EP1969131A1 - Process for the preparation of delta lactones - Google Patents
Process for the preparation of delta lactonesInfo
- Publication number
- EP1969131A1 EP1969131A1 EP06829671A EP06829671A EP1969131A1 EP 1969131 A1 EP1969131 A1 EP 1969131A1 EP 06829671 A EP06829671 A EP 06829671A EP 06829671 A EP06829671 A EP 06829671A EP 1969131 A1 EP1969131 A1 EP 1969131A1
- Authority
- EP
- European Patent Office
- Prior art keywords
- formula
- enantiomerically enriched
- enriched compound
- dera
- seq
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
- 238000000034 method Methods 0.000 title claims abstract description 45
- 230000008569 process Effects 0.000 title claims abstract description 39
- 125000000422 delta-lactone group Chemical group 0.000 title claims abstract description 19
- 238000002360 preparation method Methods 0.000 title abstract description 9
- 101000928995 Caenorhabditis elegans Putative deoxyribose-phosphate aldolase Proteins 0.000 claims abstract description 70
- 102100037802 Deoxyribose-phosphate aldolase Human genes 0.000 claims abstract description 70
- IKHGUXGNUITLKF-UHFFFAOYSA-N Acetaldehyde Chemical compound CC=O IKHGUXGNUITLKF-UHFFFAOYSA-N 0.000 claims abstract description 54
- 102000001390 Fructose-Bisphosphate Aldolase Human genes 0.000 claims abstract description 45
- 108010068561 Fructose-Bisphosphate Aldolase Proteins 0.000 claims abstract description 45
- 241000588724 Escherichia coli Species 0.000 claims abstract description 5
- 241000626621 Geobacillus Species 0.000 claims abstract description 4
- 244000063299 Bacillus subtilis Species 0.000 claims abstract description 3
- 235000014469 Bacillus subtilis Nutrition 0.000 claims abstract description 3
- 150000001875 compounds Chemical class 0.000 claims description 90
- 125000004432 carbon atom Chemical group C* 0.000 claims description 30
- 125000000217 alkyl group Chemical group 0.000 claims description 27
- 239000003054 catalyst Substances 0.000 claims description 26
- 125000003342 alkenyl group Chemical group 0.000 claims description 21
- 238000005984 hydrogenation reaction Methods 0.000 claims description 19
- 125000000304 alkynyl group Chemical group 0.000 claims description 16
- 239000007800 oxidant agent Substances 0.000 claims description 14
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 13
- 125000003118 aryl group Chemical group 0.000 claims description 11
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 10
- 239000003795 chemical substances by application Substances 0.000 claims description 8
- 239000000839 emulsion Substances 0.000 claims description 7
- 235000013305 food Nutrition 0.000 claims description 6
- 230000001590 oxidative effect Effects 0.000 claims description 6
- 239000002537 cosmetic Substances 0.000 claims description 3
- 239000000796 flavoring agent Substances 0.000 abstract description 9
- 235000019634 flavors Nutrition 0.000 abstract description 8
- 239000000543 intermediate Substances 0.000 abstract description 5
- 239000003205 fragrance Substances 0.000 abstract description 4
- 238000004519 manufacturing process Methods 0.000 abstract description 4
- 239000003814 drug Substances 0.000 abstract description 2
- -1 n-octyl Chemical group 0.000 description 70
- 238000006243 chemical reaction Methods 0.000 description 43
- 238000006297 dehydration reaction Methods 0.000 description 37
- 230000018044 dehydration Effects 0.000 description 36
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 30
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 26
- 210000004027 cell Anatomy 0.000 description 26
- 241001646716 Escherichia coli K-12 Species 0.000 description 24
- 230000000694 effects Effects 0.000 description 24
- 102000004190 Enzymes Human genes 0.000 description 22
- 108090000790 Enzymes Proteins 0.000 description 22
- 150000001299 aldehydes Chemical class 0.000 description 18
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 17
- 125000003275 alpha amino acid group Chemical group 0.000 description 16
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 15
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 15
- 239000000284 extract Substances 0.000 description 15
- 150000001413 amino acids Chemical class 0.000 description 14
- 210000004899 c-terminal region Anatomy 0.000 description 13
- 239000011541 reaction mixture Substances 0.000 description 13
- 239000000243 solution Substances 0.000 description 13
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 12
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 12
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 12
- 239000000872 buffer Substances 0.000 description 12
- 229910052739 hydrogen Inorganic materials 0.000 description 12
- UIIMBOGNXHQVGW-UHFFFAOYSA-M sodium bicarbonate Substances [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 12
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 11
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 11
- 235000019439 ethyl acetate Nutrition 0.000 description 10
- 239000002904 solvent Substances 0.000 description 10
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 9
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 9
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 9
- 230000015572 biosynthetic process Effects 0.000 description 9
- 239000000203 mixture Substances 0.000 description 9
- 238000007254 oxidation reaction Methods 0.000 description 9
- 239000000047 product Substances 0.000 description 9
- PBTYTLMBTXXZJF-UHFFFAOYSA-N 2-ethyl-2,3-dihydropyran-6-one Chemical compound CCC1CC=CC(=O)O1 PBTYTLMBTXXZJF-UHFFFAOYSA-N 0.000 description 8
- JFVQYQDTHWLYHG-UHFFFAOYSA-N 6-ethyloxan-2-one Chemical compound CCC1CCCC(=O)O1 JFVQYQDTHWLYHG-UHFFFAOYSA-N 0.000 description 8
- IMNFDUFMRHMDMM-UHFFFAOYSA-N N-Heptane Chemical compound CCCCCCC IMNFDUFMRHMDMM-UHFFFAOYSA-N 0.000 description 8
- 238000003556 assay Methods 0.000 description 8
- 230000003647 oxidation Effects 0.000 description 8
- 108090000623 proteins and genes Proteins 0.000 description 8
- 239000000758 substrate Substances 0.000 description 8
- 238000003786 synthesis reaction Methods 0.000 description 8
- ZTQSAGDEMFDKMZ-UHFFFAOYSA-N Butyraldehyde Chemical compound CCCC=O ZTQSAGDEMFDKMZ-UHFFFAOYSA-N 0.000 description 7
- GSEJCLTVZPLZKY-UHFFFAOYSA-N Triethanolamine Chemical compound OCCN(CCO)CCO GSEJCLTVZPLZKY-UHFFFAOYSA-N 0.000 description 7
- 230000035772 mutation Effects 0.000 description 7
- 229930027945 nicotinamide-adenine dinucleotide Natural products 0.000 description 7
- KDLHZDBZIXYQEI-UHFFFAOYSA-N palladium Substances [Pd] KDLHZDBZIXYQEI-UHFFFAOYSA-N 0.000 description 7
- 239000012071 phase Substances 0.000 description 7
- 238000004809 thin layer chromatography Methods 0.000 description 7
- WFDIJRYMOXRFFG-UHFFFAOYSA-N Acetic anhydride Chemical compound CC(=O)OC(C)=O WFDIJRYMOXRFFG-UHFFFAOYSA-N 0.000 description 6
- KKZFLSZAWCYPOC-VPENINKCSA-N Deoxyribose 5-phosphate Chemical compound O[C@H]1C[C@H](O)[C@@H](COP(O)(O)=O)O1 KKZFLSZAWCYPOC-VPENINKCSA-N 0.000 description 6
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 6
- CDBYLPFSWZWCQE-UHFFFAOYSA-L Sodium Carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 description 6
- 239000002253 acid Substances 0.000 description 6
- 125000000539 amino acid group Chemical group 0.000 description 6
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Chemical compound BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 description 6
- 229910052794 bromium Inorganic materials 0.000 description 6
- 101150013644 deoC gene Proteins 0.000 description 6
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 6
- 229910052731 fluorine Inorganic materials 0.000 description 6
- DCAYPVUWAIABOU-UHFFFAOYSA-N hexadecane Chemical compound CCCCCCCCCCCCCCCC DCAYPVUWAIABOU-UHFFFAOYSA-N 0.000 description 6
- BOPGDPNILDQYTO-NNYOXOHSSA-N nicotinamide-adenine dinucleotide Chemical compound C1=CCC(C(=O)N)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OC[C@@H]2[C@H]([C@@H](O)[C@@H](O2)N2C3=NC=NC(N)=C3N=C2)O)O1 BOPGDPNILDQYTO-NNYOXOHSSA-N 0.000 description 6
- XHXFXVLFKHQFAL-UHFFFAOYSA-N phosphoryl trichloride Chemical compound ClP(Cl)(Cl)=O XHXFXVLFKHQFAL-UHFFFAOYSA-N 0.000 description 6
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 6
- 125000001424 substituent group Chemical group 0.000 description 6
