Detailed Description
In order to make the objects, technical solutions and advantages of the present invention more apparent, the present invention is further described in detail below with reference to examples, and the equipment and reagents used in the examples and test examples are commercially available without specific reference. The specific embodiments described herein are merely illustrative of the invention and are not intended to be limiting.
The invention discloses an allene oxide synthase gene CsAOS, and a coding protein and application thereof, which are shown in the following embodiments. The nucleotide sequence of the allene oxide synthetase gene CsAOS is shown as SEQ ID NO.1 in a sequence table, and the amino acid sequence is shown as SEQ ID NO.2 in the sequence table.
The materials involved in the invention:
1. tea tree samples: the Shucha early tea tree is planted in the agricultural industrial park of Yihui agricultural university of Yihui, Luyang area of Anhui province, and the leaf picking condition is 25-28 ℃.
The preparation process of the black tea mainly comprises the steps of picking, withering, rolling, fermenting and drying. The method specifically comprises the following steps: picking one bud and one leaf of Shucha early plant (in this case, a fresh leaf sample); spreading at room temperature for about 16h (withering sample after completion); firstly, lightly kneading tea leaves into a spherical shape, then heavily kneading and lightly kneading (a kneading sample is obtained after the completion); wrapping the tea leaves with gauze, fermenting at 30 deg.C for 12h (fermentation sample after completion), dispersing every 2h during fermentation period, and continuing fermentation; drying at 110 ℃ for about 15min (drying samples after completion).
Tobacco sample: the Nicotiana benthamiana (Nicotiana benthamiana) is grown in a light culture chamber at a temperature of 22-25 ℃.
2. Coli: DH5 α.
3. Carrier: pGEM-T Easy.
4. LB culture medium: weighing 10g of NaCl, 5g of yeast extract and 10g of tryptone, adding 950mL of ultrapure water, stirring and dissolving, adding water to a constant volume of 1000mL, and sterilizing for 15min by high-pressure steam to obtain an LB liquid culture medium, wherein the LB solid culture medium is obtained by adding 15g of agar powder into the LB liquid culture medium.
5. Ampicillin mother liquor (Amp +, 50 mg/ml): 0.5g ampicillin Amp was weighed, dissolved in 10mL sterile water, filtered, sterilized, and dispensed into vials for storage at-20 ℃.
6. In vitro oligonucleotide antisense inhibition buffer: centrifuging nucleotide powder (8000rpm,5min), adding 2ml of 50mMol/L sucrose solution into each tube, shaking on a vortex apparatus for several minutes, observing whether the powder is completely dissolved, stopping shaking if no particulate matter is found, obtaining in-vitro oligonucleotide antisense inhibition buffer solution (hereinafter referred to as buffer solution), transferring 250ul of buffer solution by using a liquid transfer gun, and subpackaging in a 96-well plate for later use.
Example 1 expression differences of allene oxide synthase Gene CsAOS in different tissues of Shuchazao, different tea plant varieties and during Black tea processing
1. Expression difference of allene oxide synthetase gene CsAOS in different tissues of Shuchazao
Respectively picking the roots, stems, flowers, fruits, buds, one leaf, two leaves and three leaves of Shucha early plants, and detecting the expression quantity of an allene oxide synthase gene CsAOS in each sample by adopting a high-throughput sequencing method.
2. Expression difference of allene oxide synthetase gene CsAOS in black tea processing process
Samples of black tea during picking, withering, rolling, fermentation and drying periods are respectively taken, cDNA is obtained according to the method in example 3, and fluorescent quantitative PCR detection is carried out, wherein the method comprises the following steps, and high-throughput sequencing is adopted for verification.
A forward primer: ACCTCCTTCTAAACCCACCAATC
Reverse primer: ACCAGGTGGCATGTTGGCTCTG
3. Expression differences of CsAOS of different adaptive tea tree varieties
Collecting three leaves of different tea tree varieties with adaptability, and detecting the expression quantity of allene oxide synthetase gene CsAOS in each sample by a high-throughput sequencing method.
