein S9 [Homo sapiens] gill4141193 ribosomal protein S9 [Homo sapiens]
gil4506679 ribosomal protein S 10 [Homo sapiens] gil4506679 ribosomal protein S 10 [Homo sapiens]
gil 14277700 ribosomal protein S 12 [Homo sapiens] gil 14277700 ribosomal protein S 12 [Homo sapiens]
gil4506685 ribosomal protein S 13 [Homo sapiens] gil4506685 ribosomal protein S 13 [Homo sapiens]
gil5032051 ribosomal protein S 14 [Homo sapiens] gil5032051 ribosomal protein S 14 [Homo sapiens]
gil4506687 ribosomal protein S 15 [Homo sapiens] gil4506687 ribosomal protein S 15 [Homo sapiens]
gill4165469 ribosomal protein S 15a [Homo sapiens] gill4165469 ribosomal protein S 15a [Homo sapiens]
gil4506691 ribosomal protein S 16 [Homo sapiens] gill l968182 ribosomal protein S 18 [Homo sapiens] gil4506691 ribosomal protein S 16 [Homo sapiens] gill l968182 ribosomal protein S 18 [Homo sapiens]
gil4506701 ribosomal protein S23 [Homo sapiens] gil4506701 ribosomal protein S23 [Homo sapiens]
gil214010224 ribosomal protein S24 isoform f [Homo sapiens] gil214010224 ribosomal protein S24 isoform f [Homo sapiens]
gil4506707 ribosomal protein S25 [Homo sapiens] gil4506707 ribosomal protein S25 [Homo sapiens]
gil4506711 ribosomal protein S27 [Homo sapiens] gil4506711 ribosomal protein S27 [Homo sapiens]
gil4506713 ubiquitin and ribosomal protein S27a precursor [Homo sapiens] gil4506713 ubiquitin and ribosomal protein S27a precursor [Homo sapiens]
gil71772583 ribosomal protein S29 isoform 2 [Homo sapiens] gil71772583 ribosomal protein S29 isoform 2 [Homo sapiens]
gil45827776 reticulon 1 isoform C [Homo sapiens] gil45827776 reticulon 1 isoform C [Homo sapiens]
gill6306548 seryl-tRNA synthetase [Homo sapiens] gill6306548 seryl-tRNA synthetase [Homo sapiens]
gil666052 syndecan-1 [Homo sapiens] gil666052 syndecan-1 [Homo sapiens]
gill 19577915 selenoprotein W, 1 [Homo sapiens] gill 19577915 selenoprotein W, 1 [Homo sapiens]
gil5902076 splicing factor, arginine/serine-rich 1 isoform 1 [Homo sapiens] gil5902076 splicing factor, arginine / serine-rich 1 isoform 1 [Homo sapiens]
gil72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] gil72534660 splicing factor, arginine / serine-rich 7 [Homo sapiens]
gil4506913 sarcoglycan, beta [Homo sapiens] gil4506913 sarcoglycan, beta [Homo sapiens]
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 precursor [Homo gil21389315  solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 precursor [Homo gil21389315
sapiens]  sapiens]
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B gil21071056  SWI / SNF-related matrix-associated actin-dependent regulator of chromatin a4 isoform B gil21071056
[Homo sapiens]  [Homo sapiens]
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, gil55956801  SWI / SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, gil55956801
member 1 isoform b [Homo sapiens]  member 1 isoform b [Homo sapiens]
gil4507115 fascin 1 [Homo sapiens] gil4507115 fascin 1 [Homo sapiens]
gil29568103 Ul small nuclear ribonucleoprotein 70 kDa [Homo sapiens] gil29568103 Ul small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gil4507125 small nuclear ribonucleoprotein Polypeptide B/B' isoform B [Homo sapiens] gil4507125 small nuclear ribonucleoprotein polypeptides B / B 'isoform B [Homo sapiens]
gil4507127 small nuclear ribonucleoprotein Polypeptide C [Homo sapiens] gil4507127 small nuclear ribonucleoprotein polypeptides C [Homo sapiens]
gil4507171 secreted protein, acidic, cysteine-rich [Homo sapiens] gil4507171 secreted protein, acidic, cysteine-rich [Homo sapiens]
gil5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] gil5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
gil38679884 sorcin isoform b [Homo sapiens] gil38679884 sorcinol isoform b [Homo sapiens]
gil63253298 spermidine synthase [Homo sapiens] gil63253298 spermidine synthase [Homo sapiens]
gil 149999611 signal recognition particle 14kDa (homologous Alu RNA binding protein) [Homo sapiens] gill5208660 tripartite motif protein 21 [Homo sapiens] gil 149999611 signal recognition particle 14kDa (homologous Alu RNA binding protein) [Homo sapiens] gill5208660 tripartite motif protein 21 [Homo sapiens]
gill08796056 TROVE domain family, member 2 isoform 1 [Homo sapiens] gill08796056 TROVE domain family, member 2 isoform 1 [Homo sapiens]
gil4507239 signal sequence receptor, beta precursor [Homo sapiens] gil4507239 signal sequence receptor, beta precursor [Homo sapiens]
gil94400932 syntaxin 5 [Homo sapiens] gil94400932 syntaxin 5 [Homo sapiens]
gil29540543 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 isoform b [Homo sapiens] gil92859638 synaptotagmin V [Homo sapiens] gil29540543 sulfotransferase family, cytosolic, 1A, phenolic-preferring, member 1 isoform b [homo sapiens] gil92859638 synaptotagmin V [homo sapiens]
gil4507373 beta-tubulin cofactor C [Homo sapiens] gil4507373 beta-tubulin cofactor C [Homo sapiens]
gil41350333 beta-tubulin cofactor D [Homo sapiens] gil41350333 beta-tubulin cofactor D [Homo sapiens]
gil4507385 transcription elongation factor A protein 2 isoform a [Homo sapiens] gil4507385 transcription elongation factor A protein 2 isoform a [Homo sapiens]
gil57863259 T-complex protein 1 isoform b [Homo sapiens] gil57863259 T-complex protein 1 isoform b [Homo sapiens]
gil32189392 peroxiredoxin 2 isoform a [Homo sapiens] gil32189392 peroxiredoxin 2 isoform a [Homo sapiens]
gil4507521 transketolase isoform 1 [Homo sapiens] gil4507521 transketolase isoform 1 [Homo sapiens]
gil21265104 tetraspanin 7 [Homo sapiens] gil21265104 tetraspanin 7 [Homo sapiens]
gil4507645 triosephosphate isomerase 1 [Homo sapiens] gil4507677 heat shock protein 90kDa beta, member 1 [Homo sapiens] gil4507645 triosephosphate isomerase 1 [Homo sapiens] gil4507677 heat shock protein 90kDa beta, member 1 [Homo sapiens]
gil58761484 chaperonin containing TCP1, subunit 3 isoform c [Homo sapiens] gil58761484 chaperonin containing TCP1, subunit 3 isoform c [Homo sapiens]
gil91208423 thyroid receptor-interacting protein 6 [Homo sapiens] gil91208423 thyroid receptor-interacting protein 6 [Homo sapiens]
gill 16256350 tuberous sclerosis 2 isoform 4 [Homo sapiens] gill 16256350 tuberous sclerosis 2 isoform 4 [Homo sapiens]
gil49640009 tetratricopeptide repeat domain 3 [Homo sapiens] gil49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
gil4507729 tubulin, beta 2 [Homo sapiens] gil4507729 tubulin, beta 2 [Homo sapiens]
gil5803207 U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens] gil5803207 U2 small nuclear RNA auxillary factor 1 isoform a [Homo sapiens]
gil67191208 ubiquitin C [Homo sapiens] gil67191208 ubiquitin C [Homo sapiens]
gil21361091 ubiquitin carboxyl-terminal esterase LI [Homo sapiens] gil21361091 ubiquitin carboxyl-terminal esterase LI [Homo sapiens]
gil46593007 ubiquinol-cytochrome c reductase core protein I [Homo sapiens] gil46593007 ubiquinol cytochrome c reductase core protein I [Homo sapiens]
gil46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens] gil46877105 upstream stimulatory factor 2 isoform 2 [Homo sapiens]
gil4507877 vinculin isoform VCL [Homo sapiens] gil4507877 vinculin isoform VCL [Homo sapiens]
gil6005942 valosin-containing protein [Homo sapiens] gil6005942 valosin-containing protein [Homo sapiens]
gil4507879 voltage-dependent anion Channel 1 [Homo sapiens] gil4507879 voltage-dependent anion channel 1 [Homo sapiens]
gil62414289 vimentin [Homo sapiens] gil62414289 vimentin [Homo sapiens]
gil88853069 vitronectin precursor [Homo sapiens] gil88853069 vitronectin precursor [Homo sapiens]
gill90684675 X-ray repair cross complementing protein 1 [Homo sapiens] gill90684675 X-ray repair cross complementing protein 1 [Homo sapiens]
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta Polypeptide gil4507949  tyrosine 3-monooxygenase / tryptophan 5-monooxygenase activation protein, beta polypeptides gil4507949
[Homo sapiens]  [Homo sapiens]
tyrosine 3/tryptophan 5 -monooxygenase activation protein, epsilon Polypeptide [Homo gil5803225  tyrosine 3 / tryptophan 5-monooxygenase activation protein, epsilon polypeptides [Homo gil5803225
sapiens]  sapiens]
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta Polypeptide gil4507951  tyrosine 3-monooxygenase / tryptophan 5-monooxygenase activation protein, eta polypeptides gil4507951
[Homo sapiens]  [Homo sapiens]
gil4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] gil4507961 zinc finger protein 36, C3H type, homologous [Homo sapiens]
gil4827071 zinc finger protein 9 isoform 3 [Homo sapiens] gil4827071 zinc finger protein 9 isoform 3 [Homo sapiens]
gil23510455 zinc finger protein 41 [Homo sapiens] gil23510455 zinc finger protein 41 [Homo sapiens]
gil27545332 zinc finger protein 133 [Homo sapiens] gil27545332 zinc finger protein 133 [Homo sapiens]
gil 145977222 zinc finger protein 154 [Homo sapiens] gil 145977222 zinc finger protein 154 [Homo sapiens]
gil32698678 zinc finger protein 213 [Homo sapiens] gil32698678 zinc finger protein 213 [Homo sapiens]
gill7986283 tubulin, alpha la [Homo sapiens] gill7986283 tubulin, alpha la [Homo sapiens]
gill97333755 interferon-related developmental regulator 2 [Homo sapiens] gill97333755 interferon-related developmental regulator 2 [Homo sapiens]
gil54607089 semaphorin 3B isoform 2 precursor [Homo sapiens] gil54607089 semaphorin 3B isoform 2 precursor [Homo sapiens]
gil4758112 HLA-B associated transcript 1 [Homo sapiens] gil4758112 HLA-B associated transcript 1 [Homo sapiens]
gil4502483 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 [Homo sapiens] gill2962937 achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) [Homo sapiens] gill34142817 esl protein isoform Ib precursor [Homo sapiens] gil4502483 Ras association (RalGDS / AF-6) domain family (N-terminal) member 7 [Homo sapiens] gill2962937 achalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) [Homo sapiens] gill34142817 esl protein isoform Ib precursor [Homo sapiens ]