- 239000004094 surface-active agent Substances 0.000 description 6
- BZLVMXJERCGZMT-UHFFFAOYSA-N Methyl tert-butyl ether Chemical compound COC(C)(C)C BZLVMXJERCGZMT-UHFFFAOYSA-N 0.000 description 5
- 229910052736 halogen Inorganic materials 0.000 description 5
- 150000002367 halogens Chemical class 0.000 description 5
- 229910052740 iodine Inorganic materials 0.000 description 5
- NEDIAPMWNCQWNW-UHFFFAOYSA-N massoia lactone Natural products CCCCCC1CC=CC(=O)O1 NEDIAPMWNCQWNW-UHFFFAOYSA-N 0.000 description 5
- 239000012286 potassium permanganate Substances 0.000 description 5
- 229910002027 silica gel Inorganic materials 0.000 description 5
- 239000000741 silica gel Substances 0.000 description 5
- 229960001866 silicon dioxide Drugs 0.000 description 5
- 235000017557 sodium bicarbonate Nutrition 0.000 description 5
- DYNKRGCMLGUEMN-UHFFFAOYSA-N 2-methyl-2,3-dihydropyran-6-one Chemical compound CC1CC=CC(=O)O1 DYNKRGCMLGUEMN-UHFFFAOYSA-N 0.000 description 4
- HNJJNCRGYGIAGT-UHFFFAOYSA-N 6-ethyl-4-hydroxyoxan-2-one Chemical compound CCC1CC(O)CC(=O)O1 HNJJNCRGYGIAGT-UHFFFAOYSA-N 0.000 description 4
- QGZKDVFQNNGYKY-UHFFFAOYSA-N Ammonia Chemical compound N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 4
- HEDRZPFGACZZDS-UHFFFAOYSA-N Chloroform Chemical compound ClC(Cl)Cl HEDRZPFGACZZDS-UHFFFAOYSA-N 0.000 description 4
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 4
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 4
- SECXISVLQFMRJM-UHFFFAOYSA-N N-Methylpyrrolidone Chemical compound CN1CCCC1=O SECXISVLQFMRJM-UHFFFAOYSA-N 0.000 description 4
- 238000005481 NMR spectroscopy Methods 0.000 description 4
- NBBJYMSMWIIQGU-UHFFFAOYSA-N Propionic aldehyde Chemical compound CCC=O NBBJYMSMWIIQGU-UHFFFAOYSA-N 0.000 description 4
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 4
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 4
- 125000003545 alkoxy group Chemical group 0.000 description 4
- 239000007864 aqueous solution Substances 0.000 description 4
- 239000011942 biocatalyst Substances 0.000 description 4
- 239000006227 byproduct Substances 0.000 description 4
- 229910052801 chlorine Inorganic materials 0.000 description 4
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 4
- 238000012217 deletion Methods 0.000 description 4
- 230000037430 deletion Effects 0.000 description 4
- 238000001704 evaporation Methods 0.000 description 4
- 230000008020 evaporation Effects 0.000 description 4
- PXHVJJICTQNCMI-UHFFFAOYSA-N nickel Substances [Ni] PXHVJJICTQNCMI-UHFFFAOYSA-N 0.000 description 4
- 150000007523 nucleic acids Chemical class 0.000 description 4
- NUJGJRNETVAIRJ-UHFFFAOYSA-N octanal Chemical compound CCCCCCCC=O NUJGJRNETVAIRJ-UHFFFAOYSA-N 0.000 description 4
- 150000003839 salts Chemical class 0.000 description 4
- FYSNRJHAOHDILO-UHFFFAOYSA-N thionyl chloride Chemical compound ClS(Cl)=O FYSNRJHAOHDILO-UHFFFAOYSA-N 0.000 description 4
- JOXIMZWYDAKGHI-UHFFFAOYSA-N toluene-4-sulfonic acid Chemical compound CC1=CC=C(S(O)(=O)=O)C=C1 JOXIMZWYDAKGHI-UHFFFAOYSA-N 0.000 description 4
- 238000001644 13C nuclear magnetic resonance spectroscopy Methods 0.000 description 3
- TWSUWPLPZNCARG-UHFFFAOYSA-N 4-hydroxy-6-propyloxan-2-one Chemical compound CCCC1CC(O)CC(=O)O1 TWSUWPLPZNCARG-UHFFFAOYSA-N 0.000 description 3
- UHOVQNZJYSORNB-UHFFFAOYSA-N Benzene Chemical compound C1=CC=CC=C1 UHOVQNZJYSORNB-UHFFFAOYSA-N 0.000 description 3
- RZTOWFMDBDPERY-UHFFFAOYSA-N Delta-Hexanolactone Chemical compound CC1CCCC(=O)O1 RZTOWFMDBDPERY-UHFFFAOYSA-N 0.000 description 3
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 3
- MUBZPKHOEPUJKR-UHFFFAOYSA-N Oxalic acid Chemical compound OC(=O)C(O)=O MUBZPKHOEPUJKR-UHFFFAOYSA-N 0.000 description 3
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 3
- 235000014680 Saccharomyces cerevisiae Nutrition 0.000 description 3
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 3
- 150000001298 alcohols Chemical class 0.000 description 3
- JARKCYVAAOWBJS-UHFFFAOYSA-N caproic aldehyde Natural products CCCCCC=O JARKCYVAAOWBJS-UHFFFAOYSA-N 0.000 description 3
- FPPNZSSZRUTDAP-UWFZAAFLSA-N carbenicillin Chemical compound N([C@H]1[C@H]2SC([C@@H](N2C1=O)C(O)=O)(C)C)C(=O)C(C(O)=O)C1=CC=CC=C1 FPPNZSSZRUTDAP-UWFZAAFLSA-N 0.000 description 3
- 229960003669 carbenicillin Drugs 0.000 description 3
- 238000005119 centrifugation Methods 0.000 description 3
- 239000006184 cosolvent Substances 0.000 description 3
- 229960001760 dimethyl sulfoxide Drugs 0.000 description 3
- 230000007613 environmental effect Effects 0.000 description 3
- 238000000855 fermentation Methods 0.000 description 3
- 230000004151 fermentation Effects 0.000 description 3
- 239000012634 fragment Substances 0.000 description 3
- 238000010438 heat treatment Methods 0.000 description 3
- 239000001257 hydrogen Substances 0.000 description 3
- 229910052751 metal Inorganic materials 0.000 description 3
- 239000002184 metal Substances 0.000 description 3
- 150000002739 metals Chemical class 0.000 description 3
- 238000002156 mixing Methods 0.000 description 3
- 229910052759 nickel Inorganic materials 0.000 description 3
- 239000012074 organic phase Substances 0.000 description 3
- 150000002978 peroxides Chemical class 0.000 description 3
- 229920006395 saturated elastomer Polymers 0.000 description 3
- AWUCVROLDVIAJX-GSVOUGTGSA-N sn-glycerol 3-phosphate Chemical compound OC[C@@H](O)COP(O)(O)=O AWUCVROLDVIAJX-GSVOUGTGSA-N 0.000 description 3
- 229910000029 sodium carbonate Inorganic materials 0.000 description 3
- 239000007858 starting material Substances 0.000 description 3
- 239000011550 stock solution Substances 0.000 description 3
- 238000006467 substitution reaction Methods 0.000 description 3
- 229910052717 sulfur Inorganic materials 0.000 description 3
- 229910052720 vanadium Inorganic materials 0.000 description 3
- KKZQBMBBMJKIRQ-UHFFFAOYSA-N (4S,6S)-3,4,5,6-Tetrahydro-4-hydroxy-6-methyl-2H-pyran-2-one Chemical compound CC1CC(O)CC(=O)O1 KKZQBMBBMJKIRQ-UHFFFAOYSA-N 0.000 description 2
- LXJXRIRHZLFYRP-VKHMYHEASA-L (R)-2-Hydroxy-3-(phosphonooxy)-propanal Natural products O=C[C@H](O)COP([O-])([O-])=O LXJXRIRHZLFYRP-VKHMYHEASA-L 0.000 description 2
- LGZDNJBUAAXEMN-UHFFFAOYSA-N 1,2,2,3-tetramethyl-1-oxidopiperidin-1-ium Chemical compound CC1CCC[N+](C)([O-])C1(C)C LGZDNJBUAAXEMN-UHFFFAOYSA-N 0.000 description 2
- WSLDOOZREJYCGB-UHFFFAOYSA-N 1,2-Dichloroethane Chemical compound ClCCCl WSLDOOZREJYCGB-UHFFFAOYSA-N 0.000 description 2
- HANWHVWXFQSQGJ-UHFFFAOYSA-N 1-tetradecoxytetradecane Chemical compound CCCCCCCCCCCCCCOCCCCCCCCCCCCCC HANWHVWXFQSQGJ-UHFFFAOYSA-N 0.000 description 2
- 238000005160 1H NMR spectroscopy Methods 0.000 description 2
- HSJKGGMUJITCBW-UHFFFAOYSA-N 3-hydroxybutanal Chemical compound CC(O)CC=O HSJKGGMUJITCBW-UHFFFAOYSA-N 0.000 description 2
- YYROPELSRYBVMQ-UHFFFAOYSA-N 4-toluenesulfonyl chloride Chemical compound CC1=CC=C(S(Cl)(=O)=O)C=C1 YYROPELSRYBVMQ-UHFFFAOYSA-N 0.000 description 2
- DHRKBWCKEDPEPA-UHFFFAOYSA-N 6-propyloxane-2,4-diol Chemical compound CCCC1CC(O)CC(O)O1 DHRKBWCKEDPEPA-UHFFFAOYSA-N 0.000 description 2
- 102000003677 Aldehyde-Lyases Human genes 0.000 description 2
- 108090000072 Aldehyde-Lyases Proteins 0.000 description 2
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical compound [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 description 2
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 2
- LZZYPRNAOMGNLH-UHFFFAOYSA-M Cetrimonium bromide Chemical compound [Br-].CCCCCCCCCCCCCCCC[N+](C)(C)C LZZYPRNAOMGNLH-UHFFFAOYSA-M 0.000 description 2
- 108091026890 Coding region Proteins 0.000 description 2
- LXJXRIRHZLFYRP-VKHMYHEASA-N D-glyceraldehyde 3-phosphate Chemical compound O=C[C@H](O)COP(O)(O)=O LXJXRIRHZLFYRP-VKHMYHEASA-N 0.000 description 2
- 101710088194 Dehydrogenase Proteins 0.000 description 2
- MYMOFIZGZYHOMD-UHFFFAOYSA-N Dioxygen Chemical compound O=O MYMOFIZGZYHOMD-UHFFFAOYSA-N 0.000 description 2
- QUSNBJAOOMFDIB-UHFFFAOYSA-N Ethylamine Chemical compound CCN QUSNBJAOOMFDIB-UHFFFAOYSA-N 0.000 description 2
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 2
- MHAJPDPJQMAIIY-UHFFFAOYSA-N Hydrogen peroxide Chemical compound OO MHAJPDPJQMAIIY-UHFFFAOYSA-N 0.000 description 2
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical compound C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 2