Test results and analysis:
in FIG. 2, the expression difference of the allene oxide synthase gene CsAOS in different tissues of Shuchazao, which is higher in leaves and flowers, is shown, indicating that it has corresponding functions in these tissues.
In fig. 3, it can be seen that the expression difference of allene oxide synthase gene CsAOS during black tea processing, transcriptome data and quantitative PCR data indicate that the expression level of the gene is gradually increased from withering to fermentation, which indicates that the withering, rolling and fermentation of black tea processing promote the expression of the gene, and that the gene is involved in the black tea manufacturing process.
FIG. 4 is the expression of CsAOS in different adapted tea varieties according to an embodiment of the invention. As a result, it was found that CsAOS is expressed in a significantly higher amount in most of the varieties of tea suitable for making black tea and black tea than in the varieties of tea suitable for making green tea. Therefore, the expression level of the CsAOS gene can be used as a parameter for judging the tea plant variety to be suitable for preparing green tea and black tea.
Example 2 in vitro oligonucleotide antisense inhibition experiments
1. Designing and synthesizing oligonucleotide antisense primer according to AOS predicted sequence, and designing on websitehttp:// sfold.wadsworth.org/cgi-bin/soligo.plThe above was accomplished by the following primer sequences:
asODN001041-1 CTGTTGAGTGGTATTTTTCG
asODN001041-2 GTTGGGAGTGGAGTTTGGCT
asODN001041-3 GGGGTCCAGATAGGAGAGGA
asODN001041-4 GTATTGTGATGGCACGGGCG
2. dissolving with 80mM sucrose solution to obtain inhibition buffer solution, wherein the blank is sucrose solution;
3. a pair of bud and two leaves with basically consistent size, bright color, healthy color and no insect and disease are cut by scissors and inserted into a 96-well plate filled with buffer solution, and the tail of the bud and two leaves is ensured to be immersed into the buffer solution.
4. And putting the 96-well plate into a light incubator, and performing light culture according to the light intensity of 16 h/dark 8h, wherein the temperature of the incubator is 28 ℃.
5. And taking a treated 3d primer treatment sample and a blank sample.
Test results and analysis:
in fig. 5, it can be seen that the expression level of allene oxide synthase gene CsAOS in the antisense inhibition experiment of oligonucleotide in vitro is significantly inhibited compared with the control, and the inhibition rate is close to 2/3.
In FIG. 6, it can be seen that the jasmonic acid substances are measured after 3 days of antisense inhibition by the oligonucleotide in vitro, and it can be seen that the inhibition of CsAOS expression can significantly reduce the contents of jasmonic acid precursor OPDA and jasmonic acid substances JA, JA-Ile, etc. JA was reduced by more than 50% compared to control; and simultaneously, the content of the salicylic acid SA can be reduced.
In FIG. 7, the results of the volatiles measurements after 3 days of the in vitro oligonucleotide antisense inhibition experiments can be seen, which indicated that the in vitro inhibition of CsAOS was increased by about 18-fold and about 8-fold for heptanal, hexanal, 2-hexenal, 2, 4-hexadienal, 2-hexen-1-ol acetate, 2-ethylhexanol, benzyl alcohol, linalool, phenethyl alcohol, nonenal, nonanol, geraniol, 3-hexenyl ester hexanoic acid, 3-hexenyl ester, hexanoic acid-hexyl ester, especially hexanal, 2-hexenal, compared to the control.
Example 3 cloning and in vitro transient expression of the allene oxide synthase CsAOS Gene
1. Designing a specific primer, wherein a drawn part is a restriction enzyme cutting site, and the primer sequence is shown as SEQ ID NO.3 and SEQ ID NO. 4:
SEQ ID NO.3:TGGATCCATGGCTTTTACTTCTCTAGC BamH1
SEQ ID NO.4:CAAGCTTTCAAAAACTAGCTCTCTTGACG Hind3
2. extracting total RNA of the tea tree sample according to the instructions of the plant total RNA extraction kit and the first-strand cDNA synthesis kit, and performing reverse transcription to obtain cDNA.