gil4507691 transformation/transcription domain-associated protein [Homo sapiens] gil4507691 transformation / transcription domain-associated protein [Homo sapiens]
gil4507183 speckle-type POZ protein [Homo sapiens] gil4507183 speckle-type POZ protein [Homo sapiens]
gil7657134 glyceronephosphate O-acyltransferase [Homo sapiens] gil7657134 glycerone phosphate O-acyltransferase [Homo sapiens]
gil32307161 cullin 1 [Homo sapiens] gil32307161 cullin 1 [Homo sapiens]
gil41872527 diacylglycerol kinase zeta isoform 3 [Homo sapiens] gil41872527 diacylglycerol kinase zeta isoform 3 [Homo sapiens]
gil32189362 PTPRF interacting protein alpha 3 [Homo sapiens] gil32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
gil55769587 probable nucleolar complex protein 14 [Homo sapiens] gill 17553627 acetylserotonin O-methyltransferase-like [Homo sapiens] gil55769587 probable nucleolar complex protein 14 [Homo sapiens] gill 17553627 acetylserotonin O-methyltransferase-like [Homo sapiens]
gill89571687 nuclear autoantigen of 14 kDa [Homo sapiens] gill89571687 nuclear autoantigen of 14 kDa [Homo sapiens]
gill6933557 dachsous 1 precursor [Homo sapiens] gill6933557 dachsous 1 precursor [Homo sapiens]
gil4505813 dynein light chain 1 [Homo sapiens] gil4505813 dynein light chain 1 [Homo sapiens]
gil4503525 eukaryotic translation Initiation factor 3, subunit C [Homo sapiens] gil4503525 eukaryotic translation Initiation factor 3, subunit C [Homo sapiens]
gil4503523 eukaryotic translation Initiation factor 3 subunit D [Homo sapiens] gil4503523 eukaryotic translation Initiation factor 3 subunit D [Homo sapiens]
gil4503515 eukaryotic translation Initiation factor 3, subunit 3 gamma, 40kDa [Homo sapiens] gil4507285 syntaxin 10 [Homo sapiens] gil4503515 eukaryotic translation Initiation factor 3, subunit 3 gamma, 40kDa [Homo sapiens] gil4507285 syntaxin 10 [Homo sapiens]
gil4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens] gil4505705 phosphoprotein enriched in astrocytes 15 [Homo sapiens]
gil4506903 splicing factor, arginine/serine-rich 9 [Homo sapiens] gil4506903 splicing factor, arginine / serine-rich 9 [Homo sapiens]
gil4504079 glycosylphosphatidylinositol anchor attachment protein 1 [Homo sapiens] gil4504079 glycosylphosphatidylinositol anchor attachment protein 1 [Homo sapiens]
gil46909598 a disintegrin and metalloproteinase domain 15 isoform 5 preproprotein [Homo sapiens] gil4505229 Fas-associated via death domain [Homo sapiens] gil46909598 a disintegrin and metalloproteinase domain 15 isoform 5 preproprotein [Homo sapiens] gil4505229 Fas-associated via death domain [Homo sapiens]
gil47933379 N-ethylmaleimide-sensitive factor attachment protein, alpha [Homo sapiens] gill9923191 minichromosome maintenance complex component 3 associated protein [Homo sapiens] gill4210504 adaptor-related protein complex 1, mu 1 subunit isoform 2 [Homo sapiens] gil4507913 Wiskott-Aldrich Syndrome protein family member 1 [Homo sapiens] gil47933379 N-ethylmaleimide-sensitive factor attachment protein, alpha [Homo sapiens] gill9923191 minichromosome maintenance complex component 3 associated protein [Homo sapiens] gill4210504 adaptor-related protein complex 1, mu 1 subunit isoform 2 [Homo sapiens] gil4507913 Wiskott-Aldrich Syndrome protein family member 1 [Homo sapiens]
gil48762942 huntingtin interacting protein- 1 -related [Homo sapiens] gil48762942 huntingtin interacting protein-1 -related [Homo sapiens]
gil78000181 ribosomal protein L14 [Homo sapiens] gil78000181 ribosomal protein L14 [Homo sapiens]
gill 1141861 claudin 9 [Homo sapiens] gill 1141861 claudin 9 [Homo sapiens]
gill 15527080 metastasis associated protein [Homo sapiens] gill 15527080 metastasis associated protein [Homo sapiens]
gil4759276 RNA, U3 small nucleolar interacting protein 2 [Homo sapiens] gil4759276 RNA, U3 small nucleolar interacting protein 2 [Homo sapiens]
gill90358517 RAB 11B, member RAS oncogene family [Homo sapiens] gill90358517 RAB 11B, member RAS oncogene family [Homo sapiens]
gi:284005309 ATP-dependent DNA helicase Q4 [Homo sapiens] gi: 284005309 ATP-dependent DNA helicase Q4 [Homo sapiens]
gil3834621 homer-3 [Homo sapiens] gil3834621 homer-3 [Homo sapiens]
gill0834682 PP3958 [Homo sapiens] gill0834682 PP3958 [Homo sapiens]
gil33695117 p53-induced protein [Homo sapiens] gil33695117 p53-induced protein [Homo sapiens]
gill 18344454 sperm associated antigen 7 [Homo sapiens] gill 18344454 sperm associated antigen 7 [Homo sapiens]
gil4758496 H2A histone family, member Y isoform 2 [Homo sapiens] gil4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
gill95927015 phosphatidylinositol transfer protein, membrane-associated isoform a [Homo sapiens] gill 16256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens] gill95927015 phosphatidylinositol transfer protein, membrane-associated isoform a [Homo sapiens] gill 16256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
gil22027622 TNF receptor-associated factor 4 [Homo sapiens] gil22027622 TNF receptor-associated factor 4 [Homo sapiens]
gil57242774 hypothetical protein LOC9703 [Homo sapiens] gil57242774 hypothetical protein LOC9703 [Homo sapiens]
gil7661916 lysosomal protein transmembrane 4 alpha [Homo sapiens] gil7661916 lysosomal protein transmembrane 4 alpha [Homo sapiens]
gil7661890 sorting nexin 17 [Homo sapiens] gil7661890 sorting nexin 17 [Homo sapiens]
gill7999539 DEAH (Asp-Glu-Ala-His) box Polypeptide 38 [Homo sapiens] gill7999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapiens]
gil55769518 inositol hexakisphosphate kinase 1 isoform 2 [Homo sapiens] gil55769518 inositol hexakisphosphate kinase 1 isoform 2 [Homo sapiens]
gill 10624774 mannose receptor, C type 2 [Homo sapiens] gill 10624774 mannose receptor, C type 2 [Homo sapiens]
gil55925608 kelch-like 21 [Homo sapiens] gil55925608 kelch-like 21 [Homo sapiens]
gill51108509 Rho GTPase-activating protein RICH2 [Homo sapiens] gill51108509 Rho GTPase activating protein RICH2 [Homo sapiens]
gil55770886 ubiquitin specific protease 3 [Homo sapiens] gil55770886 ubiquitin specific protease 3 [Homo sapiens]
gill4110407 heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens] gil62750347 histone deacetylase 5 isoform 1 [Homo sapiens] gill4110407 heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens] gil62750347 histone deacetylase 5 isoform 1 [Homo sapiens]
gill94294519 nuclear receptor subfamily 1, group H, member 3 isoform c [Homo sapiens] gil65301139 ATPase, class II, type 9A [Homo sapiens] gill94294519 nuclear receptor subfamily 1, group H, member 3 isoform c [Homo sapiens] gil65301139 ATPase, class II, type 9A [Homo sapiens]
gil5031595 actin related protein 2/3 complex subunit 4 isoform a [Homo sapiens] gil5031595 actin related protein 2/3 complex subunit 4 isoform a [Homo sapiens]
gil6912540 nucleotide binding protein 2 (MinD homolog, E. coli) [Homo sapiens] gil6912540 nucleotide binding protein 2 (MinD homologue, E. coli) [Homo sapiens]
gil5031569 ARP1 actin-related protein 1 homolog A, centractin alpha [Homo sapiens] gil5031569 ARP1 actin-related protein 1 homologue A, centractin alpha [Homo sapiens]
gill55722983 TNF receptor-associated protein 1 [Homo sapiens] gill55722983 TNF receptor-associated protein 1 [Homo sapiens]
gill21114294 RAS p21 protein activator 4 isoform 1 [Homo sapiens] gill21114294 RAS p21 protein activator 4 isoform 1 [Homo sapiens]
gil5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1 [Homo sapiens] gil5032031 RNA binding motif protein 5 [Homo sapiens] gil5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1 [Homo sapiens] gil5032031 RNA binding motif protein 5 [Homo sapiens]
gil5032133 eukaryotic translation Initiation factor 1 [Homo sapiens] gil5032133 eukaryotic translation Initiation factor 1 [Homo sapiens]
RecName: Full=Major facilitator superfamily domain-containing protein 10; AltName: gil74735668  RecName: Full = Major facilitator superfamily domain-containing protein 10; AltName: gil74735668
Full=Tetracycline transporter-like protein  Full = Tetracycline transporter-like protein
gil5031669 cyclin-dependent kinase 2 associated protein 2 [Homo sapiens] gil5031669 cyclin-dependent kinase 2 associated protein 2 [Homo sapiens]
gil56181387 STIP1 homology and U-box containing protein 1 [Homo sapiens] gil56181387 STIP1 homology and U-box containing protein 1 [Homo sapiens]
gil95147542 amyloid beta precursor protein-binding, family B, member 3 isoform a [Homo sapiens] gill 16256481 TNFAIP3 interacting protein 1 [Homo sapiens] gil95147542 amyloid beta precursor protein-binding, family B, member 3 isoform a [Homo sapiens] gill 16256481 TNFAIP3 interacting protein 1 [Homo sapiens]
gil57013276 tubulin, alpha, ubiquitous [Homo sapiens] gil57013276 tubulin, alpha, ubiquitous [Homo sapiens]
gil50592996 tubulin, beta, 4 [Homo sapiens] gil50592996 tubulin, beta, 4 [Homo sapiens]
gil21361322 tubulin, beta 4 [Homo sapiens] gil21361322 tubulin, beta 4 [Homo sapiens]
gil5174735 tubulin, beta, 2 [Homo sapiens] gil5174735 tubulin, beta, 2 [Homo sapiens]
gil37655183 N-myc downstream regulated 1 [Homo sapiens] gil37655183 N-myc downstream regulated 1 [Homo sapiens]
gil5174447 guanine nucleotide binding protein (G protein), beta Polypeptide 2-like 1 [Homo sapiens] gil5454064 RNA binding motif protein 14 [Homo sapiens] gil5174447 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1 [Homo sapiens] gil5454064 RNA binding motif protein 14 [Homo sapiens]
gill7136143 olfactomedin related ER localized protein isoform 1 [Homo sapiens] gill7136143 olfactomedin related ER localized protein isoform 1 [Homo sapiens]