- AMIMRNSIRUDHCM-UHFFFAOYSA-N Isopropylaldehyde Chemical compound CC(C)C=O AMIMRNSIRUDHCM-UHFFFAOYSA-N 0.000 description 2
- 239000002841 Lewis acid Substances 0.000 description 2
- 239000012359 Methanesulfonyl chloride Substances 0.000 description 2
- 108091028043 Nucleic acid sequence Proteins 0.000 description 2
- KFSLWBXXFJQRDL-UHFFFAOYSA-N Peracetic acid Chemical compound CC(=O)OO KFSLWBXXFJQRDL-UHFFFAOYSA-N 0.000 description 2
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 2
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 2
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 2
- 102000005924 Triose-Phosphate Isomerase Human genes 0.000 description 2
- 108700015934 Triose-phosphate isomerases Proteins 0.000 description 2
- 150000007513 acids Chemical class 0.000 description 2
- 239000000654 additive Substances 0.000 description 2
- 150000001335 aliphatic alkanes Chemical class 0.000 description 2
- 229910052783 alkali metal Inorganic materials 0.000 description 2
- 150000001340 alkali metals Chemical class 0.000 description 2
- 150000001412 amines Chemical class 0.000 description 2
- 229910021529 ammonia Inorganic materials 0.000 description 2
- 238000004458 analytical method Methods 0.000 description 2
- 239000008346 aqueous phase Substances 0.000 description 2
- 239000012298 atmosphere Substances 0.000 description 2
- AYJRCSIUFZENHW-UHFFFAOYSA-L barium carbonate Chemical compound [Ba+2].[O-]C([O-])=O AYJRCSIUFZENHW-UHFFFAOYSA-L 0.000 description 2
- 239000007844 bleaching agent Substances 0.000 description 2
- 238000004364 calculation method Methods 0.000 description 2
- 229940041514 candida albicans extract Drugs 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- 238000004440 column chromatography Methods 0.000 description 2
- GNGACRATGGDKBX-UHFFFAOYSA-N dihydroxyacetone phosphate Chemical compound OCC(=O)COP(O)(O)=O GNGACRATGGDKBX-UHFFFAOYSA-N 0.000 description 2
- 239000004174 erythrosine Substances 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 238000001914 filtration Methods 0.000 description 2
- 235000019264 food flavour enhancer Nutrition 0.000 description 2
- 238000002290 gas chromatography-mass spectrometry Methods 0.000 description 2
- 150000004678 hydrides Chemical class 0.000 description 2
- 230000002209 hydrophobic effect Effects 0.000 description 2
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 2
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 2
- 150000002576 ketones Chemical class 0.000 description 2
- QARBMVPHQWIHKH-UHFFFAOYSA-N methanesulfonyl chloride Chemical compound CS(Cl)(=O)=O QARBMVPHQWIHKH-UHFFFAOYSA-N 0.000 description 2
- BDAGIHXWWSANSR-UHFFFAOYSA-N methanoic acid Natural products OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 2
- 239000004530 micro-emulsion Substances 0.000 description 2
- 125000003136 n-heptyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 2
- 125000001280 n-hexyl group Chemical group C(CCCCC)* 0.000 description 2
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 2
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- KJIFKLIQANRMOU-UHFFFAOYSA-N oxidanium;4-methylbenzenesulfonate Chemical compound O.CC1=CC=C(S(O)(=O)=O)C=C1 KJIFKLIQANRMOU-UHFFFAOYSA-N 0.000 description 1
- 229910052763 palladium Inorganic materials 0.000 description 1
- 239000008188 pellet Substances 0.000 description 1
- VLTRZXGMWDSKGL-UHFFFAOYSA-N perchloric acid Chemical class OCl(=O)(=O)=O VLTRZXGMWDSKGL-UHFFFAOYSA-N 0.000 description 1
- KHIWWQKSHDUIBK-UHFFFAOYSA-N periodic acid Chemical class OI(=O)(=O)=O KHIWWQKSHDUIBK-UHFFFAOYSA-N 0.000 description 1
- 125000005385 peroxodisulfate group Chemical group 0.000 description 1
- 239000003444 phase transfer catalyst Substances 0.000 description 1
- 229940100595 phenylacetaldehyde Drugs 0.000 description 1
- PARWUHTVGZSQPD-UHFFFAOYSA-N phenylsilane Chemical compound [SiH3]C1=CC=CC=C1 PARWUHTVGZSQPD-UHFFFAOYSA-N 0.000 description 1
- 239000008363 phosphate buffer Substances 0.000 description 1
- 150000004714 phosphonium salts Chemical class 0.000 description 1
- 229910052698 phosphorus Inorganic materials 0.000 description 1
- 239000013612 plasmid Substances 0.000 description 1
- 229910052697 platinum Inorganic materials 0.000 description 1
- 229920001843 polymethylhydrosiloxane Polymers 0.000 description 1
- CHKVPAROMQMJNQ-UHFFFAOYSA-M potassium bisulfate Chemical compound [K+].OS([O-])(=O)=O CHKVPAROMQMJNQ-UHFFFAOYSA-M 0.000 description 1
- 229910000343 potassium bisulfate Inorganic materials 0.000 description 1
- KMUONIBRACKNSN-UHFFFAOYSA-N potassium dichromate Chemical compound [K+].[K+].[O-][Cr](=O)(=O)O[Cr]([O-])(=O)=O KMUONIBRACKNSN-UHFFFAOYSA-N 0.000 description 1
- GNSKLFRGEWLPPA-UHFFFAOYSA-M potassium dihydrogen phosphate Chemical compound [K+].OP(O)([O-])=O GNSKLFRGEWLPPA-UHFFFAOYSA-M 0.000 description 1
- TYJJADVDDVDEDZ-UHFFFAOYSA-M potassium hydrogencarbonate Chemical compound [K+].OC([O-])=O TYJJADVDDVDEDZ-UHFFFAOYSA-M 0.000 description 1
- 229910000160 potassium phosphate Inorganic materials 0.000 description 1
- 235000011009 potassium phosphates Nutrition 0.000 description 1
- 238000001556 precipitation Methods 0.000 description 1
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 238000002708 random mutagenesis Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 238000005215 recombination Methods 0.000 description 1
- 238000006722 reduction reaction Methods 0.000 description 1
- 230000011514 reflex Effects 0.000 description 1
- 239000011347 resin Substances 0.000 description 1
- 229920005989 resin Polymers 0.000 description 1
- 229910052702 rhenium Inorganic materials 0.000 description 1
- 229910052703 rhodium Inorganic materials 0.000 description 1
- 102220029901 rs140332992 Human genes 0.000 description 1
- 102200025316 rs143896146 Human genes 0.000 description 1
- 102200098283 rs1770043 Human genes 0.000 description 1
- 102200040468 rs387906826 Human genes 0.000 description 1
- 102220162337 rs772926677 Human genes 0.000 description 1
- 102220218329 rs774156512 Human genes 0.000 description 1
- 230000007017 scission Effects 0.000 description 1
- 125000003548 sec-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 150000004756 silanes Chemical class 0.000 description 1
- 239000002002 slurry Substances 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 235000015424 sodium Nutrition 0.000 description 1
- 239000001632 sodium acetate Substances 0.000 description 1
- 235000017281 sodium acetate Nutrition 0.000 description 1
- 239000012279 sodium borohydride Substances 0.000 description 1
- 229910000033 sodium borohydride Inorganic materials 0.000 description 1
- JVBXVOWTABLYPX-UHFFFAOYSA-L sodium dithionite Chemical compound [Na+].[Na+].[O-]S(=O)S([O-])=O JVBXVOWTABLYPX-UHFFFAOYSA-L 0.000 description 1
- 239000012312 sodium hydride Substances 0.000 description 1
- 229910000104 sodium hydride Inorganic materials 0.000 description 1
- 239000001488 sodium phosphate Substances 0.000 description 1
- 229910000162 sodium phosphate Inorganic materials 0.000 description 1
- AKHNMLFCWUSKQB-UHFFFAOYSA-L sodium thiosulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=S AKHNMLFCWUSKQB-UHFFFAOYSA-L 0.000 description 1
- 235000019345 sodium thiosulphate Nutrition 0.000 description 1
- PNGLEYLFMHGIQO-UHFFFAOYSA-M sodium;3-(n-ethyl-3-methoxyanilino)-2-hydroxypropane-1-sulfonate;dihydrate Chemical compound O.O.[Na+].[O-]S(=O)(=O)CC(O)CN(CC)C1=CC=CC(OC)=C1 PNGLEYLFMHGIQO-UHFFFAOYSA-M 0.000 description 1
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical compound O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 1
- 239000007787 solid Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 229940032094 squalane Drugs 0.000 description 1
- KXCAEQNNTZANTK-UHFFFAOYSA-N stannane Chemical class [SnH4] KXCAEQNNTZANTK-UHFFFAOYSA-N 0.000 description 1
- 239000001117 sulphuric acid Substances 0.000 description 1
- 235000011149 sulphuric acid Nutrition 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- IXZDIALLLMRYOU-UHFFFAOYSA-N tert-butyl hypochlorite Chemical compound CC(C)(C)OCl IXZDIALLLMRYOU-UHFFFAOYSA-N 0.000 description 1
- JRMUNVKIHCOMHV-UHFFFAOYSA-M tetrabutylammonium bromide Chemical compound [Br-].CCCC[N+](CCCC)(CCCC)CCCC JRMUNVKIHCOMHV-UHFFFAOYSA-M 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 230000007704 transition Effects 0.000 description 1
