CN111484942A - Method for producing adipic acid by using saccharomyces cerevisiae - Google Patents
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Abstract
Description
技术领域technical field
本发明涉及一种利用酿酒酵母生产己二酸的方法,属于生物工程领域。The invention relates to a method for producing adipic acid by utilizing Saccharomyces cerevisiae, and belongs to the field of biological engineering.
背景技术Background technique
己二酸(Adipic acid,adipate)又称肥酸,是一种重要的有机二元酸,广泛应用于化工生产、有机合成工业、医药、润滑剂制造等方面。Adipic acid (adipate), also known as fatty acid, is an important organic dibasic acid, which is widely used in chemical production, organic synthesis industry, medicine, lubricant manufacturing and so on.
目前己二酸的主要生产方式是化学合成,但是该方法的产品收率并不高。此外,在己二酸的化学合成过程中主要以苯为原料,通过化学方法合成,原料和中间产物毒性很强,而且过程中产生大量的N2O等温室气体,环境污染严重且不可持续。At present, the main production method of adipic acid is chemical synthesis, but the product yield of this method is not high. In addition, in the chemical synthesis process of adipic acid, benzene is mainly used as the raw material, and the raw materials and intermediate products are highly toxic, and a large amount of greenhouse gases such as N 2 O is generated in the process, which causes serious and unsustainable environmental pollution.
为了解决上述问题,人们将目光聚焦到生物合成己二酸的道路上,且做了大量的基础工作。目前报道的主要生物合成己二酸的方法有生物催化法和全生物合成方法。以葡萄糖为底物全生物合成己二酸具有工艺流程简单、总投入成本低、可循环利用等突出优点,因此备受研究人员青睐。目前报导主要的生物催化法主要是利用大肠杆菌作为宿主催化合成己二酸前体顺,顺-粘康酸,然后再利用金属催化剂催化合成己二酸。此外,大肠杆菌以葡萄糖为底物利用乙酰CoA和琥珀酰CoA作为底物全生物合成己二酸也达到了较高的产量。但大肠杆菌全生物合成己二酸存在着一些弊端,例如大肠杆菌属于原核生物、抗逆性较差、不耐酸、菌株遗传稳定性差,不易进行大规模工业发酵生产;另外大肠杆菌属于非食品安全菌株,其生物合成品不易运用于食品制造等领域。In order to solve the above problems, people have focused their attention on the biosynthesis of adipic acid, and a lot of basic work has been done. The main methods of biosynthesis of adipic acid currently reported include biocatalysis and total biosynthesis. The total biosynthesis of adipic acid using glucose as a substrate has outstanding advantages such as simple process flow, low total input cost, and recyclability, so it is favored by researchers. The main biocatalytic methods reported at present are mainly to use Escherichia coli as the host to catalyze the synthesis of adipic acid precursor cis, cis-muconic acid, and then use metal catalysts to catalyze the synthesis of adipic acid. In addition, Escherichia coli also achieved high yields by using acetyl-CoA and succinyl-CoA as substrates to fully biosynthesize adipic acid from glucose. However, the total biosynthesis of adipic acid by Escherichia coli has some drawbacks. For example, Escherichia coli is a prokaryotic organism, with poor stress resistance, acid intolerant, and poor genetic stability of strains, so it is not easy to carry out large-scale industrial fermentation production; in addition, Escherichia coli belongs to non-food safety strains, and their biosynthetic products are not easily used in food manufacturing and other fields.
基于以上问题,越来越多的研究者选择将酿酒酵母作为生物合成己二酸的宿主。酿酒酵母是一种最简单的真核生物,其遗传背景清晰、基因操作容易、遗传稳定性强、生命力旺盛、耐酸性和抗逆性强,并且,酿酒酵母可以生产多种类型的有机酸,并且存在着许多支持有机酸合成的内源代谢途径,并且,酿酒酵母是大规模工业发酵生产的最常用菌株之一。这使得酿酒酵母吸引了己二酸生物合成研究人员的极大的兴趣。其中,有研究人员利用酿酒酵母脂肪酸氧化法全生物合成己二酸,获得了较为理想的产量。目前,研究人员以酿酒酵母为宿主、以葡萄糖为底物从头合成己二酸有所报导,但产量较低,可能的原因是酿酒酵母宿主下以葡萄糖为底物从头合成己二酸并未找到合适的代谢途径。Based on the above problems, more and more researchers choose Saccharomyces cerevisiae as the host for the biosynthesis of adipic acid. Saccharomyces cerevisiae is the simplest eukaryotic organism with clear genetic background, easy genetic manipulation, strong genetic stability, strong vitality, strong acid resistance and stress resistance, and can produce various types of organic acids, And there are many endogenous metabolic pathways that support organic acid synthesis, and Saccharomyces cerevisiae is one of the most commonly used strains for large-scale industrial fermentation production. This has made Saccharomyces cerevisiae of great interest to researchers in adipic acid biosynthesis. Among them, some researchers used Saccharomyces cerevisiae fatty acid oxidation method to fully biosynthesize adipic acid, and obtained a relatively ideal yield. At present, researchers have reported the de novo synthesis of adipic acid using Saccharomyces cerevisiae as the host and glucose as the substrate, but the yield is low. The possible reason is that the de novo synthesis of adipic acid using glucose as the substrate under the host of Saccharomyces cerevisiae has not been found. appropriate metabolic pathways.
自然界中存在着天然的己二酸合成或分解代谢途径,其中,褐色喜热裂孢菌的3-氧代己二酰辅酶A途径可以高效的利用己二酸,同时,当生长情况良好、碳源充足时,该途径也可以积累己二酸,因此,该途径又被称之为T.fu己二酸逆降解途径。途径中涉及到的六种酶分别是:β-酮硫解酶(Tfu_0875),3-羟酰基-CoA脱氢酶(Tfu_2399),3-羟基己二酰-CoA脱氢酶(Tfu_0068),5-羧基-2-戊烯酰-CoA还原酶(Tfu_1648)和琥珀酰CoA合成酶(Tfu_2576、Tfu_2577)。然而,由于缺乏对该菌株进行基因工程改造的工具,提高己二酸的含量很困难。相比目前报导的己二酸生物合成途径,该Tfu己二酸逆降解途径的效率更高,可以以极高的得率通过葡萄糖等碳源底物生产己二酸。目前,在大肠杆菌中重构该途径,可以使己二酸的产量达到68g/L,为报导的最高值。然而,该菌株在实际生产过程中,存在如下缺陷:1、耐酸性差,菌株在pH低于5时会发生裂解;2、补料成本高:生产时须使用成本较高的葡萄糖等碳源进行发酵;3、发酵温度所需的能耗高:由于大肠杆菌所需的发酵温度为37℃,对能源的需求高。There are natural adipic acid synthesis or catabolism pathways in nature. Among them, the 3-oxoadipyl-CoA pathway of T. tanninosa can efficiently utilize adipic acid. At the same time, when the growth condition is good and the carbon When the source is sufficient, this pathway can also accumulate adipic acid, so this pathway is also called the T.fu adipic acid retrodegradation pathway. The six enzymes involved in the pathway are: β-ketothiolase (Tfu_0875), 3-hydroxyacyl-CoA dehydrogenase (Tfu_2399), 3-hydroxyadipyl-CoA dehydrogenase (Tfu_0068), 5 - Carboxy-2-pentenoyl-CoA reductase (Tfu_1648) and succinyl CoA synthase (Tfu_2576, Tfu_2577). However, boosting adipic acid was difficult due to a lack of tools to genetically engineer the strain. Compared with the currently reported adipic acid biosynthesis pathway, the Tfu adipic acid reverse degradation pathway is more efficient, and can produce adipic acid from carbon source substrates such as glucose with extremely high yields. At present, reconstitution of this pathway in E. coli can bring the production of adipic acid to 68 g/L, the highest value reported. However, in the actual production process of this strain, there are the following defects: 1. Poor acid resistance, the strain will crack when the pH is lower than 5; 2. The cost of feeding is high: high-cost carbon sources such as glucose must be used during production. Fermentation; 3. High energy consumption required for fermentation temperature: Since the fermentation temperature required by Escherichia coli is 37°C, the energy demand is high.
从理论上来说,结合Tfu己二酸逆降解途径的优势,以及酿酒酵母宿主的优势,不仅可以获得较高的己二酸产量、产率,还可以克服大规模工业化生产遇到的种种问题,如菌株抗逆性、耐酸性、遗传稳定性等,是一种良好的策略。In theory, combining the advantages of the Tfu adipic acid reverse degradation pathway and the advantages of the Saccharomyces cerevisiae host, not only can higher adipic acid yield and yield be obtained, but also various problems encountered in large-scale industrial production can be overcome. Such as strain resistance, acid resistance, genetic stability, etc., is a good strategy.
