EP1214428A1 - Procede de fabrication de serine-proteases actives et de variants inactifs - Google Patents
Procede de fabrication de serine-proteases actives et de variants inactifsInfo
- Publication number
- EP1214428A1 EP1214428A1 EP00964151A EP00964151A EP1214428A1 EP 1214428 A1 EP1214428 A1 EP 1214428A1 EP 00964151 A EP00964151 A EP 00964151A EP 00964151 A EP00964151 A EP 00964151A EP 1214428 A1 EP1214428 A1 EP 1214428A1
- Authority
- EP
- European Patent Office
- Prior art keywords
- serine protease
- gzmk
- sequence
- dipeptide
- granzyme
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
- 102000012479 Serine Proteases Human genes 0.000 title claims abstract description 101
- 108010022999 Serine Proteases Proteins 0.000 title claims abstract description 101
- 238000004519 manufacturing process Methods 0.000 title claims abstract description 11
- 238000000034 method Methods 0.000 claims abstract description 57
- 108010016626 Dipeptides Proteins 0.000 claims abstract description 34
- 102000018389 Exopeptidases Human genes 0.000 claims abstract description 22
- 108010091443 Exopeptidases Proteins 0.000 claims abstract description 22
- 150000001413 amino acids Chemical class 0.000 claims abstract description 21
- 239000012634 fragment Substances 0.000 claims abstract description 15
- 102000001398 Granzyme Human genes 0.000 claims description 192
- 108060005986 Granzyme Proteins 0.000 claims description 189
- 108090000267 Cathepsin C Proteins 0.000 claims description 40
- 102000003902 Cathepsin C Human genes 0.000 claims description 40
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 claims description 20
- 238000002360 preparation method Methods 0.000 claims description 17
- 102000007056 Recombinant Fusion Proteins Human genes 0.000 claims description 14
- 108010008281 Recombinant Fusion Proteins Proteins 0.000 claims description 14
- 230000008569 process Effects 0.000 claims description 14
- ONIBWKKTOPOVIA-UHFFFAOYSA-N Proline Natural products OC(=O)C1CCCN1 ONIBWKKTOPOVIA-UHFFFAOYSA-N 0.000 claims description 10
- 239000002773 nucleotide Substances 0.000 claims description 10
- 125000003729 nucleotide group Chemical group 0.000 claims description 10
- 230000003197 catalytic effect Effects 0.000 claims description 8
- -1 proteinase-3 Proteins 0.000 claims description 8
- 108010028275 Leukocyte Elastase Proteins 0.000 claims description 6
- 230000008859 change Effects 0.000 claims description 6
- LKDMKWNDBAVNQZ-UHFFFAOYSA-N 4-[[1-[[1-[2-[[1-(4-nitroanilino)-1-oxo-3-phenylpropan-2-yl]carbamoyl]pyrrolidin-1-yl]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-oxobutanoic acid Chemical compound OC(=O)CCC(=O)NC(C)C(=O)NC(C)C(=O)N1CCCC1C(=O)NC(C(=O)NC=1C=CC(=CC=1)[N+]([O-])=O)CC1=CC=CC=C1 LKDMKWNDBAVNQZ-UHFFFAOYSA-N 0.000 claims description 5
- 108090000617 Cathepsin G Proteins 0.000 claims description 5
- 102100025975 Cathepsin G Human genes 0.000 claims description 5
- 108050003624 Granzyme M Proteins 0.000 claims description 5
- 102100033174 Neutrophil elastase Human genes 0.000 claims description 5
- 102000003706 Complement factor D Human genes 0.000 claims description 3
- 108090000059 Complement factor D Proteins 0.000 claims description 3
- 102000005600 Cathepsins Human genes 0.000 claims description 2
- 108010084457 Cathepsins Proteins 0.000 claims description 2
- 101000909992 Papio hamadryas Chymase Proteins 0.000 claims description 2
- 108060005989 Tryptase Proteins 0.000 claims description 2
- 102000001400 Tryptase Human genes 0.000 claims description 2
- 108700028369 Alleles Proteins 0.000 claims 1
- 229930195722 L-methionine Natural products 0.000 claims 1
- 210000004899 c-terminal region Anatomy 0.000 claims 1
- 108020001778 catalytic domains Proteins 0.000 claims 1
- 108090000623 proteins and genes Proteins 0.000 abstract description 53
- 102000004169 proteins and genes Human genes 0.000 abstract description 51
- 230000014509 gene expression Effects 0.000 abstract description 41
- 210000003000 inclusion body Anatomy 0.000 abstract description 30
- 238000004153 renaturation Methods 0.000 abstract description 14
- 230000004913 activation Effects 0.000 abstract description 11
- 101000930822 Giardia intestinalis Dipeptidyl-peptidase 4 Proteins 0.000 abstract description 7
- 230000015556 catabolic process Effects 0.000 abstract description 7
- 238000006731 degradation reaction Methods 0.000 abstract description 7
- 210000002381 plasma Anatomy 0.000 description 56
- 101800001691 Inter-alpha-trypsin inhibitor light chain Proteins 0.000 description 48
- 102400001240 Inter-alpha-trypsin inhibitor light chain Human genes 0.000 description 48
- 239000003112 inhibitor Substances 0.000 description 48
- 235000018102 proteins Nutrition 0.000 description 46
- 230000000694 effects Effects 0.000 description 43
- 229940088598 enzyme Drugs 0.000 description 32
- 239000000758 substrate Substances 0.000 description 31
- 102000004411 Antithrombin III Human genes 0.000 description 30
- 108090000935 Antithrombin III Proteins 0.000 description 30
- 102000004190 Enzymes Human genes 0.000 description 30
- 108090000790 Enzymes Proteins 0.000 description 30
- 229960005348 antithrombin iii Drugs 0.000 description 30
- 235000006109 methionine Nutrition 0.000 description 30
- 241000588724 Escherichia coli Species 0.000 description 27
- 238000006243 chemical reaction Methods 0.000 description 27
- 229930182817 methionine Natural products 0.000 description 25
- 210000004027 cell Anatomy 0.000 description 23
- 239000000872 buffer Substances 0.000 description 21
- 102000035195 Peptidases Human genes 0.000 description 20
- 108091005804 Peptidases Proteins 0.000 description 20
- 238000003752 polymerase chain reaction Methods 0.000 description 20
- 125000001360 methionine group Chemical group N[C@@H](CCSC)C(=O)* 0.000 description 19
- 108091034117 Oligonucleotide Proteins 0.000 description 18
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 18
- FIWAQJRIROPAEC-IBGZPJMESA-N thiobenzyl benzyloxycarbonyl-L-lysinate Chemical compound N([C@@H](CCCCN)C(=O)SCC=1C=CC=CC=1)C(=O)OCC1=CC=CC=C1 FIWAQJRIROPAEC-IBGZPJMESA-N 0.000 description 18
- 239000004365 Protease Substances 0.000 description 17
- 230000005764 inhibitory process Effects 0.000 description 17
- 108010056582 methionylglutamic acid Proteins 0.000 description 17
- 238000012360 testing method Methods 0.000 description 17
- 108020004414 DNA Proteins 0.000 description 16
- 101710181812 Methionine aminopeptidase Proteins 0.000 description 16
- 239000000047 product Substances 0.000 description 16
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 15
- 235000001014 amino acid Nutrition 0.000 description 15
- 239000000203 mixture Substances 0.000 description 15
- 239000002953 phosphate buffered saline Substances 0.000 description 15
- 101000900697 Homo sapiens Granzyme M Proteins 0.000 description 14
- 229940024606 amino acid Drugs 0.000 description 14
- 239000002299 complementary DNA Substances 0.000 description 14
- 102000044296 human GZMM Human genes 0.000 description 14
- 239000013598 vector Substances 0.000 description 14
- 101001033007 Homo sapiens Granzyme K Proteins 0.000 description 13
- ADHNYKZHPOEULM-BQBZGAKWSA-N Met-Glu Chemical compound CSCC[C@H](N)C(=O)N[C@H](C(O)=O)CCC(O)=O ADHNYKZHPOEULM-BQBZGAKWSA-N 0.000 description 13
- 230000015572 biosynthetic process Effects 0.000 description 13
- 125000004122 cyclic group Chemical group 0.000 description 13
- 239000002243 precursor Substances 0.000 description 13
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 13
- 238000003776 cleavage reaction Methods 0.000 description 12
- 230000029087 digestion Effects 0.000 description 12
- 150000002148 esters Chemical class 0.000 description 12
- 230000007017 scission Effects 0.000 description 12
- KZSNJWFQEVHDMF-UHFFFAOYSA-N Valine Chemical compound CC(C)C(N)C(O)=O KZSNJWFQEVHDMF-UHFFFAOYSA-N 0.000 description 11
- 230000002255 enzymatic effect Effects 0.000 description 11
- 102000046077 human GZMK Human genes 0.000 description 11
- 230000002401 inhibitory effect Effects 0.000 description 11
- 238000012545 processing Methods 0.000 description 11
- 108020004705 Codon Proteins 0.000 description 10
- 238000011534 incubation Methods 0.000 description 10
- YCUSPBPZVJDMII-YUMQZZPRSA-N Met-Gly-Glu Chemical compound CSCC[C@H](N)C(=O)NCC(=O)N[C@H](C(O)=O)CCC(O)=O YCUSPBPZVJDMII-YUMQZZPRSA-N 0.000 description 9
- 230000001580 bacterial effect Effects 0.000 description 9
- 238000000338 in vitro Methods 0.000 description 9
- 239000011780 sodium chloride Substances 0.000 description 9
- 241000894006 Bacteria Species 0.000 description 8
- 108010062466 Enzyme Precursors Proteins 0.000 description 8
- 102000010911 Enzyme Precursors Human genes 0.000 description 8
- 238000002474 experimental method Methods 0.000 description 8
- 210000004698 lymphocyte Anatomy 0.000 description 8
- 238000012163 sequencing technique Methods 0.000 description 8
- 239000004475 Arginine Substances 0.000 description 7
- KDXKERNSBIXSRK-YFKPBYRVSA-N L-lysine Chemical compound NCCCC[C@H](N)C(O)=O KDXKERNSBIXSRK-YFKPBYRVSA-N 0.000 description 7
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 description 7
- 108010076504 Protein Sorting Signals Proteins 0.000 description 7
- 108090000631 Trypsin Proteins 0.000 description 7
- 102000004142 Trypsin Human genes 0.000 description 7
- 238000004458 analytical method Methods 0.000 description 7
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 description 7
- 235000009697 arginine Nutrition 0.000 description 7
- 238000000502 dialysis Methods 0.000 description 7
- 239000012588 trypsin Substances 0.000 description 7
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 6
- 108010039627 Aprotinin Proteins 0.000 description 6
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 6
- HTTJABKRGRZYRN-UHFFFAOYSA-N Heparin Chemical compound OC1C(NC(=O)C)C(O)OC(COS(O)(=O)=O)C1OC1C(OS(O)(=O)=O)C(O)C(OC2C(C(OS(O)(=O)=O)C(OC3C(C(O)C(O)C(O3)C(O)=O)OS(O)(=O)=O)C(CO)O2)NS(O)(=O)=O)C(C(O)=O)O1 HTTJABKRGRZYRN-UHFFFAOYSA-N 0.000 description 6
- ONIBWKKTOPOVIA-BYPYZUCNSA-N L-Proline Chemical compound OC(=O)[C@@H]1CCCN1 ONIBWKKTOPOVIA-BYPYZUCNSA-N 0.000 description 6
- KZSNJWFQEVHDMF-BYPYZUCNSA-N L-valine Chemical compound CC(C)[C@H](N)C(O)=O KZSNJWFQEVHDMF-BYPYZUCNSA-N 0.000 description 6
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 6
- 239000007983 Tris buffer Substances 0.000 description 6
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 description 6
- 229960004405 aprotinin Drugs 0.000 description 6
- 238000005119 centrifugation Methods 0.000 description 6
- 238000010367 cloning Methods 0.000 description 6
- 239000000499 gel Substances 0.000 description 6
- 229960002897 heparin Drugs 0.000 description 6
- 229920000669 heparin Polymers 0.000 description 6
- ZPNFWUPYTFPOJU-LPYSRVMUSA-N iniprol Chemical compound C([C@H]1C(=O)NCC(=O)NCC(=O)N[C@H]2CSSC[C@H]3C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@H](C(N[C@H](C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CC=4C=CC(O)=CC=4)C(=O)N[C@@H](CC=4C=CC=CC=4)C(=O)N[C@@H](CC=4C=CC(O)=CC=4)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CCCCN)C(=O)N[C@@H](C)C(=O)NCC(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CCC(O)=O)NC(=O)[C@H](C)NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CC=4C=CC=CC=4)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CCCNC(N)=N)NC(=O)[C@H](CCCCN)NC(=O)[C@H](C)NC(=O)[C@H](CCCNC(N)=N)NC2=O)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CSSC[C@H](NC(=O)[C@H](CC=2C=CC=CC=2)NC(=O)[C@H](CC(O)=O)NC(=O)[C@H]2N(CCC2)C(=O)[C@@H](N)CCCNC(N)=N)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(O)=O)C(=O)N2[C@@H](CCC2)C(=O)N2[C@@H](CCC2)C(=O)N[C@@H](CC=2C=CC(O)=CC=2)C(=O)N[C@@H]([C@@H](C)O)C(=O)NCC(=O)N2[C@@H](CCC2)C(=O)N3)C(=O)NCC(=O)NCC(=O)N[C@@H](C)C(O)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](C(=O)N[C@@H](CC=2C=CC=CC=2)C(=O)N[C@H](C(=O)N1)C(C)C)[C@@H](C)O)[C@@H](C)CC)=O)[C@@H](C)CC)C1=CC=C(O)C=C1 ZPNFWUPYTFPOJU-LPYSRVMUSA-N 0.000 description 6
- BPHPUYQFMNQIOC-NXRLNHOXSA-N isopropyl beta-D-thiogalactopyranoside Chemical compound CC(C)S[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O BPHPUYQFMNQIOC-NXRLNHOXSA-N 0.000 description 6
- 108090000765 processed proteins & peptides Proteins 0.000 description 6
- 238000004448 titration Methods 0.000 description 6
- LENZDBCJOHFCAS-UHFFFAOYSA-N tris Chemical compound OCC(N)(CO)CO LENZDBCJOHFCAS-UHFFFAOYSA-N 0.000 description 6
- 239000004474 valine Substances 0.000 description 6
- 239000011534 wash buffer Substances 0.000 description 6
- 235000014469 Bacillus subtilis Nutrition 0.000 description 5
- 108090000317 Chymotrypsin Proteins 0.000 description 5
- 125000003275 alpha amino acid group Chemical group 0.000 description 5
- 210000001185 bone marrow Anatomy 0.000 description 5
- 229960002376 chymotrypsin Drugs 0.000 description 5
- 238000004925 denaturation Methods 0.000 description 5