- DBGVGMSCBYYSLD-UHFFFAOYSA-N tributylstannane Chemical compound CCCC[SnH](CCCC)CCCC DBGVGMSCBYYSLD-UHFFFAOYSA-N 0.000 description 1
- ITMCEJHCFYSIIV-UHFFFAOYSA-N triflic acid Chemical compound OS(=O)(=O)C(F)(F)F ITMCEJHCFYSIIV-UHFFFAOYSA-N 0.000 description 1
- QAEDZJGFFMLHHQ-UHFFFAOYSA-N trifluoroacetic anhydride Chemical compound FC(F)(F)C(=O)OC(=O)C(F)(F)F QAEDZJGFFMLHHQ-UHFFFAOYSA-N 0.000 description 1
- AKQNYQDSIDKVJZ-UHFFFAOYSA-N triphenylsilane Chemical compound C1=CC=CC=C1[SiH](C=1C=CC=CC=1)C1=CC=CC=C1 AKQNYQDSIDKVJZ-UHFFFAOYSA-N 0.000 description 1
- NFHRNKANAAGQOH-UHFFFAOYSA-N triphenylstannane Chemical compound C1=CC=CC=C1[SnH](C=1C=CC=CC=1)C1=CC=CC=C1 NFHRNKANAAGQOH-UHFFFAOYSA-N 0.000 description 1
- 238000009281 ultraviolet germicidal irradiation Methods 0.000 description 1
- QRPLZGZHJABGRS-UHFFFAOYSA-N xi-5-Dodecanolide Chemical compound CCCCCCCC1CCCC(=O)O1 QRPLZGZHJABGRS-UHFFFAOYSA-N 0.000 description 1
- 239000008096 xylene Substances 0.000 description 1
- 229910052727 yttrium Inorganic materials 0.000 description 1
- 229910052725 zinc Inorganic materials 0.000 description 1
- 239000011701 zinc Substances 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P17/00—Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
- C12P17/02—Oxygen as only ring hetero atoms
- C12P17/06—Oxygen as only ring hetero atoms containing a six-membered hetero ring, e.g. fluorescein
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07B—GENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
- C07B53/00—Asymmetric syntheses
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D309/00—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings
- C07D309/02—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having no double bonds between ring members or between ring members and non-ring members
- C07D309/08—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having no double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D309/10—Oxygen atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D309/00—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings
- C07D309/16—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having one double bond between ring members or between a ring member and a non-ring member
- C07D309/28—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having one double bond between ring members or between a ring member and a non-ring member with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D309/30—Oxygen atoms, e.g. delta-lactones
Definitions
- the invention relates to a process for the preparation of enantiomerically enriched ⁇ -lactones.
- the invention also relates to use of said ⁇ - lactones in food or cosmetics or as pharma intermediates.
- ⁇ -lactones such as saturated ⁇ -lactones, ⁇ , ⁇ -unsaturated ⁇ -lactones and 3-hydroxy- ⁇ -lactones can suitably be used as (intermediates in the production of) flavors and/or fragrances and/or pharmaceuticals.
- the ⁇ , ⁇ -unsaturated (-)-(R)-massoialactone is useful as a flavoring agent with a butter and milk-like flavor (JP 08002891 B4, JP 07080867 B4). It is used as a flavor enhancer (JP 3523127 B2) and as an antibacterial agent (KR 2000066367 A).
- the saturated (+)-(R)- ⁇ -decalactone is for example used as flavor in dairy products, beverages, dentifrice, chewing gum, food and as part of fragrance compositions for colognes, perfumed articles, detergents, fabric softeners and hair preparations (US 6271194 B1 ). It is used as a fungal growth inhibitor (US 6060507 A).
- the ⁇ , ⁇ -unsaturated (-)-(R)-dodec-2-enolactone for example, is a flavor-enhancer of sweet fermentation flavor for traditional Japanese food (JP 3523127 B2).
- Saturated (+)- (R)- ⁇ -dodecalactone for example, is a widely used flavor and is part of fragrance compositions (US 6271194 B1 ).
- the ⁇ , ⁇ -unsaturated ⁇ -pentadec-2-enolactone for example, is a testosterone-5a-reductase inhibitor and used as such in hair growth stimulants (JP 2525179 B2).
- some ⁇ -lactones can be produced via chemical synthesis, for example, the compound ((-)-(R)-massoialactone) of formula (I)
- R 2 stands for CH 3 , CH 3 (CH 2 ) 2 , CH 3 (CH 2 ) 4 , CH 3 (CH 2 ) 6 was described by A. Nobuhara, Agr. Biol. Chem., (1968) vol. 32, no. 8, p1016-1020. In this route, the corresponding carbonyl compound was reacted in several steps (e.g. Reformatsky reaction, Grignard reaction, reduction etc.) to form the desired racemic compound of formula (3).
- steps e.g. Reformatsky reaction, Grignard reaction, reduction etc.
- a process comprising the step of a) reacting acetaldehyde and a substituted acetaldehyde of formula HC(O)CH 2 R, wherein R stands for an alkyl of at least 5 C-atoms, a cycloalkyl, an alkenyl, an alkynyl or for an aryl, wherein R may be substituted, in the presence of an aldolase to form the corresponding enantiomerically enriched compound of formula (1 )
- ⁇ -lactones can be prepared with a high enantiomeric excess (e.e.) without the need for expensive resolution agents or chiral precursors.
- the yield obtained is usually high.
- the process can be performed in water, making this process very attractive from an environmental point of view.
- the ⁇ -lactones may be prepared from readily available and cost effective starting materials.
- R preferably stands for an alkyl of at most 20 C-atoms, more preferably of at most 12 C-atoms; a cycloalkyl of at least 3 and at most 7 C-atoms, preferably at least 5 C-atoms, more preferably of at most 6 C-atoms; an alkenyl of at most 20 C-atoms, preferably at least 5 C-atoms, more preferably of at most 12 C- atoms; an alkynyl of at most 20 C-atoms, preferably at least 5 C-atoms, more preferably of at most 12 C-atoms; or for phenyl.
- the alkyl, alkenyl or alkynyl may be branched, but is preferably linear.
- linear alkyls in the definition of R include n-pentyl, n-hexyl, n-heptyl, n-octyl, n-nonyl.
- branched alkyls in the definition of R include 1 -methyl-butyl, 2-methyl-butyl, 3-methyl-butyl, 1-methyl-pentyl, 2- methyl-pentyl, 3-methyl-pentyl, 4-methyl-pentyl, 1 -ethyl-butyl, 2-ethyl-butyl, 1-methyl- hexyl, 2-methyl-hexyl, 3-methyl-hexyl, 4-methyl-hexyl, 5-methyl-hexyl, 1-ethyl-pentyl, 2- ethyl-pentyl, 3-ethyl-pentyl.
- linear alkenyls in the definition of R include pent-1-enyl, pent-2-enyl, pent-3-enyl, pent-4-enyl etc.
- branched alkenyls in the definition of R include 1-methyl-but-1-enyl, 2-methyl-but-1-enyl, 3-methyl-but-1- enyl, 1-methyl-but-2-enyl, 2-methyl-but-2-enyl, 3-methyl-but-2-enyl, 1-methyl-but-3- enyl, 2-methyl-but-3-enyl, 3-methyl-but-3-enyl, 1-methyl-pent-1-enyl, 2-methyl-pent-1- enyl, 3-methyl-pent-1-enyl, 4-methyl-pent-1-enyl, 1-methyl-pent-2-enyl, 2-methyl-pent- 2-enyl, 3-methyl-pent-2-enyl, 4-methyl-pent-2-enyl, 1-methyl-pent-2-enyl, 2-
- linear alkynyls in the definition of R include pent-1-ynyl, pent-2-ynyl, pent3-ynyl, pent-4-ynyl etc.
- R stands for a linear alkyl, a linear alkenyl or for phenyl.
- C-atoms of possible substituents are not included.
- substituents if R stands for an alkyl, alkenyl or alkynyl include: alkyls, for example methyl, ethyl; alkoxy groups, for example methoxy, ethoxy; oxo, halogens, for example Cl, F, Br, I; aryl, for example phenyl; cycloalkyl, for example cyclohexyl; Examples of substituents, if R stands for an aryl, preferably phenyl; or if R stands for a cycloalkyl, preferably cyclohexyl; include: alkyl, preferably an alkyl of 1-3 C-atoms, for example methyl or ethyl; alkoxy, for example methoxy, ethoxy; halogens, for example Cl, F, Br, I; hydroxy; NO 2 .
- 'aldolase an enzyme with aldolase activity
- the aldolase used is 2-deoxy-D-ribose 5-phosphate aldolase (DERA, EC 4.1.2.4) or mutants hereof, more preferably DERA from Escherichia coli or mutants hereof.
- DERA 2-deoxy-D-ribose 5-phosphate aldolase
- the amino acid sequence of DERA from Escherichia coli K12 is given in SEQ ID No. 1 (SEQ ID No. 1 : wild-type DERA from Escherichia coli K12).
- the gene sequence from Escherichia coli K12 encoding this amino acid sequence is given in SEQ ID No. 2. (SEQ ID No. 2: wild-type deoC gene from Escherichia coli K12).
- the aldolase used in the process of the present invention is a DERA from Escherichia coli, Bacillus subtilis or from a Geobacillus species, or a mutant thereof.