gil29893564 microspherule protein 1 isoform 1 [Homo sapiens] gil29893564 microspherule protein 1 isoform 1 [Homo sapiens]
gil5174723 translocase of outer mitochondrial membrane 40 [Homo sapiens] gil5174723 translocase of outer mitochondrial membrane 40 [Homo sapiens]
gil9257197 BAU -associated protein 2 isoform 1 [Homo sapiens] gil9257197 BAU -associated protein 2 isoform 1 [Homo sapiens]
gill9923354 zinc finger protein 238 isoform 2 [Homo sapiens] gill9923354 zinc finger protein 238 isoform 2 [Homo sapiens]
gil23397429 eukaryotic translation Initiation factor 3, subunit M [Homo sapiens] gil23397429 eukaryotic translation Initiation factor 3, subunit M [Homo sapiens]
gil5453595 adenylyl cyclase-associated protein [Homo sapiens] gil5453595 adenylyl cyclase-associated protein [Homo sapiens]
gil5454166 vesicle transport through interaction with t-SNAREs 1B [Homo sapiens] gil5454166 vesicle transport through interaction with t-SNAREs 1B [Homo sapiens]
gill 8379349 vesicle amine transport protein 1 [Homo sapiens] gill 8379349 vesicle amine transport protein 1 [Homo sapiens]
gil6102858 hypothetical protein [Homo sapiens] gil6102858 hypothetical protein [Homo sapiens]
gil36287060 K(lysine) acetyltransferase 5 isoform 3 [Homo sapiens] gil36287060 K (lysine) acetyltransferase 5 isoform 3 [Homo sapiens]
gil5453838 Sjögren syndrome/scleroderma autoantigen 1 [Homo sapiens] gil5453838 Sjögren syndrome / scleroderma autoantigen 1 [Homo sapiens]
gil95113651 glutaredoxin 3 [Homo sapiens] gil95113651 glutaredoxin 3 [Homo sapiens]
gil5453629 dynactin 2 [Homo sapiens] gil5453629 dynactin 2 [Homo sapiens]
gil26051229 mitochondrial ribosomal protein L28 [Homo sapiens] gil26051229 mitochondrial ribosomal protein L28 [Homo sapiens]
gil58331185 chaperonin containing TCP1, subunit 7 isoform b [Homo sapiens] gil58331185 chaperonin containing TCP1, subunit 7 isoform b [Homo sapiens]
gill97383077 PDZ and LIM domain 5 isoform a [Homo sapiens] gill97383077 PDZ and LIM domain 5 isoform a [Homo sapiens]
gil32454737 tripartite motif-containing 3 [Homo sapiens] gill71184421 thioredoxin interacting protein [Homo sapiens] gil32454737 tripartite motif-containing 3 [Homo sapiens] gill71184421 thioredoxin interacting protein [Homo sapiens]
gil5454030 RAS-related on chromosome 22 isoform a [Homo sapiens] gil5454030 RAS-related on chromosome 22 isoform a [Homo sapiens]
gil5729794 CUG triplet repeat, RNA-binding protein 1 isoform 1 [Homo sapiens] gil5729794 CUG triplet repeat, RNA-binding protein 1 isoform 1 [Homo sapiens]
gill0835246 Kruppel-like factor 1 (erythroid) [Homo sapiens] gill0835246 Kruppel-like factor 1 (erythroid) [Homo sapiens]
gil5729999 Ras-related GTP binding A [Homo sapiens] gil5729999 Ras-related GTP binding A [Homo sapiens]
gil5729953 nuclear distribution gene C homolog [Homo sapiens] gil5729953 nuclear distribution gene C homologue [Homo sapiens]
gil38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1 [Homo sapiens] gil38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1 [Homo sapiens]
gil28269672 serologically defined colon Cancer antigen 8 [Homo sapiens] gil28269672 serologically defined colon Cancer antigen 8 [Homo sapiens]
gil42544159 heat shock 105kD [Homo sapiens] gil42544159 heat shock 105kD [Homo sapiens]
gil5729875 progesterone receptor membrane component 1 [Homo sapiens] gil5729875 progesterone receptor membrane component 1 [Homo sapiens]
gil5730015 RUN domain containing 3A [Homo sapiens] gil5730015 RUN domain containing 3A [Homo sapiens]
gill9387846 melanoma antigen family D, 2 [Homo sapiens] gill9387846 melanoma antigen family D, 2 [Homo sapiens]
gil5802970 AFG3 ATPase family gene 3-like 2 [Homo sapiens] gil5802970 AFG3 ATPase family genes 3-like 2 [Homo sapiens]
gil5803023 lectin, mannose-binding 2 precursor [Homo sapiens] gil5803023 lectin, mannose-binding 2 precursor [Homo sapiens]
gil5803013 endoplasmic reticulum protein 29 isoform 1 precursor [Homo sapiens] gil5803013 endoplasmic reticulum protein 29 isoform 1 precursor [Homo sapiens]
gil5870893 sohlte carrier family 38, member 3 [Homo sapiens] gil5870893 sohlte carrier family 38, member 3 [Homo sapiens]
gill66795250 kinesin family member 2C [Homo sapiens] gill66795250 kinesin family member 2C [Homo sapiens]
gil33286446 Opioid growth factor receptor [Homo sapiens] gil33286446 Opioid growth factor receptor [Homo sapiens]
gil34850061 superiorcervical ganglia, neural specific 10 [Homo sapiens] gil34850061 superiorcervical ganglia, neural specific 10 [Homo sapiens]
gill6554627 WD repeat domain 5 [Homo sapiens] gill6554627 WD repeat domain 5 [Homo sapiens]
gil66472382 nischarin [Homo sapiens] gil66472382 nischarin [Homo sapiens]
gil6005860 ribosomal protein L35 [Homo sapiens] gil6005860 ribosomal protein L35 [Homo sapiens]
gil9966764 lysophospholipase II [Homo sapiens] gil9966764 lysophospholipase II [Homo sapiens]
gil45446743 DE AD box Polypeptide 42 protein [Homo sapiens] gil45446743 DE AD box polypeptides 42 protein [Homo sapiens]
gil32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens] gil32528286 acyl-CoA thioesterase 7 isoform hBACHd [Homo sapiens]
gil6005764 GABA(A) receptor-associated protein [Homo sapiens] gil6005764 GABA (A) receptor-associated protein [Homo sapiens]
gill 1559929 coatomer protein complex, subunit gamma 1 [Homo sapiens] gill 1559929 coatomer protein complex, subunit gamma 1 [Homo sapiens]
gill7978512 poly-U binding splicing factor 60KDa isoform a [Homo sapiens] gill7978512 poly-U binding splicing factor 60KDa isoform a [Homo sapiens]
gil41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] gil41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
gi|41349441 SEC31 homolog A isoform 2 [Homo sapiens] gi | 41349441 SEC31 homologue A isoform 2 [Homo sapiens]
gil57242755 calsyntenin 1 isoform 2 [Homo sapiens] gil57242755 calsyntenin 1 isoform 2 [Homo sapiens]
gil20336290 DEAH (Asp-Glu-Ala-His) box Polypeptide 30 isoform 2 [Homo sapiens] gil20336290 DEAH (Asp-Glu-Ala-His) box polypeptides 30 isoform 2 [Homo sapiens]
RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) short isoform gil21396480  RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) short isoform gil21396480
[Homo sapiens]  [Homo sapiens]
gil66932902 SREBF chaperone protein [Homo sapiens] gil66932902 SREBF chaperone protein [Homo sapiens]
gil58761546 amine oxidase (flavin containing) domain 2 isoform b [Homo sapiens] gil58761546 amine oxidase (flavin containing) domain 2 isoform b [Homo sapiens]
gil42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens] gil42516565 ubiquitin specific protease 33 isoform 2 [Homo sapiens]
gil83716024 kinesin family member 21B [Homo sapiens] gil83716024 kinesin family member 21B [Homo sapiens]
gil24307983 FtsJ methyltransferase domain containing 2 [Homo sapiens] gil24307983 FtsJ methyltransferase domain containing 2 [Homo sapiens]
gill22937251 jumonji domain containing 3, histone lysine demethylase [Homo sapiens] gill22937251 jumonji domain containing 3, histone lysine demethylase [Homo sapiens]
gill55722994 zinc finger CCCH-type containing 3 [Homo sapiens] gill55722994 zinc finger CCCH-type containing 3 [Homo sapiens]
gil67763814 death-inducing-protein [Homo sapiens] gill 12421108 capicua homolog [Homo sapiens] gil67763814 death inducing protein [Homo sapiens] gill 12421108 capicua homolog [Homo sapiens]
gill54689719 hypothetical protein LOC23231 [Homo sapiens] gill54689719 hypothetical protein LOC23231 [Homo sapiens]
gil21327667 block of proliferation 1 [Homo sapiens] gil21327667 block of proliferation 1 [Homo sapiens]
gil62241044 exocyst complex component 7 isoform b [Homo sapiens] gil62241044 exocyst complex component 7 isoform b [Homo sapiens]
gil82659109 retinoblastoma-associated factor 600 [Homo sapiens] gil82659109 retinoblastoma-associated factor 600 [Homo sapiens]
gil21624607 coactosin-like 1 [Homo sapiens] gil21624607 coactosin-like 1 [Homo sapiens]
gill 8034692 CDW92 antigen [Homo sapiens] gill 8034692 CDW92 antigen [Homo sapiens]
gil7657455 pescadillo homolog 1, containing BRCT domain [Homo sapiens] gil7657455 pescadillo homolog 1 containing BRCT domain [Homo sapiens]
gil45827731 scribble isoform a [Homo sapiens] gil45827731 scribble isoform a [Homo sapiens]
gil6912458 calcineurin binding protein 1 [Homo sapiens] gil6912458 calcineurin binding protein 1 [Homo sapiens]
gil6912674 SNAP-associated protein [Homo sapiens] gil6912674 SNAP-associated protein [Homo sapiens]
gil7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens] gil7524354 dimethylarginine dimethylaminohydrolase 2 [Homo sapiens]
gill64519084 RAB GTPase activating protein 1 [Homo sapiens] gill64519084 RAB GTPase activating protein 1 [Homo sapiens]
gill 12363070 hsp70-interacting protein [Homo sapiens] gill 12363070 hsp70-interacting protein [Homo sapiens]
gil72534684 phospholipase D family, member 3 [Homo sapiens] gil72534684 phospholipase D family, member 3 [Homo sapiens]
gil6912490 transcription factor MAFF [Homo sapiens] gil6912490 transcription factor MAFF [Homo sapiens]
gil52630440 FK506-binding protein 8 [Homo sapiens] gil52630440 FK506-binding protein 8 [Homo sapiens]
gil7657345 mitochondrial carrier homolog 1 [Homo sapiens] gil7657345 mitochondrial carrier homolog 1 [Homo sapiens]
gill69790811 SHC (Src homology 2 domain containing) transforming protein 2 [Homo sapiens] gil6912586 6-phosphogluconolactonase [Homo sapiens] gill69790811 SHC (Src homology 2 domain containing) transforming protein 2 [Homo sapiens] gil6912586 6-phosphogluconolactonase [Homo sapiens]
gil6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens] gil6912238 peroxiredoxin 5 isoform a precursor [Homo sapiens]
gil4507975 zinc finger protein 345 [Homo sapiens] gil4507975 zinc finger protein 345 [Homo sapiens]