- 230000036425 denaturation Effects 0.000 description 5
- 230000006870 function Effects 0.000 description 5
- 239000008187 granular material Substances 0.000 description 5
- 239000006166 lysate Substances 0.000 description 5
- 210000000822 natural killer cell Anatomy 0.000 description 5
- YBYRMVIVWMBXKQ-UHFFFAOYSA-N phenylmethanesulfonyl fluoride Chemical compound FS(=O)(=O)CC1=CC=CC=C1 YBYRMVIVWMBXKQ-UHFFFAOYSA-N 0.000 description 5
- 229940012957 plasmin Drugs 0.000 description 5
- 235000019419 proteases Nutrition 0.000 description 5
- 108091008146 restriction endonucleases Proteins 0.000 description 5
- 238000002415 sodium dodecyl sulfate polyacrylamide gel electrophoresis Methods 0.000 description 5
- 101000793930 Bos taurus Dipeptidyl peptidase 1 Proteins 0.000 description 4
- 108090000371 Esterases Proteins 0.000 description 4
- AGPKZVBTJJNPAG-WHFBIAKZSA-N L-isoleucine Chemical compound CC[C@H](C)[C@H](N)C(O)=O AGPKZVBTJJNPAG-WHFBIAKZSA-N 0.000 description 4
- 108010067372 Pancreatic elastase Proteins 0.000 description 4
- 102000016387 Pancreatic elastase Human genes 0.000 description 4
- PXIPVTKHYLBLMZ-UHFFFAOYSA-N Sodium azide Chemical compound [Na+].[N-]=[N+]=[N-] PXIPVTKHYLBLMZ-UHFFFAOYSA-N 0.000 description 4
- 210000001744 T-lymphocyte Anatomy 0.000 description 4
- 229920004890 Triton X-100 Polymers 0.000 description 4
- 239000013504 Triton X-100 Substances 0.000 description 4
- 230000001086 cytosolic effect Effects 0.000 description 4
- 238000010790 dilution Methods 0.000 description 4
- 239000012895 dilution Substances 0.000 description 4
- 238000010494 dissociation reaction Methods 0.000 description 4
- 230000005593 dissociations Effects 0.000 description 4
- 102000037865 fusion proteins Human genes 0.000 description 4
- 108020001507 fusion proteins Proteins 0.000 description 4
- PJJJBBJSCAKJQF-UHFFFAOYSA-N guanidinium chloride Chemical compound [Cl-].NC(N)=[NH2+] PJJJBBJSCAKJQF-UHFFFAOYSA-N 0.000 description 4
- 108010093564 inter-alpha-inhibitor Proteins 0.000 description 4
- 229960000310 isoleucine Drugs 0.000 description 4
- AGPKZVBTJJNPAG-UHFFFAOYSA-N isoleucine Natural products CCC(C)C(N)C(O)=O AGPKZVBTJJNPAG-UHFFFAOYSA-N 0.000 description 4
- 229960000318 kanamycin Drugs 0.000 description 4
- 238000000746 purification Methods 0.000 description 4
- 230000028327 secretion Effects 0.000 description 4
- 239000000243 solution Substances 0.000 description 4
- MTCFGRXMJLQNBG-REOHCLBHSA-N (2S)-2-Amino-3-hydroxypropansäure Chemical compound OC[C@H](N)C(O)=O MTCFGRXMJLQNBG-REOHCLBHSA-N 0.000 description 3
- CFOQGBUQTOGYKI-UHFFFAOYSA-N (4-nitrophenyl) 4-(diaminomethylideneamino)benzoate Chemical compound C1=CC(N=C(N)N)=CC=C1C(=O)OC1=CC=C([N+]([O-])=O)C=C1 CFOQGBUQTOGYKI-UHFFFAOYSA-N 0.000 description 3
- KIUMMUBSPKGMOY-UHFFFAOYSA-N 3,3'-Dithiobis(6-nitrobenzoic acid) Chemical compound C1=C([N+]([O-])=O)C(C(=O)O)=CC(SSC=2C=C(C(=CC=2)[N+]([O-])=O)C(O)=O)=C1 KIUMMUBSPKGMOY-UHFFFAOYSA-N 0.000 description 3
- QTBSBXVTEAMEQO-UHFFFAOYSA-M Acetate Chemical compound CC([O-])=O QTBSBXVTEAMEQO-UHFFFAOYSA-M 0.000 description 3
- 241000193830 Bacillus <bacterium> Species 0.000 description 3
- 244000063299 Bacillus subtilis Species 0.000 description 3
- 102000004506 Blood Proteins Human genes 0.000 description 3
- 108010017384 Blood Proteins Proteins 0.000 description 3
- 241000283690 Bos taurus Species 0.000 description 3
- 101001009599 Homo sapiens Granzyme A Proteins 0.000 description 3
- ODKSFYDXXFIFQN-BYPYZUCNSA-N L-arginine Chemical compound OC(=O)[C@@H](N)CCCN=C(N)N ODKSFYDXXFIFQN-BYPYZUCNSA-N 0.000 description 3
- ODKSFYDXXFIFQN-BYPYZUCNSA-P L-argininium(2+) Chemical compound NC(=[NH2+])NCCC[C@H]([NH3+])C(O)=O ODKSFYDXXFIFQN-BYPYZUCNSA-P 0.000 description 3
- WHUUTDBJXJRKMK-VKHMYHEASA-N L-glutamic acid Chemical compound OC(=O)[C@@H](N)CCC(O)=O WHUUTDBJXJRKMK-VKHMYHEASA-N 0.000 description 3
- 125000002061 L-isoleucyl group Chemical group [H]N([H])[C@]([H])(C(=O)[*])[C@](C([H])([H])[H])([H])C(C([H])([H])[H])([H])[H] 0.000 description 3
- 239000006391 Luria-Bertani Medium Substances 0.000 description 3
- 239000004472 Lysine Substances 0.000 description 3
- 101001033006 Mus musculus Granzyme K Proteins 0.000 description 3
- 108010002311 N-glycylglutamic acid Proteins 0.000 description 3
- MQUQNUAYKLCRME-INIZCTEOSA-N N-tosyl-L-phenylalanyl chloromethyl ketone Chemical compound C1=CC(C)=CC=C1S(=O)(=O)N[C@H](C(=O)CCl)CC1=CC=CC=C1 MQUQNUAYKLCRME-INIZCTEOSA-N 0.000 description 3
- 108091028043 Nucleic acid sequence Proteins 0.000 description 3
- 108090000113 Plasma Kallikrein Proteins 0.000 description 3
- 102100034869 Plasma kallikrein Human genes 0.000 description 3
- 235000004279 alanine Nutrition 0.000 description 3
- 125000003295 alanine group Chemical group N[C@@H](C)C(=O)* 0.000 description 3
- 125000000539 amino acid group Chemical group 0.000 description 3
- 239000006227 byproduct Substances 0.000 description 3
- 238000005277 cation exchange chromatography Methods 0.000 description 3
- 239000013592 cell lysate Substances 0.000 description 3
- 238000012512 characterization method Methods 0.000 description 3
- 230000015271 coagulation Effects 0.000 description 3
- 238000005345 coagulation Methods 0.000 description 3
- 230000004154 complement system Effects 0.000 description 3
- 238000010276 construction Methods 0.000 description 3
- 210000000172 cytosol Anatomy 0.000 description 3
- 230000006378 damage Effects 0.000 description 3
- 230000007423 decrease Effects 0.000 description 3
- 230000000058 esterolytic effect Effects 0.000 description 3
- 239000013604 expression vector Substances 0.000 description 3
- 238000013467 fragmentation Methods 0.000 description 3
- 238000006062 fragmentation reaction Methods 0.000 description 3
- 230000007062 hydrolysis Effects 0.000 description 3
- 238000006460 hydrolysis reaction Methods 0.000 description 3
- 230000007124 immune defense Effects 0.000 description 3
- 238000001727 in vivo Methods 0.000 description 3
- 238000004255 ion exchange chromatography Methods 0.000 description 3
- 108020004999 messenger RNA Proteins 0.000 description 3
- 238000005457 optimization Methods 0.000 description 3
- 230000003132 peptidolytic effect Effects 0.000 description 3
- 102000004196 processed proteins & peptides Human genes 0.000 description 3
- 235000019833 protease Nutrition 0.000 description 3
- 239000012460 protein solution Substances 0.000 description 3
- 238000011160 research Methods 0.000 description 3
- 239000007858 starting material Substances 0.000 description 3
- 210000001519 tissue Anatomy 0.000 description 3
- 238000013518 transcription Methods 0.000 description 3
- 230000035897 transcription Effects 0.000 description 3
- 238000013519 translation Methods 0.000 description 3
- KWPACVJPAFGBEQ-IKGGRYGDSA-N (2s)-1-[(2r)-2-amino-3-phenylpropanoyl]-n-[(3s)-1-chloro-6-(diaminomethylideneamino)-2-oxohexan-3-yl]pyrrolidine-2-carboxamide Chemical compound C([C@@H](N)C(=O)N1[C@@H](CCC1)C(=O)N[C@@H](CCCNC(N)=N)C(=O)CCl)C1=CC=CC=C1 KWPACVJPAFGBEQ-IKGGRYGDSA-N 0.000 description 2
- CIEMDIKTFOLQML-UHFFFAOYSA-N 2-amino-1-sulfanylethanol Chemical compound NCC(O)S CIEMDIKTFOLQML-UHFFFAOYSA-N 0.000 description 2
- 108010077805 Bacterial Proteins Proteins 0.000 description 2
- 108091033380 Coding strand Proteins 0.000 description 2
- 108010054576 Deoxyribonuclease EcoRI Proteins 0.000 description 2
- 238000002965 ELISA Methods 0.000 description 2
- 102100031780 Endonuclease Human genes 0.000 description 2
- 241000588722 Escherichia Species 0.000 description 2
- 241000206602 Eukaryota Species 0.000 description 2
- 108010074860 Factor Xa Proteins 0.000 description 2
- 108010053070 Glutathione Disulfide Proteins 0.000 description 2
- 239000004471 Glycine Substances 0.000 description 2
- 102100030385 Granzyme B Human genes 0.000 description 2
- 102100038395 Granzyme K Human genes 0.000 description 2
- 241000238631 Hexapoda Species 0.000 description 2
- 101001009603 Homo sapiens Granzyme B Proteins 0.000 description 2
- 206010061218 Inflammation Diseases 0.000 description 2
- 241000235058 Komagataella pastoris Species 0.000 description 2
- TWRXJAOTZQYOKJ-UHFFFAOYSA-L Magnesium chloride Chemical compound [Mg+2].[Cl-].[Cl-] TWRXJAOTZQYOKJ-UHFFFAOYSA-L 0.000 description 2
- UASDAHIAHBRZQV-YUMQZZPRSA-N Met-Arg Chemical compound CSCC[C@H](N)C(=O)N[C@H](C(O)=O)CCCNC(N)=N UASDAHIAHBRZQV-YUMQZZPRSA-N 0.000 description 2
- PESQCPHRXOFIPX-RYUDHWBXSA-N Met-Tyr Chemical compound CSCC[C@H](N)C(=O)N[C@H](C(O)=O)CC1=CC=C(O)C=C1 PESQCPHRXOFIPX-RYUDHWBXSA-N 0.000 description 2
- BAVYZALUXZFZLV-UHFFFAOYSA-N Methylamine Chemical compound NC BAVYZALUXZFZLV-UHFFFAOYSA-N 0.000 description 2
- 102000016943 Muramidase Human genes 0.000 description 2
- 108010014251 Muramidase Proteins 0.000 description 2
- 108010062010 N-Acetylmuramoyl-L-alanine Amidase Proteins 0.000 description 2
- PESQCPHRXOFIPX-UHFFFAOYSA-N N-L-methionyl-L-tyrosine Natural products CSCCC(N)C(=O)NC(C(O)=O)CC1=CC=C(O)C=C1 PESQCPHRXOFIPX-UHFFFAOYSA-N 0.000 description 2
- 241000283973 Oryctolagus cuniculus Species 0.000 description 2
- KHGNFPUMBJSZSM-UHFFFAOYSA-N Perforine Natural products COC1=C2CCC(O)C(CCC(C)(C)O)(OC)C2=NC2=C1C=CO2 KHGNFPUMBJSZSM-UHFFFAOYSA-N 0.000 description 2
- 108010092799 RNA-directed DNA polymerase Proteins 0.000 description 2
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 2
- 229920002684 Sepharose Polymers 0.000 description 2
- MTCFGRXMJLQNBG-UHFFFAOYSA-N Serine Natural products OCC(N)C(O)=O MTCFGRXMJLQNBG-UHFFFAOYSA-N 0.000 description 2
- 108091081024 Start codon Proteins 0.000 description 2
- 102100029637 Tryptase beta-2 Human genes 0.000 description 2
- 101710134953 Tryptase beta-2 Proteins 0.000 description 2
- 101710186357 Tryptase-2 Proteins 0.000 description 2
- 230000009102 absorption Effects 0.000 description 2
- 238000010521 absorption reaction Methods 0.000 description 2
- 230000003213 activating effect Effects 0.000 description 2
- 238000013019 agitation Methods 0.000 description 2
- 230000000844 anti-bacterial effect Effects 0.000 description 2
- 230000001363 autoimmune Effects 0.000 description 2
- 229940125717 barbiturate Drugs 0.000 description 2
- PXXJHWLDUBFPOL-UHFFFAOYSA-N benzamidine Chemical compound NC(=N)C1=CC=CC=C1 PXXJHWLDUBFPOL-UHFFFAOYSA-N 0.000 description 2
- 239000007853 buffer solution Substances 0.000 description 2
- 230000001413 cellular effect Effects 0.000 description 2
- 208000037976 chronic inflammation Diseases 0.000 description 2
- 208000037893 chronic inflammatory disorder Diseases 0.000 description 2
- 238000004140 cleaning Methods 0.000 description 2
- 230000000295 complement effect Effects 0.000 description 2
- 238000011109 contamination Methods 0.000 description 2
- 210000000805 cytoplasm Anatomy 0.000 description 2
- 210000001151 cytotoxic T lymphocyte Anatomy 0.000 description 2
- 230000001419 dependent effect Effects 0.000 description 2
- 210000001035 gastrointestinal tract Anatomy 0.000 description 2
- 230000002068 genetic effect Effects 0.000 description 2
- 229930195712 glutamate Natural products 0.000 description 2
- YPZRWBKMTBYPTK-BJDJZHNGSA-N glutathione disulfide Chemical compound OC(=O)[C@@H](N)CCC(=O)N[C@H](C(=O)NCC(O)=O)CSSC[C@@H](C(=O)NCC(O)=O)NC(=O)CC[C@H](N)C(O)=O YPZRWBKMTBYPTK-BJDJZHNGSA-N 0.000 description 2
- 210000003714 granulocyte Anatomy 0.000 description 2
- 210000003630 histaminocyte Anatomy 0.000 description 2
- 210000000987 immune system Anatomy 0.000 description 2
- 230000000951 immunodiffusion Effects 0.000 description 2
- 230000002779 inactivation Effects 0.000 description 2
- 230000006698 induction Effects 0.000 description 2
- 230000004054 inflammatory process Effects 0.000 description 2
- 230000000977 initiatory effect Effects 0.000 description 2
- 238000003780 insertion Methods 0.000 description 2
- 230000037431 insertion Effects 0.000 description 2
- 230000003993 interaction Effects 0.000 description 2
- 229930027917 kanamycin Natural products 0.000 description 2
- SBUJHOSQTJFQJX-NOAMYHISSA-N kanamycin Chemical compound O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CN)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O[C@@H]2[C@@H]([C@@H](N)[C@H](O)[C@@H](CO)O2)O)[C@H](N)C[C@@H]1N SBUJHOSQTJFQJX-NOAMYHISSA-N 0.000 description 2
- 229930182823 kanamycin A Natural products 0.000 description 2
- 239000007791 liquid phase Substances 0.000 description 2
- 210000003810 lymphokine-activated killer cell Anatomy 0.000 description 2
- 239000012139 lysis buffer Substances 0.000 description 2
- 229960000274 lysozyme Drugs 0.000 description 2
- 239000004325 lysozyme Substances 0.000 description 2
- 235000010335 lysozyme Nutrition 0.000 description 2
- 210000004962 mammalian cell Anatomy 0.000 description 2
- 238000005259 measurement Methods 0.000 description 2
- 230000001404 mediated effect Effects 0.000 description 2
- 239000012528 membrane Substances 0.000 description 2
- 238000002703 mutagenesis Methods 0.000 description 2
- 231100000350 mutagenesis Toxicity 0.000 description 2