发明内容SUMMARY OF THE INVENTION
本发明首先提供了一种产己二酸的重组酿酒酵母,过量表达了来自褐色喜热裂孢菌β-酮硫解酶、3-羟酰基-辅酶A脱氢酶、3-羟基己二酰脱氢酶、5-羧基-2-戊烯酰辅酶A还原酶和己二酰辅酶A合成酶的基因。The present invention first provides an adipic acid-producing recombinant Saccharomyces cerevisiae, which overexpresses β-ketothiolase, 3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyadipoyl Genes for dehydrogenase, 5-carboxy-2-pentenoyl-CoA reductase, and adipoyl-CoA synthase.
在本发明的一种实施方式中,所述过量表达是分模块过量表达;具体为:β-酮硫解酶和3-羟酰基-辅酶A脱氢酶基因采用同一个载体共表达;3-羟基己二酰脱氢酶基因、5-羧基-2-戊烯酰辅酶A还原酶基因采用同一个载体共表达;己二酰辅酶A合成酶基因采用一个载体表达。In one embodiment of the present invention, the overexpression is submodule overexpression; specifically: β-ketothiolase and 3-hydroxyacyl-CoA dehydrogenase genes are co-expressed using the same vector; 3- The hydroxyadipoyl dehydrogenase gene and the 5-carboxy-2-pentenoyl-CoA reductase gene were co-expressed with the same vector; the adipoyl-CoA synthase gene was expressed with a single vector.
在本发明的一种实施方式中,所述重组酿酒酵母以酿酒酵母BY4741或敲除了LSC1基因的酿酒酵母BY4741为宿主。In one embodiment of the present invention, the recombinant Saccharomyces cerevisiae uses Saccharomyces cerevisiae BY4741 or Saccharomyces cerevisiae BY4741 with the LSC1 gene knocked out as a host.
在本发明的一种实施方式中,所述分模块过量表达是以pRS423为表达载体表达β-酮硫解酶基因和3-羟酰基-辅酶A脱氢酶基因;以pHAC181为表达载体表达3-羟基己二酰脱氢酶基因和5-羧基-2-戊烯酰辅酶A还原酶基因;以Y42为表达载体表达己二酰辅酶A合成酶基因。In one embodiment of the present invention, the sub-module overexpression uses pRS423 as the expression vector to express β-ketothiolase gene and 3-hydroxyacyl-CoA dehydrogenase gene; pHAC181 is used as the expression vector to express 3 -Hydroxyadipoyl dehydrogenase gene and 5-carboxy-2-pentenoyl-CoA reductase gene; Y42 was used as the expression vector to express the adipoyl-CoA synthase gene.
在本发明的一种实施方式中,所述β-酮硫解酶基因(Tfu_0875)的Accessionnumber为MN550906,核苷酸序列如SEQ ID NO.1所示;所述3-羟酰基-辅酶A脱氢酶基因(Tfu_2399)的Accession number为MN550907,核苷酸序列如SEQ ID NO.2所示;所述3-羟基己二酰脱氢酶基因(Tfu_0068)的Accession number为MN550908,核苷酸序列如SEQ IDNO.3所示;所述5-羧基-2-戊烯酰辅酶A还原酶基因(Tfu_1648)的Accession number为MN550909,核苷酸序列如SEQ ID NO.4所示;所述己二酰辅酶A合成酶(Tfu_2576,Tfu_2577)的Accession number分别为MN550910、MN550911,核苷酸序列如SEQ ID NO.5、SEQ ID NO.6所示。In one embodiment of the present invention, the Accession number of the β-ketothiolase gene (Tfu_0875) is MN550906, and the nucleotide sequence is shown in SEQ ID NO. 1; The Accession number of the hydrogenase gene (Tfu_2399) is MN550907, and the nucleotide sequence is shown in SEQ ID NO.2; the Accession number of the 3-hydroxyadipoyl dehydrogenase gene (Tfu_0068) is MN550908, and the nucleotide sequence is MN550908. As shown in SEQ ID NO.3; the Accession number of the 5-carboxy-2-pentenoyl-CoA reductase gene (Tfu_1648) is MN550909, and the nucleotide sequence is shown in SEQ ID NO.4; The Accession numbers of the acyl-CoA synthases (Tfu_2576, Tfu_2577) are MN550910 and MN550911, respectively, and the nucleotide sequences are shown in SEQ ID NO.5 and SEQ ID NO.6.
本发明的第二个目的是提供一种构建所述重组酿酒酵母的方法,包括以下步骤:The second object of the present invention is to provide a method for constructing the recombinant Saccharomyces cerevisiae, comprising the following steps:
(1)以质粒pRS423为骨架载体,连接基因Tfu_0875、Tfu_2399,得到重组质粒pRS423-Tfu_0875-Tfu_2399;(1) using plasmid pRS423 as backbone vector, connecting genes Tfu_0875 and Tfu_2399 to obtain recombinant plasmid pRS423-Tfu_0875-Tfu_2399;
(2)以质粒pHAC181为骨架载体,连接基因Tfu_0068、Tfu_1648,得到重组质粒pHAC181-Tfu_0068-Tfu_1648;(2) using plasmid pHAC181 as a backbone vector, connecting genes Tfu_0068 and Tfu_1648 to obtain recombinant plasmid pHAC181-Tfu_0068-Tfu_1648;
(3)以质粒Y42为骨架载体,连接基因Tfu_2576、Tfu_2577,得到重组质粒Y42-Tfu_2576-Tfu_2577;(3) using plasmid Y42 as a backbone vector, connecting genes Tfu_2576 and Tfu_2577 to obtain recombinant plasmid Y42-Tfu_2576-Tfu_2577;
(4)将pRS423-Tfu_0875-Tfu_2399、pHAC181-Tfu_0068-Tfu_1648、Y42-Tfu_2576-Tfu_2577分别转入野生型BY4741或敲除了LSC1基因的酿酒酵母BY4741,得到重组酿酒酵母P123、P123ΔLSC1。(4) pRS423-Tfu_0875-Tfu_2399, pHAC181-Tfu_0068-Tfu_1648, Y42-Tfu_2576-Tfu_2577 were respectively transferred into wild-type BY4741 or Saccharomyces cerevisiae BY4741 with LSC1 gene knocked out to obtain recombinant Saccharomyces cerevisiae P123 and P123ΔLSC1.
在本发明的一种实施方式中,步骤(1)以酿酒酵母BY4741的gDNA为模板,用引物CN9847-1-AF/R、CN9847-1-BF/R、CN9847-1-DF/R、CN9847-1-EF/R、CN9847-1-GF/R分别扩增基因片段Tcyc1-1、Ttef1-1、Ptef1-1、Pgpd1-1、Ttdh2-1,与基因合成得到的SEQ ID NO.1/2所示的Tfu_0875、Tfu_2399片段按照质粒图谱顺序进行同源重组连接,各个片段全长连接至T载体,得到中间构建pUCmT-Tfu_0875-Tfu_2399;将中间构建体pUCmT-Tfu_0875-Tfu_2399与质粒pRS423使用XhoI与SacI双酶切,再用T4 DNA连接酶连接得到重组质粒pRS423-Tfu_0875-Tfu_2399。In one embodiment of the present invention, step (1) takes the gDNA of Saccharomyces cerevisiae BY4741 as a template, and uses primers CN9847-1-AF/R, CN9847-1-BF/R, CN9847-1-DF/R, CN9847 -1-EF/R, CN9847-1-GF/R amplified gene fragments Tcyc1-1, Ttef1-1, Ptef1-1, Pgpd1-1, Ttdh2-1 respectively, and SEQ ID NO.1/ The Tfu_0875 and Tfu_2399 fragments shown in 2 are connected by homologous recombination according to the sequence of the plasmid map, and the full length of each fragment is connected to the T carrier to obtain the intermediate construction pUCmT-Tfu_0875-Tfu_2399; the intermediate construct pUCmT-Tfu_0875-Tfu_2399 and plasmid pRS423 use XhoI Double digestion with SacI, and then ligated with T 4 DNA ligase to obtain the recombinant plasmid pRS423-Tfu_0875-Tfu_2399.