3. And (3) taking the reverse transcription cDNA as a template, and amplifying by using the specific primer, wherein a PCR system comprises: 2. mu.l of forward primer, 2. mu.l of reverse primer, 2. mu.l of template, MIX 25. mu.l, ddH2O19 microliters; PCR procedure: the first step is as follows: the temperature is maintained at 94 ℃ for 5 min. The amplification procedure is pre-denaturation at 98 ℃ for 10s, annealing at 57 ℃ for 30s, extension at 68 ℃ for 1min, 35 cycles, and extension at 68 ℃ for 5min, and the obtained PCR product is stored at 4 ℃.
4. The PCR product was purified using a PCR purification kit and ligated into pGEM-T Easy followed by transformation of DH 5. alpha. for colony PCR, running gel and sequencing verification as follows. Obtaining positive colonies, obtaining a T vector (CsAOS-pGEM) containing the CsAOS gene, and obtaining the DH5 alpha escherichia coli containing the allene oxide synthetase gene CsAOS sequence.
Connection conditions are as follows: ligation was performed overnight at 4 ℃.
Transformation system:
adding the obtained ligation product into 50 mu L DH5 alpha, gently mixing uniformly, placing in ice, and carrying out ice bath for 30 min; thermally shocking at 42 deg.C in water bath for 45sec, immediately placing in ice, and ice-cooling for 3 min; adding 1mL of fresh LB culture medium, and carrying out shaking culture at 37 ℃ and 200rpm for 1 h; the cultured bacteria liquid is centrifuged, 300 mu L of supernatant is reserved, and the supernatant is re-suspended and mixed evenly, plated and cultured overnight at 37 ℃.
5. Designing a specific primer, wherein the primer sequence is shown as follows:
F:GGGGACAAGTTTGTACAAAAAAGCAGGCTTCATGGCTTTTACTTCTCTAGC
R:GGGGACCACTTTGTACAAGAAAGCTGGGTTCAAAAACTAGCTCTCTTGACG
6. and (3) using the CsAOS-pGEM obtained in the step (4) as a template, using the primer obtained in the step (5) for amplification, and sequentially carrying out PCR verification, gel running verification and sequencing verification by using a homologous recombination method (Gateway technology) to construct the CsAOS-PB2GW 7. The fusion vector has a strong 35S promoter, and CsAOS-PB2GW7 is transferred into agrobacterium GV3101 by a freezing transformation method.
Transient expression of target genes
1. The recombinant strain CsAOS-PB2GW7 GV3101 and the control GV3101 obtained in the examples were selected and inoculated into 5ml of LB liquid medium (100ug/ml gentamicin, 50ug/ml spectinomycin), and shake-cultured at 28 ℃.
2.1 ml of overnight cultured Agrobacterium was transferred to 25ml of LB liquid medium (with the same antibiotic as1 added, additionally autoclaved acetosyringone added).
3. The OD600 value of the overnight culture broth was measured.
4.5000g, 15min for collection, and the cells were resuspended in a resuspension solution (10mM MgCl2,10mM 2- (N-morpholino) ethanesulfonic acid (pH5.6), 100uM acetosyringone) to give a final OD600 of 0.4.
5. Standing at room temperature for 2-3 hr, and injecting tobacco.
6. The infesting solution was filled into a 5ml syringe and the liquid was injected into tobacco leaves from the lower skin of the leaf (no cotyledons were used) by pressing the syringe back plate with the thumb. After injection, tobacco leaves are wet.
7. 3 days after injection, the injection leaves were removed for volatile and jasmonic analysis.
Test results and analysis:
in FIG. 8, the expression level of the allene oxide synthase gene CsAOS transiently expressed in vitro can be seen, and the results show that the expression level of CsAOS in transiently expressed tobacco is increased by 9 times.
FIG. 9 shows the results of jasmonates assay after 3d in vitro transient expression according to an embodiment of the invention. The results show that the content of jasmonates is obviously increased after transient expression, such as the content of JA and MeJA is increased by about 20 percent and 29 percent respectively.