- YFCUZWYIPBUQBD-ZOWNYOTGSA-N n-[(3s)-7-amino-1-chloro-2-oxoheptan-3-yl]-4-methylbenzenesulfonamide;hydron;chloride Chemical compound Cl.CC1=CC=C(S(=O)(=O)N[C@@H](CCCCN)C(=O)CCl)C=C1 YFCUZWYIPBUQBD-ZOWNYOTGSA-N 0.000 description 2
- 210000000496 pancreas Anatomy 0.000 description 2
- 239000008188 pellet Substances 0.000 description 2
- 239000000137 peptide hydrolase inhibitor Substances 0.000 description 2
- 229930192851 perforin Natural products 0.000 description 2
- 210000001322 periplasm Anatomy 0.000 description 2
- 239000013612 plasmid Substances 0.000 description 2
- 229920001184 polypeptide Polymers 0.000 description 2
- 210000001236 prokaryotic cell Anatomy 0.000 description 2
- 238000000734 protein sequencing Methods 0.000 description 2
- 230000017854 proteolysis Effects 0.000 description 2
- 230000001105 regulatory effect Effects 0.000 description 2
- 230000002441 reversible effect Effects 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 210000002966 serum Anatomy 0.000 description 2
- 239000011734 sodium Substances 0.000 description 2
- 238000005063 solubilization Methods 0.000 description 2
- 230000007928 solubilization Effects 0.000 description 2
- 239000011537 solubilization buffer Substances 0.000 description 2
- 238000010186 staining Methods 0.000 description 2
- 238000010561 standard procedure Methods 0.000 description 2
- 238000003860 storage Methods 0.000 description 2
- 238000006467 substitution reaction Methods 0.000 description 2
- 150000003573 thiols Chemical class 0.000 description 2
- 230000001810 trypsinlike Effects 0.000 description 2
- 210000004881 tumor cell Anatomy 0.000 description 2
- DGVVWUTYPXICAM-UHFFFAOYSA-N β‐Mercaptoethanol Chemical compound OCCS DGVVWUTYPXICAM-UHFFFAOYSA-N 0.000 description 2
- PGOHTUIFYSHAQG-LJSDBVFPSA-N (2S)-6-amino-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-1-[(2S,3R)-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-2-[[(2S)-2-[[2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-1-[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-4-methylsulfanylbutanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-5-carbamimidamidopentanoyl]amino]propanoyl]pyrrolidine-2-carbonyl]amino]-3-methylbutanoyl]amino]-4-methylpentanoyl]amino]-4-methylpentanoyl]amino]acetyl]amino]-3-hydroxypropanoyl]amino]-4-methylpentanoyl]amino]-3-sulfanylpropanoyl]amino]-4-methylsulfanylbutanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-hydroxybutanoyl]pyrrolidine-2-carbonyl]amino]-5-oxopentanoyl]amino]-3-hydroxypropanoyl]amino]-3-hydroxypropanoyl]amino]-3-(1H-imidazol-5-yl)propanoyl]amino]-4-methylpentanoyl]amino]-3-hydroxybutanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-5-carbamimidamidopentanoyl]amino]-5-oxopentanoyl]amino]-3-hydroxybutanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]amino]-3-hydroxypropanoyl]amino]-5-oxopentanoyl]amino]-5-oxopentanoyl]amino]-3-phenylpropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-methylbutanoyl]amino]-4-methylpentanoyl]amino]-4-oxobutanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-4-carboxybutanoyl]amino]-5-oxopentanoyl]amino]hexanoic acid Chemical compound CSCC[C@H](N)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C)C(=O)N1CCC[C@H]1C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(C)C)C(=O)NCC(=O)N[C@@H](CO)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CS)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H]([C@@H](C)O)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CO)C(=O)N[C@@H](Cc1cnc[nH]1)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCCNC(N)=N)C(=O)N[C@@H](Cc1c[nH]c2ccccc12)C(=O)N[C@@H](CCC(O)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCCN)C(O)=O PGOHTUIFYSHAQG-LJSDBVFPSA-N 0.000 description 1
- HAUNHIKYMYYHCS-YDALLXLXSA-N (2s)-6-amino-2-[(4-methylphenyl)sulfonylamino]hexanoic acid;1,3-dichloropropan-2-one Chemical compound ClCC(=O)CCl.CC1=CC=C(S(=O)(=O)N[C@@H](CCCCN)C(O)=O)C=C1 HAUNHIKYMYYHCS-YDALLXLXSA-N 0.000 description 1
- PELFTNQHGSITLB-UHFFFAOYSA-N 1-[4-amino-7-(3-hydroxypropyl)-5-(4-methylphenyl)pyrrolo[2,3-d]pyrimidin-6-yl]-2-chloroethanone Chemical compound C1=CC(C)=CC=C1C1=C(C(=O)CCl)N(CCCO)C2=NC=NC(N)=C12 PELFTNQHGSITLB-UHFFFAOYSA-N 0.000 description 1
- PQMRRAQXKWFYQN-UHFFFAOYSA-N 1-phenyl-2-sulfanylideneimidazolidin-4-one Chemical class S=C1NC(=O)CN1C1=CC=CC=C1 PQMRRAQXKWFYQN-UHFFFAOYSA-N 0.000 description 1
- PWKSKIMOESPYIA-UHFFFAOYSA-N 2-acetamido-3-sulfanylpropanoic acid Chemical compound CC(=O)NC(CS)C(O)=O PWKSKIMOESPYIA-UHFFFAOYSA-N 0.000 description 1
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 1
- HKJKONMZMPUGHJ-UHFFFAOYSA-N 4-amino-5-hydroxy-3-[(4-nitrophenyl)diazenyl]-6-phenyldiazenylnaphthalene-2,7-disulfonic acid Chemical compound OS(=O)(=O)C1=CC2=CC(S(O)(=O)=O)=C(N=NC=3C=CC=CC=3)C(O)=C2C(N)=C1N=NC1=CC=C([N+]([O-])=O)C=C1 HKJKONMZMPUGHJ-UHFFFAOYSA-N 0.000 description 1
- WPANETAWYGDRLL-UHFFFAOYSA-N 4-aminobenzenecarboximidamide Chemical compound NC(=N)C1=CC=C(N)C=C1 WPANETAWYGDRLL-UHFFFAOYSA-N 0.000 description 1
- KIUMMUBSPKGMOY-UHFFFAOYSA-L 5-[(3-carboxylato-4-nitrophenyl)disulfanyl]-2-nitrobenzoate Chemical compound C1=C([N+]([O-])=O)C(C(=O)[O-])=CC(SSC=2C=C(C(=CC=2)[N+]([O-])=O)C([O-])=O)=C1 KIUMMUBSPKGMOY-UHFFFAOYSA-L 0.000 description 1
- 229920000936 Agarose Polymers 0.000 description 1
- 108020004774 Alkaline Phosphatase Proteins 0.000 description 1
- 102000002260 Alkaline Phosphatase Human genes 0.000 description 1
- 108700016171 Aspartate ammonia-lyases Proteins 0.000 description 1
- 101100136076 Aspergillus oryzae (strain ATCC 42149 / RIB 40) pel1 gene Proteins 0.000 description 1
- 102000015081 Blood Coagulation Factors Human genes 0.000 description 1
- 108010039209 Blood Coagulation Factors Proteins 0.000 description 1
- UXVMQQNJUSDDNG-UHFFFAOYSA-L Calcium chloride Chemical compound [Cl-].[Cl-].[Ca+2] UXVMQQNJUSDDNG-UHFFFAOYSA-L 0.000 description 1
- 102000004225 Cathepsin B Human genes 0.000 description 1
- 108090000712 Cathepsin B Proteins 0.000 description 1
- 102000011933 Cathepsin W Human genes 0.000 description 1
- 108010061112 Cathepsin W Proteins 0.000 description 1
- 108700010070 Codon Usage Proteins 0.000 description 1
- 108091035707 Consensus sequence Proteins 0.000 description 1
- 102000005927 Cysteine Proteases Human genes 0.000 description 1
- 108010005843 Cysteine Proteases Proteins 0.000 description 1
- 238000001712 DNA sequencing Methods 0.000 description 1
- 102000007260 Deoxyribonuclease I Human genes 0.000 description 1
- 108010008532 Deoxyribonuclease I Proteins 0.000 description 1
- 108010053770 Deoxyribonucleases Proteins 0.000 description 1
- 102000016911 Deoxyribonucleases Human genes 0.000 description 1
- 241000588700 Dickeya chrysanthemi Species 0.000 description 1
- 102000016942 Elastin Human genes 0.000 description 1
- 108010014258 Elastin Proteins 0.000 description 1
- 241000588698 Erwinia Species 0.000 description 1
- 241000282326 Felis catus Species 0.000 description 1
- 108091006027 G proteins Proteins 0.000 description 1
- 102000030782 GTP binding Human genes 0.000 description 1
- 108091000058 GTP-Binding Proteins 0.000 description 1
- 101710103262 Glandular kallikrein Proteins 0.000 description 1
- LLKJHSDOKTVQNQ-IUCAKERBSA-N Glu-Gly-Arg-chloromethylketone Chemical compound OC(=O)CC[C@H](N)C(=O)NCC(=O)N[C@H](C(=O)CCl)CCCNC(N)=N LLKJHSDOKTVQNQ-IUCAKERBSA-N 0.000 description 1
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 1
- IEFJWDNGDZAYNZ-BYPYZUCNSA-N Gly-Glu Chemical compound NCC(=O)N[C@H](C(O)=O)CCC(O)=O IEFJWDNGDZAYNZ-BYPYZUCNSA-N 0.000 description 1
- 206010072579 Granulomatosis with polyangiitis Diseases 0.000 description 1
- 102100022087 Granzyme M Human genes 0.000 description 1
- 101000757319 Homo sapiens Antithrombin-III Proteins 0.000 description 1
- 101001060274 Homo sapiens Fibroblast growth factor 4 Proteins 0.000 description 1
- 101001033000 Homo sapiens Granzyme H Proteins 0.000 description 1
- 101000585365 Homo sapiens Sulfotransferase 2A1 Proteins 0.000 description 1
- 102000004889 Interleukin-6 Human genes 0.000 description 1
- 108090001005 Interleukin-6 Proteins 0.000 description 1
- 108090001007 Interleukin-8 Proteins 0.000 description 1
- 102000004890 Interleukin-8 Human genes 0.000 description 1
- 102000001399 Kallikrein Human genes 0.000 description 1
- 108060005987 Kallikrein Proteins 0.000 description 1
- 102100027612 Kallikrein-11 Human genes 0.000 description 1
- 102100034870 Kallikrein-8 Human genes 0.000 description 1
- 101710176225 Kallikrein-8 Proteins 0.000 description 1
- QNAYBMKLOCPYGJ-REOHCLBHSA-N L-alanine Chemical compound C[C@H](N)C(O)=O QNAYBMKLOCPYGJ-REOHCLBHSA-N 0.000 description 1
- 229930064664 L-arginine Natural products 0.000 description 1
- 235000014852 L-arginine Nutrition 0.000 description 1
- AYFVYJQAPQTCCC-GBXIJSLDSA-N L-threonine Chemical compound C[C@@H](O)[C@H](N)C(O)=O AYFVYJQAPQTCCC-GBXIJSLDSA-N 0.000 description 1
- OUYCCCASQSFEME-QMMMGPOBSA-N L-tyrosine Chemical compound OC(=O)[C@@H](N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-QMMMGPOBSA-N 0.000 description 1
- 101710192606 Latent membrane protein 2 Proteins 0.000 description 1
- GDBQQVLCIARPGH-UHFFFAOYSA-N Leupeptin Natural products CC(C)CC(NC(C)=O)C(=O)NC(CC(C)C)C(=O)NC(C=O)CCCN=C(N)N GDBQQVLCIARPGH-UHFFFAOYSA-N 0.000 description 1
- 102000003960 Ligases Human genes 0.000 description 1
- 108090000364 Ligases Proteins 0.000 description 1
- JOYFULUKJRJCSX-IUCAKERBSA-N Met-Met-Gly Chemical compound CSCC[C@H](N)C(=O)N[C@@H](CCSC)C(=O)NCC(O)=O JOYFULUKJRJCSX-IUCAKERBSA-N 0.000 description 1
- 108010006035 Metalloproteases Proteins 0.000 description 1
- 102000005741 Metalloproteases Human genes 0.000 description 1
- 241001529936 Murinae Species 0.000 description 1
- 101001009600 Mus musculus Granzyme A Proteins 0.000 description 1
- PYUSHNKNPOHWEZ-YFKPBYRVSA-N N-formyl-L-methionine Chemical group CSCC[C@@H](C(O)=O)NC=O PYUSHNKNPOHWEZ-YFKPBYRVSA-N 0.000 description 1
- 206010028980 Neoplasm Diseases 0.000 description 1
- 108091092724 Noncoding DNA Proteins 0.000 description 1
- 108010077850 Nuclear Localization Signals Proteins 0.000 description 1
- 101710131039 Opsin-5 Proteins 0.000 description 1
- 241000588701 Pectobacterium carotovorum Species 0.000 description 1
- 241001596784 Pegasus Species 0.000 description 1
- 101000864069 Plasmodium falciparum (isolate 3D7) Dipeptidyl aminopeptidase 1 Proteins 0.000 description 1
- 229920001030 Polyethylene Glycol 4000 Polymers 0.000 description 1
- 101710192597 Protein map Proteins 0.000 description 1
- 241000607720 Serratia Species 0.000 description 1
- 241000607715 Serratia marcescens Species 0.000 description 1
- 108090000787 Subtilisin Proteins 0.000 description 1
- 101710137500 T7 RNA polymerase Proteins 0.000 description 1
- 101710109576 Terminal protein Proteins 0.000 description 1
- 102000013090 Thioredoxin-Disulfide Reductase Human genes 0.000 description 1
- 108010079911 Thioredoxin-disulfide reductase Proteins 0.000 description 1
- AYFVYJQAPQTCCC-UHFFFAOYSA-N Threonine Natural products CC(O)C(N)C(O)=O AYFVYJQAPQTCCC-UHFFFAOYSA-N 0.000 description 1
- 239000004473 Threonine Substances 0.000 description 1
- 102000003790 Thrombin receptors Human genes 0.000 description 1
- 108090000166 Thrombin receptors Proteins 0.000 description 1
- 102000057032 Tissue Kallikreins Human genes 0.000 description 1
- 229940122618 Trypsin inhibitor Drugs 0.000 description 1
- 101710162629 Trypsin inhibitor Proteins 0.000 description 1
- 101710152431 Trypsin-like protease Proteins 0.000 description 1
- 108060008682 Tumor Necrosis Factor Proteins 0.000 description 1
- 102000000852 Tumor Necrosis Factor-alpha Human genes 0.000 description 1
- 241000700605 Viruses Species 0.000 description 1
- 230000009471 action Effects 0.000 description 1
- 230000002730 additional effect Effects 0.000 description 1
- 239000011543 agarose gel Substances 0.000 description 1
- 238000003277 amino acid sequence analysis Methods 0.000 description 1
- 230000003321 amplification Effects 0.000 description 1
- 230000003042 antagnostic effect Effects 0.000 description 1
- 239000004019 antithrombin Substances 0.000 description 1
- 230000006907 apoptotic process Effects 0.000 description 1
- 238000013459 approach Methods 0.000 description 1
- CKLJMWTZIZZHCS-REOHCLBHSA-N aspartic acid group Chemical group N[C@@H](CC(=O)O)C(=O)O CKLJMWTZIZZHCS-REOHCLBHSA-N 0.000 description 1
- 238000003556 assay Methods 0.000 description 1
- 239000007982 barbital buffer Substances 0.000 description 1
- 125000001584 benzyloxycarbonyl group Chemical group C(=O)(OCC1=CC=CC=C1)* 0.000 description 1
- 238000010364 biochemical engineering Methods 0.000 description 1
- 230000008827 biological function Effects 0.000 description 1
- 238000010170 biological method Methods 0.000 description 1
- 230000031018 biological processes and functions Effects 0.000 description 1
- 230000033228 biological regulation Effects 0.000 description 1