在本发明的一种实施方式中,步骤(2)以酿酒酵母BY4741的gDNA为模板,用引物CN9847-2-AF/R、CN9847-2-BF/R、CN9847-2-DF/R、CN9847-2-EF/R、CN9847-2-GF/R分别扩增基因片段Ttdh2-2、Tadh1-2、Padh1-2、Ppgk1-2、Tpgk1-2,与基因合成的核苷酸序列如SEQID NO.3/4所示的Tfu_0068、Tfu_1648片段按照质粒图谱顺序进行同源重组连接,各个片段全长连接至T载体,得到中间构建pUCmT-Tfu_0068-Tfu_1648;将中间构建体pUCmT-Tfu_0068-Tfu_1648与质粒pHAC181使用NdeI与EcoRI双酶切,再用T4 DNA连接酶连接得到重组质粒pHAC181-Tfu_0068-Tfu_1648。In one embodiment of the present invention, step (2) takes the gDNA of Saccharomyces cerevisiae BY4741 as a template, and uses primers CN9847-2-AF/R, CN9847-2-BF/R, CN9847-2-DF/R, CN9847 -2-EF/R and CN9847-2-GF/R respectively amplify gene fragments Ttdh2-2, Tadh1-2, Padh1-2, Ppgk1-2, Tpgk1-2, and the nucleotide sequences synthesized with the genes are as shown in SEQID NO The Tfu_0068 and Tfu_1648 fragments shown in .3/4 were connected by homologous recombination according to the sequence of the plasmid map, and the full length of each fragment was connected to the T vector to obtain the intermediate construction pUCmT-Tfu_0068-Tfu_1648; pHAC181 was double digested with NdeI and EcoRI, and then ligated with T4 DNA ligase to obtain the recombinant plasmid pHAC181 -Tfu_0068-Tfu_1648.
在本发明的一种实施方式中,步骤(3)以获得的酿酒酵母BY4741的gDNA为模板,用引物CN9847-3-AF/R、CN9847-3-BF/R、CN9847-3-DF/R、CN9847-3-EF/R、CN9847-3-GF/R分别扩增基因片段Tpgk1-3、Ttpi1-3、Ptpi1-3、Ptdh3-3、Tfab1-3,与基因合成(苏州泓讯)得到的核苷酸序列如SEQ ID NO.5/6所示的Tfu_2576、Tfu_2577片段进行同源重组连接,各个片段全长连接至T载体,得到中间构建体pUCmT-Tfu_2576-Tfu_2577;将中间构建体pUCmT-Tfu_2576-Tfu_2577与质粒Y42使用BamHI与EcoRI双酶切,再用T4 DNA连接酶连接得到重组质粒Y42-Tfu_2576-Tfu_2577。In one embodiment of the present invention, the gDNA of Saccharomyces cerevisiae BY4741 obtained in step (3) is used as a template, and primers CN9847-3-AF/R, CN9847-3-BF/R, CN9847-3-DF/R are used as a template. , CN9847-3-EF/R, CN9847-3-GF/R respectively amplified gene fragments Tpgk1-3, Ttpi1-3, Ptpi1-3, Ptdh3-3, Tfab1-3, and obtained with gene synthesis (Suzhou Hongxun) The nucleotide sequence of Tfu_2576 and Tfu_2577 fragments shown in SEQ ID NO.5/6 are connected by homologous recombination, and the full length of each fragment is connected to the T carrier to obtain the intermediate construct pUCmT-Tfu_2576-Tfu_2577; the intermediate construct pUCmT -Tfu_2576-Tfu_2577 and plasmid Y42 were double digested with BamHI and EcoRI, and then ligated with T4 DNA ligase to obtain recombinant plasmid Y42- Tfu_2576 -Tfu_2577.
本发明的第三个目的在于提供一种发酵生产己二酸的方法,所述方法应用重组酿酒酵母P123和P123ΔLSC1进行发酵。The third object of the present invention is to provide a method for producing adipic acid by fermentation, which uses recombinant Saccharomyces cerevisiae P123 and P123ΔLSC1 for fermentation.
在本发明的一种实施方式中,所述方法将所述重组酿酒酵母于30℃培养至OD600为1.0-1.2时,以10%的接种量转接至YPD培养基,30℃发酵96h。In one embodiment of the present invention, the method cultivates the recombinant Saccharomyces cerevisiae at 30°C until the OD 600 is 1.0-1.2, transfers to YPD medium with 10% inoculum, and ferments at 30°C for 96 hours.
在本发明的一种实施方式中,所述发酵培养基为SD(-Ura-His-Leu)培养基。In one embodiment of the present invention, the fermentation medium is SD (-Ura-His-Leu) medium.
本发明还要求保护所述产己二酸的重组酿酒酵母在制备含己二酸的产品方面的应用。The present invention also claims the application of the adipic acid-producing recombinant Saccharomyces cerevisiae in preparing adipic acid-containing products.
本发明的有益效果在于:将高效的己二酸生物合成途径——Tfu己二酸逆降解途径成功的导入酿酒酵母重组菌,并且实现了己二酸在酿酒酵母宿主中的从头合成。相比化学法合成己二酸,全生物法合成己二酸,首先产品的回收更加方便简单,而且极大程度地降低了对环境的污染程度;相比其他己二酸合成宿主,酿酒酵母以其优良的抗逆性、耐酸性、遗传稳定性,为工业化发酵生产己二酸准备了基础;同时,酿酒酵母作为食品安全(GRAS)菌株,可以实现生物合成己二酸在食品领域的直接运用。The beneficial effects of the present invention are: the efficient adipic acid biosynthesis pathway, the Tfu adipic acid reverse degradation pathway, is successfully introduced into the Saccharomyces cerevisiae recombinant bacteria, and the de novo synthesis of adipic acid in the Saccharomyces cerevisiae host is realized. Compared with chemical synthesis of adipic acid, the whole biological synthesis of adipic acid is more convenient and simpler to recover the product, and greatly reduces the degree of environmental pollution; compared with other adipic acid synthesis hosts, Saccharomyces cerevisiae is Its excellent stress resistance, acid resistance and genetic stability provide the basis for the industrial fermentation production of adipic acid; at the same time, as a food safety (GRAS) strain, Saccharomyces cerevisiae can realize the direct application of biosynthesis of adipic acid in the food field .
本发明构建的重组酿酒酵母能够以葡萄糖为唯一碳源生产己二酸,在摇瓶水平上,,通过Tfu己二酸逆降解途径的引入及发酵条件的控制,P123△LSC1菌种发酵产量达到33mg/L,实现了己二酸在酿酒酵母宿主合成从无到有的跨越。并通过发酵优化,使己二酸在酿酒酵母宿主P123中产量提高至0.113g/L。同时,己二酸发酵过程当中宿主可以耐受4以下的pH值、遗传稳定性良好,这为以酿酒酵母为宿主工业化发酵生产食品安全的己二酸奠定了基础。The recombinant Saccharomyces cerevisiae constructed in the present invention can use glucose as the sole carbon source to produce adipic acid. At the shake flask level, through the introduction of the reverse degradation pathway of Tfu adipic acid and the control of fermentation conditions, the fermentation yield of P123△LSC1 strain reaches 100%. 33mg/L, realizing the leap of adipic acid synthesis in Saccharomyces cerevisiae host from scratch. And through fermentation optimization, the yield of adipic acid in Saccharomyces cerevisiae host P123 was increased to 0.113g/L. At the same time, during the adipic acid fermentation process, the host can tolerate pH values below 4 and has good genetic stability, which lays the foundation for the industrial fermentation of food-safe adipic acid with Saccharomyces cerevisiae as the host.
附图说明Description of drawings
图1为Tfu己二酸逆降解途径示意图;Fig. 1 is a schematic diagram of the reverse degradation pathway of Tfu adipic acid;
图2为BY4741敲除LSC1基因的菌落pcr验证图谱。1、2、5、6、7:敲除LSC1成功的菌株;3、4:未敲除成功的菌株;8:空白对照;M:5000bp Marker;Figure 2 is a PCR verification map of the colony that BY4741 knocked out the LSC1 gene. 1, 2, 5, 6, 7: strains successfully knocked out LSC1; 3, 4: strains without successful knockout; 8: blank control; M: 5000bp Marker;
图3为pRS423-Tfu_0875-Tfu_2399质粒图谱;Fig. 3 is pRS423-Tfu_0875-Tfu_2399 plasmid map;
图4为pHAC181-Tfu_0068-Tfu_1648质粒图谱;Fig. 4 is pHAC181-Tfu_0068-Tfu_1648 plasmid map;
图5为Y42-Tfu_2576-Tfu_2577质粒图谱;Fig. 5 is Y42-Tfu_2576-Tfu_2577 plasmid map;
图6为重组质粒pcr验证图谱。1:pRS423-Tfu_0875-Tfu_2399;2:pHAC181-Tfu_0068-Tfu_1648;3:Y42-Tfu_2576-Tfu_2577;M:5000bp Marker;Figure 6 is a PCR verification map of the recombinant plasmid. 1: pRS423-Tfu_0875-Tfu_2399; 2: pHAC181-Tfu_0068-Tfu_1648; 3: Y42-Tfu_2576-Tfu_2577; M: 5000bp Marker;
图7为重组酿酒酵母P123菌落pcr验证图谱。M:5000bp Marker;1:基因片段Tfu_0875;2:基因片段Tfu_2399;3:基因片段Tfu_0068;4:基因片段Tfu_1648;5:基因片段Tfu_2576;6:基因片段Tfu_2577;Figure 7 is the PCR verification map of the recombinant Saccharomyces cerevisiae P123 colony. M: 5000bp Marker; 1: Gene fragment Tfu_0875; 2: Gene fragment Tfu_2399; 3: Gene fragment Tfu_0068; 4: Gene fragment Tfu_1648; 5: Gene fragment Tfu_2576; 6: Gene fragment Tfu_2577;
图8为在YPD培养基中BY4741野生型、BY4741ΔLSC1、P123和P123ΔLSC1己二酸产量图谱。Figure 8 is a graph of adipic acid production of BY4741 wild type, BY4741ΔLSC1, P123 and P123ΔLSC1 in YPD medium.
