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EP0904286A4 - Clivage invasif d'acides nucleiques - Google Patents

Clivage invasif d'acides nucleiques

Info

Publication number
EP0904286A4
EP0904286A4 EP97903931A EP97903931A EP0904286A4 EP 0904286 A4 EP0904286 A4 EP 0904286A4 EP 97903931 A EP97903931 A EP 97903931A EP 97903931 A EP97903931 A EP 97903931A EP 0904286 A4 EP0904286 A4 EP 0904286A4
Authority
EP
European Patent Office
Prior art keywords
nucleic acid
specific
present
acid sequences
nucleic acids
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP97903931A
Other languages
German (de)
English (en)
Other versions
EP0904286A1 (fr
Inventor
Jeff G Hall
Victor I Lyamichev
James R Prudent
Mary Ann D Brow
Michael W Kaiser
Natasha Lyamichev
David Michael Olive
James E Dahlberg
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Third Wave Technologies Inc
Original Assignee
Third Wave Technologies Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US08/599,491 external-priority patent/US5846717A/en
Priority claimed from US08/756,386 external-priority patent/US5985557A/en
Priority claimed from US08/758,314 external-priority patent/US6090606A/en
Application filed by Third Wave Technologies Inc filed Critical Third Wave Technologies Inc
Priority to EP10179329A priority Critical patent/EP2354252B1/fr
Priority to EP08020055A priority patent/EP2058407B1/fr
Priority to EP05016686A priority patent/EP1634890B1/fr
Publication of EP0904286A1 publication Critical patent/EP0904286A1/fr
Publication of EP0904286A4 publication Critical patent/EP0904286A4/fr
Withdrawn legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6823Release of bound markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Enzymes And Modification Thereof (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
EP97903931A 1996-01-24 1997-01-22 Clivage invasif d'acides nucleiques Withdrawn EP0904286A4 (fr)

Priority Applications (3)

Application Number Priority Date Filing Date Title
EP10179329A EP2354252B1 (fr) 1996-01-24 1997-01-22 Division invasive d'acides nucléiques
EP08020055A EP2058407B1 (fr) 1996-01-24 1997-01-22 Division invasive d'acides nucléiques
EP05016686A EP1634890B1 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucléiques

Applications Claiming Priority (11)

Application Number Priority Date Filing Date Title
US599491 1990-10-17
US08/599,491 US5846717A (en) 1996-01-24 1996-01-24 Detection of nucleic acid sequences by invader-directed cleavage
US682853 1996-07-12
US08/682,853 US6001567A (en) 1996-01-24 1996-07-12 Detection of nucleic acid sequences by invader-directed cleavage
US08/756,386 US5985557A (en) 1996-01-24 1996-11-29 Invasive cleavage of nucleic acids
US756386 1996-11-29
US759038 1996-12-02
US758314 1996-12-02
US08/759,038 US6090543A (en) 1996-01-24 1996-12-02 Cleavage of nucleic acids
US08/758,314 US6090606A (en) 1996-01-24 1996-12-02 Cleavage agents
PCT/US1997/001072 WO1997027214A1 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucleiques

Related Child Applications (1)

Application Number Title Priority Date Filing Date
EP05016686A Division EP1634890B1 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucléiques

Publications (2)

Publication Number Publication Date
EP0904286A1 EP0904286A1 (fr) 1999-03-31
EP0904286A4 true EP0904286A4 (fr) 2004-01-14

Family

ID=27541970

Family Applications (2)

Application Number Title Priority Date Filing Date
EP97903931A Withdrawn EP0904286A4 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucleiques
EP05016686A Expired - Lifetime EP1634890B1 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucléiques

Family Applications After (1)

Application Number Title Priority Date Filing Date
EP05016686A Expired - Lifetime EP1634890B1 (fr) 1996-01-24 1997-01-22 Clivage invasif d'acides nucléiques

Country Status (8)