- 238000010352 biotechnological method Methods 0.000 description 1
- 210000004369 blood Anatomy 0.000 description 1
- 239000008280 blood Substances 0.000 description 1
- 239000003114 blood coagulation factor Substances 0.000 description 1
- 230000037058 blood plasma level Effects 0.000 description 1
- 239000001110 calcium chloride Substances 0.000 description 1
- 235000011148 calcium chloride Nutrition 0.000 description 1
- 229910001628 calcium chloride Inorganic materials 0.000 description 1
- MKJXYGKVIBWPFZ-UHFFFAOYSA-L calcium lactate Chemical compound [Ca+2].CC(O)C([O-])=O.CC(O)C([O-])=O MKJXYGKVIBWPFZ-UHFFFAOYSA-L 0.000 description 1
- 239000001527 calcium lactate Substances 0.000 description 1
- 229960002401 calcium lactate Drugs 0.000 description 1
- 235000011086 calcium lactate Nutrition 0.000 description 1
- 230000006037 cell lysis Effects 0.000 description 1
- 210000000170 cell membrane Anatomy 0.000 description 1
- 230000005859 cell recognition Effects 0.000 description 1
- 210000003850 cellular structure Anatomy 0.000 description 1
- 229920002301 cellulose acetate Polymers 0.000 description 1
- 239000007795 chemical reaction product Substances 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 239000003638 chemical reducing agent Substances 0.000 description 1
- BULLHNJGPPOUOX-UHFFFAOYSA-N chloroacetone Chemical compound CC(=O)CCl BULLHNJGPPOUOX-UHFFFAOYSA-N 0.000 description 1
- 239000003593 chromogenic compound Substances 0.000 description 1
- 238000012411 cloning technique Methods 0.000 description 1
- 238000004891 communication Methods 0.000 description 1
- 150000001875 compounds Chemical class 0.000 description 1
- 230000002153 concerted effect Effects 0.000 description 1
- 108091036078 conserved sequence Proteins 0.000 description 1
- NKLPQNGYXWVELD-UHFFFAOYSA-M coomassie brilliant blue Chemical compound [Na+].C1=CC(OCC)=CC=C1NC1=CC=C(C(=C2C=CC(C=C2)=[N+](CC)CC=2C=C(C=CC=2)S([O-])(=O)=O)C=2C=CC(=CC=2)N(CC)CC=2C=C(C=CC=2)S([O-])(=O)=O)C=C1 NKLPQNGYXWVELD-UHFFFAOYSA-M 0.000 description 1
- 235000018417 cysteine Nutrition 0.000 description 1
- XUJNEKJLAYXESH-UHFFFAOYSA-N cysteine Natural products SCC(N)C(O)=O XUJNEKJLAYXESH-UHFFFAOYSA-N 0.000 description 1
- 231100000433 cytotoxic Toxicity 0.000 description 1
- 230000001472 cytotoxic effect Effects 0.000 description 1
- 231100000135 cytotoxicity Toxicity 0.000 description 1
- 230000003013 cytotoxicity Effects 0.000 description 1
- 238000004042 decolorization Methods 0.000 description 1
- 230000007123 defense Effects 0.000 description 1
- 230000007812 deficiency Effects 0.000 description 1
- 230000007850 degeneration Effects 0.000 description 1
- 238000012217 deletion Methods 0.000 description 1
- 230000037430 deletion Effects 0.000 description 1
- 238000013461 design Methods 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 230000006866 deterioration Effects 0.000 description 1
- 238000011161 development Methods 0.000 description 1
- 102000038379 digestive enzymes Human genes 0.000 description 1
- 108091007734 digestive enzymes Proteins 0.000 description 1
- 229940079919 digestives enzyme preparation Drugs 0.000 description 1
- 238000007865 diluting Methods 0.000 description 1
- LOKCTEFSRHRXRJ-UHFFFAOYSA-I dipotassium trisodium dihydrogen phosphate hydrogen phosphate dichloride Chemical compound P(=O)(O)(O)[O-].[K+].P(=O)(O)([O-])[O-].[Na+].[Na+].[Cl-].[K+].[Cl-].[Na+] LOKCTEFSRHRXRJ-UHFFFAOYSA-I 0.000 description 1
- 229940042399 direct acting antivirals protease inhibitors Drugs 0.000 description 1
- 201000010099 disease Diseases 0.000 description 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 1
- 231100000673 dose–response relationship Toxicity 0.000 description 1
- 239000003814 drug Substances 0.000 description 1
- 229920002549 elastin Polymers 0.000 description 1
- 230000002124 endocrine Effects 0.000 description 1
- 210000002472 endoplasmic reticulum Anatomy 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 210000003499 exocrine gland Anatomy 0.000 description 1
- 210000003020 exocrine pancreas Anatomy 0.000 description 1
- 239000013613 expression plasmid Substances 0.000 description 1
- 210000003722 extracellular fluid Anatomy 0.000 description 1
- 102000036444 extracellular matrix enzymes Human genes 0.000 description 1
- 108091007167 extracellular matrix enzymes Proteins 0.000 description 1
- 239000000284 extract Substances 0.000 description 1
- 230000002349 favourable effect Effects 0.000 description 1
- 238000000855 fermentation Methods 0.000 description 1
- 230000004151 fermentation Effects 0.000 description 1
- 238000001914 filtration Methods 0.000 description 1
- 238000010353 genetic engineering Methods 0.000 description 1
- 239000008103 glucose Substances 0.000 description 1
- 102000049710 human GZMH Human genes 0.000 description 1
- 230000003301 hydrolyzing effect Effects 0.000 description 1
- 230000002209 hydrophobic effect Effects 0.000 description 1
- 230000006882 induction of apoptosis Effects 0.000 description 1
- 239000005550 inflammation mediator Substances 0.000 description 1
- 229940100601 interleukin-6 Drugs 0.000 description 1
- XKTZWUACRZHVAN-VADRZIEHSA-N interleukin-8 Chemical compound C([C@H](NC(=O)[C@H](CC(O)=O)NC(=O)[C@H](CC=1C2=CC=CC=C2NC=1)NC(=O)[C@@H](NC(C)=O)CCSC)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CC=1C=CC=CC=1)C(=O)N[C@@H]([C@@H](C)O)C(=O)NCC(=O)N[C@@H](CCSC)C(=O)N1[C@H](CCC1)C(=O)N1[C@H](CCC1)C(=O)N[C@@H](C)C(=O)N[C@H](CC(O)=O)C(=O)N[C@H](CCC(O)=O)C(=O)N[C@H](CC(O)=O)C(=O)N[C@H](CC=1C=CC(O)=CC=1)C(=O)N[C@H](CO)C(=O)N1[C@H](CCC1)C(N)=O)C1=CC=CC=C1 XKTZWUACRZHVAN-VADRZIEHSA-N 0.000 description 1
- 229940096397 interleukin-8 Drugs 0.000 description 1
- 230000003834 intracellular effect Effects 0.000 description 1
- 230000002427 irreversible effect Effects 0.000 description 1
- 125000000741 isoleucyl group Chemical group [H]N([H])C(C(C([H])([H])[H])C([H])([H])C([H])([H])[H])C(=O)O* 0.000 description 1
- GDBQQVLCIARPGH-ULQDDVLXSA-N leupeptin Chemical compound CC(C)C[C@H](NC(C)=O)C(=O)N[C@@H](CC(C)C)C(=O)N[C@H](C=O)CCCN=C(N)N GDBQQVLCIARPGH-ULQDDVLXSA-N 0.000 description 1
- 108010052968 leupeptin Proteins 0.000 description 1
- 238000012417 linear regression Methods 0.000 description 1
- 238000004811 liquid chromatography Methods 0.000 description 1
- 125000003588 lysine group Chemical group [H]N([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])(N([H])[H])C(*)=O 0.000 description 1
- 229910001629 magnesium chloride Inorganic materials 0.000 description 1
- 239000000463 material Substances 0.000 description 1
- 239000011159 matrix material Substances 0.000 description 1
- 239000002609 medium Substances 0.000 description 1
- 102000006240 membrane receptors Human genes 0.000 description 1
- 108020004084 membrane receptors Proteins 0.000 description 1
- 238000010369 molecular cloning Methods 0.000 description 1
- 210000001616 monocyte Anatomy 0.000 description 1
- 210000005087 mononuclear cell Anatomy 0.000 description 1
- IOUNGFDUDUBFGX-UHFFFAOYSA-N n-(2-chlorophenyl)-2-[4-(2,4-dichlorophenyl)thiadiazol-5-yl]sulfanylacetamide Chemical compound ClC1=CC(Cl)=CC=C1C1=C(SCC(=O)NC=2C(=CC=CC=2)Cl)SN=N1 IOUNGFDUDUBFGX-UHFFFAOYSA-N 0.000 description 1
- 210000000653 nervous system Anatomy 0.000 description 1
- 230000003472 neutralizing effect Effects 0.000 description 1
- 210000000440 neutrophil Anatomy 0.000 description 1
- 230000003448 neutrophilic effect Effects 0.000 description 1
- 238000003199 nucleic acid amplification method Methods 0.000 description 1
- 210000000056 organ Anatomy 0.000 description 1
- 239000003960 organic solvent Substances 0.000 description 1
- 230000002018 overexpression Effects 0.000 description 1
- 244000045947 parasite Species 0.000 description 1
- 101150040383 pel2 gene Proteins 0.000 description 1
- 101150050446 pelB gene Proteins 0.000 description 1
- 108010091212 pepstatin Proteins 0.000 description 1
- FAXGPCHRFPCXOO-LXTPJMTPSA-N pepstatin A Chemical compound OC(=O)C[C@H](O)[C@H](CC(C)C)NC(=O)[C@H](C)NC(=O)C[C@H](O)[C@H](CC(C)C)NC(=O)[C@H](C(C)C)NC(=O)[C@H](C(C)C)NC(=O)CC(C)C FAXGPCHRFPCXOO-LXTPJMTPSA-N 0.000 description 1
- 230000007030 peptide scission Effects 0.000 description 1
- 230000002093 peripheral effect Effects 0.000 description 1
- 210000001539 phagocyte Anatomy 0.000 description 1
- 239000012071 phase Substances 0.000 description 1
- UYWQUFXKFGHYNT-UHFFFAOYSA-N phenylmethyl ester of formic acid Natural products O=COCC1=CC=CC=C1 UYWQUFXKFGHYNT-UHFFFAOYSA-N 0.000 description 1
- 230000035479 physiological effects, processes and functions Effects 0.000 description 1
- MVMXJBMAGBRAHD-UHFFFAOYSA-N picoperine Chemical compound C=1C=CC=NC=1CN(C=1C=CC=CC=1)CCN1CCCCC1 MVMXJBMAGBRAHD-UHFFFAOYSA-N 0.000 description 1
- 239000013600 plasmid vector Substances 0.000 description 1
- 231100000614 poison Toxicity 0.000 description 1
- 239000002574 poison Substances 0.000 description 1
- 230000001323 posttranslational effect Effects 0.000 description 1
- 230000003389 potentiating effect Effects 0.000 description 1
- 238000011533 pre-incubation Methods 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 238000001556 precipitation Methods 0.000 description 1
- 230000009465 prokaryotic expression Effects 0.000 description 1
- 108020001580 protein domains Proteins 0.000 description 1
- 230000006337 proteolytic cleavage Effects 0.000 description 1
- 238000011002 quantification Methods 0.000 description 1
- 108020003175 receptors Proteins 0.000 description 1
- 102000005962 receptors Human genes 0.000 description 1
- 238000003259 recombinant expression Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 238000005215 recombination Methods 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 230000002829 reductive effect Effects 0.000 description 1
- 230000008439 repair process Effects 0.000 description 1
- 238000012552 review Methods 0.000 description 1
- 210000003935 rough endoplasmic reticulum Anatomy 0.000 description 1
- 210000003079 salivary gland Anatomy 0.000 description 1
- 150000003839 salts Chemical class 0.000 description 1
- 230000003248 secreting effect Effects 0.000 description 1
- 210000004739 secretory vesicle Anatomy 0.000 description 1
- 230000035945 sensitivity Effects 0.000 description 1
- 150000003355 serines Chemical class 0.000 description 1
- 210000003491 skin Anatomy 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 210000000952 spleen Anatomy 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 239000000126 substance Substances 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 238000003786 synthesis reaction Methods 0.000 description 1
- 239000012622 synthetic inhibitor Substances 0.000 description 1
- 239000013076 target substance Substances 0.000 description 1
- 125000005931 tert-butyloxycarbonyl group Chemical group [H]C([H])([H])C(OC(*)=O)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 229940124597 therapeutic agent Drugs 0.000 description 1
- 230000001225 therapeutic effect Effects 0.000 description 1
- 238000009210 therapy by ultrasound Methods 0.000 description 1
- 150000007970 thio esters Chemical class 0.000 description 1
- 230000002345 thrombinlike Effects 0.000 description 1
- 231100000331 toxic Toxicity 0.000 description 1
- 230000002588 toxic effect Effects 0.000 description 1
- 230000005945 translocation Effects 0.000 description 1
- 230000032258 transport Effects 0.000 description 1
- 239000002753 trypsin inhibitor Substances 0.000 description 1
- 230000007306 turnover Effects 0.000 description 1
- OUYCCCASQSFEME-UHFFFAOYSA-N tyrosine Natural products OC(=O)C(N)CC1=CC=C(O)C=C1 OUYCCCASQSFEME-UHFFFAOYSA-N 0.000 description 1
- 238000011144 upstream manufacturing Methods 0.000 description 1
- 239000002821 viper venom Substances 0.000 description 1
- 239000000304 virulence factor Substances 0.000 description 1
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/48—Hydrolases (3) acting on peptide bonds (3.4)
- C12N9/50—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
- C12N9/64—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
- C12N9/6421—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
- C12N9/6424—Serine endopeptidases (3.4.21)
- C12N9/6467—Granzymes, e.g. granzyme A (3.4.21.78); granzyme B (3.4.21.79)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P21/00—Preparation of peptides or proteins
- C12P21/06—Preparation of peptides or proteins produced by the hydrolysis of a peptide bond, e.g. hydrolysate products
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2319/00—Fusion polypeptide
- C07K2319/01—Fusion polypeptide containing a localisation/targetting motif
- C07K2319/02—Fusion polypeptide containing a localisation/targetting motif containing a signal sequence
Definitions
- the invention relates to a method for producing biologically active serine proteases and isolated serine protease domains and enzymatically inactive variants of these serine proteases / serine protease domains in prokaryotic hosts.