具体实施方式Detailed ways
表1下述实施例涉及的引物序列表Table 1 List of primer sequences involved in the following examples
β-酮硫解酶基因(Tfu_0875)的核苷酸序列如SEQ ID NO.1所示;3-羟酰基-辅酶A脱氢酶基因(Tfu_2399)的核苷酸序列如SEQ ID NO.2所示;3-羟基己二酰脱氢酶基因(Tfu_0068)的核苷酸序列如SEQ ID NO.3所示;5-羧基-2-戊烯酰辅酶A还原酶基因(Tfu_1648)的核苷酸序列如SEQ ID NO.4所示;己二酰辅酶A合成酶基因(Tfu_2576、Tfu_2577)的核苷酸序列分别如SEQ ID NO.5、SEQ ID NO.6所示。The nucleotide sequence of β-ketothiolase gene (Tfu_0875) is shown in SEQ ID NO.1; the nucleotide sequence of 3-hydroxyacyl-CoA dehydrogenase gene (Tfu_2399) is shown in SEQ ID NO.2 The nucleotide sequence of 3-hydroxyadipoyl dehydrogenase gene (Tfu_0068) is shown in SEQ ID NO.3; the nucleotide sequence of 5-carboxy-2-pentenoyl-CoA reductase gene (Tfu_1648) The sequence is shown in SEQ ID NO.4; the nucleotide sequences of adipyl-CoA synthase genes (Tfu_2576, Tfu_2577) are shown in SEQ ID NO.5 and SEQ ID NO.6, respectively.
实施例1:BY4741中succinate--CoA ligase(GDP-forming)subunit alpha(LSC1)基因的敲除Example 1: Knockout of succinate--CoA ligase (GDP-forming) subunit alpha (LSC1) gene in BY4741
重组酿酒酵母LSC1基因敲除框的获得:以ΔLSC1-pUG6-F和ΔLSC1-pUG6-R为引物,以pUG6载体为模板,通过PCR反应扩增出大小为1700bp的DNA片段,该片段在首尾分别与BY4741基因组上LSC1基因ORF框上游和下游的50bp为同源序列。将PCR产物纯化后留取备用。Recombinant Saccharomyces cerevisiae LSC1 knockout box was obtained: using ΔLSC1-pUG6-F and ΔLSC1-pUG6-R as primers and pUG6 vector as template, a DNA fragment with a size of 1700 bp was amplified by PCR reaction. It is a homologous sequence with 50bp upstream and downstream of the ORF box of LSC1 gene in BY4741 genome. The PCR product was purified and reserved for future use.
重组酿酒酵母基因敲除框的转化:将平板活化的酿酒酵母BY4741单菌落接种于装有10mL YPD液体培养基的100mL锥形瓶中,然后在转速为250r·min-1,温度为30℃的摇床过夜培养作为新鲜的种子液,按1%转接至装有50mL YPD培养基的250mL锥形瓶中,相同条件下培养5-8h,至OD600至0.8-1.0左右停止培养。(2)用50mL离心管收集菌液,6000r·min-1,4℃低温离心10min,收集菌体。(3)倒掉上清液,用预冷的25mL无菌水清洗菌体,低温离心后弃掉上清收集菌体。重复操作3次。(4)弃上清收集菌体,加入1mL的无菌细胞悬浮液(5%甘油,10%二甲基亚枫,v/v)重悬菌体,按100μL分装作为转化用感受态,保存于-80℃冰箱用于后续实验。(5)感受态细胞于30℃孵育2min,8000r·min-1离心2min,去上清液,配制转化体系,包括以下成分:260μL 50%PEG 4000,36μL 1M醋酸锂,2μg待转化DNA片段,10μLssDNA用无菌水补至360μL,重悬1min。(6)于42℃热激30min,6000rpm离心5min,去上清用无菌水将菌体重悬,6000rpm离心5min,弃上清,菌体直接涂布YPD(G418抗性)平板。Transformation of recombinant Saccharomyces cerevisiae gene knockout box: inoculate a single colony of Saccharomyces cerevisiae BY4741 activated on the plate into a 100 mL conical flask containing 10 mL of YPD liquid medium, and then rotate at 250 r·min -1 at a temperature of 30 ℃. Shaker overnight culture as fresh seed solution, transfer to 250mL Erlenmeyer flask with 50mL YPD medium at 1%, culture for 5-8h under the same conditions, and stop the culture when OD 600 is about 0.8-1.0. (2) Collect the bacterial liquid with a 50 mL centrifuge tube, centrifuge at 6000 r·min -1 for 10 min at 4°C, and collect the bacterial cells. (3) Pour off the supernatant, wash the cells with 25 mL of pre-cooled sterile water, and then discard the supernatant to collect the cells after low-temperature centrifugation. Repeat the
BY4741ΔLSC1菌株的获得:将上述平板生长的新鲜单菌落挑取至20μL无菌水中混匀,取1μL作为PCR反应模板,使用敲除验证引物进行PCR反应,反应体系按照表2配制。将PCR产物进行琼脂糖凝胶电泳,选取条带大小为3190bp的单菌落,即为正确的敲除株(对照为2572bp),命名为BY4741ΔLSC1。Obtainment of BY4741ΔLSC1 strain: Pick a fresh single colony grown on the above plate into 20 μL of sterile water and mix well, take 1 μL as a PCR reaction template, and use knockout verification primers for PCR reaction. The reaction system is prepared according to Table 2. The PCR product was subjected to agarose gel electrophoresis, and a single colony with a band size of 3190 bp was selected, which was the correct knockout strain (the control was 2572 bp), and was named BY4741ΔLSC1.
表2菌落PCR反应体系Table 2 Colony PCR reaction system
凝胶电泳的准备:称取0.3g琼脂糖溶于25mL 1×TAE缓冲液中,加热30-60s使其完全溶化,加入5μL EB,摇匀后倒入已插好梳子的水平胶框中,避免产生气泡,放置待其凝固。轻轻地拔出梳子,将凝胶放入电泳槽中,倒入电泳缓冲液使其没过胶块,根据上样量加入适量的10×Loading Buffer,垂直点入上样孔中,插好电极后,100V运行30min后结束,取出胶块放入凝胶成像仪中进行拍照。Preparation for gel electrophoresis: Weigh 0.3g of agarose and dissolve it in 25mL of 1×TAE buffer, heat for 30-60s to completely dissolve, add 5μL of EB, shake well and pour into the horizontal gel box with the comb inserted, Avoid creating air bubbles and leave to solidify. Gently pull out the comb, put the gel into the electrophoresis tank, pour the electrophoresis buffer so that it does not cover the gel block, add an appropriate amount of 10×Loading Buffer according to the loading volume, point it vertically into the loading hole, and insert it well After the electrode, run at 100V for 30min and end, take out the gel block and put it into the gel imager to take pictures.
实施例2:重组质粒的构建及重组酿酒酵母的获得Example 2: Construction of recombinant plasmid and acquisition of recombinant Saccharomyces cerevisiae
Tfu_0875、Tfu_2399、Tfu_0068、Tfu_1648、Tfu_2576、Tfu_2577的序列已于在NCBI中公布。The sequences of Tfu_0875, Tfu_2399, Tfu_0068, Tfu_1648, Tfu_2576, Tfu_2577 have been published in NCBI.