gil32698704 hypothetical protein LOC25851 [Homo sapiens] gil32698704 hypothetical protein LOC25851 [Homo sapiens]
gill7530785 breast Cancer metastasis suppressor 1 isoform 1 [Homo sapiens] gill7530785 breast cancer metastasis suppressor 1 isoform 1 [Homo sapiens]
gil36796743 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like [Homo sapiens] gil20070260 cofactor of BRCA1 [Homo sapiens] gil36796743 methylenetetrahydrofolate dehydrogenase (NADP + dependent) 1-like [Homo sapiens] gil20070260 cofactor of BRCA1 [Homo sapiens]
gill95972913 nasal embryonic LHRH factor isoform d [Homo sapiens] gill95972913 nasal embryonic LHRH factor isoform d [Homo sapiens]
gil7661696 hypothetical protein LOC26017 [Homo sapiens] gil7661696 hypothetical protein LOC26017 [Homo sapiens]
gil5911953 hypothetical protein [Homo sapiens] gil5911953 hypothetical protein [Homo sapiens]
gil41872443 TRPC4-associated protein isoform b [Homo sapiens] gil41872443 TRPC4-associated protein isoform b [Homo sapiens]
gil31542521 N-acetyltransferase 9 (GCN5 -related, putative) [Homo sapiens] gil31542521 N-acetyltransferase 9 (GCN5 -related, putative) [Homo sapiens]
gill50170699 kinesin family member 26A [Homo sapiens] gill50170699 kinesin family member 26A [Homo sapiens]
gil28416431 GTPase, IMAP family member 2 [Homo sapiens] gil28416431 GTPase, IMAP family member 2 [Homo sapiens]
gil215277017 protein tyrosine Phosphatase, non-receptor type 18 isoform 2 [Homo sapiens] gil46367787 poly(A) binding protein, cytoplasmic 1 [Homo sapiens] gil215277017 protein tyrosine phosphatase, non-receptor type 18 isoform 2 [Homo sapiens] gil46367787 poly (A) binding protein, cytoplasmic 1 [Homo sapiens]
gil7656952 calcyclin binding protein isoform 1 [Homo sapiens] gil7656952 calcycline binding protein isoform 1 [Homo sapiens]
gil7657599 sorting nexin 5 [Homo sapiens] gil7657599 sorting nexin 5 [Homo sapiens]
gill48727368 bromodomain and PHD finger containing, 3 [Homo sapiens] gill48727368 bromodomain and PHD finger containing, 3 [Homo sapiens]
gil7657514 GTP-binding protein RH06 [Homo sapiens] gil7657514 GTP-binding protein RH06 [Homo sapiens]
gil 140560994 growth Inhibition and differentiation related protein 86 [Homo sapiens] gil 140560994 growth inhibition and differentiation related protein 86 [Homo sapiens]
gill66235178 PDZ and LIM domain protein 3 isoform b [Homo sapiens] gill66235178 PDZ and LIM domain protein 3 isoform b [Homo sapiens]
gil7657196 zinc finger protein 330 [Homo sapiens] gil7657381 PRP19/PS04 pre-mRNA processing factor 19 homolog [Homo sapiens] gil7657196 zinc finger protein 330 [Homo sapiens] gil7657381 PRP19 / PS04 pre-mRNA processing factor 19 homolog [Homo sapiens]
gil7019519 proprotein convertase subtilisin/kexin type 1 inhibitor precursor [Homo sapiens] gil7019519 proprotein convertase subtilisin / kexin type 1 inhibitor precursor [Homo sapiens]
gil7661734 mRNA decapping enzyme [Homo sapiens] gil7661734 mRNA decapping enzyme [Homo sapiens]
gil7661744 basic leucine zipper and W2 domains 2 [Homo sapiens] gil7661744 basic leucine zipper and W2 domains 2 [Homo sapiens]
gi|27414497 zinc finger CCCH-type containing 7A [Homo sapiens] gi | 27414497 zinc finger CCCH-type containing 7A [Homo sapiens]
gil40548422 chromatin modifying protein 4A [Homo sapiens] gil40548422 chromatin modifying protein 4A [Homo sapiens]
gil8392875 transcription factor IIB [Homo sapiens] gil8392875 transcription factor IIB [Homo sapiens]
gil58761502 GTP-binding protein PTD004 isoform 2 [Homo sapiens] gil58761502 GTP-binding protein PTD004 isoform 2 [Homo sapiens]
gil54607124 RNA binding motif protein 15B [Homo sapiens] gil54607124 RNA binding motif protein 15B [Homo sapiens]
gill94248095 epsin 1 isoform b [Homo sapiens] gill94248095 epsin 1 isoform b [Homo sapiens]
gil8574093 GLTSCR2, glioma tumor suppressor candidate region protein 2 (AF182076_1) [Homo sapiens] gil7305503 stomatin (EPB72)-like 2 [Homo sapiens] gil8574093 GLTSCR2, glioma tumor suppressor candidate region protein 2 (AF182076_1) [Homo sapiens] gil7305503 stomatin (EPB72) -like 2 [Homo sapiens]
gil7657465 podocalyxin-like 2 [Homo sapiens] gil7657465 podocalyxin-like 2 [Homo sapiens]
gil 14670375 SCGIO-like-protein [Homo sapiens] gil 14670375 SCGIO-like-protein [Homo sapiens]
gil7705716 nitric oxide synthase interacting protein [Homo sapiens] gil7705716 nitric oxide synthase interacting protein [Homo sapiens]
gil56676379 intraflagellar transport 52 homolog [Homo sapiens] gil56676379 intraflagellar transport 52 homolog [Homo sapiens]
gill66795285 coenzyme Q4 homolog [Homo sapiens] gill66795285 coenzyme Q4 homolog [Homo sapiens]
gil7705851 coiled-coil-helix-coiled-coil-helix domain containing 2 [Homo sapiens] gil7705851 coiled-coil-helix-coiled-coil-helix domain containing 2 [Homo sapiens]
gill89083821 inhibitor of growth family, member 4 isoform 9 [Homo sapiens] gill89083821 inhibitor of growth family, member 4 isoform 9 [Homo sapiens]
gil7705889 EGF-like-domain, multiple 7 [Homo sapiens] gil7705889 EGF-like-domain, multiple 7 [Homo sapiens]
gill56142184 ankyrin repeat domain 39 [Homo sapiens] gill56142184 ankyrin repeat domain 39 [Homo sapiens]
gill08773808 hypothetical protein LOC51244 [Homo sapiens] gill08773808 hypothetical protein LOC51244 [Homo sapiens]
gil75677349 poly(A) binding protein interacting protein 2 [Homo sapiens] gil75677349 poly (A) binding protein interacting protein 2 [Homo sapiens]
gil75677385 neugrin, neurite outgrowth associated isoform 2 [Homo sapiens] gil75677385 neugrin, neurite outgrowth associated isoform 2 [Homo sapiens]
processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae), isoform CRA_c [Homo gill 19618613  Processing of precursor 5, ribonuclease P / MRP subunit (S. cerevisiae), isoform CRA_c [Homo gill 19618613
sapiens]  sapiens]
gil7705433 eukaryotic translation Initiation factor 3 subunit 6 interacting protein [Homo sapiens] gil7705294 actin-like 6B [Homo sapiens] gil7705433 eukaryotic translation Initiation factor 3 subunit 6 interacting protein [Homo sapiens] gil7705294 actin-like 6B [Homo sapiens]
gil55769520 inositol hexakisphosphate kinase 2 isoform a [Homo sapiens] gil55769520 inositol hexakisphosphate kinase 2 isoform a [Homo sapiens]
gill56416000 ubiquitin-fold modifier conjugating enzyme 1 [Homo sapiens] gill56416000 ubiquitin-fold modifier conjugating enzyme 1 [Homo sapiens]
gill93788722 hypothetical protein LOC51507 [Homo sapiens] gill93788722 hypothetical protein LOC51507 [Homo sapiens]
gill89409150 chromatin modifying protein 5 [Homo sapiens] gill89409150 chromatin modifying protein 5 [Homo sapiens]
gil7705266 NCK interacting protein with SH3 domain isoform 1 [Homo sapiens] gil7705266 NCK interacting protein with SH3 domain isoform 1 [Homo sapiens]
gil 18777675 APC11 anaphase promoting comp lex subunit 11 isoform 2 [Homo sapiens] gil 18777675 APC11 anaphase promoting comp lex subunit 11 isoform 2 [Homo sapiens]
gil7706284 HMP19 protein [Homo sapiens] gil7706284 HMP19 protein [Homo sapiens]
gil7706359 RAS, dexamethasone-induced 1 [Homo sapiens] gil7706359 RAS, dexamethasone-induced 1 [Homo sapiens]
gil7706429 trafficking protein particle complex 2-like [Homo sapiens] gil7706429 trafficking protein particle complex 2-like [Homo sapiens]
gil49574502 NAD(P)H:quinone oxidoreductase type 3, Polypeptide A2 [Homo sapiens] gil49574502 NAD (P) H: quinone oxidoreductase type 3, polypeptides A2 [Homo sapiens]
gil 134947986 zinc finger protein 44 [Homo sapiens] gil 134947986 zinc finger protein 44 [Homo sapiens]
gil20336313 B-cell CLL/lymphoma 11 A isoform 3 [Homo sapiens] gil20336313 B-cell CLL / lymphoma 11 A isoform 3 [Homo sapiens]
gil33695090 prostate tumor overexpressed 1 [Homo sapiens] gil33695090 prostate tumor overexpressed 1 [Homo sapiens]
gill 1612655 FXYD domain-containing ion transport regulator 6 [Homo sapiens] gil82830424 gon-4-like isoform a [Homo sapiens] gill 1612655 FXYD domain-containing ion transport regulator 6 [Homo sapiens] gil82830424 gon-4-like isoform a [Homo sapiens]
gill57388902 semaphorin 4C [Homo sapiens] gill57388902 semaphorin 4C [Homo sapiens]
gil8923417 ADP-ribosylhydrolase like 2 [Homo sapiens] gil8923417 ADP-ribosylhydrolase like 2 [Homo sapiens]
gil57863312 uridine-cytidine kinase 1-like 1 [Homo sapiens] gil57863312 uridine-cytidine kinase 1-like 1 [homo sapiens]
gill94018570 coiled-coil domain containing 109B [Homo sapiens] gill94018570 coiled-coil domain containing 109B [Homo sapiens]
gill57388917 FEZ family zinc finger 2 [Homo sapiens] gill57388917 FEZ family zinc finger 2 [Homo sapiens]
GL268832172 ATP synthase subunit s-like protein isoform 4 [Homo sapiens]  GL268832172 ATP synthase subunit s-like protein isoform 4 [Homo sapiens]
gil38146111 DALR anticodon binding domain containing 3 isoform 2 [Homo sapiens] gil39780571 misato [Homo sapiens] gil38146111 DALR anticodon binding domain containing 3 isoform 2 [Homo sapiens] gil39780571 misato [Homo sapiens]
gil8922794 U3 snoRNP protein 3 homolog [Homo sapiens] gil8922794 U3 snoRNP protein 3 homologous [Homo sapiens]
gil37537687 zinc finger protein 444 [Homo sapiens] gil37537687 zinc finger protein 444 [Homo sapiens]
gil218751874 hairy and enhancer of split 6 isoform b [Homo sapiens] gil218751874 hairy and enhancer of split 6 isoform b [Homo sapiens]
gil8923920 H2A histone family, member Y2 [Homo sapiens] gil8923920 H2A histone family, member Y2 [Homo sapiens]
gil209977067 OTU domain containing 5 isoform c [Homo sapiens] gil209977067 OTU domain containing 5 isoform c [Homo sapiens]
gil7020625 unnamed protein product [Homo sapiens] gil7020625 unnamed protein product [Homo sapiens]
gil209862873 zinc finger protein 692 isoform 1 [Homo sapiens] gil209862873 zinc finger protein 692 isoform 1 [Homo sapiens]