Country Link
EP (2) EP0904286A4 (fr)
JP (2) JP3665648B2 (fr)
AT (1) ATE414793T1 (fr)
AU (1) AU731062B2 (fr)
CA (1) CA2243353C (fr)
DK (1) DK1634890T3 (fr)
ES (1) ES2317113T3 (fr)
WO (1) WO1997027214A1 (fr)

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US7150982B2 (en) 1991-09-09 2006-12-19 Third Wave Technologies, Inc. RNA detection assays
US5994069A (en) * 1996-01-24 1999-11-30 Third Wave Technologies, Inc. Detection of nucleic acids by multiple sequential invasive cleavages
US6759226B1 (en) 2000-05-24 2004-07-06 Third Wave Technologies, Inc. Enzymes for the detection of specific nucleic acid sequences
US7527928B2 (en) 1996-11-29 2009-05-05 Third Wave Technologies, Inc. Reactions on a solid surface
US6913881B1 (en) 1996-01-24 2005-07-05 Third Wave Technologies, Inc. Methods and compositions for detecting target sequences
AU781188B2 (en) * 1996-01-24 2005-05-12 Third Wave Technologies, Inc. Detection of nucleic acids by multiple sequential invasive cleavages
US7432048B2 (en) 1996-11-29 2008-10-07 Third Wave Technologies, Inc. Reactions on a solid surface
US6780982B2 (en) 1996-07-12 2004-08-24 Third Wave Technologies, Inc. Charge tags and the separation of nucleic acid molecules
ATE530652T1 (de) * 1996-11-29 2011-11-15 Third Wave Tech Inc Fen-1-endonucleasen, mischungen und spaltungsverfahren
US7101672B2 (en) 1998-05-05 2006-09-05 Third Wave Technologies, Inc. Target-dependent reactions using structure-bridging oligonucleotides
CA2289872C (fr) 1997-05-05 2007-07-31 Third Wave Technologies, Inc. Reactions dependant de la cible faisant appel a des oligonucleotides formant des ponts avec des structures
US6210880B1 (en) 1997-09-19 2001-04-03 Third Wave Technologies, Inc. Polymorphism analysis by nucleic acid structure probing with structure-bridging oligonucleotides
US6194149B1 (en) 1998-03-03 2001-02-27 Third Wave Technologies, Inc. Target-dependent reactions using structure-bridging oligonucleotides
US6251638B1 (en) 1997-05-30 2001-06-26 Diagen Corporation Methods for detection of nucleic acid sequences in urine
US8182991B1 (en) 1997-11-26 2012-05-22 Third Wave Technologies, Inc. FEN-1 endonucleases, mixtures and cleavage methods
US7118860B2 (en) 1999-10-29 2006-10-10 Stratagene California Methods for detection of a target nucleic acid by capture
US6528254B1 (en) * 1999-10-29 2003-03-04 Stratagene Methods for detection of a target nucleic acid sequence
US7824859B2 (en) 1999-10-29 2010-11-02 Cytyc Corporation Methods for detection of a target nucleic acid by forming a cleavage structure using an RNA polymerase
US7838225B2 (en) 1999-10-29 2010-11-23 Hologic, Inc. Methods for detection of a target nucleic acid by forming a cleavage structure using a reverse transcriptase
US6964848B2 (en) 2000-03-27 2005-11-15 Applera Corporation Invasion assay
CA2410072C (fr) * 2000-05-24 2011-07-19 Third Wave Technologies, Inc. Agents de clivage et polymerases, et methode de detection connexe de l'arn
AU2001268513A1 (en) 2000-06-17 2002-01-02 Third Wave Technologies, Inc. Nucleic acid accessible hybridization sites
CA2415125A1 (fr) 2000-07-03 2002-01-10 Applera Corporation Titrage de sequences polynucleotidiques
EP1341929A2 (fr) * 2000-11-15 2003-09-10 Third Wave Technologies, Inc. Endonucleases fen
JP3681729B2 (ja) * 2001-02-15 2005-08-10 タカラバイオ株式会社 塩基置換の検出方法