- proteases are special proteins with peptidolytic and esterolytic properties and can catalytically change and convert other substances and proteins (substrates) irreversibly. Depending on the functionally relevant molecular residues of the catalytically active center, these proteases are divided into four different main classes: serine-dependent proteases, cysteine proteases, aspartases and metalloproteases. Proteases of the serine type fall into two large families, the family of the actual serine proteases and the subtilisin family.
- the best-known representatives of the serine proteases include the digestive enzymes of the gastrointestinal tract, the trypsin, chymotrypsin and the pancreatic elastase, the bactericidal and matrix-degrading enzymes of the neutrophilic granulocytes, leukocyte elastase and cathepsin G, the kallikreine of the serum proteases and the salivary glands. and immune system. Serine proteases in secretory granules of mast cells, lymphocytes, phagocytes or natural killer cells and the serine proteases of the complement system play an important role in the immune defense against viruses, parasites, bacteria and tumor cells and in autoimmune processes.
- Serine proteases specialize in different substrates and can be used for aspartic acid residues (granzyme B, induction of DNA fragmentation in lysed target cells), arginine and lysine residues (trypsin, granzyme A and granzyme K), methionine residues (granzyme M, Met-ase ”) or after hydrophobic amino acids (elastase, proteinase 3, pancreatic elastase, chymotrypsin) hydrolyze a peptide bond.
- aspartic acid residues granzyme B, induction of DNA fragmentation in lysed target cells
- arginine and lysine residues trypsin, granzyme A and granzyme K
- methionine residues granzyme M, Met-ase
- hydrophobic amino acids elastase, proteinase 3, pancreatic elastase, chymotrypsin
- lymphocyte-specific serine proteases (called granzymes) are secreted during target cell lysis and are directly and indirectly after uptake into the cytosol of the target cell in the process of target cell destruction activated killer cells involved.
- Cathepsin G, proteinase-3 and leukocyte elastase are serine proteases from neutrophil granulocytes that break down elastin and other matrix components and are considered as important pathogenicity factors in various chronic inflammatory diseases and autoimmune reactions. Proteinase-3 has also been identified as the disease-specific autoantigen of Wegener's granulomatosis and could be used in the future to treat patients with this condition.
- Babe (Babe et al. (1998) Biotechnol. Appl. Biochem. 27: 117-124) describes an expression method of a serine protease in a prokaryotic system with secretion into the extracellular medium. However, these authors did not refold the expressed protein and process it with cathepsin C. Furthermore was only a low yield of 200 ⁇ g / l and a low storage stability of the serine protease obtained have been observed.
- Höpfner Höpfner et al. (1997) EMBO J. 16: 6626-6635) presents the expression of an active serine protease in E. coli, but activation must be carried out in this method by Rüssel's Viper Venom. However, the very sequence-specific enzyme contained in this poison (an endoproteolytically active serine protease) is not generally available. In addition, the signal sequence recognized by the protease is significantly longer and different than the naturally occurring propeptides, which could impair the effectiveness of the renaturation.
- US Pat. No. 5,679,552 describes the generation of biologically active proteins whose correct N-terminus is achieved by limited proteolysis of an N-terminal helper sequence using cathepsin C.
- the exact processing of the even-numbered amino acid helper sequence with the help of cathepsin C is achieved in that so-called cathepsin C stop sequences have been artificially inserted into the amino terminus of the protein to be produced.
- the method is limited to those proteins that have certain sequence properties at the mature N-terminus, i.e. for proteins with lysine or arginine in the first position, or for proteins with proline in the second or third position within the sequence of the protein to be produced.
- Serine proteases with the N-terminal consensus sequence Ile- (Ile / Val) -Gly-Gly cannot be produced using the method described in US5679552.
- the highly conserved N-terminal sequence of functionally active serine proteases does not correspond to any of the previously known cathepsin C stop sequences.
- EP 0397420 protects the enzymatic conversion of recombinant proteins with helper sequences using cathepsin C using a novel N-terminal stop sequence (Met-Tyr and Met-Arg).
- the N-terminal end (Met-Tyr or Met-Arg) of the recombinant protein to be produced which is described for the first time in this patent, cannot be cleaved off by exopeptidases such as cathepsin C.
- the stop sequences shown in patent EP 0397420 are Also unsuitable for processing and displaying a functional N-terminus in catalytically active serine proteases.
- US Pat. No. 5,013,662 describes the production of N-terminal methionine-free proteins in E. coli.
- the N-terminal methionine caused by the start codon is cleaved by methionine aminopeptidase in vitro or in vivo.
- the N-termini of serine proteases (Ile- (He / Val) -Gly-Gly) cannot be produced by this method either, since the methionine aminopeptidase methionine only cleaves off small amino acids (Gly, Val, Ser, Ala) but before large, aliphatic amino acids such as the absolutely necessary isoleucine.
- the object of the present invention is therefore to provide a method which can be used in the production of biologically active serine proteases or serine protease domains and catalytically inactive but correctly folded variants in prokaryotic hosts.
- the method was not developed for the direct synthesis of natural serine proteases with a complex domain composition (coagulation factors, complement proteases), but specifically for simple serine proteases that only consist of a single domain, the catalytic table, and therefore only a specific one Exercise peptidolytic or esterolytic function with natural or artificial specificity (designer activities)
- These simple serine proteases are widespread in nature and have extremely different tasks in the field of cellular and humoral immune defense (mast cell, granulocyte and lymphocyte proteases, complement factor D), gastroenteral digestion (trypsins, chymotrypsin and elastases), exocrine and endocrine organs (kallikreine), for the normal physiology of the skin and nervous system (neuropsin,
- the method is suitable for producing such serine proteases and derived therefrom Serine proteases with artificial substrate specificity on an industrial scale.
- the products can thus be inexpensively provided in unlimited quantities as research reagents, therapeutic agents and for inhibitor development and testing of these inhibitors in vivo.
- the present invention thus relates to a method for producing biologically active serine proteases, isolated serine protease domains and their amino acid variants in a prokaryotic host, which is characterized by the following steps
- serine proteases are understood to mean all those proteins which have a structural similarity to trypsin and chymotrypsin. These include, for example, the serine proteases of the coagulation and complement system, the immune defense cells, the gastrointestinal tract and the exocrine glands.
- the term serine protease domain refers to independently foldable parts of complex proteins with a structural, three-dimensional similarity to serine proteases. These serine protease domains predominantly have peptidolytic and esterolytic properties, but sometimes also other functions.
- the serine proteases of the coagulation and complement system consist of different covalently linked protein domains and a carboxy-terminally located serine protease domain with catalytic properties. Correctly processed N-terminus, which generally begins with an isoleucine or valine, is essential for the activation and thermodynamically stable folding of serine proteases.
- Prokaryotic hosts which can be used in the sense of the invention are known to the person skilled in the art and include, inter alia, organisms such as Escherichia, Bacillus, Erwinia and Serratia species, in particular E. coli, Bacillus subtilis, Erwinia chrysanthemi, Erwinia carotovora or Serratia marcescens.
- organisms such as Escherichia, Bacillus, Erwinia and Serratia species, in particular E. coli, Bacillus subtilis, Erwinia chrysanthemi, Erwinia carotovora or Serratia marcescens.
- the following can preferably be used: E. coli, Bacillus subtilis.
- helper sequence at the amino terminus of serine proteases or serine protease domains is carried out with the help of cloning techniques and genetic engineering manipulations in prokaryotic cells, DNA molecules or parts of these molecules being introduced into plasmids and optionally by targeted mutagenesis and recombination of DNA segments can be adapted to the required sequence.
- PCR polymerase chain reaction
- vector constructs can be produced which lead to the expression of serine proteases with N-terminal helper sequences.
- adapters or linkers can be added to the fragments to be cloned.
- Appropriate restriction interfaces can also be inserted or redundant, e.g. will remove non-coding DNA or unwanted restriction sites. If insertions, deletions or substitutions are desired, the techniques of in vitro mutagenesis, repair using modified primers, PCR, restriction digestion and ligation are used.
- the degeneration of the genetic code offers the expert, inter alia, the possibility of adapting the nucleotide sequence of the DNA sequence to the codon preference of the respective prokaryotic host. Restriction digestion, sequencing and other biochemical-molecular biological tests are required as analytical methods for assessing the work results.
- the desired sequence to be expressed can be produced synthetically or obtained naturally or contain a mixture of synthetic and natural DNA components.
- synthetic DNA sequences are generated with codons, which are preferred by prokaryotes. These codons, which are preferred by prokaryotes, can be found in published tables (http://pegasus.uthct.edu) and are most frequently found in highly expressed endogenous proteins.
- codons which are preferred by prokaryotes
- different DNA subfragments can be manipulated and combined individually to obtain a DNA sequence that is equipped with a correct reading frame and is translated in the correct direction.
- adapters or linkers can be used for the simplified linking of DNA fragments.
- molecular biological DNA vectors with special control areas which control the transcription of the expression cassette in prokaryotic cells.
- control areas usually include the promoter and special regulatory elements.
- These regulatory elements such as the tac-lac, 11 or trp promoter, are familiar to the person skilled in the art:
- Appropriate prokaryotic expression vectors can be obtained from various companies: pET24c and other pET vectors from Novagen, lambda gtl l and pGBT9 from Clontech, pGX from Qiagen.
- “Expression of the serine protease (s)” in the sense of the invention is understood by the person skilled in the art to mean the expression of a heterologous fusion protein in the prokaryotic host.
- the process for the preparation of serine proteases and / or their fragments includes the expression of a proform in the cytosol of the prokaryotic host, optionally and preferably as inclusion bodies ("IB," inclusion bodies ").
- IB inclusion bodies
- the inclusion body formation depends primarily on the expression rate, whereby there is no clear correlation with the size, hydrophobicity and other properties of the protein to be expressed (Lilie, H. et al.
- the invention therefore also includes a method in which the expression is carried out as soluble recombinant protein / peptides.
- “Renaturation of the expressed fusion proteins” in the sense of the invention is understood to mean the solubilization of protein aggregates and unfolding into naturally identical three-dimensional structures which are stable in physiological buffer solutions.
- the method according to the invention further comprises activating the serine proteases to be produced or their serine protease domains by cleaving off a suitable helper sequence by means of an exopeptidase.
- exopeptidases are particularly preferably as detailed below. Examples include: Cathepsin C, Cathepsin W, Cathepsin B or Diaminopeptidase IV, Cathepsin C-like functional homologues in other species such as Dictyolstelium diseoideum and C. elegans.
- exopeptidase substrates to be processed they do not carry the known exopeptidase stop sequences either in the region of the helper sequence or in the amino-terminal region of the desired product.