- An example of an aldolase from a Geobacillus species or a mutant thereof is disclosed in Greenberg, W. A. et al, 2004, PNAS, 5788-5793.
- Wild-type enzymes are enzymes as can be isolated from natural sources or environmental samples; naturally occurring mutants of such enzymes, i.e. mutants as also can be isolated from natural sources or environmental samples, within the scope of this patent application are also considered to be wild-type enzymes.
- mutants for this patent application, therefore solely will intend to indicate that they have been or are being obtained from wild-type enzymes by purposive mutations of the DNA (nucleic acid) encoding said wild-type enzymes (whether by random mutagenesis, for instance with the aid of PCR or by means of UV irradiation, or by site-directed mutation, e.g. by PCR methods, saturation mutagenesis etc.
- Mutants of the aldolase may have improved properties, for example with respect to selectivity for the substrate and/or activity and/or stability and/or solvent resistance and/or pH profile and/or temperature profile.
- the mutant has at least one amino acid substitution at one or more of the positions K13, T19, Y49, N80, D84, A93, E127, A128, K146, K160, 1166, A174, M185, K196, F200, or S239 in SEQ ID No.1 , or at positions corresponding thereto, preferably at position F200 or at a position corresponding thereto, and/or a deletion of at least one amino acid at one of the positions S258 or Y259 in SEQ ID No.1 , optionally in combination with C-terminal extension, preferably by one of the fragments TTKTQLSCTKW (SEQ ID No.11 , C- terminal extension 2) and KTQLSCTKW [SEQ ID No.13, C-terminal extension 3] and/or in combination with N-terminal extension.
- TTKTQLSCTKW SEQ ID No.11 , C- terminal extension 2
- KTQLSCTKW [SEQ ID No.13, C-terminal extension 3] and/
- SEQ ID No.1 1 An example of a nucleic acid sequence encoding SEQ ID No.1 1 is given in SEQ ID No. 12 (SEQ ID No. 12, coding sequence for C-terminal extension 2).
- SEQ ID No. 13 An example of a nucleic acid sequence encoding SEQ ID No. 14 (SEQ ID No. 14, coding sequence for C-terminal extension 3).
- Amino acid residues of other aldolase sequences corresponding to positions of the amino acid residues in the wild-type amino sequence of the E. coli K12 DERA [SEQ ID No.1] can be identified by performing ClustalW version 1.82 multiple sequence alignments (http://www.ebi.ac.uk/clustalw) at default settings (matrix: Gonnet 250; GAP OPEN: 10; END GAPS: 10; GAP EXTENSION: 0.05; GAP DISTANCES: 8). Amino acid residues which are placed in the same column as an amino acid residue of the E. coli K12 wild-type DERA sequence as given in [SEQ ID No.1] in such alignments are defined to be positions corresponding to this respective amino acid residue of the E. coli K12 wild-type DERA [SEQ ID No.1].
- amino acids in the sequences and at the various positions therein are indicated by their one letter code (respectively by their three letter code) as follows:
- the mutant aldolase used has at least one of the amino acid substitutions in, or corresponding to the substitutions in SEQ ID No.1 selected from the group consisting of: a. K13 and/or K196 replaced by a positively charged amino acid, preferably by R or H; b. T19 and/or M185 replaced by another amino acid, preferably by another amino acid selected from the groups consisting of hydrophilic amino acids, in particular consisting of S, T, C, Q, and N, and/or hydrophobic amino acids, in particular consisting of V, L and I; c. Y49 replaced by an aromatic amino acid selected from the group consisting of F and W; d.
- N80 and/or 1166 and/or S239 replaced by another amino acid selected from the group of hydrophilic amino acids consisting of T, S, C, Q and N; e. D84 and/or A93 and/or E127 replaced by another, preferably smaller, amino acid selected from the group of small amino acids consisting of, in order of decreasing size, E, T, N, P, D, C, S, A, and G; f.
- A128 and/or K146 and/or K160 and/or A174 and/or F200 replaced by another amino acid selected from the group of hydrophobic amino acids consisting of I, L, M, V, F, and Y; and/or has a deletion of at least one amino acid at the positions S258 and Y259 in SEQ ID No.1 or at positions corresponding thereto, optionally in combination with C-terminal extension, preferably by one of the fragments TTKTQLSCTKW [SEQ ID No.11] and KTQLSCTKW [SEQ ID No.13] and/or in combination with N-terminal extension.
- the mutant aldolase used may be truncated by deletion of at least one amino acid residue from SEQ ID No. 1 , e.g. by deletion of S258 and/or Y259 or of positions corresponding thereto and then extended, preferably by one of the fragments TTKTQLSCTKW [SEQ ID No.11] and KTQLSCTKW [SEQ ID No.13].
- the mutant aldolase has one or more of the mutations in, or corresponding to the mutations in SEQ ID No.1 selected from the group of K13R, T19S, Y49F, N80S, D84G, A93G, E127G, A128V, K146V, K160M, I166T, A174V, M185T, M185V, K196R, F200I, F200M, F200V, S239C, ⁇ S258, ⁇ Y259, C-terminal extension by TTKTQLSCTKW [SEQ ID No.11], and C-terminal extension by KTQLSCTKW [SEQ ID No.13].
- the mutant aldolase has at least the following two mutations in, or corresponding to the two mutations in SEQ ID No. 1 selected from the group of F200I and ⁇ Y259; F200M and ⁇ Y259; F200V and ⁇ Y259; F200I and C-terminal extension by KTQLSCTKW [SEQ ID No.13]; F200M and C-terminal extension by KTQLSCTKW [SEQ ID No.13]; and F200V and C-terminal extension by KTQLSCTKW [SEQ ID No.13];
- the amino acid sequence of Escherichia coli K12 DERA, wherein the F200I position is mutated is given in SEQ ID No. 3 (SEQ ID No. 3: F200I mutant of Escherichia coli K12 DERA).
- the aldolase used in the process of the present invention is preferably the aldolase of SEQ ID No. 3.
- An example of a gene encoding the amino acid sequence of SEQ ID No. 3 is given in SEQ ID No. 4 (SEQ ID No. 4: mutated cfeoC gene encoding F200I mutant of Escherichia coli K12 DERA).
- SEQ ID No. 5 The amino acid sequence of Escherichia coli K12 DERA, wherein the F200I position is mutated and the Y259 position is deleted is given in SEQ ID No. 5 (SEQ ID No. 5: F200I/ ⁇ Y259 mutant of Escherichia coli K12 DERA).
- SEQ ID No. 6 An example of a gene encoding the amino acid sequence of SEQ ID No. 5 is given in SEQ ID No. 6 (SEQ ID No. 6: mutated deoC gene encoding F200I/ ⁇ Y259 mutant of Escherichia coli K12 DERA).
- the amino acid sequence of Escherichia coli K12 DERA, wherein the F200I position is mutated and wherein the C-terminus is extended by the amino acid sequence of SEQ ID No. 13 is given in SEQ ID No. 7 (SEQ ID No. 7: F200I and C- terminal extension 3 mutant of Escherichia coli K12 DERA).
- SEQ ID No. 7 F200I and C- terminal extension 3 mutant of Escherichia coli K12 DERA
- An example of a gene encoding the amino acid sequence of SEQ ID No. 7 is given in SEQ ID No. 8 (SEQ ID No. 8: mutated deoC gene encoding F200I and C-terminal extension 3 mutant of Escherichia coli K12 DERA).
- SEQ ID No. 8 mutated deoC gene encoding F200I and C-terminal extension 3 mutant of Escherichia coli K12 DERA.
- F200I position is mutated, the S258 and Y259 positions are deleted and wherein the C- terminus is extended by the amino acid sequence of SEQ ID No. 11 is given in SEQ ID No. 9 (SEQ ID No. 9: F200I, ⁇ S258, ⁇ Y259 and C-terminal extension 2 mutant of Escherichia coli K12 DERA).
- SEQ ID No. 9 SEQ ID No. 9: F200I, ⁇ S258, ⁇ Y259 and C-terminal extension 2 mutant of Escherichia coli K12 DERA.
- SEQ ID No. 10 SEQ ID No 10: mutated deoC gene encoding F200I, ⁇ S258, ⁇ Y259 and C-terminal extension 2 mutant of Escherichia coli K12 DERA.
- the aldolase (wild type or mutant) may be used in any form.
- the aldolase may be used - for example in the form of a dispersion, emulsion, a solution or in immobilized form - as crude enzyme, as a commercially available enzyme, as an enzyme further purified from a commercially available preparation, as an aldolase obtained from its source by a combination of known purification methods, in whole (optionally pemneabilized and/or immobilized) cells that naturally or through genetic modification possess aldolase activity, or in a lysate of cells with such activity etc. etc.
- the process of the invention may for example be performed using the reaction conditions as described in US 5,795,749, for instance in column 4, lines 1-18 or for instance using fed-batch reaction conditions as described in W. A. Greenberg et a/., PNAS, vol. 101 , pp 5788-5793, (2004).
- 2-substituted aldehydes having a low solubility in water it may be advantageous to feed those 2-substituted aldehydes to the reaction mixture.
- acetaldehyde to the reaction mixture.
- both acetaldehyde and the 2-substituted aldehyde are fed to the reaction mixture.
- the process of the invention is performed under the reaction conditions as described in WO03/006656:
- the carbonyl concentration that is the sum of the concentration of acetaldehyde, aldehyde of formula HC(O)CH 2 R 1 and the intermediate product formed in the reaction between the aldehyde and the aldehyde of formula HC(O)CH 2 R 1 , is preferably held at a value below 6 moles/l during the synthesis process. It will be clear to one skilled in the art that slightly higher concentrations for a (very) short time will have little effect. More preferably, the carbonyl concentration is chosen between 0.01 and 5 moles per liter of reaction mixture, most preferably between 0.05 and 4 moles per liter of reaction mixture.