Detection method related to the present invention
Volatile determination of in vitro oligonucleotide antisense inhibition samples:
1. determination of volatile matter is performed by using a headspace solid-phase microextraction (HS-SPME) method combined with a gas-phase mass spectrometry (GC-MS) (Agilent 7890A), extracting volatile matters of in-vitro oligonucleotide antisense inhibition samples and blank samples by using an extraction head containing 50/30um DVB/CAR/PDMS (Supelco), extracting at 60 ℃ for 1h, then taking out the extraction head, inserting the extraction head into a GC-MS sample inlet, desorbing for 5min, and starting an instrument to collect data.
2. GC-MS detection conditions
Chromatographic conditions are as follows: the temperature of a sample inlet is 240 ℃, the carrier gas is high-purity nitrogen, the purity is more than 99.99 percent, the flow rate is 0.8ml/min, and split-flow sample injection is not carried out; the chromatographic column model is HP-5MS quartz capillary column (60m × 0.32mm × 0.25 um); the column temperature is initially 40 deg.C, held for 3min, ramped to 90 deg.C at 2 deg.C/min, held for 5min, ramped to 160 deg.C at 3 deg.C/min, ramped to 250 deg.C at 10 deg.C/min, and held for 5 min.
Mass spectrum conditions: the ion source is an EI source, the temperature of the ion source is 230 ℃, the electron energy is 70eV, the temperature of a quadrupole rod is 150 ℃, the interface temperature is 280 ℃, the voltage of an electron multiplier is 1680V, and the scanning range m/z is 35-350 amu.
Determination of jasmonates:
the samples were ground to a powder in liquid nitrogen and extracted in the dark as follows.
Preparing an extraction buffer solution formula, wherein methanol: ddH2Acetic acid 80:19:1(V: V). Weighing about 0.1g of sample into a 2ml centrifuge tube, adding 750 μ l of the extract, mixing by inversion, and placing on ice, wherein the process is carried out under the condition of keeping out the light. Then carrying out rotary extraction for more than 16h at 4 ℃ under the condition of keeping out of the light. Centrifuging at 13000rpm for 10min at 4 deg.C, sucking supernatant, adding 750 μ l of extractive solution again, extracting at 4 deg.C in dark for more than 16h, centrifuging, and mixing the two supernatants. Filtering with 0.22um filter membrane (organic filter membrane), blowing with nitrogen gas, adding 200 μ l methanol, reversing for several times, and dissolving at 4 deg.C for 3-6 h. (this process was carried out under exclusion of light). After the lysate was centrifuged at 13000rpm for 15min at 4 ℃, 180. mu.l of the supernatant was gently aspirated into the inner cannula, and placed in a sample bottle dedicated to mass spectrometry for waiting for detection by the machine.
The hormone samples were analyzed by LC-MS, the liquid chromatograph is Shimadzu LC-20AD type, and the quantitative analysis was performed by external standard method.
The detection method comprises the following steps:
the liquid chromatography adopts a binary solvent system, and the mobile phase: the solution A was methanol, the solution B was 0.05% aqueous formic acid, and an Eclipse plus C18(5 μm,2.1 × 150mm) column was selected, the flow rate was controlled at 300uL/min, the column temperature was 30 ℃ and 10 μ L was injected per sample. Gradient elution was used with a gradient of 10% methanol starting and held for 2min, increasing gradually to 90% for 5min at 10 min. At 15.1min, methanol dropped to the initial gradient and was held for 7 min.
TABLE 1 liquid phase elution conditions for phytohormones
The mass spectrum conditions are as follows: the ion source is an electrospray ion source (ESI), the voltage of the ion source is-4.5 KV, the temperature of the ion source is 500 ℃, N2 is used as auxiliary heating gas2(50psi), atomizing gas1(60psi) and air curtain gas (30psi), and the object to be detected is in a negative ion mode. The standard mixture was separated in reverse phase liquid chromatography and quantitatively analyzed in tandem triple quadrupole mass spectrometry multiple reaction detection (MRM) mode with a scan time of 50 ms.
The above description is only for the purpose of illustrating the preferred embodiments of the present invention and is not to be construed as limiting the invention, and any modifications, equivalents and improvements made within the spirit and principle of the present invention are intended to be included within the scope of the present invention.