- a sequential conversion by a convenient one A combination of different exopeptidases could be carried out, in which, for example, methionine was split off via a specific methionine aminopeptidase in the first step and dipeptide (s) were removed in further steps.
- dipeptides or a combination of several different dipeptides from a pool of suitable dipeptides without natural stop sequences are additionally connected upstream of the N-terminus of the serine protease to be expressed.
- These peptide helper sequences encompass any amino acid combination, but proline, lysine or arginine cannot be in the first place and proline cannot be in the second place of this dipeptide.
- a dipeptide of the form Met-X for example Met-Glu
- step (a) the sequence of the desired serine protease product, which in step (g) is carried out by self-limited conversion using cathepsin C is split off.
- the N-terminally added dipeptide begins with a methionine. Because the translation in prokaryotes begins with a formyl-methionine residue, which in some cases is associated with the endogenous E. coli formylase in the cytosol of the bacteria the £.
- the methionine-containing dipeptides (Met-Y) added in this preferred embodiment are on the one hand resistant to post-translational processing in E. coli, but on the other hand a good substrate for dipeptidylaminopeptidases previously only detected in eukaryotes
- sequences of the form (Met) n-Glu such as Met-Met-Gly (where n is a natural number up to 40 mean)
- Met-Met-Gly where n is a natural number up to 40 mean
- methionines can be used during or after expression, i.e. hm vitro, to be cleaved by methionine aminopeptidase (s)
- care must be taken to ensure that after cleavage of the methionine (s) a helper sequence occurs which has an even number of amino acids without stop amino acids.
- the dipeptide helper sequence Met-Glu is particularly suitable for the embodiment proposed above, it being possible for this dipeptide helper sequence to be preceded by one or more methionines.
- Proline should be avoided at the second position of the dipeptide, as it prevents the dipeptide from being split off by individual exopeptidases, such as cathepsin C. It should be mentioned that tyrosine or arginine should also be avoided at the second position after methionine if cathepsin C is to be used as the exopeptidase in the process according to the invention.
- the dipeptide Met-Glu is used as the helper sequence and the conversion enzyme cathepsin C.
- the present invention thus relates to a method in which, in the preferred embodiments, the exopeptidase is a monoaminopeptidase and / or a diaminopeptidase.
- monoaminopeptidase is understood to mean the above-mentioned methionine aminopeptidase from E. coli (Ben-Bassat et al. (1987) J. Bacteriol. 169: 751-757).
- the diaminoexopeptidase is cathepsin C or a cathepsin C homolog (RCP, described in US Pat. No. 5,637,462).
- the invention relates to a deterioration as described above, wherein the biologically active serine proteases and serine protease domains to be produced do not inactivate the exopeptidase to be used and, in a further embodiment, the exopeptidase does not irreversibly change the protein to be produced. Inactivation of the exopeptidase (s) by active serine proteases (e.g. by proteolytic cleavage) should be avoided.
- an irreversible change in the serine protease (s) and / or its fragments to be produced should be understood to mean cleavages, changes in conformation and / or inhibitions.
- aggregate formation between the proteins / fragments to be produced and the exopeptidase used should be avoided.
- the invention comprises a method, wherein the fragment of a serine protease to be produced is the catalytic domain of a serine protease.
- the invention further comprises a method in which the biologically active serine protease to be produced is seen from one or more non-covalently linked catalyti
- the invention also encompasses those serine proteases and their fragments which are due to
- Serine protease variants occur naturally and other non-catalytic ones
- the invention also includes mutine-derived serine proteases without catalytic activity.
- the invention comprises a method in which the
- Serine protease leukocyte elastase proteinase-3, complement factor D, azurozidine,
- the invention relates to a method for producing a granzyme, the granzyme being A, B, K, H, M or L.
- Granzyme L comprises the nucleotide sequence shown here in SEQ ID No. 1.
- the vector pET24c (Novagen) was cut for the cloning of human granzyme K with the restriction endonucleases Ndel and EcoRI.
- the sequence coding for human granzyme K was amplified by means of two-stage PCR from human bone marrow cDNA.
- the human granzyme K cDNA was amplified between the middle of the first and the end of the fifth exon of human bone marrow cDNA using a pair of correctly hybridizing oligonucleotides (so-called outer oligos, see P1 and P2 in the sequence listing)
- PCR Conditions template DNA: 1 ⁇ l of an mRNA transcribed into cDNA with reverse transcriptase (2 ⁇ g), nucleotides: 0.2 mM each; oligos: 1 ⁇ M each; enzyme 0.5 ⁇ l / 50 ⁇ l mixture [2.5 units / ⁇ l] native yw- Polymerase (Stratagene); buffer: Stratagene; program: non-cyclic denaturation: 5 minutes at 95 ° C, cyclical steps: 1 minute at 95 ° C, 1 minute at 56 ° C, 1 minute at 72 ° C, 35 cycles, non-cyclic elongation: 5 minutes at 72 ° C).
- PCR product obtained served as a template sequence in the second round of PCR, in which the insert for the cloning into the pET24c vector was amplified by means of a second pair of oligonucleotides (inner oligos, see P3 and P4 in the sequence listing)
- PCR conditions template DNA: 5 ng; oligos: 1 ⁇ M each; nucleotides: 0.2 mM each; enzyme: 0.5 ⁇ l / 50 ⁇ l batch [2.5 units / ⁇ l] native w-polymerase (Stratagene); buffer: Stratagene; program: non-cyclic denaturation: 5 minutes at 95 ° C, cyclical steps: 1 minute at 95 ° C, 1 minute at 58 ° C, 1 minute at 72 ° C, 24 cycles, non-cyclic elongation: 5 minutes at 72 ° C).
- the Ndel and EcoRI interfaces were introduced into the oligos.
- the amplificate obtained in this way was purified from the gel (Qiaquick protocol from Qiagen) with the restriction endonucleases Ndel and EcoRI and cut into the vector (ligation conditions: enzyme: 1.5 ⁇ l / 20 ⁇ l mixture [1 unit / ⁇ l] T4 ligase (Boehringer Mannheim); vector: 50 ng / 20 ⁇ l mixture; insert: 50 ng / 20 ⁇ l mixture; buffer: Boehringer Mannheim; incubation: 16 hours at 15 ° C), so that 8 bases in 3 'direction from the ribosome binding site translate the Transcript begins with the methionine of the N ⁇ el palindrome.
- the ⁇ -terminal sequence for both granzymes is composed of the pro (di) peptide Met-Glu and the subsequent conserved sequence of the mature granzymes Ile-Ile-Gly-Gly.
- the translation stops with the natural stop codon.
- Granzyme K of the mouse was amplified using the identical oligonucleotide in the ⁇ -terminal region (P5 and P3) and P6 as Reverse primer.
- the granzyme K fragment of the mouse for the expression cassette was amplified in 35 cycles using 5 ng DNA, purified from the gel (Qiaquick protocol from Qiagen) with the restriction endonuclease Ndel and the 3'- End kinased.
- PCR 0.2 mM of the four nucleotides, 1 ⁇ M of each oligo and 0.5 ⁇ l / 50 ⁇ l batch [2.5 units / ⁇ l] native / w polymerase (Stratagene) in the buffer system from Stratagene and the following thermocycler program were used: non-cyclic Denaturation: 5 minutes at 95 ° C, cyclical steps: 1 minute at 95 ° C, 1 minute 51 ° C, 1 minute 72 ° C, 35 cycles, non-cyclic elongation: 5 minutes at 72 ° C, for cloning in pET24c became the vector by digestion with Hind ⁇ .
- the insert was ligated into the vector thus prepared as described above.
- the resulting clones were selected for kanamycin [30 ⁇ g / ml] and verified by restriction analysis (double digestion) using Ndel and Xh ⁇ l (New England Biolabs) and sequencing.
- the vector pET24c-His-Strep-tag (modified Novagen vector) was cut for the cloning of human granzyme M with the restriction endonucleases Ndel and Pstl.
- the sequence coding for human granzyme M was amplified by means of two-stage PCR from human bone marrow cDNA.
- the human granzyme M cDNA was amplified between the middle of the first and the end of the fifth exon of human bone marrow cDNA using a pair of correctly hybridizing oligonucleotides (so-called outer oligos, see P7 and P8 in the sequence listing)
- PCR Conditions Template DNA: 1 ⁇ l of an mRNA transcribed into cDNA with reverse transcriptase (2 ⁇ g); nucleotides: 0.2 mM each; oligos: 1 ⁇ M each; enzyme 0.5 ⁇ l / 50 ⁇ l mixture [2.5 units / ⁇ l] native w -Polymerase (Stratagene); buffer: Stratagene; program: non-cyclic denaturation: 5 minutes 95 ° C, cyclic: 1 minute 95 ° C, 1 minute 56 ° C, 1 minute 72 ° C, 24 cycles, non-cyclic elongation : 5 minutes 72 ° C).
- the PCR product obtained served as template DNA in the second round of PCR, in which, using a second pair of oligonucleotides (inner oligos, see P9 and P10 in the sequence listing), the insert for cloning into the pET24c-His-Strep-t ⁇ g vector was amplified (PCR conditions: template DNA: 5 ng; oligos: 1 ⁇ M each; nucleotides: 0.2 mM each; enzyme: 0.5 ⁇ l / 50 ⁇ l mixture [2.5 units / ⁇ l] native PW polymerase (Stratagene); buffer : Stratagene; program: non-cyclic denaturation: 5 minutes 95 ° C, cyclic: 1 minute 95 ° C, 1 minute 58 ° C, 1 minute 72 ° C, 24 cycles, non- cyclic elongation: 5 minutes 72 ° C).
- PCR conditions template DNA: 5 ng; oligos: 1 ⁇ M each; nucleotides: 0.2
- the Ndel and Nsil interfaces were introduced in the oligos.
- the sequence coding for the first ten amino acids was additionally optimized with regard to the codon frequency in E. coli (Fig. 3).
- the influence of this codon optimization on the expression strength is illustrated in Fig. 2b.
- the amplificate obtained in this way was purified from the gel (Qiaquick protocol from Qiagen) and ligated into the vector (ligation conditions: see example la).
- the pro (di) peptide Met-Glu is also used as the N-terminal helper sequence for mouse granzyme K and the cDNA reading frame of the mature murine granzyme K is added to it.
- translation with the natural stop codon stopped.
- the resulting clones were selected for kanamycin [30 ⁇ g / ml] and confirmed by restriction analysis (double digestion) with Ndel and EcoRI (New England Biolabs) and DNA sequencing.
- the plasmids constructed according to examples la and lb were transformed into the expression strain E. coli B834 DE3 (Novagen) and the expression was first tested on a small scale. 10 ml cultures were grown with LB-kanamycin (for concentration see Example 1) to an OD600 of 0.5, the expression was induced with 1 mM IPTG and incubated for 3 hours at 37 ° C. to an OD600 of 1.5. IPTG activates the IacUV-Promoto ⁇ , which controls the chromosomally encoded T7 polymerase in the B834 DE3 strain, which in turn takes on the transcription of the cloned granzyme gene under T7 / c promoter control.
- the bacteria were harvested by centrifugation and the pellet washed once with PBS pH 7.4 before digestion in lysis buffer at room temperature.
- the bacterial membranes were broken either by two French press cycles (1000-1200 psi) or three sonification cycles (15 minutes each 320 W), the lysate was mixed with a third of the volume of wash buffer I and incubated for 1 hour at room temperature in an overhead shaker , The suspension was centrifuged at 17200 g at 4 ° C. for 20 minutes, the pellet was resuspended in washing buffer I, incubated for 1 hour at room temperature in a shaker and centrifuged again. This process was repeated twice with wash buffer I and three times with wash buffer II. After the last centrifugation, a small aliquot of the IB preparation was analyzed for purity using SDS-PAGE, the rest was solubilized. The following buffers were used for this:
- the renaturation was carried out in three pulses with time intervals of 8 hours each.
- the renaturation batches of human granzyme K were incubated at room temperature, those of mouse granzyme K and human granzyme M at 4 ° C.
- the protein solution (-10 mg / ml) from Example 2 was in each case diluted 1: 100 (vol / vol) in the renaturation buffer with stirring and incubated until the next pulse without agitation.
- the refolding batch was incubated for a further two days at room temperature or 4 ° C. without agitation.
- the reaction volume was filtered (via cellulose acetate), concentrated to approx.
- Cathepsin C was activated in the presence of a thiol component and halide ions by reduction, for example by 10 mM mercaptoethanolamine HCl. Since it is through the However, if a reducing agent is present in the conversion mixture, the disulfide bridges of the folded granzyme can be reduced, the activation and conversion conditions were first optimized in terms of the thiol concentration, the duration of activation and the subsequent dialysis, and the pH. The optimal parameters used were 2 mM mercaptoethanolamine for activation at pH 5.0 over 20 minutes and then dialyzed against PBS, 75 mM NaAcetat at pH 5.5 for 20 minutes.
- the FPLC peak fraction was dialyzed against PBS pH 6.0 and concentrated to approx. 1 ml ( ⁇ 20 mg protein / ml). 3 units of cathepsin C per milliliter [stock: 5U / ml in H2O] were initially for 20 minutes at 37 ° C. in 5 mM 2-mercaptoethanolamine,
- PBS pH 5.0 activated and then dialyzed for 20 minutes at room temperature against PBS, 75 mM Na acetate, pH 5.5 to remove 2-mercaptoethanolamine.
- the active cathepsin C was mixed 1: 1 (vol / vol) with the zymogen and incubated for 6 hours at room temperature, any precipitations that occurred were separated by centrifugation and the filtered sample was subjected again to cation exchange chromatography (see Example 3) to separate cathepsin C.
- the thiobenzyl ester substrates and Ellman's reagent were diluted to final concentrations of 0.3 mM in test buffer (150 mM Tris, 50 mM NaCl, 0.01% Triton X-100, pH 7.6).
- the various granzyme preparations were also diluted to 3-15 nM in test buffer.
- the color change associated with the conversion of the substrates was measured at 405 nm and room temperature over 5 minutes in an ELISA reader. To calculate the turnover rate, the difference between the absorptions at the beginning and after 5 minutes was formed and related to the time.
- Fig. 1 Description of the primers used
- Fig. 2a Analysis of the expression, purification and renaturation of human
- Fig. 2b Analysis of the expression of human granzyme M (hGzmM) using different expression constructs. 12% SDS-PAGE with subsequent Coomassie staining of hGzmM with natural C-terminus (name hGzmM / WT) and (His) 8-Strep-t g-C-terminus (name
- the digestion procedures are: 1: non-induced culture, digestion in 2.5% SDS, 5% b-mercaptoethanol; 2: induced culture, digestion as in 1; 3: induced culture, digestion in 5% SDS, 200 mM DTT, 5% b-mercaptoethanol; 4: induced culture with idealized codons, digestion as in 1.