- the reaction temperature and the pH are not critical and both are chosen as a function of the substrate.
- the reaction is carried out in the liquid phase.
- the reaction can be carried out for example at a reaction temperature between -5 and +50 0 C, preferably between 0 and 40 0 C, more preferably between 5 and 37°C; and at a pH between 5.5 and 9, preferably between 6 and 8.
- the reaction is preferably carried out at more or less constant pH, use for example being made of a buffer or of automatic titration.
- a buffer for example sodium and potassium bicarbonate, sodium and potassium phosphate, triethanolamine/HCI, bis-tris-propane/HCI and HEPES/KOH can be applied.
- a potassium or sodium bicarbonate buffer is applied, for example in a concentration between 10 and 400 mmoles/l of reaction mixture.
- the molar ratio between the total quantity of aldehyde and the total quantity of 2-substituted aldehyde is not very critical and preferably lies between 1.5:1 and 4: 1 , in particular between 1.8:1 and 2.2: 1.
- the amount of aldolase used in the process of the invention is in principle not critical. It is routine experimentation to determine the optimal concentration of enzyme for an enzymatic reaction and so the person skilled in the art can easily determine the amount of aldolase to be used.
- surfactants may be used to enhance the reaction rate.
- surfactants include anionic surfactants, for example linear alkyl sulphates, in particular sodium dodecylsulphate (SDS) or sodium hexadecylsulphate (SHS); cationic surfactants, for instance cetyl trimethylammoniumbromide (CTAB); and nonionic surfactants, for instance ethoxylated alcohols, in particular tetra(ethyleneglycol) tetradecylether.
- cosolvents may be added to help solubilize the substrate. Examples of cosolvents include dimethylsulphoxide, dimethylformamide, methanol, ethanol, isopropanol, tert- butylmethyl ether, i-butyl-methylketone.
- step a) of the process of the present invention is performed in an emulsion.
- an emulsion is defined as a ternary mixture of water, a surfactant and an oil phase, which may be an aliphatic alkane.
- Examples of aliphatic alkanes which may be used as oil phase in an emulaion include: cyclohexane, isooctane, tetradecane, hexadecane, octadecane, squalane.
- the oil-in- water (O/W) emulsion is formed by intense mixing which leads to an increased internal surface and thus facilitates mass transfer between the phases.
- Especially interesting emulsions are microemulsions that are thermodynamically stable and have a domain size in the nanometer range (see for instance Clapes et al., Chem. Eur. J. 2005, 11 , 1392-1401 and Schwuger et al., Chem. Rev. 1995, 95, 849-864.).
- the enantiomerically enriched compound of formula (1) may be oxidized to form the corresponding enantiomerically enriched compound of formula (5)
- the invention also relates to a process comprising the steps of a) reacting acetaldehyde and a substituted acetaldehyde of formula HC(O)CH 2 R, wherein R stands for an alkyl of at least 5 C-atoms, a cycloalkyl, an alkenyl, an alkynyl or for an aryl, wherein R may be substituted, in the presence of an aldolase to form the corresponding enantiomerically enriched compound of formula (1) "
- R stands for an alkyl of at least 5 C-atoms, a cycloalkyl, an alkenyl, an alkynyl or for an aryl as described above, wherein R may be substituted as described above.
- the enantiomerically enriched compound of formula (1) may be oxidized by peroxides or by other oxidizing agents.
- peroxides include hydrogen peroxide and tert-butyl hydroperoxide.
- other oxidizing agents include peracids (e.g. meta-chlorobenzoic peracid or peracetic acid), hypochlorites (e.g.
- bleach or t-butyl hypochlorite perborates, N-oxides, permanganates, chromates, for instance K 2 Cr 2 O 7 ; halogens, for instance Br 2 and Cl 2 ; chlorates, for instance KCIO 3 ; bromates, for instance KBrO 3 ; perchlorates, periodates; peroxymonosulphates, for instance K 2 HSO 5 (e.g. oxone®); peroxodisulphates, NiO 4 and air/oxygen.
- the oxidizing agent used in the process of the invention is Br 2 .
- the oxidation may be carried out in the presence of an appropriate catalyst, such as for example salts or oxides of the metals V, Ce, Mn, Ni, Fe, Cu, Os, Mo, W, Re, or Ru; or organic catalysts, for example isobutyraldehyde in the case of air/oxygen or for example tetramethylpiperidine N-oxide (TEMPO) in the case of bleach.
- an appropriate catalyst such as for example salts or oxides of the metals V, Ce, Mn, Ni, Fe, Cu, Os, Mo, W, Re, or Ru
- organic catalysts for example isobutyraldehyde in the case of air/oxygen or for example tetramethylpiperidine N-oxide (TEMPO) in the case of bleach.
- TEMPO tetramethylpiperidine N-oxide
- the oxidation by peroxides or other oxidizing agents is generally performed in a solvent, such as for instance dichloromethane, chloroform, 1 ,2- dichloroethane, methanol, ethanol, 2-propanol, acetonitrile, acetic acid, toluene, water, N-methyl-2-pyrrolidone (NMP), dimethylsulphoxide (DMSO), dimethylformamide (DMF), tetrahydrofurane (THF), or tert-butyl methyl ether (TBME).
- a solvent such as for instance dichloromethane, chloroform, 1 ,2- dichloroethane, methanol, ethanol, 2-propanol, acetonitrile, acetic acid, toluene, water, N-methyl-2-pyrrolidone (NMP), dimethylsulphoxide (DMSO), dimethylformamide (DMF), tetrahydrofurane (THF), or tert
- biphasic solvent systems consisting of an aqueous phase and an organic phase in the presence of a phase-transfer catalyst, such as for instance quarternary ammonium salt or quarternary phosphonium salt (for instance tetraalkylammonium halide, e.g. tetrabutylammonium bromide) or crown ether (for example 18-crown-6).
- a phase-transfer catalyst such as for instance quarternary ammonium salt or quarternary phosphonium salt (for instance tetraalkylammonium halide, e.g. tetrabutylammonium bromide) or crown ether (for example 18-crown-6).
- Suitable solvents comprises ionic liquids such as, for example, 1 ,3-dialkyl imidazolium salts or N-alkyl pyridinium salts of acids such as for example hexafluorophosphoric acid or tetrafluoroboric acid or trifluoromethane sulphonic acid, or with (CF 3 SO 2 ) 2 N ' as anionic counterpart.
- ionic liquids such as, for example, 1 ,3-dialkyl imidazolium salts or N-alkyl pyridinium salts of acids such as for example hexafluorophosphoric acid or tetrafluoroboric acid or trifluoromethane sulphonic acid, or with (CF 3 SO 2 ) 2 N ' as anionic counterpart.
- a reaction temperature of at least -20 0 C is applied. More preferably, a temperature of at least O 0 C is applied, even more preferably a temperature between
- the oxidation of an enantiomerically enriched compound of formula (2) is performed at a temperature lower than 150 0 C, more preferably lower than 10O 0 C, even more preferably lower than 6O 0 C, most preferably lower than 40 0 C.
- the optimal amount of oxidizing agent used for the oxidation of the enantiomerically enriched compound of formula (1 ) can be easily obtained by the person skilled in the art through routine experimentation.
- the molar amount of oxidizing agent used is at least 0.5 with respect to the amount of compound of formula (1), more preferably at least 1 with respect to the amount of compound of formula (1).
- the molar amount of oxidant used is lower than 20 with respect to the amount of compound of formula (1), more preferably lower than 10 with respect to the amount of compound of formula (1), most preferably lower than 5 with respect to the amount of compound of formula (1).
- the invention in another aspect, relates to a process comprising the steps of: a) reacting acetaldehyde and a substituted acetaldehyde of formula HC(O)CH 2 R 1 , wherein R 1 stands for H, an alkyl, a cycloalkyl, an alkenyl, an alkynyl or for an aryl, wherein R 1 may be substituted, in the presence of an aldolase to form an enantiomerically enriched compound of formula (6)
- R 1 preferably stands for an alkyl of 1 - 20 C-atoms, more preferably at least 5, and also more preferably of at most 12 C-atoms; a cycloalkyl of at least 3 and at most 7 C-atoms, more preferably of at most 6 C-atoms; an alkenyl of at most 20 C-atoms, at least 2 C-atoms, more preferably of at most 12 C-atoms; an alkynyl of at most 20 C-atoms, more preferably of at most 12 C-atoms; or for phenyl.
- R 1 stands for an alkyl, alkenyl or alkynyl chain of at least 2, 3, 4 or of at least 5 C-atoms.
- the alkyl, alkenyl or alkynyl may be branched, but is preferably linear.
- linear alkyls include ethyl, n-propyl, n- butyl, n-pentyl, n-hexyl, n-heptyl, n-octyl, n-nonyl.
- branched alkyls include i-propyl and i-butyl
- linear alkenyls include but-1-enyl, but-2-enyl, but-3- enyl, pent-1-enyl, pent-2-enyl, pent-3-enyl, pent-4-enyl etc.
- Examples of branched alkenyls include i-propenyl, i-but-1-enyl, i-but-2-enyl.
- Examples of linear alkynyls include but-1-ynyl, but-2-ynyl, but-3-ynyl, pent-1-ynyl, pent-2-ynyl, pent3-ynyl, pent-4- ynyl etc.
- R 1 stands for a linear alkyl, a linear alkenyl or for phenyl.
- C-atoms of possible substituents are not included.