以获得的酿酒酵母BY4741的gDNA为模板,利用带有同源臂的引物(表1)进行PCR扩增,得到基因片段Tcyc1-1、Ttef1-1、Ptef1-1、Pgpd1-1、Ttdh2-1片段,其中,采用引物CN9847-1-AF/R扩增Tcyc1-1;采用引物CN9847-1-BF/R扩增Ttef1-1;采用引物CN9847-1-DF/R扩增Ptef1-1;采用引物CN9847-1-EF/R扩增Pgpd1-1;采用引物CN9847-1-GF/R扩增Ttdh2-1;将扩增后的Tcyc1-1、Ttef1-1、Ptef1-1、Pgpd1-1、Ttdh2-1与合成的序列如SEQ IDNO.1、2所示的Tfu_0875、Tfu_2399片段进行同源重组连接,各个片段按照图3的顺序全长连接至T载体,得到中间构建pUCmT-Tfu_0875-Tfu_2399。将中间构建体pUCmT-Tfu_0875-Tfu_2399与质粒pRS423使用XhoI与SacI双酶切,再用T4 DNA连接酶连接得到重组质粒pRS423-Tfu_0875-Tfu_2399。The obtained gDNA of Saccharomyces cerevisiae BY4741 was used as a template, and the primers with homology arms (Table 1) were used for PCR amplification to obtain gene fragments Tcyc1-1, Ttef1-1, Ptef1-1, Pgpd1-1, Ttdh2-1 Fragments, wherein Tcyc1-1 was amplified with primer CN9847-1-AF/R; Ttef1-1 was amplified with primer CN9847-1-BF/R; Ptef1-1 was amplified with primer CN9847-1-DF/R; The primer CN9847-1-EF/R was used to amplify Pgpd1-1; the primer CN9847-1-GF/R was used to amplify Ttdh2-1; the amplified Tcyc1-1, Ttef1-1, Ptef1-1, Pgpd1-1, Ttdh2-1 was connected by homologous recombination with the Tfu_0875 and Tfu_2399 fragments whose synthetic sequences are shown in SEQ ID NO.1 and 2, and each fragment was connected to the T vector in full length according to the sequence of Figure 3 to obtain the intermediate construction pUCmT-Tfu_0875-Tfu_2399. The intermediate construct pUCmT-Tfu_0875-Tfu_2399 and plasmid pRS423 were double digested with XhoI and SacI, and then ligated with T4 DNA ligase to obtain the recombinant plasmid pRS423 -Tfu_0875-Tfu_2399.
以获得的酿酒酵母BY4741的gDNA为模板,利用带有同源臂的引物(表1)进行PCR扩增,得到基因片段Ttdh2-2、Tadh1-2、Padh1-2、Ppgk1-2、Tpgk1-2,其中,采用引物CN9847-2-AF/R扩增Ttdh2-2;采用引物CN9847-2-BF/R扩增Tadh1-2;采用引物CN9847-2-DF/R扩增Padh1-2;采用引物CN9847-2-EF/R扩增Ppgk1-2;采用引物CN9847-2-GF/R扩增Tpgk1-2;将扩增后的Ttdh2-2、Tadh1-2、Padh1-2、Ppgk1-2、Tpgk1-2与基因合成的SEQ ID NO.3、4所示Tfu_0068、Tfu_1648片段进行同源重组连接,各个片段按照图4的顺序全长连接至T载体,得到中间构建体pUCmT-Tfu_0068-Tfu_1648。将中间构建体pUCmT-Tfu_0068-Tfu_1648与质粒pHAC181使用NdeI与EcoRI双酶切,再用T4 DNA连接酶连接得到重组质粒pHAC181-Tfu_0068-Tfu_1648The obtained gDNA of Saccharomyces cerevisiae BY4741 was used as a template, and the primers with homology arms (Table 1) were used for PCR amplification to obtain gene fragments Ttdh2-2, Tadh1-2, Padh1-2, Ppgk1-2, Tpgk1-2 , among which, primer CN9847-2-AF/R was used to amplify Ttdh2-2; primer CN9847-2-BF/R was used to amplify Tadh1-2; primer CN9847-2-DF/R was used to amplify Padh1-2; CN9847-2-EF/R was used to amplify Ppgk1-2; primer CN9847-2-GF/R was used to amplify Tpgk1-2; the amplified Ttdh2-2, Tadh1-2, Padh1-2, Ppgk1-2, Tpgk1 -2 was connected by homologous recombination with the Tfu_0068 and Tfu_1648 fragments shown in SEQ ID NO. 3 and 4 of gene synthesis, and each fragment was connected to the T vector in full length according to the sequence of Figure 4 to obtain the intermediate construct pUCmT-Tfu_0068-Tfu_1648. The intermediate construct pUCmT-Tfu_0068-Tfu_1648 and the plasmid pHAC181 were double digested with NdeI and EcoRI, and then ligated with T4 DNA ligase to obtain the recombinant plasmid pHAC181 -Tfu_0068-Tfu_1648
以获得的酿酒酵母BY4741的gDNA为模板,利用带有同源臂的引物(表1)进行PCR扩增,得到基因片段Tpgk1-3、Ttpi1-3、Ptpi1-3、Ptdh3-3、Tfab1-3,其中,采用引物CN9847-3-AF/R扩增Tpgk1-3;采用引物CN9847-3-BF/R扩增Ttpi1-3;采用引物CN9847-3-DF/R扩增Ptpi1-3;采用引物CN9847-3-EF/R扩增Ptdh3-3;采用引物CN9847-3-GF/R扩增Tfab1-3;将扩增后的Tpgk1-3、Ttpi1-3、Ptpi1-3、Ptdh3-3、Tfab1-3与基因合成的序列如SEQ ID NO.5、6所示的Tfu_2576、Tfu_2577片段进行同源重组连接,各个片段按照图5的顺序全长连接至T载体,得到中间构建体pUCmT-Tfu_2576-Tfu_2577。将中间构建体pUCmT-Tfu_2576-Tfu_2577与质粒Y42使用BamHI与EcoRI双酶切,再用T4 DNA连接酶连接得到重组质粒Y42-Tfu_2576-Tfu_2577。The obtained gDNA of Saccharomyces cerevisiae BY4741 was used as a template, and the primers with homology arms (Table 1) were used for PCR amplification to obtain gene fragments Tpgk1-3, Ttpi1-3, Ptpi1-3, Ptdh3-3, Tfab1-3 , among which, primer CN9847-3-AF/R was used to amplify Tpgk1-3; primer CN9847-3-BF/R was used to amplify Ttpi1-3; primer CN9847-3-DF/R was used to amplify Ptpi1-3; CN9847-3-EF/R was used to amplify Ptdh3-3; primer CN9847-3-GF/R was used to amplify Tfab1-3; the amplified Tpgk1-3, Ttpi1-3, Ptpi1-3, Ptdh3-3, Tfab1 -3 and the Tfu_2576 and Tfu_2577 fragments whose sequences of gene synthesis are shown in SEQ ID NO.5 and 6 are connected by homologous recombination, and each fragment is connected to the T vector in full length according to the sequence of FIG. 5 to obtain the intermediate construct pUCmT-Tfu_2576- Tfu_2577. The intermediate construct pUCmT-Tfu_2576-Tfu_2577 and plasmid Y42 were double digested with BamHI and EcoRI, and then ligated with T4 DNA ligase to obtain recombinant plasmid Y42- Tfu_2576 -Tfu_2577.
将pRS423-Tfu_0875-Tfu_2399、pHAC181-Tfu_0068-Tfu_1648、Y42-Tfu_2576-Tfu_2577分别转入野生型酿酒酵母BY4741和敲除了LSC1基因的酿酒酵母BY4741,得到重组酿酒酵母P123和P123ΔLSC1。pRS423-Tfu_0875-Tfu_2399, pHAC181-Tfu_0068-Tfu_1648, and Y42-Tfu_2576-Tfu_2577 were transferred into wild-type Saccharomyces cerevisiae BY4741 and Saccharomyces cerevisiae BY4741 with the LSC1 gene knocked out, respectively, to obtain recombinant Saccharomyces cerevisiae P123 and P123ΔLSC1.
实施例3:重组酿酒酵母摇瓶发酵Example 3: Recombinant Saccharomyces cerevisiae shake flask fermentation
YPD培养基:酵母浸出物10g/L,蛋白胨20g/L,葡萄糖20g/L,固体YPD培养基中加入2.0%琼脂,pH为5.4~5.6,121℃,高压蒸汽灭菌30min;YPD medium: yeast extract 10g/L, peptone 20g/L, glucose 20g/L, solid YPD medium with 2.0% agar, pH 5.4~5.6, 121℃, high pressure steam sterilization for 30min;
SD培养基:葡萄糖20g,YNB培养基(不含(NH4)2SO4 1.7g),(NH4)2SO4 5g,加1000mL去离子水pH=5.5,115℃,高压蒸汽灭菌15min。接种前,根据选择性标记加入适量灭过菌的氨基酸、嘧啶、琼脂粉。SD medium: glucose 20g, YNB medium (without (NH 4 ) 2 SO 4 1.7g), (NH 4 ) 2 SO 4 5g, add 1000mL deionized water pH=5.5, 115°C, autoclave for 15min . Before inoculation, add appropriate amount of sterilized amino acid, pyrimidine and agar powder according to the selectable marker.