- Fig. 3 N-terminal sequence comparison between human granzyme K (hGzmK) and human granzyme M (hGzmM) at the amino acid level (A) and nucleotide level (B).
- the codon frequencies in E. coli (Ausubel et al., 1999) are given in%, rare codons are underlined.
- the one for N-terminal optimization the oligo designed for expression constructs is shown in (C), the changed positions are underlined.
- Fig. 4a Substrate specificity of human granzyme K (hGzmK). 0.1 mM each of the thiobenzyl ester substrates and 3 nM each of the proform (black), the converted form (hatched) and the converted S195A mutant (gray) were used. The substrate conversion was measured at 405 nm and room temperature over 5 minutes.
- Fig. 4b Substrate specificity of mouse granzyme K (mgzmK). 0.1 mM each of the thiobenzyl ester substrates and 5 nM each of the proform (black) and the converted form (hatched) were used. The substrate conversion was measured at 405 nm and room temperature over 5 minutes.
- Fig. 4c Substrate specificity of human granzyme M (hGzmM). In each case 0.1 mM of the thiobenzyl ester substrates and 15 nM of the Proform
- Fig. 5 Granzyme L cDNA sequence
- Fig. 6 Amino acid sequence of granzyme L. Generation of catalytically active granzyme K from Escherichia coli inclusion bodies and identification of efficient granzyme K inhibitors in human plasma
- Granzymes are granule-stored lymphocyte serine proteases that are involved in cytotoxic defense reactions of T and natural killer cells after target cell recognition.
- a fifth human granzyme (granzyme 3, lymphocyte tryptase-2), renamed granzyme K (gene name GZMK), has recently been cloned from lymphocyte tissue.
- GZMK granzyme 3
- the natural proform of granzyme K with the amino-terminal propeptide Met-Glu was expressed in the form of inclusion bodies and, after refolding of precursor molecules, converted to its active enzyme by cathepsin C.
- Recombinant granzyme K cleaves synthetic thiobenzyl ester substrates according to Lys and Arg with k cat / K m values of 3.7 x 10 and 4.4 x 10 4 M "1 s * 1. It has been shown that the activity of granzyme K by the synthetic compounds Phe-Pro-Arg-chloromethyl ketone, phenylmethylsulfonyl fluoride, PefablocSC and benzamidine, which are inhibited by the Kunitz-type inhibitor aprotinin and by human plasma.
- the subunit and the second carboxy-terminal Kunitz type domain of bikunin have been identified as true physiological inhibitors with Kj values of 64, 50 and 22 nM, respectively.
- Inter- ⁇ -trypsin inhibitor and free bikunin have the potential to be extracellular Neutralize the activity of granzyme K after T cell degranulation, and could thus contain non-specific damage to neighboring cells at locations of inflammatory reactions.
- Perforin and Granzyme are essential components of cytosolic granules and fulfill important tasks for the secretion-dependent cytotoxicity mediated by T cells and natural killer cells against virus-infected host cells, tumor cells, and antigenetically modified non-transformed host cells. After specific recognition of the target cell, granules are exocytosed in the direction of the target cell membrane, and perforin and granzymes are released in concerted action (1-4).
- the two quantitatively most important granzymes of cytolytic T cells are granzymes A and B, which have been shown to contribute to the induction of apoptosis and DNA fragmentation in target cells.
- All granzymes are synthesized as pre-pro-enzymes in the rough endoplasmic reticulum and into active enzymes in a two-step process by cleavage of the signal peptide and subsequent removal of the propeptide by means of a quite similar, presumably identical dipeptidylaminopeptidase from cytosolic granules, called cathepsin C, converted (15, 16).
- GzmK granzyme 2, lymphocyte tryptase-2
- granzyme 2 lymphocyte tryptase-2
- RNK-16 rat NK tumor line
- the human GzmK has recently been cloned and has been shown to have hydrolytic activities for the thioester substrates Z-Lys-SBzl and Z-Arg-SBzl (21) and for a highly basic peptide which is the SV40 nuclear localization signal (24), has. High mRNA levels for GzmK are detected in NK cells and activated T cells, but are absent in normal tissues that do not contain a high number of these cells.
- Recombinant granzymes have been produced by secretion and transport of precursor forms that carry signal sequences in various eukaryotic and prokaryotic host systems, including yeast (25), baculovirus-infected insect cell lines (26), mammalian cell lines (16, 27), Escherichia coli (28), and Bacillus subtilis (24).
- yeast 25
- baculovirus-infected insect cell lines 26
- mammalian cell lines (16, 27)
- Escherichia coli 28
- Bacillus subtilis Bacillus subtilis
- Amino-terminally extended and catalytically inactive precursors of GzmK are folded back into soluble proteins and then subjected to limited proteolysis by reaction with a dipeptidyl aminopeptidase, cathepsin C, which appeared suitable for selectively removing the excess amino acids at the amino terminus, which are in catatalytically active GzmK are not available.
- I ⁇ l inter- ⁇ -trypsin inhibitor
- the cDNA coding for the human GzmK was determined by means of PCR of bone marrow cDNA using the outer oligonucleotides DJ 209 5'-TTC CTA ATA GTT GGG GCT TAT-3 (coding strand) and DJ 210 5'-CAA CTC TAA CCT GCG AGC ATA-3 '(counter strand) amplified.
- Inner oligonucleotides DJ 255 (5 " -GGC TTA CCA TAT GGT TAT TGG AGG GAA AGA A-3), DJ 601 (5'-TGT GTT TCC ATA TGG AAA TTA-3 1 ), DJ 373 (5'-GGC TTA CCA TAT GGG GGA AAT TAT TGG AGG G-3 ') (coding strand) introduced an Nde I restriction site and the rear oligonucleotide DJ 535 (5'-AAT AGA ATT CTT TGT AAC TTA ATT-3', opposite strand) introduced an Eco RI restriction site (Fig -f)
- the product of the amplification with DJ 373 / DJ 535 includes the N-terminal prosequence Met-Gly-Glu, the amplificate with DJ 601 / DJ 535 starts with the natural propeptide sequence Met-Glu from human GzmK (Fig.
- the bacteria were lysed in 50 mM T ⁇ s-HCl, 2 M MgCl 2 with 10 ⁇ g / ml DNase I and 0.25 mg / ml lysozyme, pH 7.2 by French Press or ultrasound treatment.
- IB were separated by centrifugation and twice with 50 mM Tns-HCl, 60 M EDTA, 1.5 M NaCl, 6% Triton X-100, pH 7.2, followed by two washes with 50 M Tns-HCl, 60 mM EDTA, pH 7.2
- the purified EB were in 6 M guanidinium hydrochloride, 100 mM Tns-HCl, 20 mM EDTA, 15 mM GSH, 150 mM GSSG, pH 8.0 solubilized overnight at room temperature (RT) in an overhead shaker and then at 4 ° C.
- the dialysate was centrifuged at 30000xg, filtered and, for further purification and concentration, via rapid protein liquid chromatography (FPLC). applied to a Mono S Sepharose column (Amersham Pharmacia Biotech) GzmK was eluted from the column at RT in a linear salt gradient of 20 column volumes from 0.15 to 2 M NaCl in the same buffer (PBS) and the protein concentration of the GzmK fraction was determined using the Bradford (Coomassie binding) detection.
- FPLC rapid protein liquid chromatography
- the FPLC fractions of various refolded GzmK proforms were buffered by dialysis against PBS, pH 6.5 and concentrated to approx. 10 mg / ml.
- Bovine Cathepsin C (Sigma) was activated for 30 minutes at 37 ° C in PBS, 10 mM 2-mercaptoethanolamine, 75 mM Na acetate, pH 5.0 and 30 minutes against PBS, 75 mM Na- before incubation with GzmK proforas. Acetate, pH 5.5 dialyzed. Five units of cathepsin C in dialysis buffer and 10 mg GzmK-Proform were mixed in equal volumes and incubated at RT.
- the increase in enzymatic GzmK activity was measured as described below using the synthetic substrate N ⁇ -benzyloxycarbonyl-L-lysine-thiobenzyl ester (Z-Lys-SBzl) and the incubation was stopped with constant activity.
- the active GzmK was separated from Cathepsin C using the cation chromatography described above.
- the concentration of the active GzmK was then determined by titration of the active centers with 4-nitrophenyl-4'-guanidinobenzoate (4-NPGB) (Sigma).
- the concentration of Bikunin, the second Kunitz domain of Bikunin and I ⁇ l were determined by titration with trypsin, which was also titrated with 4-NPGB.
- Activity tests were carried out at RT in a 96 well with a reaction volume of 150 ⁇ l / well in 50 mM Tris-HCl, 0.15 M NaCl, 0.01% Triton X-100, pH 7.6 with 0.3 mM 5.
- 5'-dithiobis (2-nitrobenzoic acid) (Ellman's reagent) (Sigma).
- the substrate concentrations were 0.3 mM in the activity tests and between 0.05 and 1.5 mM in kinetic studies.
- Z-Lys-SBzl (Sigma) was dissolved in water, Z-Arg-SBzl, Boc-Ala-Ala-Met-SBzl and Boc-Ala-Ala-Asp-SBzl (Enzyme Systems Products, Livermore, CA, USA) Me 2 SO.
- GzmK was used after titration of the active centers in concentrations of 3 nM in activity tests and 0.5-7.5 nM in kinetic tests.
- the hydrolysis rate of the substrates was determined as a measure of the activity, and the increase in absorption at 405 nm over time was measured in the Dynatech MR4000 ELISA reader.
- Equilibrium dissociation constants Kj in the case of reversible GzmK inhibitor interactions and constants of the association rate (k. ⁇ ss ) of GzmK with antithrombin III (ATIII) were determined as described elsewhere (32).
- aprotinin bovine pancreas trypsin inhibitor
- Bayer Bayer (Leverkusen) GzmK was pre-incubated for 15 minutes at RT with different concentrations of each inhibitor before the reaction was started with the addition of the Z-Lys-SBzl substrate.
- the decrease in the hydrolysis rate was measured and Kinetic constants calculated by non-linear regression In plasma tests, filtered (0 22 ⁇ m) EDTA blood plasma from a young and healthy donor was treated with 3 nM titrated GzmK and pre-incubated for 15 minutes at RT before substrate addition.
- ⁇ 2 - Macroglobulin was chemically inactivated by 4 - Incubation of the freshly isolated blood plasma at 23 ° C.
- the I ⁇ l concentration in the plasma samples used was determined by radial immunodiffusion. For this purpose, holes of 2 mm in diameter were punched in horizontal agarose gels, which consisted of 3% PEG 4000, 1% SeaKe agarose (FMC Bioproducts, Rockland, ME, USA), 0 02% sodium azide, 16 8 mg / 1 rabbit anti-human I ⁇ l (DAKO, Glostrup, Denmark) in 25 mM barbital buffer (3 7 M diethyl barbiturate, 21 3 M 5.5 diethyl barbiturate sodium salt, 1 3 mM calcium lactate, 0 7% sodium azide , pH 8 6) were poured into the punches in T ⁇ or duplicates 5 ⁇ l of the different plasma samples or different dilutions of the titrated I ⁇ l as standard.
- the gels were incubated at 4 ° C. in a moist chamber until the formation of rings was completed , then dried and stained in 0.1% amido black, 45% methanol, 2% acetic acid for 3-5 minutes. After decolorization in 90% methanol, 2% acetic acid, a standard curve was created from the areas of the titrated I ⁇ l samples from which the I ⁇ l concentrations of the plasma samples were determined
- coli either started with a methionine followed by the modified N-terminus Val-Ile-Gly-Gly or consisted of Met-Gly-Glu or Met-Glu followed by the natural amino acid sequence of mature GzmK, Ile-Ile-Gly-Gly (Fig.?).
- E. coli strain B834 DE3
- high expression rates were achieved with yields of 50-75 mg IB per liter culture or a 50% share of the total bacterial protein. Due to the high yields and insolubility of the recombinant proteins, the IB could be efficiently removed from the £. co / Z proteins are separated and subjected to refolding without further purification steps.
- S shows total bacterial extracts before and after induction of protein expression as well as an IB preparation. Proteins that remained soluble after replacing the refolding buffer with PBS were analyzed using SDS-PAGE and showed the expected size of GzmK. The degree of methionine cleavage in E. coli by endogenous MAP was examined by N-terminal sequencing of the renatured, FPLC-purified proforms and estimated from the ratio of the two phenylthiohydantoin derivatives released at each step of cyclic Edman degradation. The methionine of the pre-sequence Met-Gly-Glu was only partially removed, so that only two thirds of this Proform started with the desired dipeptide Gly-Glu.
- the GzmK pro forms obtained in this way were then subjected to the exopeptidolytic activity of bovine cathepsin C.
- Amino-terminal protein sequencing confirmed the successful conversion of both proforms, Gly-Glu-GzmK and Met-Glu-GzmK. Amino acid residues of shorter sequences were not detected in the Edman degradation.
- proform construct with the Met-Glu dipeptide sequence at the amino terminus of the mature GzmK represents the most favorable design of a proform that can be processed in vitro using the dipeptidylaminopeptidase cathepsin C into an authentic enzyme.
- Glutamate in the second position prevents the cleavage of amino terminal methio residues in E. coli and, together with methionine, is a suitable in wtro substrate for bovine cathepsin C.
- Met-Glu proforms for GzmK 20% of the IB material was folded back and subjected to conversion Half of it was finally obtained in highly concentrated and homogeneous form after ion exchange chromatography
- Effective plasma inhibitors exist for most granule-associated serine proteases such as leukocyte elastase, cathepsin G and proteinase 3 (35).
- GzmK-specific inhibitors a constant amount of recombinant GzmK was incubated with increasing concentrations of whole plasma and the Z-Lys SBzl esterase activity measured GzmK was inhibited by plasma proteins even in low concentrations in a dose-dependent manner (Fig i?
- ATIII showed no inhibitory potential in concentrations corresponding to the ATIII concentrations in the full plasma tests ( Fig 1 3 bars) Since inhibition of GzmK by ⁇ 2 -macroglobulin (data not shown) and ATIII in the absence of heparin does not appear to be responsible for the main inhibitory capacity of human plasma, we preferred I ⁇ l, the predominant form of bikunin in human plasma, as another possible inhibitor for human GzmK into consideration.