US7303869B2 (en) 2001-07-17 2007-12-04 Northwestern University Solid-phase reactions
US7485443B2 (en) 2001-07-17 2009-02-03 Northwestern University Solid-phase reactions
US20040014067A1 (en) 2001-10-12 2004-01-22 Third Wave Technologies, Inc. Amplification methods and compositions
GB0205455D0 (en) 2002-03-07 2002-04-24 Molecular Sensing Plc Nucleic acid probes, their synthesis and use
US7312033B2 (en) 2002-11-14 2007-12-25 Third Wave Technologies, Inc. CFTR allele detection assays
US8206904B2 (en) 2002-12-18 2012-06-26 Third Wave Technologies, Inc. Detection of nucleic acids
CA2510381C (fr) 2002-12-18 2014-07-08 Third Wave Technologies, Inc. Detection de petits acides nucleiques
US7297780B2 (en) 2003-01-06 2007-11-20 Third Wave Technologies, Inc. Reactive functional groups for preparation of modified nucleic acid
US7700750B2 (en) 2003-01-09 2010-04-20 Third Wave Technologies, Inc. Connexin allele detection assays
US20040161749A1 (en) 2003-01-24 2004-08-19 Hall Jeff G. 3' end tagged oligonucleotides
EP1716250B1 (fr) 2004-01-07 2015-08-05 Third Wave Technologies, Inc. Determination d'un genotype du virus de l'hepatite c
US7462451B2 (en) 2004-04-26 2008-12-09 Third Wave Technologies, Inc. Compositions for modifying nucleic acids
US7727721B2 (en) 2005-03-08 2010-06-01 California Institute Of Technology Hybridization chain reaction amplification for in situ imaging
US7939257B2 (en) 2005-05-12 2011-05-10 Third Wave Technologies, Inc. Polymorphic GHSR nucleic acids and uses thereof
ATE526975T1 (de) 2005-10-07 2011-10-15 California Inst Of Techn Pkr-aktivierung mittels hybridisierungskettenreaktion
US7482127B2 (en) 2005-11-03 2009-01-27 Third Wave Technologies, Inc. Nucleic acid detection assays employing blocker oligonucleotides
US7674924B2 (en) 2006-05-22 2010-03-09 Third Wave Technologies, Inc. Compositions, probes, and conjugates and uses thereof
CN101541975B (zh) 2006-06-01 2013-04-03 第三次浪潮技术公司 核酸的检测
US7759062B2 (en) 2006-06-09 2010-07-20 Third Wave Technologies, Inc. T-structure invasive cleavage assays, consistent nucleic acid dispensing, and low level target nucleic acid detection
AU2007307171B2 (en) 2006-10-04 2012-01-19 Third Wave Technologies, Inc. Snap-back primers and detectable hairpin structures
WO2008144562A1 (fr) 2007-05-16 2008-11-27 California Institute Of Technology Motif polyvalent d'acide nucléique en épingle à cheveux pour la programmation de voies d'auto-assemblage biomoléculaire
US8190371B2 (en) 2007-09-07 2012-05-29 Third Wave Technologies, Inc. Methods and applications for target quantification
US8497364B2 (en) 2008-02-27 2013-07-30 California Institute Of Technology Triggered RNAi
KR101419980B1 (ko) 2008-03-15 2014-07-15 홀로직, 인크. 증폭 반응 도중에 핵산 분자를 분석하기 위한 조성물 및 방법
EP2853601B1 (fr) 2008-07-18 2016-09-21 TrovaGene, Inc. Procédés de détection à base de PCR de séquences d'acide nucléique ultracourt
US8658780B2 (en) 2010-05-18 2014-02-25 California Institute Of Technology Triggered covalent probes for imaging and silencing genetic expression
US9834439B2 (en) 2010-07-20 2017-12-05 California Institute Of Technology Biomolecular self-assembly
US8877438B2 (en) 2010-07-20 2014-11-04 California Institute Of Technology Self-assembled polynucleotide structure
US8962241B2 (en) 2010-07-20 2015-02-24 California Institute Of Technology Triggered molecular geometry based bioimaging probes