LB培养基(按g/L计):10胰蛋白胨+5酵母粉+10NaCl。LB medium (in g/L): 10 tryptone+5 yeast powder+10NaCl.
发酵条件:以SD(-Ura-His-Leu)培养基为发酵培养基,将重组酿酒酵母于30℃培养至OD600为1.0-1.2时,无菌水洗涤2次,以10%的接种量转接至YPD培养基发酵96h,装液量为50mL/250mL,转速250rpm,温度30℃。Fermentation conditions: Using SD (-Ura-His-Leu) medium as fermentation medium, the recombinant Saccharomyces cerevisiae was cultured at 30°C until the OD 600 was 1.0-1.2, washed twice with sterile water, and the inoculum was 10%. Transfer to YPD medium and ferment for 96h, the filling volume is 50mL/250mL, the rotation speed is 250rpm, and the temperature is 30℃.
以BY4741野生型、敲除LSC1基因的菌株BY4741ΔLSC1为对照菌株,在相同条件下培养,己二酸产量为0,BY4741ΔLSC1己二酸最高产量为0,P123己二酸最高产量为0.113g/L,P123ΔLSC1己二酸最高产量为0.033g/L。Taking BY4741 wild-type and LSC1 gene knockout strain BY4741ΔLSC1 as the control strain, cultured under the same conditions, the production of adipic acid was 0, the highest production of adipic acid of BY4741ΔLSC1 was 0, and the highest production of adipic acid of P123 was 0.113g/L, The highest yield of adipic acid in P123ΔLSC1 was 0.033 g/L.
虽然本发明已以较佳实施例公开如上,但其并非用以限定本发明,任何熟悉此技术的人,在不脱离本发明的精神和范围内,都可做各种的改动与修饰,因此本发明的保护范围应该以权利要求书所界定的为准。Although the present invention has been disclosed above with preferred embodiments, it is not intended to limit the present invention. Anyone who is familiar with this technology can make various changes and modifications without departing from the spirit and scope of the present invention. Therefore, The protection scope of the present invention should be defined by the claims.
SEQUENCE LISTINGSEQUENCE LISTING
<110> 江南大学<110> Jiangnan University
<120> 一种利用酿酒酵母生产己二酸的方法<120> A method of utilizing Saccharomyces cerevisiae to produce adipic acid
<160> 6<160> 6
<170> PatentIn version 3.3<170> PatentIn version 3.3
<210> 1<210> 1
<211> 1176<211> 1176
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 1<400> 1
atgactgacg tttatatctt ggacgcagta agaaccccat tcggaagata tgggggagcg 60atgactgacg tttatatctt ggacgcagta agaaccccat tcggaagata tgggggagcg 60
cttagcggca tcagaccgga tgatctagcc gcccatgtac tacgtgcgtt agctgagagg 120cttagcggca tcagaccgga tgatctagcc gcccatgtac tacgtgcgtt agctgagagg 120
agcccggggt tagatcctgc ggccgtcgac gatgttttct tcggtgacgc aaacggtgca 180agcccggggt tagatcctgc ggccgtcgac gatgttttct tcggtgacgc aaacggtgca 180
ggcgaagaca accgtaatgt tgcccgtatg gcggctttgc tggcggggtg gcctacaagt 240ggcgaagaca accgtaatgt tgcccgtatg gcggctttgc tggcggggtg gcctacaagt 240
gtgcccgggg taactcttaa ccgtttatgc ggatcaggta tggagagcgt cattgcagca 300gtgcccgggg taactcttaa ccgtttatgc ggatcaggta tggagagcgt cattgcagca 300
aatagagcca tcgctgttgg tgacgcgtca cttgctgtcg caggcggtgt cgagtccatg 360aatagagcca tcgctgttgg tgacgcgtca cttgctgtcg caggcggtgt cgagtccatg 360
tccagggcac cgtgggtctt gccgaaacca gcacaagggt ttcccaccgg gcacgagact 420tccagggcac cgtgggtctt gccgaaacca gcacaagggt ttcccaccgg gcacgagact 420
ctatacagca cgactttagg gtggcgtatg gtaaatcccg ctatgccgga gcagtggacc 480ctatacagca cgactttagg gtggcgtatg gtaaatcccg ctatgccgga gcagtggacc 480
gtttcactag gcgaaagtac agaacaggtg gcagcaacat acggcatatc cagggcggag 540gtttcactag gcgaaagtac agaacaggtg gcagcaacat acggcatatc cagggcggag 540
caagatgctt tcgcactgag gagtcatgag cgtgctgcgc gtgcgtgggc agaaggggtc 600caagatgctt tcgcactgag gagtcatgag cgtgctgcgc gtgcgtgggc agaaggggtc 600
tttgacgctg agattacaca aattcctgga gcagaactgg aaagagatga aagcattaga 660tttgacgctg agattacaca aattcctgga gcagaactgg aaagagatga aagcattaga 660
gaaacctctg cggaaaaact agccgcctta aagccagcgt ttaggccgga cggaacaatt 720gaaacctctg cggaaaaact agccgcctta aagccagcgt ttaggccgga cggaacaatt 720
acggcaggaa acgcatcacc actaaacgac ggagccgcgg ccttgctaat cggagacgcg 780acggcaggaa acgcatcacc actaaacgac ggagccgcgg ccttgctaat cggagacgcg 780
gcggcagcag aaagggttgg cagggagcct ttggccagga ttgtcagcag aggtgtagcg 840gcggcagcag aaagggttgg cagggagcct ttggccagga ttgtcagcag aggtgtagcg 840
gctgtggacc cggatgtctt tggtattggt ccagtacagg cagcagaaat tgcattaaga 900gctgtggacc cggatgtctt tggtattggt ccagtacagg cagcagaaat tgcattaaga 900
cgtgccggga ttggctggga tgacttatca gtcgtcgagc ttaacgaagc attcgcggct 960cgtgccggga ttggctggga tgacttatca gtcgtcgagc ttaacgaagc attcgcggct 960
cagtccttag cctgtctaaa gttgtggccg gaccttgacc ctgaaatagt taacccaaac 1020cagtccttag cctgtctaaa gttgtggccg gaccttgacc ctgaaatagt taacccaaac 1020
ggaggcgcga ttgccatagg gcatccctta ggggcatcag gtgcaaggat tgttgggact 1080ggaggcgcga ttgccatagg gcatccctta ggggcatcag gtgcaaggat tgttgggact 1080
ctagcgcacg aactacacag gaggggcgga gggtggggac tagcggcaat atgtattggc 1140ctagcgcacg aactacacag gaggggcgga gggtggggac tagcggcaat atgtattggc 1140
gtagggcagg gcttggcagt cgtactgcac agataa 1176gtagggcagg gcttggcagt cgtactgcac agataa 1176
<210> 2<210> 2
<211> 1197<211> 1197
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 2<400> 2
atggttgaag aaataaataa agttggtgtc gtaggactag ggacaatggg ggctggtata 60atggttgaag aaataaataa agttggtgtc gtaggactag ggacaatggg ggctggtata 60
gtagaggttt ttgcgagggc ggggtttacg gttacaggag tggaaattga cgacgcagct 120gtagaggttt ttgcgagggc ggggtttacg gttacaggag tggaaattga cgacgcagct 120
cttgaaaggg gacgtaccca tttggagaaa agtctggcca aagccgtggc gaagggaaag 180cttgaaaggg gacgtaccca tttggagaaa agtctggcca aagccgtggc gaagggaaag 180
ctaactgagg atgaacaaag agccatattg ggtagggtaa ctttcaccac aagcagggat 240ctaactgagg atgaacaaag agccatattg ggtagggtaa ctttcaccac aagcagggat 240
gaccttgctg atgctcatct tgcggtcgaa gctgtcccag aaaggctaga tattaaaagg 300gaccttgctg atgctcatct tgcggtcgaa gctgtcccag aaaggctaga tattaaaagg 300
tccgtcttcg ccgacttgga tagaatcctg cctccagctg ctatactggc tacgaacacg 360tccgtcttcg ccgacttgga tagaatcctg cctccagctg ctatactggc tacgaacacg 360
agttcattat ctgtgacgga aattgccgct ttaacatcca gacccggtaa agtcattggt 420agttcattat ctgtgacgga aattgccgct ttaacatcca gacccggtaa agtcattggt 420