- substituents if R 1 stands for an alkyl, alkenyl or alkynyl include: alkyls, for example methyl, ethyl; alkoxy groups, for example methoxy, ethoxy; oxo, halogens, for example Cl, F, Br, I; aryl, for example phenyl; cycloalkyl, for example cyclohexyl; Examples of substituents, if R 1 stands for an aryl, preferably phenyl; or if R 1 stands for a cycloalkyl, preferably cyclohexyl; include: alkyl, preferably an alkyl of 1-3 C-atoms, for example methyl or ethyl; alkoxy, for example methoxy, ethoxy; halogens, for example Cl, F, Br, I; hydroxy; NO 2 .
- the dehydration may be performed by heating the enantiomerically enriched compound of formula (7).
- the compound of formula (7) is dehydrated by heating in the presence of a dehydration catalyst, for instance an Lewis or Br ⁇ nsted acid or a base.
- the compound of formula (7) is dehydrated by heating in the presence of an acid, more preferably in the presence of a strong acid, that is an acid with a pKa of 4 or smaller.
- Br ⁇ nsted acids which may be used for dehydration include hydrochloric acid, sulphuric acid, methanesulphonic acid, oxalic acid, formic acid, acetic acid, trifluoro acetic acid, p-toluenesulphonic acid and boric acid.
- Lewis acids and other dehydration catalysts which may be used for dehydration include hydrogen sulphates, for instance KHSO 4 , anhydrous CuSO 4 , ZnCI 2 , iodine, P 2 O 5 , BF 3 -etherate, sodium acetate/acetic acid, phthalic anhydride, acetic anhydride, trifluoroacetic acid anhydride, thionyl chloride/pyridine, phosphorylchloride (POCI 3 ), mesyl chloride, tosyl chloride, carbodiimides or acidic ion exchange resins.
- hydrogen sulphates for instance KHSO 4 , anhydrous CuSO 4 , ZnCI 2 , iodine, P 2 O 5 , BF 3 -etherate, sodium acetate/acetic acid, phthalic anhydride, acetic anhydride, trifluoroacetic acid anhydride, thionyl chloride/pyridine, phosphorylchloride (PO
- the dehydration of an enantiomerically enriched compound of formula (7) may be further promoted by removal of the unsaturated reaction product, for example by distillation.
- the dehydration of an enantiomerically enriched compound of formula (7) may be further promoted by removal of the water formed during dehydration, for example by azeotropic distillation.
- the dehydration may be performed without solvent, in the neat dehydration catalyst/reagent or in an aqueous solution of the dehydration catalyst.
- the dehydration is performed in a solvent, more preferably in an organic solvent for instance in DMSO 1 DMF, alcohol, for instance methanol, ethanol, isopropanol; TBME, THF, chloroform, dichloromethane, 1 ,2-dichloroethane, acetonitrile or acetone.
- the dehydration is performed in a solvent capable of forming azeotropes with water, such as for instance toluene, benzene, xylene or ethyl acetate.
- the reaction temperature of the dehydration of an enantiomerically enriched compound of formula (1) is preferably at least O 0 C. More preferably, a temperature of at least 40°C is applied, even more preferably a temperature between 60 and 1 15°C is applied.
- the dehydration of an enantiomerically enriched compound of formula (1 ) is perfomed at a temperature lower than 200 0 C, more preferably lower than 150 0 C.
- the optimal amount of dehydration catalyst used in the dehydration of an enantiomerically enriched compound of formula (7) can be easily obtained by the person skilled in the art through routine experimentation.
- the concentration of the dehydration catalyst in the dehydration reaction mixture is preferably at least 0.05% (w/w). More preferably, it is at least 0.1% (w/w), even more preferably at least 0.5% (w/w) and most preferably at least 1% (w/w).
- the concentration of dehydration catalyst is lower than 95% (w/w), more preferably lower than 50%, even more preferably lower than 20% (w/w), most preferably lower than 10% (w/w).
- the optimal amount of dehydration catalyst used may depend on the combination of the choice of dehydration catalyst, the solvent and the substrate. For example, if para-toluenesulphonic acid is used, the concentration of dehydration catalyst concentration is typically between 1 and 5% (w/w).
- a dehydration catalyst is capable of binding 1 molar equivalent of water, it is called a stoichoimetric dehydration catalyst.
- stoichoimetric dehydration catalysts include for instance thionylchloride, acetic anhydride or mesyl chloride.
- a stoichoimetric dehydration catalyst is used for the dehydration, it is preferably used in a molar amount that is at least equivalent to the amount of compound of formula (7). More preferably, the molar ratio of stoichoimetric dehydration catalyst and the compound of formula (7) is chosen between 10:1 and 1 :1 , even more preferably between 5:1 and 1 :1 , most preferably between 2:1 and 1 :1.
- a dehydration catalyst is capable of binding more than 1 molar equivalent of water, it may be advantageous to use a molar amount that is less than the equivalent amount of compound of formula (7), for example in a molar ratio of dehydration catalyst and the compound of formula (7) of between 0.5: 1 and 1 : 1.
- An example of a dehydration catalyst capable of binding more than 1 molar equivalent of water is phosphoryl chloride.
- the enantiomerically enriched compound of formula (3) prepared in the process of the invention may be hydrogenated by a suitable hydrogenating agent to form the corresponding enantiomerically enriched compound of formula (4)
- the invention also relates to a process comprising the steps of: a) reacting acetaldehyde and a substituted acetaldehyde of formula HC(O)CH 2 R 1 , wherein R 1 stands for H, an alkyl, a cycloalkyl, an alkenyl, an alkynyl or for an aryl, wherein R 1 may be substituted, in the presence of an aldolase to form an enantiomerically enriched compound of formula (6)
- an enantiomerically enriched compound of formula (3) is known to the person skilled in the art.
- a suitable hydrogenating agent to be used in the hydrogenation of the enantiomerically enriched compound of formula (3) in principle all hydrogenating agents known to the skilled person to be applicable in the hydrogenation of a double bond may be applied.
- the enantiomerically enriched compound of formula (3) may be hydrogenated with hydrogen, with hydrides or with combinations of alkalimetals and ammonia or amines.
- aluminum hydrides for instance LiAIH 4 , LiHAI(OM
- the hydrogenation of the enantiomerically enriched compound of formula (3) is performed in the presence of a hydrogenation catalyst.
- a hydrogenation catalyst for example, the hydrogenation may be performed in the presence of a chemical hydrogenation catalyst. Alternatively the hydrogenation may be performed in the presence of a biocatalyst.
- Examples of chemical hydrogenation catalysts include metals, for example the transitions metals Ni, Pd, Pt, Co, Rh, Ir, Ru, Mo, Cu; or salts or complexes thereof.
- a widely used catalyst for the hydrogenation of enantiomerically enriched compounds of formula (3) is Pd/C (see for instance JP 10158257 A2 which describes the hydrogenation of enantiomerically enriched ⁇ -decenolactone and ⁇ - dodecenolactone using Pd/C).
- the hydrogenation of the enantiomerically enriched compound of formula (3) may be carried out in a hydrogen containing atmosphere.
- This atmosphere may for example be applied at pressures lower than 35 MPa, preferably lower than 1 MPa, more preferably between 0.1 and 0.6 MPa.
- the temperature in the hydrogenation may for example be in the range of -20 0 C to 150 0 C, preferably between 0 0 C and 100 0 C, more preferably from 20°C to 50°C.
- the hydrogenation of an enantiomerically enriched compound of formula (3) may be carried out in bulk or in a solvent, for example in an alcohol, for instance methanol, ethanol or isopropanol; ethyl acetate, THF, dioxane, diethyl ether, MTBE, water or acetic acid.
- a solvent for example in an alcohol, for instance methanol, ethanol or isopropanol; ethyl acetate, THF, dioxane, diethyl ether, MTBE, water or acetic acid.
- biocatalyst which can be used in the hydrogenation of the enantiomerically enriched compound of formula (3) are known to the skilled person. See for a specific example for instance ter Burg, N and van der Schaft, P. H., Trends in Flavour Research, 1994, p481-486, who describe the hydrogenation of 2-decen-5-olide by Baker's yeast.
- a biocatalyst for example the cells of Saccharomyces cerevisiae or other species, for example Polyporus durus, lschnoderna benzoinum, Bjerkandera adusta, Poria xantha, Pleurotus ostreatus, Saccharomyces delbrueckii, Pichia ohmeri, Pichia anomala, Pichia stipitis, Debaryomyces hansenii, Zymomonas mobilis, Zygosaccharomyces rouxii, Schawnniomyces occidentalis, Sarcina lutea or Geotrichum candidum; may be used.
- Saccharomyces cerevisiae or other species for example Polyporus durus, lschnoderna benzoinum, Bjerkandera adusta, Poria xantha, Pleurotus ostreatus, Saccharomyces delbrueckii, Pichia ohmeri
- the hydrogenation may be performed under conditions known to the person skilled in the art to be applicable to whole cell biocatalytic reactions, for example in a buffer at a pH of between 2.5 and 7, preferably at a pH of between 3 and 6.5.
- the temperature during the process may for example be in the range of 20-37 0 C 1 preferably in the range of 27-37°C.
- a cosubstrate may be added to provide the reduction equivalents such as NADH and NADPH in the whole cells used as biocatalyst.
- a cosubstrate for instance a sugar, preferably glucose, may be used.
- the cells may for example be used in free or immobilised form at concentrations of 2-30 g/L dry cell weight, preferably 5-20 g/L dry cell weight.
- the cells may be aerated.
- the enantiomerically enriched compound of formula (3) may be added to the cells following a feeding protocol, and/or additives, such as for example adsorbent resins, cyclodextrins or organic solvents, may be employed.