gil8922328 RNA binding motif protein 22 [Homo sapiens] gil8922328 RNA binding motif protein 22 [Homo sapiens]
gil40806225 zinc finger protein 64 isoform b [Homo sapiens] gil40806225 zinc finger protein 64 isoform b [Homo sapiens]
gill7999541 vacuolar protein sorting 35 [Homo sapiens] gill7999541 vacuolar protein sorting 35 [Homo sapiens]
gil30410720 exocyst complex component 1 isoform 1 [Homo sapiens] gil30410720 exocyst complex component 1 isoform 1 [Homo sapiens]
gil8922867 hypothetical protein LOC55776 [Homo sapiens] gil8922867 hypothetical protein LOC55776 [Homo sapiens]
gil209976986 PCI domain containing 2 [Homo sapiens] gil209976986 PCI domain containing 2 [Homo sapiens]
gil8923898 zinc finger protein 313 [Homo sapiens] gil8923898 zinc finger protein 313 [Homo sapiens]
gill3123776 DNA methyltransferase 1 associated protein 1 [Homo sapiens] gill3123776 DNA methyltransferase 1 associated protein 1 [Homo sapiens]
gil9790193 reprimo, TP53 dependant G2 arrest mediator candidate [Homo sapiens] gil9790193 reprimo, TP53 dependent G2 arrest mediator candidate [Homo sapiens]
gil9050060 NPDC-1 [Homo sapiens] gil9050060 NPDC-1 [Homo sapiens]
gill 1034855 TMEM9 domain family, member B [Homo sapiens] gill 1034855 TMEM9 domain family, member B [Homo sapiens]
gill 19608262 SH3-domain GRB2-like endophilin B2, isoform CRA_b [Homo sapiens] gi|47174864 exosome component Rrp46 [Homo sapiens] gill 19608262 SH3-domain GRB2-like endophilin B2, isoform CRA_b [Homo sapiens] g i | 47174864 exosome component Rrp46 [Homo sapiens]
gil57863279 Meisl, myeloid ecotropic viral Integration site 1 homolog 3 isoform 2 [Homo sapiens] gil94536838 poly (ADP-ribose) Polymerase family, member 6 [Homo sapiens] gil57863279 Meisl, myeloid ecotropic viral Integration site 1 homologue 3 isoform 2 [Homo sapiens] gil94536838 poly (ADP-ribose) polymerase family, member 6 [Homo sapiens]
gill 16174742 family with sequence similarity 20, member C [Homo sapiens] gill 16174742 family with sequence similarity 20, member C [Homo sapiens]
gil9910382 mitochondrial import receptor Tom22 [Homo sapiens] gil9910382 mitochondrial import receptor Tom22 [Homo sapiens]
gill97100773 arginyl-tRNA synthetase 2, mitochondrial precursor [Homo sapiens] gill97100773 arginyl-tRNA synthetase 2, mitochondrial precursor [Homo sapiens]
gil23943862 N-acetyltransferase 14 (GCN5 -related, putative) [Homo sapiens] gil23943862 N-acetyltransferase 14 (GCN5 -related, putative) [Homo sapiens]
gil 140560988 zinc finger protein SBZF3 [Homo sapiens] gil 140560988 zinc finger protein SBZF3 [Homo sapiens]
gil21704283 junctophilin 3 [Homo sapiens] gil21704283 junctophilin 3 [Homo sapiens]
gill0190720 NmrA-like family domain containing 1 [Homo sapiens] gill0190720 NmrA-like family domain containing 1 [Homo sapiens]
gil 149274653 patched domain containing 2 [Homo sapiens] gil 149274653 patched domain containing 2 [Homo sapiens]
gil33469964 splicing factor 4 [Homo sapiens] gil33469964 splicing factor 4 [Homo sapiens]
gil 145275185 MYG1 protein [Homo sapiens] gil 145275185 MYG1 protein [Homo sapiens]
gil70778869 invasion inhibitory protein 45 [Homo sapiens] gill92449449 ubiquitin-conjugating enzyme E20 [Homo sapiens] gil70778869 invasion inhibitory protein 45 [Homo sapiens] gill92449449 ubiquitin-conjugating enzyme E20 [Homo sapiens]
gill49158725 N-terminal EF-hand calcium binding protein 3 isoform 1 [Homo sapiens] gill49158725 N-terminal EF-hand calcium binding protein 3 isoform 1 [Homo sapiens]
gil74048537 praja 1 isoform b [Homo sapiens] gil74048537 praja 1 isoform b [Homo sapiens]
gil84626578 G protein beta subunit-like [Homo sapiens] gil84626578 G protein beta subunit-like [Homo sapiens]
gill 1968051 nuclear prelamin A recognition factor-like [Homo sapiens] gill 1968051 nuclear prelamin A recognition factor-like [Homo sapiens]
gil 18027756 unknown [Homo sapiens] gil 18027756 unknown [Homo sapiens]
gil40255020 hypothetical protein LOC64769 [Homo sapiens] gil40255020 hypothetical protein LOC64769 [Homo sapiens]
gill2383064 fibronectin type III domain containing 4 [Homo sapiens] gill2383064 fibronectin type III domain containing 4 [Homo sapiens]
gill2597653 5'-nucleotidase domain containing 2 isoform 2 [Homo sapiens] gill2597653 5'-nucleotidase domain containing 2 isoform 2 [Homo sapiens]
gill5721937 mitochondrial ribosomal protein S24 [Homo sapiens] gill5721937 mitochondrial ribosomal protein S24 [Homo sapiens]
gill6554609 mitochondrial ribosomal protein S i l isoform a [Homo sapiens] gill6554609 mitochondrial ribosomal protein S i l isoform a [Homo sapiens]
gill4165272 PTEN induced putative kinase 1 precursor [Homo sapiens] gill4165272 PTEN induced putative kinase 1 precursor [Homo sapiens]
gil 130978962 adrenocortical dysplasia homolog isoform 2 [Homo sapiens] gil 130978962 adrenocortical dysplasia homologous isoform 2 [Homo sapiens]
gill45580615 KRI1 homolog [Homo sapiens] gill45580615 KRI1 homolog [Homo sapiens]
gill3491174 MARCKS-like 1 [Homo sapiens] gill3491174 MARCKS-like 1 [Homo sapiens]
gil32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] gil32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
gil38196969 ZSCAN18 protein [Homo sapiens] gil38196969 ZSCAN18 protein [Homo sapiens]
gil30581160 ganglioside-induced differentiation-associated protein 1-like 1 [Homo sapiens] gill3128992 hypothetical protein MGC2803 [Homo sapiens] gil30581160 ganglioside-induced differentiation-associated protein 1-like 1 [Homo sapiens] gill3128992 hypothetical protein MGC2803 [Homo sapiens]
gil 148596996 CUE domain containing 2 [Homo sapiens] gil 148596996 CUE domain containing 2 [Homo sapiens]
gill3129000 meteorin, glial cell differentiation regulator [Homo sapiens] gill3129000 meteorin, glial cell differentiation regulator [Homo sapiens]
gill3129004 GIY-YIG domain containing 2 isoform 1 [Homo sapiens] gill3129004 GIY-YIG domain containing 2 isoform 1 [Homo sapiens]
gil83776596 CaM kinase-like vesicle-associated [Homo sapiens] gil83776596 CaM kinase-like vesicle-associated [Homo sapiens]
gill3129128 hypothetical protein LOC79095 [Homo sapiens] gill3129128 hypothetical protein LOC79095 [Homo sapiens]
gill3236587 transmembrane protein 43 [Homo sapiens] gill3236587 transmembrane protein 43 [Homo sapiens]
gill70932471 hypothetical protein LOC79703 [Homo sapiens] gill70932471 hypothetical protein LOC79703 [Homo sapiens]
gill46198654 zinc finger protein 768 [Homo sapiens] gill46198654 zinc finger protein 768 [Homo sapiens]
gill3376339 plasticity-related protein 2 [Homo sapiens] gill3376339 plasticity-related protein 2 [Homo sapiens]
gill86910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens] gill86910323 hypothetical protein LOC79969 isoform 2 [Homo sapiens]
gil47174859 tripartite motif-containing 46 [Homo sapiens] gil47174859 tripartite motif-containing 46 [Homo sapiens]
gill 1640560 MSTP016 [Homo sapiens] gill 1640560 MSTP016 [Homo sapiens]
gil41872403 flavin adenine dinucleotide synthetase isoform 2 [Homo sapiens] gil41872403 flavin adenine dinucleotide synthetase isoform 2 [Homo sapiens]
gil 18027792 unknown [Homo sapiens] gil 18027792 unknown [Homo sapiens]
gil 13540531 integrin-linked kinase-associated protein Phosphatase 2C [Homo sapiens] gil 13540531 integrin-linked kinase-associated protein phosphatase 2C [Homo sapiens]
gil21915167 glutamate receptor, ionotropic, N-methyl D-aspartate-like 1 A isoform 1 [Homo sapiens] gil21361947 stathmin-like 4 [Homo sapiens] gil21915167 glutamate receptor, ionotropic, N-methyl D-aspartate-like 1 A isoform 1 [Homo sapiens] gil21361947 stathmin-like 4 [Homo sapiens]
gil 13540594 lectin, mannose-binding 2-like isoform 2 [Homo sapiens] gil 13540594 lectin, mannose-binding 2-like isoform 2 [Homo sapiens]
gil 18079254 p53 and DNA damage-regulated protein [Homo sapiens] gil 18079254 p53 and DNA damage-regulated protein [Homo sapiens]
gil 13540614 coiled-coil domain containing 130 [Homo sapiens] gil 13540614 coiled-coil domain containing 130 [Homo sapiens]
gil88758580 cyclin L2 isoform A [Homo sapiens] gil88758580 cyclin L2 isoform A [Homo sapiens]
gil 13569962 RAB 1B, member RAS oncogene family [Homo sapiens] gil 13569962 RAB 1B, member RAS oncogene family [Homo sapiens]
gil 13654276 queuine tRNA-ribosyltransferase 1 [Homo sapiens] gill94306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens] gil 13654276 queuine tRNA-ribosyltransferase 1 [Homo sapiens] gill94306564 hypothetical protein LOC81926 isoform 2 [Homo sapiens]
gil54607108 zinc finger, MIZ-type containing 2 isoform 1 [Homo sapiens] gil54607108 zinc finger, MIZ-containing 2 isoform 1 [Homo sapiens]
gil32880229 selenoprotein O [Homo sapiens] gil32880229 selenoprotein O [Homo sapiens]
gill 17956405 yippee-like 3 [Homo sapiens] gill 17956405 yippee-like 3 [Homo sapiens]
gil20070354 histone deacetylase 10 [Homo sapiens] gil20070354 histone deacetylase 10 [Homo sapiens]
gill 87936946 hypothetical protein LOC84140 [Homo sapiens] gill 87936946 hypothetical protein LOC84140 [Homo sapiens]
gil47716512 mex-3 homolog B [Homo sapiens] gil47716512 mex-3 homolog B [Homo sapiens]
gill48596959 hypothetical protein LOC84293 [Homo sapiens] gill48596959 hypothetical protein LOC84293 [Homo sapiens]
gill4150141 programmed cell death 2-like [Homo sapiens] gill4150141 programmed cell death 2-like [Homo sapiens]
gil21362050 coiled-coil domain containing 115 [Homo sapiens] gil21362050 coiled-coil domain containing 115 [Homo sapiens]
gil32129199 cytokine induced protein 29 kDa [Homo sapiens] gil32129199 cytokine induced protein 29 kDa [Homo sapiens]
gill48806884 AKT1 Substrate 1 (proline-rich) [Homo sapiens] gill48806884 AKT1 substrates 1 (proline-rich) [Homo sapiens]