Sequence listing
<110> agriculture university of Anhui
<120> allene oxide synthetase, coding gene CsAOS and application thereof
<140> 2020104074103
<141> 2020-05-14
<160> 4
<170> SIPOSequenceListing 1.0
<210> 1
<211> 1572
<212> DNA
<213> nucleotide sequence (CsAOS)
<400> 1
atggctttta cttctctagc tttgccttcc ctgcaactac aattcttgac acaacggcct 60
ccaaaagtat catcaaaacc atactcaatt caccacccaa tctatgcttc cgtatccgaa 120
agaccatctg cgccacctcc tccggcgacg ccgaaaatga aacctccttc taaacccacc 180
aatcttccca ttcagaaaat cccaggaaac tatggccctc ccttaattgg tcccatcaaa 240
gacagactcg actacttcta caaccaaggc acagtcgaat tcttcaagtc tcgaagcgaa 300
aaataccact caacagtttt cagagccaac atgccacctg gtcccttcat ttcctccaac 360
cccaacgtgg tcgttcttct ggacggcaag agcttcccag tcctcttcga cgtcacaaaa 420
gtcgaaaaga aagacctctt cacagggact ttcatgccct ccaccgaact caccggtggt 480
taccgagtcc tctcctatct ggacccctcg gagcctaagc atgccaagct caagcaactc 540
atgttctttc tactcaaatc agggcgagac aaagtgatac cagagttcca ctcgagcttc 600
acagacctct tcgagaccct tgaagccgaa ctggcaagca aaggcaaagc agcatttagc 660
gatgccaatg accaggcttc tttcaatttc ttagctcggt cactcttcgg gaccaaccca 720
gccgatacca aactcggact cgacggaccc aatttgatag ccatatggat atttttccaa 780
ctggctcctt tgataaccct tggcctccca aagttggtgg aagagctact catccacact 840
tttcctctcc ctccagtact catcaaaaaa gactaccaaa gattgtacga ttttttctac 900
aactcgtcaa catccatcct cgacgaagcc gagaaaattg gcctctcccg cgaagaggct 960
tgccacaatc tcttattcgc cacgtgcttc aattccttcg gcggaatgaa aatctttttc 1020
cccagcatga tcaaatggat cggccatgct ggagccaaac tccactccca actcgccgag 1080
gagatccgat cagccgtcag atccagcggc gggaaagtga cgatggccgg gatggaacag 1140
atgccgttga tgaagtccgt agtgtacgaa tcgctgagga tcgacccgcc cgtgccatca 1200
caatacggtc gagcgaaacg ggacatggtg atagagtctc atgacgcagc gtttgaggtg 1260
aaagaagggg aaatgttatt tgggtaccaa ccatttgcga ctaaagatcc gaagatattc 1320
gagaggccgg aggagtttgt ggcggaccgg ttcgtcggag aggagggaga gaagatgttg 1380
aggcacgttc tgtggtcgaa tggaccggag accgagagca cgacggtggg aaacaagcaa 1440
tgcgcgggga aggacttcgt ggtgatggtg tcgaggttgt tgctggtgga gttgtttcta 1500
cgttatgatt cgtttgagac ggaggttggt tcttcagtta ctataacgtc cgtcaagaga 1560
gctagttttt ga 1572
<210> 2
<211> 523
<212> PRT
<213> amino acid sequence (CsAOS)
<400> 2
Met Ala Phe Thr Ser Leu Ala Leu Pro Ser Leu Gln Leu Gln Phe Leu
1 5 10 15
Thr Gln Arg Pro Pro Lys Val Ser Ser Lys Pro Tyr Ser Ile His His
20 25 30
Pro Ile Tyr Ala Ser Val Ser Glu Arg Pro Ser Ala Pro Pro Pro Pro
35 40 45