US20140349858A1 (en) 2011-12-22 2014-11-27 Ibis Bioscience, Inc. Amplification of a sequence from a ribonucleic acid
CA2877236C (fr) * 2012-06-20 2021-03-09 Toray Industries, Inc. Procede de detection d'un acide nucleique et kit de detection afferent
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US9856472B2 (en) 2013-07-01 2018-01-02 California Institute Of Technology Small conditional RNAs
JP6688318B2 (ja) 2015-05-01 2020-04-28 ジェン−プローブ・インコーポレーテッド 多重侵入切断アッセイ
CA3029625A1 (fr) 2016-07-05 2018-01-11 California Institute Of Technology Reaction en chaine d'hybridation d'initiateurs fractionnaire
US10815519B2 (en) 2016-08-30 2020-10-27 California Institute Of Technology Immunohistochemistry via hybridization chain reaction
CN111032209A (zh) 2017-07-10 2020-04-17 简·探针公司 分析系统和方法
EP4219766A3 (fr) 2017-08-11 2023-10-11 Gen-Probe Incorporated Compositions et procédés de détection de staphylococcus aureus
US11662281B2 (en) 2017-12-13 2023-05-30 Gen-Probe Incorporated Compositions and methods for biological sample processing
US12110540B2 (en) 2017-12-15 2024-10-08 Gen-Probe Incorporated Compositions and methods for detecting toxigenic Clostridium difficile
CN111902213B (zh) 2018-01-29 2022-12-06 简·探针公司 分析系统和方法
US20210317515A1 (en) 2018-07-10 2021-10-14 Gen-Probe Incorporated Methods and systems for detecting and quantifying nucleic acids
WO2020142347A2 (fr) 2018-12-31 2020-07-09 Gen-Probe Incorporated Systèmes et procédés de remplissage de cartouches à puits multiples avec des réactifs solides
AU2020210753A1 (en) 2019-01-25 2021-09-02 Gen-Probe Incorporated Detection of drug-resistant mycoplasma genitalium
CA3176703C (fr) 2019-05-03 2025-10-14 Gen-Probe Incorporated Systeme de transport de receptacle pour systeme analytique
CN111172164B (zh) * 2020-03-09 2022-11-15 中国药科大学 一种用于任意核酸编辑的组合物及方法
CA3177256A1 (fr) 2020-10-21 2022-04-28 Gen-Probe Incorporated Systeme de gestion de conteneurs de fluide
WO2022164796A1 (fr) 2021-01-26 2022-08-04 California Institute Of Technology Arn guides conditionnels allostériques pour la régulation sélective de cellules de crispr/cas
CN113774141B (zh) * 2021-09-30 2024-02-27 重庆大学 一种用于双位点顺反式突变检测的引物、探针组合物及其应用
WO2023200406A2 (fr) * 2022-04-14 2023-10-19 National University Of Singapore Procédé de détection d'un analyte polynucléotidique
WO2024054924A1 (fr) 2022-09-08 2024-03-14 Gen-Probe Incorporated Procédé de détection d'analytes d'acides nucléiques à l'aide d'amorces à double spécificité

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WO1994029482A1 (fr) * 1993-06-04 1994-12-22 Third Wave Technologies, Inc. Nucleases 5' derivees d'adn-polymerase d'adn thermostable

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WO1994029482A1 (fr) * 1993-06-04 1994-12-22 Third Wave Technologies, Inc. Nucleases 5' derivees d'adn-polymerase d'adn thermostable

Also Published As

Publication number Publication date
JP3665648B2 (ja) 2005-06-29
CA2243353A1 (fr) 1997-07-31
ES2317113T3 (es) 2009-04-16
AU1836497A (en) 1997-08-20
WO1997027214A1 (fr) 1997-07-31
DK1634890T3 (da) 2009-03-09
JP2002515737A (ja) 2002-05-28
ATE414793T1 (de) 2008-12-15
CA2243353C (fr) 2010-03-30
EP0904286A1 (fr) 1999-03-31
EP1634890A1 (fr) 2006-03-15
AU731062B2 (en) 2001-03-22
JP4295715B2 (ja) 2009-07-15
EP1634890B1 (fr) 2008-11-19
JP2005160481A (ja) 2005-06-23

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