ttgcactttt ttaatccagc tccggttatg aggctagttg aaatcgtcac gacagtggtg 480ttgcactttt ttaatccagc tccggttatg aggctagttg aaatcgtcac gacagtggtg 480
acggaacccc acgtgagaga gactgccaca caggtagtga cgcgtttggg taaaacgccg 540acggaacccc acgtgagaga gactgccaca caggtagtga cgcgtttggg taaaacgccg 540
gtggcagttg gtgaccgtgc tggttttgtc gctaacgcct tgttggtgcc gtatctaaat 600gtggcagttg gtgaccgtgc tggttttgtc gctaacgcct tgttggtgcc gtatctaaat 600
cacgcggtcg cggtttacga gcaaggcctt gctacgaggg agcaaataga cgcagctatt 660cacgcggtcg cggtttacga gcaaggcctt gctacgaggg agcaaataga cgcagctatt 660
acgtccgctg caggtttccc aatggggccg ttgaccctaa tggatctggt gggattggac 720acgtccgctg caggtttccc aatggggccg ttgaccctaa tggatctggt gggattggac 720
gtgctgctag atgttatgga tgtactgtgg gacgagttta ggagaccacg ttatgccgct 780gtgctgctag atgttatgga tgtactgtgg gacgagttta ggagaccacg ttatgccgct 780
gccccactac tgaggaggat ggtagccgct ggcctattag gcagaaaaag cggcagaggc 840gccccactac tgaggaggat ggtagccgct ggcctattag gcagaaaaag cggcagaggc 840
ttctatgact atagcggcgc cgataaccct gctgagcccg agccgacggc accccttgcc 900ttctatgact atagcggcgc cgataaccct gctgagcccg agccgacggc accccttgcc 900
caacttgttg gggatggacc aggccaaatc tctttagcgg atctattatt agttccgcac 960caacttgttg gggatggacc aggccaaatc tctttagcgg atctattatt agttccgcac 960
ctgaatgacg cagctaggat gataggcgat gggtatgcga ccgccgacga tgtggataca 1020ctgaatgacg cagctaggat gataggcgat gggtatgcga ccgccgacga tgtggataca 1020
gccatgcgtc tgggttgcgg ttaccccaag ggcttagccg ccatgctgga cgagcgtgga 1080gccatgcgtc tgggttgcgg ttaccccaag ggcttagccg ccatgctgga cgagcgtgga 1080
gtcaagaacg tgactgagac tttggcagag ctggcagcgg caggactttt tacggatgat 1140gtcaagaacg tgactgagac tttggcagag ctggcagcgg caggactttt tacggatgat 1140
acagcaccgt tgcttacaat gttagcgaag caaggaaaag acactctgag aagctga 1197acagcaccgt tgcttacaat gttagcgaag caaggaaaag acactctgag aagctga 1197
<210> 3<210> 3
<211> 771<211> 771
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 3<400> 3
atgggtgagt tcattagatt tgagtctgac gggcccgtga gacatatagt gttaaatgca 60atgggtgagt tcattagatt tgagtctgac gggcccgtga gacatatagt gttaaatgca 60
ccccaaagac ttaatgcact tgatcgtcct atgttagctg aattagctga ggccgttcgt 120ccccaaagac ttaatgcact tgatcgtcct atgttagctg aattagctga ggccgttcgt 120
gccgtggccg cggatgaaga ggcccgtgca ttggttgtga gcggcgctgg tagagccttc 180gccgtggccg cggatgaaga ggcccgtgca ttggttgtga gcggcgctgg tagagccttc 180
tgcgctgggg ccgatgtcac ctcattgttt ggcgatccaa cccgtccccc ggcagtaatc 240tgcgctgggg ccgatgtcac ctcattgttt ggcgatccaa cccgtccccc ggcagtaatc 240
cgtgatgaac taaaacaagt atatgcgtct tttctgtcta tcgctgatct gacgattccc 300cgtgatgaac taaaacaagt atatgcgtct tttctgtcta tcgctgatct gacgattccc 300
accattgccg ccgtaggggg tattgctgtg ggagcgggag taaacatagc gatggcctgt 360accattgccg ccgtaggggg tattgctgtg ggagcgggag taaacatagc gatggcctgt 360
gacatggtcg ttgctgggcc aaaagccaaa ttcgctatca cttttgccga aatggggtta 420gacatggtcg ttgctgggcc aaaagccaaa ttcgctatca cttttgccga aatggggtta 420
catcctgggg gtgggtgttc ctggttcctt acaaggagga tggggggtca cagggcactg 480catcctgggg gtgggtgttc ctggttcctt acaaggagga tggggggtca cagggcactg 480
gcgaccctac ttgatgctga gaggattgat gcggaagaag cattcagggc cggattagtt 540gcgaccctac ttgatgctga gaggattgat gcggaagaag cattcagggc cggattagtt 540
acaaggctag tggaagatcc cgtggctgaa gcgctggcaa tggcacacag ctatgctgag 600acaaggctag tggaagatcc cgtggctgaa gcgctggcaa tggcacacag ctatgctgag 600
agagatcctg gccttgttcg tgatatgaaa agggcagtca gaatggcaga aaccgccgac 660agagatcctg gccttgttcg tgatatgaaa agggcagtca gaatggcaga aaccgccgac 660
ctagctactg tgctagaatt tgaaagctgg gcacaagcaa gtagcgtcaa tagcccaaga 720ctagctactg tgctagaatt tgaaagctgg gcacaagcaa gtagcgtcaa tagcccaaga 720
tttcaggagt tcctggcaga gtttgcagcg aggaaaaaca aaaaagaatg a 771tttcaggagt tcctggcaga gtttgcagcg aggaaaaaca aaaaagaatg a 771
<210> 4<210> 4
<211> 1158<211> 1158
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 4<400> 4
atgtctgatt tcgatttata tagaccgacc gaagagcatg aagcattaag ggaggccatt 60atgtctgatt tcgatttata tagaccgacc gaagagcatg aagcattaag ggaggccatt 60
aggtccgtgg cagaggataa aatagctcct cacgctgcag atgtggatga gcagagcagg 120aggtccgtgg cagaggataa aatagctcct cacgctgcag atgtggatga gcagagcagg 120
ttcccacaag aagcgtacga ggctctgcgt gcaagtgact tccacgctcc tcatgtggct 180ttcccacaag aagcgtacga ggctctgcgt gcaagtgact tccacgctcc tcatgtggct 180
gaagagtacg gcggtgtcgg cgctgatgcg ctggcgactt gtattgtaat tgaagaaatc 240gaagagtacg gcggtgtcgg cgctgatgcg ctggcgactt gtattgtaat tgaagaaatc 240
gccagagtat gtgcgagctc ctccttaatc ccagcagtga acaaattggg tagtatgcct 300gccagagtat gtgcgagctc ctccttaatc ccagcagtga acaaattggg tagtatgcct 300
ttgatactgt ctgggagtga cgaagtaaaa cagcgttact tgcccgaatt ggccagcgga 360ttgatactgt ctgggagtga cgaagtaaaa cagcgttact tgcccgaatt ggccagcgga 360
gaggctatgt ttagttatgg gctatctgaa agggaagctg gtagtgacac tgcctccatg 420gaggctatgt ttagttatgg gctatctgaa agggaagctg gtagtgacac tgcctccatg 420
agaactcgtg cggtgagaga cggggatgac tggatactga atggccaaaa gtcctggata 480agaactcgtg cggtgagaga cggggatgac tggatactga atggccaaaa gtcctggata 480
accaatgctg gaatttccaa gtactatacc gttatggctg taactgaccc agacggaccc 540accaatgctg gaatttccaa gtactatacc gttatggctg taactgaccc agacggaccc 540
aggggtagga atattagcgc atttgtagta cacatagatg atcccggttt tagtttcgga 600aggggtagga atattagcgc atttgtagta cacatagatg atcccggttt tagtttcgga 600
gaacctgaga gaaagctagg aataaagggg tctccaactc gtgagctaat cttcgataat 660gaacctgaga gaaagctagg aataaagggg tctccaactc gtgagctaat cttcgataat 660
gttaggattc cgggggatag attggtgggt aaggtcggtg aaggtttaag gactgctcta 720gttaggattc cgggggatag attggtgggt aaggtcggtg aaggtttaag gactgctcta 720
aggactttgg accatacgag ggtaactatt ggagctcaag ccgttgggat tgcgcagggc 780aggactttgg accatacgag ggtaactatt ggagctcaag ccgttgggat tgcgcagggc 780
gcattagatt acgcacttgg ttatgtaaag gagaggaagc agttcggtaa ggcaattgct 840gcattagatt acgcacttgg ttatgtaaag gagaggaagc agttcggtaa ggcaattgct 840