Ala Thr Pro Lys Met Lys Pro Pro Ser Lys Pro Thr Asn Leu Pro Ile
50 55 60
Gln Lys Ile Pro Gly Asn Tyr Gly Pro Pro Leu Ile Gly Pro Ile Lys
65 70 75 80
Asp Arg Leu Asp Tyr Phe Tyr Asn Gln Gly Thr Val Glu Phe Phe Lys
85 90 95
Ser Arg Ser Glu Lys Tyr His Ser Thr Val Phe Arg Ala Asn Met Pro
100 105 110
Pro Gly Pro Phe Ile Ser Ser Asn Pro Asn Val Val Val Leu Leu Asp
115 120 125
Gly Lys Ser Phe Pro Val Leu Phe Asp Val Thr Lys Val Glu Lys Lys
130 135 140
Asp Leu Phe Thr Gly Thr Phe Met Pro Ser Thr Glu Leu Thr Gly Gly
145 150 155 160
Tyr Arg Val Leu Ser Tyr Leu Asp Pro Ser Glu Pro Lys His Ala Lys
165 170 175
Leu Lys Gln Leu Met Phe Phe Leu Leu Lys Ser Gly Arg Asp Lys Val
180 185 190
Ile Pro Glu Phe His Ser Ser Phe Thr Asp Leu Phe Glu Thr Leu Glu
195 200 205
Ala Glu Leu Ala Ser Lys Gly Lys Ala Ala Phe Ser Asp Ala Asn Asp
210 215 220
Gln Ala Ser Phe Asn Phe Leu Ala Arg Ser Leu Phe Gly Thr Asn Pro
225 230 235 240
Ala Asp Thr Lys Leu Gly Leu Asp Gly Pro Asn Leu Ile Ala Ile Trp
245 250 255
Ile Phe Phe Gln Leu Ala Pro Leu Ile Thr Leu Gly Leu Pro Lys Leu
260 265 270
Val Glu Glu Leu Leu Ile His Thr Phe Pro Leu Pro Pro Val Leu Ile
275 280 285
Lys Lys Asp Tyr Gln Arg Leu Tyr Asp Phe Phe Tyr Asn Ser Ser Thr
290 295 300
Ser Ile Leu Asp Glu Ala Glu Lys Ile Gly Leu Ser Arg Glu Glu Ala
305 310 315 320
Cys His Asn Leu Leu Phe Ala Thr Cys Phe Asn Ser Phe Gly Gly Met
325 330 335
Lys Ile Phe Phe Pro Ser Met Ile Lys Trp Ile Gly His Ala Gly Ala
340 345 350
Lys Leu His Ser Gln Leu Ala Glu Glu Ile Arg Ser Ala Val Arg Ser
355 360 365
Ser Gly Gly Lys Val Thr Met Ala Gly Met Glu Gln Met Pro Leu Met
370 375 380
Lys Ser Val Val Tyr Glu Ser Leu Arg Ile Asp Pro Pro Val Pro Ser
385 390 395 400
Gln Tyr Gly Arg Ala Lys Arg Asp Met Val Ile Glu Ser His Asp Ala
405 410 415
Ala Phe Glu Val Lys Glu Gly Glu Met Leu Phe Gly Tyr Gln Pro Phe
420 425 430
Ala Thr Lys Asp Pro Lys Ile Phe Glu Arg Pro Glu Glu Phe Val Ala
435 440 445
Asp Arg Phe Val Gly Glu Glu Gly Glu Lys Met Leu Arg His Val Leu
450 455 460
Trp Ser Asn Gly Pro Glu Thr Glu Ser Thr Thr Val Gly Asn Lys Gln
465 470 475 480
Cys Ala Gly Lys Asp Phe Val Val Met Val Ser Arg Leu Leu Leu Val
485 490 495
Glu Leu Phe Leu Arg Tyr Asp Ser Phe Glu Thr Glu Val Gly Ser Ser
500 505 510
Val Thr Ile Thr Ser Val Lys Arg Ala Ser Phe
515 520
<210> 3
<211> 27
<212> DNA
<213> Artificial sequence (BamH1)
<400> 3
tggatccatg gcttttactt ctctagc 27
<210> 4
<211> 29
<212> DNA
<213> Artificial sequence (Hind3)
<400> 4
caagctttca aaaactagct ctcttgacg 29