gil31543983 ADP-ribosylation factor GTPase activating protein 2 [Homo sapiens] gil31543983 ADP-ribosylation factor GTPase activating protein 2 [Homo sapiens]
gil24308326 BR serine/threonine kinase 1 [Homo sapiens] gil24308326 BR serine / threonine kinase 1 [Homo sapiens]
gill 19624572 tau tubulin kinase 1, isoform CRA_a [Homo sapiens] gill 19624572 tau tubulin kinase 1, isoform CRA_a [Homo sapiens]
gil 14249132 brain expressed X-linked 2 [Homo sapiens] gil 14249132 brain expressed X-linked 2 [Homo sapiens]
gil40548382 multidrug resistance-related protein [Homo sapiens] gil40548382 multidrug resistance-related protein [Homo sapiens]
gill0438605 unnamed protein product [Homo sapiens] gill0438605 unnamed protein product [Homo sapiens]
gil42734379 THAP domain containing, apoptosis associated protein 3 [Homo sapiens] gil42734379 THAP domain containing, apoptosis associated protein 3 [Homo sapiens]
RecName: Full=ATP-binding domain-containing protein 3; AltName: Full=Cancer-associated gil74713747  RecName: Full = ATP-binding domain-containing protein 3; AltName: Full = Cancer-associated gil74713747
gene protein  gene protein
gil89191850 Yipl interacting factor homolog B isoform 4 [Homo sapiens] gil89191850 Yipl interacting factor homolog B isoform 4 [Homo sapiens]
gill 11074524 Src homology 2 domain containing F [Homo sapiens] gill 11074524 Src homology 2 domain containing F [Homo sapiens]
gil55742736 zinc finger protein 700 [Homo sapiens] gil55742736 zinc finger protein 700 [Homo sapiens]
gil53729359 leucine rieh repeat and sterile alpha motif containing 1 [Homo sapiens] gil53729359 leucine rieh repeat and sterile alpha motif containing 1 [Homo sapiens]
gil27552770 splA/ryanodine receptor domain and SOCS box containing 3 [Homo sapiens] gil27552770 splA / ryanodine receptor domain and SOCS box containing 3 [Homo sapiens]
gil50086624 Integrator complex subunit 4 [Homo sapiens] gil50086624 Integrator complex subunit 4 [Homo sapiens]
gil32455236 helicase (DNA) B [Homo sapiens] gil32455236 helicase (DNA) B [Homo sapiens]
gil217416379 heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo sapiens] gil217416379 heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo sapiens]
gill6445029 Immunoglobulin superfamily, member 8 [Homo sapiens] gill6445029 Immunoglobulin superfamily, member 8 [Homo sapiens]
gil34878735 F-box protein 44 isoform 1 [Homo sapiens] gil34878735 F-box protein 44 isoform 1 [Homo sapiens]
gill9923935 coiled-coil domain containing 101 [Homo sapiens] gill9923935 coiled-coil domain containing 101 [Homo sapiens]
gill56564240 coiled-coil domain containing 104 [Homo sapiens] gill56564240 coiled-coil domain containing 104 [Homo sapiens]
gil209571507 HGFL protein isoform 2 [Homo sapiens] gil209571507 HGFL protein isoform 2 [Homo sapiens]
gill l2821681 G protein-regulated inducer of neurite outgrowth 1 [Homo sapiens] gill l2821681 G protein-regulated inducer of neurite outgrowth 1 [Homo sapiens]
gil22035616 oxysterol-binding protein-like protein 7 [Homo sapiens] gil22035616 oxysterol-binding protein-like protein 7 [Homo sapiens]
gill 15511030 hypothetical protein LOCI 15004 [Homo sapiens] gill 15511030 hypothetical protein LOCI 15004 [Homo sapiens]
gil30520320 ring finger protein 166 [Homo sapiens] gil30520320 ring finger protein 166 [Homo sapiens]
gill6945972 kelch domain containing 3 [Homo sapiens] gill6945972 kelch domain containing 3 [Homo sapiens]
gil28274701 zinc finger protein 511 [Homo sapiens] gil28274701 zinc finger protein 511 [Homo sapiens]
gil50557648 zinc finger, FYVE domain containing 27 isoform c [Homo sapiens] gil50557648 zinc finger, FYVE domain containing 27 isoform c [Homo sapiens]
gil21389389 SLAIN motif family, member 1 B [Homo sapiens] gill60420328 iron-sulfur Cluster assembly 2 [Homo sapiens] gil21389389 SLAIN motif family, member 1 B [Homo sapiens] gill60420328 iron-sulfur cluster assembly 2 [Homo sapiens]
gill24517699 ankyrin repeat domain 13B [Homo sapiens] gill24517699 ankyrin repeat domain 13B [Homo sapiens]
gil38788219 zinc finger protein 428 [Homo sapiens] gil38788219 zinc finger protein 428 [Homo sapiens]
gil20270343 ADP-ribosylation factor-like 8A [Homo sapiens] gil20270343 ADP-ribosylation factor-like 8A [Homo sapiens]
gil28827795 chromatin modifying protein 4B [Homo sapiens] gil28827795 chromatin modifying protein 4B [Homo sapiens]
gil50511941 EMI domain containing 1 [Homo sapiens] gil50511941 EMI domain containing 1 [Homo sapiens]
GL285026434 U8 snoRNA-decapping enzyme isoform 2 [Homo sapiens]  GL285026434 U8 snoRNA-decapping enzyme isoform 2 [Homo sapiens]
gil30520329 lysophosphatidic acid acyltransferase zeta [Homo sapiens] gil30520329 lysophosphatidic acid acyltransferase zeta [Homo sapiens]
gill33922582 zinc finger protein 358 [Homo sapiens] gill33922582 zinc finger protein 358 [Homo sapiens]
gill7933774 transcription elongation factor A (Sll)-like 2 [Homo sapiens] gill7933774 transcription elongation factor A (SLI) -like 2 [Homo sapiens]
gill8129632 sterile alpha motif domain containing 10 [Homo sapiens] gill8129632 sterile alpha motif domain containing 10 [Homo sapiens]
gill8152783 ribosomal protein L10-like protein [Homo sapiens] gill8152783 ribosomal protein L10-like protein [Homo sapiens]
gill90341093 fibroblast growth factor binding protein 3 [Homo sapiens] gill90341093 fibroblast growth factor binding protein 3 [Homo sapiens]
gil58761496 heterogeneous nuclear ribonucleoprotein Al-like [Homo sapiens] gil58761496 heterogeneous nuclear ribonucleoprotein Al-like [Homo sapiens]
gill 19597916 hCG1820887 [Homo sapiens] Gil 19597916 hCG1820887 [Homo sapiens]
gill22937289 kinesin family member 18B [Homo sapiens] gill22937289 kinesin family member 18B [Homo sapiens]
gil22748979 transmembrane protein 199 [Homo sapiens] gil22748979 transmembrane protein 199 [Homo sapiens]
gil46275820 tetratricopeptide repeat domain 9B [Homo sapiens] gil46275820 tetratricopeptide repeat domain 9B [Homo sapiens]
gill 19576613 hCG20425, isoform CRA_a [Homo sapiens] Gil 19576613 hCG20425, isoform CRA_a [Homo sapiens]
gil22749047 coiled-coil domain containing 24 [Homo sapiens] gil22749047 coiled-coil domain containing 24 [Homo sapiens]
gil40555765 RNF187 protein [Homo sapiens] gil40555765 RNF187 protein [Homo sapiens]
gil21389515 ring finger protein 145 [Homo sapiens] gil21389515 ring finger protein 145 [Homo sapiens]
gil63003894 hypothetical protein LOCI 54467 [Homo sapiens] gil63003894 hypothetical protein LOCI 54467 [Homo sapiens]
gill 10681708 zinc finger protein 579 [Homo sapiens] gill 10681708 zinc finger protein 579 [Homo sapiens]
gil22749235 zinc finger protein 709 [Homo sapiens] gil22749235 zinc finger protein 709 [Homo sapiens]
gil24475814 Polymerase (RNA) III (DNA directed) Polypeptide H (22.9kD) isoform a [Homo sapiens] gil21699088 zinc finger protein 627 [Homo sapiens] gil24475814 Polymerase (RNA) III (DNA directed) polypeptides H (22.9kD) isoform a [Homo sapiens] gil21699088 zinc finger protein 627 [Homo sapiens]
gil29788785 tubulin, beta [Homo sapiens] gil29788785 tubulin, beta [Homo sapiens]
gil67906195 ankyrin repeat and sterile alpha motif domain containing 6 [Homo sapiens] gil67906195 ankyrin repeat and sterile alpha motif domain containing 6 [Homo sapiens]
gil40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] gil40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
gil32698938 cornichon homolog 2 [Homo sapiens] gil32698938 cornichon homolog 2 [Homo sapiens]
gil25014109 selenoprotein H [Homo sapiens] gil25014109 selenoprotein H [Homo sapiens]
gill 19588217 hypothetical protein LOC283174 [Homo sapiens] gill 19588217 hypothetical protein LOC283174 [Homo sapiens]
gil32698950 hypothetical protein LOC283870 [Homo sapiens] gil32698950 hypothetical protein LOC283870 [Homo sapiens]
gill 19592278 hematopoietic signal peptide-containing, isoform CRA_b [Homo sapiens] gill 19592278 hematopoietic signal peptide-containing, isoform CRA_b [Homo sapiens]
gill94378374 unnamed protein product [Homo sapiens] gill94378374 unnamed protein product [Homo sapiens]
gil87196600 polyserase 3 [Homo sapiens] gil87196600 polyserase 3 [Homo sapiens]
gil56090146 jumonji domain containing 8 [Homo sapiens] gil56090146 jumonji domain containing 8 [Homo sapiens]
gil29788768 tubulin, beta 2B [Homo sapiens] gil29788768 tubulin, beta 2B [Homo sapiens]
gil30026034 solute carrier family 35, member B2 [Homo sapiens] gil30026034 solute carrier family 35, member B2 [Homo sapiens]
gill26722894 hypothetical protein LOC348262 [Homo sapiens] gill26722894 hypothetical protein LOC348262 [Homo sapiens]
gill87281616 NADH-ubiquinone oxidoreductase Fe-S protein 7 precursor [Homo sapiens] gill58256596 unnamed protein product [Homo sapiens] gill87281616 NADH-ubiquinone oxidoreductase Fe-S protein 7 precursor [Homo sapiens] gill58256596 unnamed protein product [Homo sapiens]
gill67466201 WAS protein family homolog 1 [Homo sapiens] gill67466201 WHAT protein family homolog 1 [Homo sapiens]
gil58219048 hairy and enhancer of split 5 [Homo sapiens] gil58219048 hairy and enhancer of split 5 [Homo sapiens]
gill57819143 hypothetical protein LOC402665 [Homo sapiens] gil39992616 PIM3 protein [Homo sapiens] gill57819143 hypothetical protein LOC402665 [Homo sapiens] gil39992616 PIM3 protein [Homo sapiens]
gill69161838 PREDICTED: similar to hCG2040565 [Homo sapiens] gil205830928 RecName: Full=TLC domain-containing protein 2 gill 19964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo sapiens] gill24249392 DNL-type zinc finger [Homo sapiens] gill69161838 PREDICTED: similar to hCG2040565 [Homo sapiens] gil205830928 RecName: Full = TLC domain-containing protein 2 gill 19964728 D-2-hydroxyglutarate dehydrogenase precursor [Homo sapiens] gill24249392 DNL-type zinc finger [Homo sapiens]