- Bikunin D2 The carboxy-terminal Kunitz-type domain of Bikunin (Bikunin D2) is known to inhibit trypsin-like enzymes with Lys and Arg specificity at the S1 secondary position, but an endogenously synthesized target enzyme with high affinity for this domain has not yet been identified .
- Bikunin D2 which was produced in recombinant form in Pichia pastoris, and determined its aquilibrium dissociation constant (K;). Domain 2 efficiently blocked GzmK activity with a K; of 22 nM.
- a properly designed amino terminus starting with I (IV) GG is critical for a granzyme to take its active conformation.
- the amino-terminal methionine is only removed by the endogenous MAP if amino acid residues are smaller Great ones like glycine, alanine, senn, threonine, valine, or proline follow at the second position (34).
- Our initial attempts to solve this problem for GzmK were unsuccessful. Valine naturally occurs at the amino terminus of some serine proteases and was therefore considered a viable replacement for the first Ile residue, but when we replaced He to favor the removal of amino-terminal Met residues, over 90% of the recombinant molecules still carried the methionine residue as we did by amino-terminal sequencing.
- the procedure described here is the first one that is about aggregate £. coli inclusion bodies enable the preparation of active human GzmK and its natural precursor by refolding and exopeptidolytic processing.
- the enzyme shows the same biochemical properties and specificities as biosynthetically folded GzmK, which originates from lymphokine-activated killer cells or from supernatants from GzmK-secreting B. subtilis (21, 24).
- Our process delivers pure and active enzyme in the milligram range and thus overcomes it Problems of expensive and low expression in mammalian cell lines.
- ATIII is the major inhibitor of GzmK in human plasma in the absence of heparin
- ATIII is the major inhibitor of GzmK in human plasma in the absence of heparin
- the inhibition of GzmK by purified ATIII was slow, and the apparent association rate of 1.7 x 10 M * s " was of the same order of magnitude as for granzyme A.
- inhibition of GzmK already occurred with diluted plasma samples at ineffective ATIII concentrations and was independent of ATIII, and antibodies against ATIII did not change the kinetics of inhibition in human plasma, indicating that ATIII is not the most important inhibitor of GzmK in plasma.
- Bikunin in I ⁇ l and free bikunin inhibit the trypsin of the exocrine pancreas (36), acrosine from human sperm cells (39) and plasmin (36), but not factor Xa and plasma kallikrein
- the blood coagulation factor Xa and plasma kallikrein are only recognized by the second Kunitz domain of Bikunin, but not by intact Bikunin and I ⁇ l for steric reasons.
- Protease binding via the recognition loop of D2 is recognized by the amino-terminal Kunitz type domain Dl, which very likely interacts with D2-bound small trypsin-like proteases and blocks the binding of larger proteases, restricted (40) equilibrium dissociation constants for the interaction of the latter two enzymes with the isolated Kunitz domain 2 are nevertheless 20 times higher (37) than that for GzmK Until now, plasmin was the only enzyme in the interstitial and intravascular space that had a K.
- Inhibitors of human plasma and interstitial fluids limit the extracellular effects of enzymes after their release or activation, and thus prevent undue effects on neighboring cells and distant tissues.
- Granzymes which are controlled by liquid phase inhibitors, should act on substrates on the surface of Host cells or are present in the extracellular compartment.
- the existence of a potent GzmK-specific Kunitz-type inhibitor in human plasma supports the idea that GzmK performs additional extracellular functions in addition to its intracellular role in the DNA fragmentation of target cells (22).
- human Granzyme A 41, 42
- NK natural killer cells
- GzmK granzyme K IBs
- inclusion bodies I ⁇ l, inter- ⁇ -trypsin inhibitor, LB, Luria-Bertani bouillon
- RT room temperature
- Z-Lys-SBzl N ⁇ -benzyloxycarbonyl-L-lysine-thiobenzyl ester
- Z benzyloxycarbonyl, SBzl
- the express ion cassettes for human GzmK precursors were cloned into the Nde I and Eco RI interfaces of pET24c (+) (Invitrogen). Transcription from the T7 promoter (black arrow) is driven by chromosomally encoded T7 RNA polymerase, which is driven by Isopropyl-1-thio-ß-D-galactopyranoside can be induced. Three constructs with amino-terminal sequence extensions (open bars) at the amino-terminus of mature GzmK (gray bar) were prepared.
- Fig. F Preparation of catalytically active human GzmK from E. coli inclusion bodies.
- Fig. 9 Substrate specificity of recombinant human GzmK. Enzymatic activity of unprocessed zymogen (ME pre-sequence, black bars) and activated GzmK (hatched bars) was measured using the specified thiobenzyl ester substrates at a final concentration of 0.1 nM. The enzyme concentration was 3 nM for both the unprocessed and the activated form of GzmK
- Fig. 4 Inhibition of GzmK by purified I ⁇ l, Bikunin D2 and ATIII compared to 2.5% human plasma.
- GzmK activity (3 nM, first to seventh column) was after incubation with 2.5% (v / v) human blood plasma (second column), 67.5 nM ATIII (third column), 26 nM Bikunin D2 (fourth column ), a mixture of 2.5 nM Bikunin D2 and 23.2 nM I ⁇ l (fifth column), 26 nM Bikunin D2 and 67.5 nM ATIII (sixth column) and with 67.5 nM ATIII, 2.5 nM Bikunin D2 and 23.2 nM I ⁇ l (seventh column) measured inhibitor concentrations were chosen so that physiological ATIII, total bikunin and total I ⁇ l concentrations of 40 times diluted human plasma were mimicked.
- Molar concentrations of active aprotinin were determined using activity-titrated bovine trypsin CMK, chloromethyl ketone, TPCK, N-tosylphenylalanine chloromethyl ketone, TLCK, N-tosyllysine chloromethyl ketone, PMSF, phenylmethylsulfonyl fluoride
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Genetics & Genomics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Health & Medical Sciences (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Medicinal Chemistry (AREA)
- Chemical Kinetics & Catalysis (AREA)
- General Chemical & Material Sciences (AREA)
- Enzymes And Modification Thereof (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
Abstract
L'invention concerne un procédé de fabrication de sérine-protéases biologiquement actives, de domaines isolés de sérine-protéases et de leurs variantes aminoacides chez un hôte procaryote, caractérisé par addition N terminal d'une séquence auxiliaire d'un dipeptide appropriée pour la dégradation par une dipeptidylaminopeptidase, l'expression de la/ ou des sérine-protéases et/ou de leurs fragments avec des séquences auxiliaires dipeptidiques N terminal, éventuellement comme corps d'inclusion, et par renaturation de la protéine exprimée et activation de la/ ou des sérine-protéases et/ou des domaines de sérine-protéases par dédoublement de la séquence auxiliaire par une exopeptidase.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| DE19943177 | 1999-09-09 | ||
| DE19943177A DE19943177C2 (de) | 1999-09-09 | 1999-09-09 | Verfahren zur Herstellung von aktiven Serienproteasen und inaktiven Varianten |
| PCT/EP2000/008803 WO2001018215A1 (fr) | 1999-09-09 | 2000-09-08 | Procede de fabrication de serine-proteases actives et de variants inactifs |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| EP1214428A1 true EP1214428A1 (fr) | 2002-06-19 |
Family
ID=7921396
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| EP00964151A Withdrawn EP1214428A1 (fr) | 1999-09-09 | 2000-09-08 | Procede de fabrication de serine-proteases actives et de variants inactifs |
Country Status (6)
| Country | Link |
|---|---|
| US (1) | US20020192754A1 (fr) |
| EP (1) | EP1214428A1 (fr) |
| JP (1) | JP2003529330A (fr) |
| CA (1) | CA2403330A1 (fr) |
| DE (1) | DE19943177C2 (fr) |
| WO (1) | WO2001018215A1 (fr) |
Families Citing this family (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| JP5376747B2 (ja) * | 2002-10-02 | 2013-12-25 | カタリスト バイオサイエンシーズ, インコーポレイテッド | 改変された特異性を有するプロテアーゼを作製する方法およびスクリーニングする方法 |
| US20060024289A1 (en) * | 2002-10-02 | 2006-02-02 | Ruggles Sandra W | Cleavage of VEGF and VEGF receptor by wild-type and mutant proteases |
| WO2005110453A2 (fr) * | 2004-04-12 | 2005-11-24 | Catalyst Biosciences, Inc. | Clivage du vegf et du récepteur du vegf par mt-sp1 de type sauvage et mutant |
| ES2611608T3 (es) * | 2005-10-21 | 2017-05-09 | Catalyst Biosciences, Inc. | Proteasas modificadas que inhiben la activación del complemento |
| TWI369402B (en) | 2006-07-05 | 2012-08-01 | Catalyst Biosciences Inc | Protease screening methods and proteases identified thereby |
| WO2012048856A1 (fr) * | 2010-10-12 | 2012-04-19 | Glucometrix Pvs Gmbh | Proinsuline avec séquence auxiliaire |
| EP2867250A2 (fr) * | 2012-04-04 | 2015-05-06 | GlucoMetrix AG | Proinsuline comprenant une séquence auxiliaire améliorée |
| CN103205444A (zh) * | 2013-03-21 | 2013-07-17 | 华东师范大学 | 一种人活性颗粒酶k重组蛋白的制备方法 |
| US20240011000A1 (en) * | 2020-09-15 | 2024-01-11 | Board Of Regents, The University Of Texas System | Recombinant proteins with increased solubility and stability |
Family Cites Families (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5618697A (en) * | 1982-12-10 | 1997-04-08 | Novo Nordisk A/S | Process for preparing a desired protein |
| US4861868A (en) * | 1985-02-22 | 1989-08-29 | Monsanto Company | Production of proteins in procaryotes |
| US5013662A (en) * | 1985-09-20 | 1991-05-07 | Cetus Corporation | Bacterial methionine n-terminal peptidase |
| US5126249A (en) * | 1989-05-09 | 1992-06-30 | Eli Lilly And Company | Enzymatic removal of a protein amino-terminal sequence |
| EP0535059B1 (fr) * | 1990-06-22 | 1995-11-29 | Jens LÜDEMANN | Sequence d'adn pour une protease de serine et objets s'y rapportant |
| WO1997042306A1 (fr) * | 1996-05-08 | 1997-11-13 | Eli Lilly And Company | Dipeptidylaminopeptidase 1 bovine |
-
1999
- 1999-09-09 DE DE19943177A patent/DE19943177C2/de not_active Expired - Fee Related
-
2000
- 2000-09-08 CA CA002403330A patent/CA2403330A1/fr not_active Abandoned
- 2000-09-08 EP EP00964151A patent/EP1214428A1/fr not_active Withdrawn
- 2000-09-08 JP JP2001521751A patent/JP2003529330A/ja not_active Withdrawn
- 2000-09-08 WO PCT/EP2000/008803 patent/WO2001018215A1/fr not_active Ceased
-
2002
- 2002-03-08 US US10/093,944 patent/US20020192754A1/en not_active Abandoned
Non-Patent Citations (1)
| Title |
|---|
| See references of WO0118215A1 * |
Also Published As
| Publication number | Publication date |
|---|---|
| US20020192754A1 (en) | 2002-12-19 |
| WO2001018215A1 (fr) | 2001-03-15 |
| DE19943177A1 (de) | 2001-04-05 |
| CA2403330A1 (fr) | 2001-03-15 |
| DE19943177C2 (de) | 2002-10-24 |
| JP2003529330A (ja) | 2003-10-07 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| Wilharm et al. | Generation of catalytically active granzyme K from Escherichia coli inclusion bodies and identification of efficient granzyme K inhibitors in human plasma | |
| US5512459A (en) | Enzymatic method for modification or recombinant polypeptides | |
| Walker et al. | Crystal structure of the cysteine protease interleukin-1β-converting enzyme: a (p20/p10) 2 homodimer | |
| Talanian et al. | Substrate specificities of caspase family proteases | |
| DE69131834T2 (de) | Serinproteasevarianten mit peptidligase aktivität | |
| Mayer et al. | Sites of nidogen cleavage by proteases involved in tissue homeostasis and remodelling | |
| DE68923298T2 (de) | Gewebe-plasminogenaktivator mit zymogenen oder fibrinspezifischen eigenschaften. | |
| US5719021A (en) | Protein activation | |
| WO1998038318A1 (fr) | Mutants du facteur x a deletion d'acides amines et analogues desdits mutants | |
| EP0775750A2 (fr) | Préparation de protéines à partir de pro-protéines avec des protéines de fusion dérivés de furin ou d'analogues de furin | |
| EP1214428A1 (fr) | Procede de fabrication de serine-proteases actives et de variants inactifs | |
| CA2139127A1 (fr) | Compositions permettant d'inhiber la formation d'hormones proteiques et leur utilisation | |
| EP0917566A1 (fr) | Proteases recombinees de coagulation sanguine | |
| DE3852625T2 (de) | Vektoren und Verbindungen zur Expression von Zymogen-Formen von menschlichem Protein C. | |
| DE60315014T2 (de) | Verfahren zur herstellung sequenzspezifischer proteasen durch gezielte evolution | |
| EP1012307A1 (fr) | Precurseurs zymogenes de proteases activables par voie autocatalytique et leur utilisation | |
| DE69321134T2 (de) | Plasminogen-derivate die durch thrombin aktivierbar sind | |
| EP1169461B1 (fr) | Utilisation de procarboxypeptidase B pancréatique pour la production d'insuline | |
| DE69105121T2 (de) | Gewebeplasminogenaktivator mit fibrin-spezifischen eigenschaften. | |
| US5962633A (en) | Cytotoxic T-lymphocyte antigen as cysteine protease inhibitor | |
| WO1996001312A1 (fr) | Derives activateurs du plasminogene non glucosyles et leur utilisation en cas de risque eleve d'hemorragie | |
| KR20110086711A (ko) | 봉입체 형성 단백질의 제조방법 | |
| EP0927764B1 (fr) | Serine protéases chimériques | |
| CN100392079C (zh) | 蛋白c或活化的蛋白c-样分子 | |
| Tao et al. | Template‐assisted rational design of peptide inhibitors of furin using the lysine fragment of the mung bean trypsin inhibitor |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| PUAI | Public reference made under article 153(3) epc to a published international application that has entered the european phase |
Free format text: ORIGINAL CODE: 0009012 |
|
| 17P | Request for examination filed |
Effective date: 20020404 |
|
| AK | Designated contracting states |
Kind code of ref document: A1 Designated state(s): AT BE CH CY DE DK ES FI FR GB GR IE IT LI LU MC NL PT SE |
|
| 17Q | First examination report despatched |
Effective date: 20030805 |
|
| STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN |
|
| 18D | Application deemed to be withdrawn |
Effective date: 20031216 |