- enantiomeric excess e.e.
- the enantiomeric excess is > 80%, more preferably > 85%, even more preferably > 90%, in particular >95%, more in particular > 97%, even more in particular > 98%, most in particular > 99%.
- the stereochemistry of the excess of enantiomer (the (R)-enantiomer of the compound of formula (6) or the (S)-enantiomer of the compound of formula (6)) formed depends on the choice of aldolase.
- aldolases preferably catalyze the formation of the (R)-enantiomer of the compound of formula (6) and which aldolases preferably catalyze the formation of the (S)-enantiomer of the compound of formula (6).
- R 1 is as described herein.
- R 1 is as described herein.
- the invention also relates to the use of an enantiomerically enriched ⁇ -lactone obtained in a process according to the invention in food, cosmetics or as a pharma intermediate.
- E. coli TOP10 cells were freshly transformed according to the suppliers procedure with pBAD//Wyc-HisC plasmids (Invitrogen), in which the wild-type deoC gene from E. coli K12 (SEQ ID No. 2) and a mutated deoC gene from E. coli K12 (SEQ ID No. 4), containing a A598T nucleotide transversion resulting in the exchange of Phe at position 200 of the wild-type DERA amino acid sequence of E. coli K12 (SEQ ID No. 1 ) for lie at position 200 (SEQ ID No. 3), had been cloned into the ⁇ /col and EcoRI sites, respectively.
- Luria Bertani medium 10 g/l tryptone, 5 g/l yeast extract, 5 g/l NaCI containing 100 ⁇ g/ml carbenicillin
- the expression of the wild-type and mutant genes, coding for wild- type and F200I mutant DERA, respectively, were induced by addition of 0.1% (w/v) L- arabinose at cell densities of OD 620 1. After 18 hours of cultivation (OD 62 O generally around 20) the cells were harvested by centrifugation (12 minutes at 12,227x g at 5°C). The wet cells (generally more than 300 g) were washed with 0.1 M K-phosphate buffer (pH 7.0) and resuspended in volumes of a 50 mM triethanolamine buffer (pH 7.2) corresponding to three times their wet cell weight. Cells were disrupted in a nanojet homogeniser (Haskel) at 1600 bar (double run) and subsequently centrifuged (34,524x g for 60 min at 4°C) to obtain the cell-free extracts (supernatant).
- a nanojet homogeniser Heaskel
- the DERA activities measured by the DERA Activity Assay as described below were 1.6 kU/ml cfe for both wild-type and F200I mutant DERA.
- the specific DERA activity given in U/mg total protein in the cfes was determined to be 53 and 55 for wild-type and F200I mutant DERA, respectively.
- the cfes were frozen and stored at -20°C until further use.
- the formed D-glyceraldehyde 3-phosphate is subsequently converted by the auxiliary enzyme triosephosphate isomerase to dihydroxyacetone phosphate, which is reduced to L-glycerol 3-phosphate by L-glycerol 3-phosphate dehydrogenase (both auxiliary enzymes from Roche Diagnostics) with an equimolar amount of NADH as cosubstrate.
- 1 Unit of DERA activity is defined as the enzyme amount necessary to convert 1 ⁇ mol 2-deoxy-D-ribose 5-phosphate in 1 minute at room temperature (25° C) in 50 mM triethanolamine buffer pH 7.2.
- the activity assays were carried out with 10 ⁇ l cfe of a suitable dilution in 50 mM triethanolamine pH 7.2 (usually more than 1 , 000-fold for wilde-type and mutant DERA), 0.3 mM NADH and 5 mM 2-deoxy-D-ribose 5-phosphate as substrate concentration in 50 mM triethanolamine pH 7.2 and an excess of both auxiliary enzymes (more than 1.5 U/ml L-glycerol 3-phosphate dehydrogenase and more than 4.5 U/ml triosephosphate isomerase) in a total reaction volume of 1 ml.
- the assay was started by adding 10 ⁇ l of 500 mM 2-deoxy-D-ribose 5-phosphate stock solution to the reaction mixture in a 1 ml cuvette and by subsequent mixing. The consumption of NADH was followed using a PerkinElmer Lambda 20 spectrophotometer at 340 nm.
- 6-pentyl-tetrahydropyran-2,4-diol was prepared from hexanal and acetaldehyde (conversion 70%).
- ⁇ PThpD was subsequently oxidized with bromine in an aqueous solution in presence of BaCO 3 .
- the aqueous suspension was prepared by addition of two equivalents of the carbonate (39.5 g) to the aqueous solution containing the ⁇ PThpD (ca. 100 mM). After cooling it to to 0 0 C, two equivalents of bromine (200 mmol, 10.2 ml) were fed to the suspension over 2 hours. Then the mixture was allowed to warm to 25°C for 4 hours after which GC showed full conversion of the starting material. The reaction was quenched by addition of sodium thiosulphate. The carbonate salt was filtered off and the aqueous phase was extracted three times with ethyl acetate.
- Step 3 Dehydration of 4-hvdroxy-6-propyl-tetrahvdro-pyran-2-one to 6-propyl-5.6- dihvdro-pyran-2-one
- the reactions were stirred at 25°C.
- the concentration of 6-propyl- tetrahydropyran-2,4-diol (6PThpD) was determined by GC.
- the initial reaction rate for 200 kU/L DERA activity was obtained by linear regression from four samples in which the 6PThpD concentration (mM) was determined. These four samples were taken at 15, 30, 45 and 60 min after the start of the reaction and analyzed by GC. The results are shown in Table 1 below. Table 1. Comparison of activity of DERA WT of SEQ ID No. 1 with DERA mutant F200I of SEQ ID No. 3 in the synthesis of 6-propyl-tetrahydropyran-2,4-diol (6PThpD).
- Wild type DERA was tested in a microemulsion system according to Clapes et al, Chem. Eur. J. 2005, 11 , 1392-1401.
- the octanal concentration was 100 mM and the acetaldehyde concentration 200 mM in all experiments.
- a 5 M acetaldehyde stock solution in water was freshly prepared and its pH was titrated to 7.2.
- Hexadecane 150 mg
- the surfactant tetra(ethylene glycol) tetradecyl ether C14E4 100 mg
- 0.25 mmol octanal y mg
- Acetaldehyde stock solution 100 ⁇ l_
- This aqueous solution was then added dropwise to the oil phase while further mixing on the vortex mixer so that an emulsion formed.
- the enzyme was removed from the reaction mixture by precipitation with the same volume of ice-cold acetone followed by filtration.
- the enzyme solution was dosed during 0.5 h to 400 ml acetone (-20°C to 0°C). Stirring was continued for 1 hour at 0 0 C and the resulting enzyme slurry was filtered over a pre-coated dicalite filter.
- the acetone in the clear filtered solution was removed via evaporation under vacuum at 40 0 C.
- Step 3 Dehydration of 4-hvdroxy-6-ethyl-tetrahvdro-pyran-2-one to 6-ethyl-5,6-dihydro- pyran-2-one
- 6-ethyl-5,6-dihydro-pyran-2-one (300MHz,CDCI 3 ): ⁇ 6.85 (1 H,m), 5.96 (1 H,m), 4.30 (1 H,m), 2.3-1.6 (4H,m), 0.98 (3H,t).
- Step 4 Hydrogenation of 6-ethyl-5,6-dihvdro-pyran-2-one to 6-ethyl-3,4,5,6-tetrahydro- pyran-2-one
- the distilled 6-ethyl-5,6-dihydro-pyran-2-one (23.4 g) was dissolved in 120 ml toluene. 1.95 g 5% Pd/C (Degussa E196, 50% H 2 O) was added. The mixture was hydrogenated during 5 hours at 30 0 C and 10 bar H 2 .
- 6-methyl-3,4,5,6-tetrahydro-pyran-2-one (300MHz,CDCI 3 ): ⁇ 4.35 (1 H,m), 2.3- 2.6 (2H,m), 1.4-1.9 (6H,m), 1.31 (3H,d).
- 6-ethyl-3,4,5,6-tetrahydro-pyran-2-one (300MHz,CDCI 3 ): ⁇ 4.15 (1 H,m), 2.3-2.6
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| WO2015126936A1 (en) | 2014-02-19 | 2015-08-27 | P2 Science, Inc. | Substituted delta-lactones and methods of preparing same |
| US9540307B2 (en) * | 2014-05-08 | 2017-01-10 | Jiva Pharma, Inc. | Statins of omega-3 polyunsaturated acids for treating hypercholesterolemia |
| WO2015196019A1 (en) | 2014-06-20 | 2015-12-23 | P2 Science, Inc. | Film ozonolysis in a tubular or multitubular reactor |
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|---|---|---|---|---|
| US5795749A (en) * | 1995-04-05 | 1998-08-18 | The Scripps Research Institution | Use of 2-deoxyribose-5-phosphate aldolase to prepare 2-deoxyfucose, analogues and derivatives |
| JP2005520510A (en) * | 2002-03-14 | 2005-07-14 | ザ スクリプス リサーチ インスティチュート | Synthesis of synthons for the production of bioactive compounds. |
| US7402710B2 (en) * | 2004-03-29 | 2008-07-22 | Mitsui Chemicals, Inc. | Process for producing chiral hydroxyaldehyde compounds |
-
2006
- 2006-12-15 WO PCT/EP2006/012141 patent/WO2007068498A1/en not_active Ceased
- 2006-12-15 EP EP06829671A patent/EP1969131A1/en not_active Withdrawn
Non-Patent Citations (1)
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| See references of WO2007068498A1 * |
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| WO2007068498A1 (en) | 2007-06-21 |
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