Claims

Patentansprüche claims
Verwendung der MarkerSequenzen zur Diagnose von Use of marker sequences for the diagnosis of
Systemischer Lupus erythematodes, wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon an oder von einem zu untersuchenden Patienten bestimmt wird, wobei die SEQ 1 - 716 und / oder SEQ la-716a mittels einem normalisierten Systemic lupus erythematosus, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 and / or SEQ. La-716a or a protein coding therefor or in each case a partial sequence or fragment thereof to or from a patient to be examined is determined, wherein the SEQ 1 - 716 and / or SEQ-716a by means of a normalized
Proteinbiochip identifiziert werden. Protein biochip can be identified.
Verwendung der MarkerSequenzen zur Diagnose von Use of marker sequences for the diagnosis of
Systemischer Lupus erythematodes nach Anspruch 1, dadurch gekennzeichnet, mindestens 2 bis 5 oder 10, vorzugsweise 30 bis 50 Markersequenzen oder 50 bis 100 oder mehr MarkerSequenzen an oder von einem zu Systemic lupus erythematosus according to claim 1, characterized in that it comprises at least 2 to 5 or 10, preferably 30 to 50, marker sequences or 50 to 100 or more marker sequences to or from one
untersuchenden Patienten bestimmt wird. determined by the examining patient.
Verwendung der MarkerSequenzen zur Diagnose von Use of marker sequences for the diagnosis of
Systemischer Lupus erythematodes nach Anspruch 1 oder 2, dadurch gekennzeichnet, dass die Bestimmung mittels in-vitro Diagnose erfolgt. Systemic lupus erythematosus according to claim 1 or 2, characterized in that the determination is carried out by means of in vitro diagnosis.
Verwendung einer Markersequenz einer cDNA jeweils ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon als Diagnostikum . Use of a marker sequence of a cDNA in each case selected from the group SEQ 1-716 and / or SEQ.alpha.-716a or in each case a protein coding therefor or in each case a partial sequence or fragment thereof as a diagnostic agent.
Verwendung der MarkerSequenzen zur Diagnose von Use of marker sequences for the diagnosis of
Systemischer Lupus erythematodes nach einem der Systemic lupus erythematosus after one of the
vorhergehenden Ansprüche, dadurch gekennzeichnet, dass die MarkerSequenzen auf einem festen Träger aufgebracht werden, insbesondere einen Filter, eine Membran, ein magnetisches oder Fluorophor-markiertes Kügelchen, ein Silizium-Wafer , Glas, Metall, Kunststoff, ein Chip, ein massenspektrometrisches Target oder eine Matrix. The preceding claims, characterized in that the marker sequences applied to a solid support In particular, a filter, a membrane, a magnetic or fluorophore-labeled bead, a silicon wafer, glass, metal, plastic, a chip, a mass spectrometric target or a matrix.
Verfahren zur Diagnose von Systemischer Lupus Method for Diagnosing Systemic Lupus
erythematodes, wobei erythematosus, wherein
a. ) mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon auf einem festen Träger aufgebracht wird und a. ) at least one marker sequence of a cDNA selected from the group SEQ 1-716 and / or SEQ-716a, or in each case a protein coding therefor or in each case a partial sequence or fragment thereof is applied to a solid support, and
b. ) mit Körperflüssigkeit oder Gewebeauszug eines b. ) with body fluid or tissue extract one
Patienten in Kontakt gebracht wird und Patient is brought in contact and
c. ) der Nachweis einer Wechselwirkung der c. ) the proof of an interaction of the
Körperflüssigkeit oder Gewebeauszug mit den Body fluid or tissue extract with the
MarkerSequenzen aus a.) erfolgt. Marker sequences from a.) Takes place.
Verfahren zur Diagnose von Systemischer Lupus Method for Diagnosing Systemic Lupus
erythematodes nach Anspruch 6, wobei in einem weiteren Schritt repräsentierte Markersequenzen, insbesondere Proteine, mit Autoantikörpern aus Nicht- Systemischer Lupus erythematodes Patienten normalisiert werden. Erythematosus according to claim 6, wherein in a further step represented marker sequences, in particular proteins, with autoantibodies from non-systemic lupus erythematosus patients are normalized.
Verfahren zum Stratifizieren, insbesondere zur Process for stratifying, in particular for
Risikostratifizierung, oder zur Therapiesteuerung eines Patienten mit Systemischer Lupus erythematodes, wobei mindestens eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon an einem zu untersuchenden Patienten bestimmt wird. Risk stratification, or for therapy control of a patient with systemic lupus erythematosus, wherein at least one marker sequence of a cDNA selected from the group SEQ 1-716 and / or SEQ-716a or each a protein coding therefor or in each case a partial sequence or fragment thereof to be examined Patient is determined.
9. Verfahren nach Anspruch 8, wobei das Stratifizieren oder die Therapiesteuerung Entscheidungen zur 9. The method of claim 8, wherein the stratifying or therapy control decisions for
Behandlung und Therapie des Patienten, insbesondere Hospitalisierung des Patienten, Einsatz, Wirkung und / oder Dosierung eines oder mehrerer Arzneimittel, eine therapeutische Maßnahme oder die Überwachung eines Krankheitsverlaufes sowie Therapieverlauf, Ätiologie oder Klassifizierung einer Erkrankung samt Prognose umfasst .  Treatment and therapy of the patient, in particular hospitalization of the patient, use, effect and / or dosage of one or more drugs, a therapeutic measure or the monitoring of a disease course and therapy course, etiology or classification of a disease including prognosis.
10. Anordnung von MarkerSequenzen enthaltend mindestens 10. Arrangement of marker sequences containing at least
eine Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein, wobei die SEQ 1 - 716 und / oder SEQ la-716a mittels einem normalisierten  a marker sequence of a cDNA selected from the group SEQ 1-716 and / or SEQ-716a or in each case a protein coding therefor, wherein the SEQ 1-716 and / or SEQ. 716a by means of a normalized
Proteinbiochip identifiziert werden.  Protein biochip can be identified.
11. Anordnung nach Anspruch 10, dadurch gekennzeichnet, dass mindestens 2 bis 5 oder 10, vorzugsweise 30 bis 50 MarkerSequenzen oder 50 bis 100 oder mehr 11. Arrangement according to claim 10, characterized in that at least 2 to 5 or 10, preferably 30 to 50 marker sequences or 50 to 100 or more
MarkerSequenzen enthalten sind.  Marker sequences are included.
12. Anordnung nach Anspruch 10, dadurch gekennzeichnet, dass die Markersequenzen als Clone vorliegen. 12. Arrangement according to claim 10, characterized in that the marker sequences are present as clones.
13. Assay, Proteinbiochip bestehend aus einer Anordnung 13. Assay, protein biochip consisting of an assembly
nach Anspruch 10, dadurch gekennzeichnet, dass die MarkerSequenzen auf einem festen Träger aufgebracht sind .  according to claim 10, characterized in that the marker sequences are applied to a solid support.
14. Verwendung einer Anordnung nach einem der Ansprüche 10 bis 12 oder einem Assay nach Anspruch 13 zum 14. Use of an arrangement according to one of claims 10 to 12 or an assay according to claim 13 for
Identifizieren und Charakterisieren einer Substanz für Systemischer Lupus erythematodes enthaltend Mittel zum Nachweis eines Bindungserfolges, dadurch Identifying and Characterizing a Systemic Lupus Erythematosus Substance Containing Proof of a binding success, thereby
gekennzeichnet, dass eine Anordnung oder Assay mit a.) mindestens einer zu untersuchenden Substanz in Kontakt gebracht wird und b.) ein Bindungserfolg nachgewiesen wird .  in that an arrangement or assay is brought into contact with a.) at least one substance to be investigated and b.) a binding success is detected.
15. Verwendung einer Anordnung nach einem der Ansprüche 10 bis 12 oder einem Assay nach Anspruch 13 zum Screenen von Wirkstoffen für Systemischer Lupus erythematodes. 15. Use of an arrangement according to one of claims 10 to 12 or an assay according to claim 13 for the screening of agents for systemic lupus erythematosus.
16. Diagnostika zur Diagnose von Systemischer Lupus 16. Diagnostics for Diagnosing Systemic Lupus
erythematodes, jeweils ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon.  erythematosus, each selected from the group SEQ 1-716 and / or SEQ-716a or in each case a protein coding therefor or in each case a partial sequence or fragment thereof.
17. Target zur Behandlung und Therapie von Systemischer Lupus erythematodes, jeweils ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer 17. Target for the treatment and therapy of systemic lupus erythematosus, each selected from the group SEQ 1-716 and / or SEQ.alpha.-716a or in each case a protein coding therefor or in each case one
Teilsequenz oder Fragment davon.  Partial sequence or fragment thereof.
18. Verwendung einer Markersequenz einer cDNA ausgewählt aus der Gruppe SEQ 1 - 716 und / oder SEQ la-716a oder jeweils ein dafür kodierendes Protein oder jeweils einer Teilsequenz oder Fragment davon als 18. Use of a marker sequence of a cDNA selected from the group SEQ 1-716 and / or SEQ-716a or in each case a protein coding therefor or in each case a partial sequence or fragment thereof as
Affinitätsmaterial zur Durchführung einer Apherese oder Blutwäsche für Patienten mit Systemischer Lupus erythematodes .  Affinity material for performing apheresis or blood lavage on patients with systemic lupus erythematosus.
EP11782567.9A 2010-10-12 2011-10-12 Marker sequences for systemic lupus erythematosus and the use thereof Withdrawn EP2627782A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
EP11782567.9A EP2627782A2 (en) 2010-10-12 2011-10-12 Marker sequences for systemic lupus erythematosus and the use thereof

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
EP10187316A EP2441848A1 (en) 2010-10-12 2010-10-12 Marker sequences for systematic lupus erythematodes and use of same
EP11782567.9A EP2627782A2 (en) 2010-10-12 2011-10-12 Marker sequences for systemic lupus erythematosus and the use thereof
PCT/EP2011/067842 WO2012049225A2 (en) 2010-10-12 2011-10-12 Marker sequences for systemic lupus erythematosus and the use thereof

Publications (1)

Publication Number Publication Date
EP2627782A2 true EP2627782A2 (en) 2013-08-21

Family

ID=43533355

Family Applications (2)

Application Number Title Priority Date Filing Date
EP10187316A Withdrawn EP2441848A1 (en) 2010-10-12 2010-10-12 Marker sequences for systematic lupus erythematodes and use of same
EP11782567.9A Withdrawn EP2627782A2 (en) 2010-10-12 2011-10-12 Marker sequences for systemic lupus erythematosus and the use thereof

Family Applications Before (1)

Application Number Title Priority Date Filing Date
EP10187316A Withdrawn EP2441848A1 (en) 2010-10-12 2010-10-12 Marker sequences for systematic lupus erythematodes and use of same

Country Status (3)

Country Link
US (1) US20130303395A1 (en)
EP (2) EP2441848A1 (en)
WO (1) WO2012049225A2 (en)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2608315C (en) * 2005-05-13 2014-08-05 Centre National De La Recherche Scientifique Use of a new gene coding for a new member of the mcm2-8 family in pharmaceutical compositions
AR086673A1 (en) * 2011-06-06 2014-01-15 Baylor Res Inst IMPROVED ANSWERS BY LES-DC OF B-CELLS THAT SECRET IgG AND IgA
US10060911B2 (en) 2011-08-19 2018-08-28 Protagen Aktiengesellschaft Method for diagnosis of high-affinity binders and marker sequences
WO2015118184A1 (en) 2014-02-10 2015-08-13 Protagen Ag Marker sequences for diagnosing and stratifying sle patients
WO2017168014A1 (en) * 2016-04-02 2017-10-05 Protagen Ag Marker sequences for rheumatoid arthritis
US12203933B2 (en) 2018-08-15 2025-01-21 Mayo Foundation For Medical Education And Research Methods and materials for identifying and treating membranous nephropathy
CN110873797B (en) * 2019-12-09 2021-07-30 四川大学华西医院 Use of FKBP8 autoantibody detection reagent in the preparation of lung cancer screening kit

Family Cites Families (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DE1073771T1 (en) 1998-04-30 2002-06-13 Max-Planck-Gesellschaft Zur Foerderung Der Wissenschaften E.V. NEW METHOD FOR SELECTION OF CLONES OF AN EXPRESSION LIBRARY BY MEANS OF "REARRAYING"
AU770540B2 (en) 1998-04-30 2004-02-26 Max-Planck-Gesellschaft Zur Forderung Der Wissenschaften E.V. Novel method for the identification of clones conferring a desired biological property from an expression library
US6537968B1 (en) * 2000-07-24 2003-03-25 Alphamed Pharmaceuticals Corp Treatment of lupus erythematosus
US20030148298A1 (en) * 2001-04-03 2003-08-07 O''toole Margot Methods for diagnosing and treating systemic lupus erythematosus disease and compositions thereof
US6905827B2 (en) * 2001-06-08 2005-06-14 Expression Diagnostics, Inc. Methods and compositions for diagnosing or monitoring auto immune and chronic inflammatory diseases
AU2002367732A1 (en) * 2001-10-31 2003-09-09 Children's Hospital Medical Center Method for diagnosis and treatment of rheumatoid arthritis
CA2485968A1 (en) * 2002-05-16 2004-06-03 Vanderbilt University Method for predicting autoimmune diseases
DE102007062847A1 (en) * 2007-12-21 2009-12-31 Protagen Ag Marker sequences for neurodegenerative diseases and their use
WO2012031122A2 (en) * 2010-09-03 2012-03-08 Immport Therapeutics, Inc. Methods and compositions for the diagnosis and treatment of cancer and autoimmune disorders

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
None *
See also references of WO2012049225A2 *

Also Published As

Publication number Publication date
WO2012049225A2 (en) 2012-04-19
EP2441848A1 (en) 2012-04-18
WO2012049225A3 (en) 2012-06-21
US20130303395A1 (en) 2013-11-14

Similar Documents

Publication Publication Date Title
US9746482B2 (en) Diagnostic biomarker profiles for the detection and diagnosis of parkinsons disease
EP2627782A2 (en) Marker sequences for systemic lupus erythematosus and the use thereof
EP2483690A1 (en) Marker sequences for pancreatic cancer diseases, pancreatic carcinoma and use thereof
EP2795332A2 (en) Marker sequences for breast cancer and the use thereof
EP2791681A2 (en) Method for identifying marker sequences for gynaecological malignant tumours
US20130217591A1 (en) Marker Sequences for Inflammatory Prostate Diseases, Prostate Carconoma and Their Use
WO2013170994A1 (en) Marker sequences for rheumatoid arthritis
EP2622350A2 (en) Marker sequences for multiple sclerosis and use thereof
EP2255195A2 (en) Marker sequences for rheumatoid arthritis and use thereof
DE102007062847A1 (en) Marker sequences for neurodegenerative diseases and their use
EP2627783A2 (en) Marker sequences for multiple sclerosis and the use thereof
EP3147663A2 (en) Marker sequences for multiple sclerosis and use of the same
EP2780471A2 (en) Novel method for identifying specific marker sequences for prostate cancer
EP2487251A1 (en) Marker sequences for the diagnosis of prostate carcinoma and use of same
EP2644704A1 (en) Marker sequences for rheumatoid arthritis
EP2275568A1 (en) Marker sequences for obesity and use of same
HK1143995A (en) Marker sequences for multiple sclerosis and use thereof

Legal Events

Date Code Title Description
PUAI Public reference made under article 153(3) epc to a published international application that has entered the european phase

Free format text: ORIGINAL CODE: 0009012

17P Request for examination filed

Effective date: 20130513

AK Designated contracting states

Kind code of ref document: A2

Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR

RIN1 Information on inventor provided before grant (corrected)

Inventor name: KOWALD, AXEL

Inventor name: SCHEER, CHRISTIAN

Inventor name: SCHNEIDER, MATTHIAS

Inventor name: MUELLNER, STEFAN

Inventor name: LUEKING, ANGELIKA

DAX Request for extension of the european patent (deleted)
17Q First examination report despatched

Effective date: 20171109

PUAG Search results despatched under rule 164(2) epc together with communication from examining division

Free format text: ORIGINAL CODE: 0009017

17Q First examination report despatched

Effective date: 20190503

B565 Issuance of search results under rule 164(2) epc

Effective date: 20190503

RIC1 Information provided on ipc code assigned before grant

Ipc: C12Q 1/68 20180101AFI20190429BHEP

RAP1 Party data changed (applicant data changed or rights of an application transferred)

Owner name: PROTAGEN GMBH

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN

18D Application deemed to be withdrawn

Effective date: 20191114

RAP1 Party data changed (applicant data changed or rights of an application transferred)

Owner name: ONCIMMUNE GERMANY GMBH