gacttccagg ggatccaatt catgctggct gatatggcca tgaaattaga ggctgcacgt 900gacttccagg ggatccaatt catgctggct gatatggcca tgaaattaga ggctgcacgt 900
cagatggtgt atgtcgccgc agcgaaatct gaacgtgatg acgccgactt atccttttac 960cagatggtgt atgtcgccgc agcgaaatct gaacgtgatg acgccgactt atccttttac 960
ggcgcggcag caaagtgctt tgcgtccgat gtcgcaatgg aaataaccac cgacgccgtt 1020ggcgcggcag caaagtgctt tgcgtccgat gtcgcaatgg aaataaccac cgacgccgtt 1020
cagttgttag gcgggtatgg atatactaga gactatccag tagaacgtat gatgcgtgat 1080cagttgttag gcgggtatgg atatactaga gactatccag tagaacgtat gatgcgtgat 1080
gccaaaataa cgcagatcta cgaaggtacg aatcagatcc aacgtgtagt catggcaagg 1140gccaaaataa cgcagatcta cgaaggtacg aatcagatcc aacgtgtagt catggcaagg 1140
cagctgctga aaaaatga 1158cagctgctga aaaaatga 1158
<210> 5<210> 5
<211> 879<211> 879
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 5<400> 5
atggctatct tcttaaccaa agactccaaa gtccttgtgc agggcatgac tgggagtgag 60atggctatct tcttaaccaa agactccaaa gtccttgtgc agggcatgac tgggagtgag 60
ggaacaaagc ataccagaag aatgttggca gccgggacaa acatagttgg cggggttaac 120ggaacaaagc ataccagaag aatgttggca gccgggacaa acatagttgg cggggttaac 120
ccgcgtaagg cgggtcaagt tgtggacttc gatggtacac aggtgcctgt attcggatca 180ccgcgtaagg cgggtcaagt tgtggacttc gatggtacac aggtgcctgt attcggatca 180
gtcgctgagg gtatgaaagc tactggtgcc gatgtcaccg ttatctttgt accgccgaaa 240gtcgctgagg gtatgaaagc tactggtgcc gatgtcaccg ttatctttgt accgccgaaa 240
tttgcaaaag atgctgtaat agaggcgatt gatgcggaga ttggtctagc tgtagttatc 300tttgcaaaag atgctgtaat agaggcgatt gatgcggaga ttggtctagc tgtagttatc 300
actgagggca ttccggttca tgataccgca accttctggg ctcatgcttg cagtaagggt 360actgagggca ttccggttca tgataccgca accttctggg ctcatgcttg cagtaagggt 360
aacaaaacac gtattattgg gcccaactgt cctgggctta ttactccagg ccaatcaaat 420aacaaaacac gtattattgg gcccaactgt cctgggctta ttactccagg ccaatcaaat 420
gcaggaataa tacccgccga tataacgaaa ccgggccgta ttggtcttgt aagtaagtcc 480gcaggaataa tacccgccga tataacgaaa ccgggccgta ttggtcttgt aagtaagtcc 480
ggtacgctaa cttatcagat gatgtacgag ctaagggata tcgggtttag cacttgtgta 540ggtacgctaa cttatcagat gatgtacgag ctaagggata tcgggtttag cacttgtgta 540
gggattggcg gggacccgat tatagggaca acccacattg acgcgctagc ggcttttgag 600gggattggcg gggacccgat tatagggaca acccacattg acgcgctagc ggcttttgag 600
gcagaccccg ataccgatgt tatcgttatg atcggcgaaa ttggcgggga tgccgaggaa 660gcagaccccg ataccgatgt tatcgttatg atcggcgaaa ttggcgggga tgccgaggaa 660
agggccgccg aatatataaa aaagcatgtt accaagccgg tagtcggtta catagctggt 720agggccgccg aatatataaa aaagcatgtt accaagccgg tagtcggtta catagctggt 720
ttcacagcac ctgagggtaa gactatgggg catgctggcg cgattgtatc tggtagctct 780ttcacagcac ctgagggtaa gactatgggg catgctggcg cgattgtatc tggtagctct 780
ggaacagccg ctgcgaagaa ggaggcgtta gaagccgtcg gagtaaaagt tggtaagact 840ggaacagccg ctgcgaagaa ggaggcgtta gaagccgtcg gagtaaaagt tggtaagact 840
ccgtctgagg ctgcgaaatt ggtgaggagt ttgttctaa 879ccgtctgagg ctgcgaaatt ggtgaggagt ttgttctaa 879
<210> 6<210> 6
<211> 1233<211> 1233
<212> DNA<212> DNA
<213> Saccharomyces cerevisiae<213> Saccharomyces cerevisiae
<400> 6<400> 6
atgaacgact tgaggagaaa ccccgcttct gagtcccaag gcagaactct ggtggatttg 60atgaacgact tgaggagaaa ccccgcttct gagtcccaag gcagaactct ggtggatttg 60
ttcgagtatc aggctaaggc gctatttgcg gaatatggcg tgcctgtccc acaagggaag 120ttcgagtatc aggctaaggc gctatttgcg gaatatggcg tgcctgtccc acaagggaag 120
gtggcctcaa cgccagaaga agtgcgtgct atcgcagagg agtttgcggc agcggggaag 180gtggcctcaa cgccagaaga agtgcgtgct atcgcagagg agtttgcggc agcggggaag 180
ccaagggtcg ttgtgaaggc gcaggttaag actggcggtc gtggaaaagc aggcggcgtg 240ccaagggtcg ttgtgaaggc gcaggttaag actggcggtc gtggaaaagc aggcggcgtg 240
aaggtggcgg atggtcccga tgacgccgtc gctaaagcaa aacaaatatt aggtatggat 300aaggtggcgg atggtcccga tgacgccgtc gctaaagcaa aacaaatatt aggtatggat 300
ataaaaggcc atactgttca tcgtgtactt gtagaggaag cgagcgatat agctgaagaa 360ataaaaggcc atactgttca tcgtgtactt gtagaggaag cgagcgatat agctgaagaa 360
tattacttta gttttctgtt agacagggcg aacagaagtt tcctttcaat ttgctcagcg 420tattacttta gttttctgtt agacagggcg aacagaagtt tcctttcaat ttgctcagcg 420
gaaggcggaa tggagattga ggaagtcgct gccacaaacc cggacgcagt cgcgaaggtt 480gaaggcggaa tggagattga ggaagtcgct gccacaaacc cggacgcagt cgcgaaggtt 480
ccgatctcac cccttaaagg tgcccctgcc gatgtggcgg cagacatcgt agctcagggt 540ccgatctcac cccttaaagg tgcccctgcc gatgtggcgg cagacatcgt agctcagggt 540
aaattgcctg aagctgccgc acagggggct gttgatgtta ttacgaaatt atggaaagta 600aaattgcctg aagctgccgc acagggggct gttgatgtta ttacgaaatt atggaaagta 600
tttgttgaga aggacgcgac ccttgtggaa gtgaatccac taattctgac aaaggatggt 660tttgttgaga aggacgcgac ccttgtggaa gtgaatccac taattctgac aaaggatggt 660
cgtgttgtgg ctttagacgg caaggtcaca ctagacgata atgcggagtt taggcaggat 720cgtgttgtgg ctttagacgg caaggtcaca ctagacgata atgcggagtt taggcaggat 720
ttggagtctc ttgcatctgc tgccgaaggt gatcctctag aagtaaaagc taaggagaaa 780ttggagtctc ttgcatctgc tgccgaaggt gatcctctag aagtaaaagc taaggagaaa 780
ggtctgaatt atgtaaagtt ggacggagaa gtgggtataa tcgggaatgg tgctggctta 840ggtctgaatt atgtaaagtt ggacggagaa gtgggtataa tcgggaatgg tgctggctta 840
gtaatgagta cattagacgt cgtggcctac gcgggagagc aacatggagg agtaaaacct 900gtaatgagta cattagacgt cgtggcctac gcgggagagc aacatggagg agtaaaacct 900
gcgaactttc tggatatcgg tggcggtgca tctgcggaag ttatggctaa tgggttggag 960gcgaactttc tggatatcgg tggcggtgca tctgcggaag ttatggctaa tgggttggag 960
ataattctgt ccgatcctgc agtgaagagt gtgtttgtta atgtctttgg cggcattaca 1020ataattctgt ccgatcctgc agtgaagagt gtgtttgtta atgtctttgg cggcattaca 1020
gcgtgcgacg cagtggcgaa tggcattgtt caagcactag agctgcttga gagtaggggg 1080gcgtgcgacg cagtggcgaa tggcattgtt caagcactag agctgcttga gagtaggggg 1080
gaggatgtga caaaacccct ggttgtaaga ttagacggga acaacgcgga actaggcagg 1140gaggatgtga caaaacccct ggttgtaaga ttagacggga acaacgcgga actaggcagg 1140
tcaatactga acgagaggaa ccatcctgcc gtacgtcaag ttgacacgat ggacggggca 1200tcaatactga acgagaggaa ccatcctgcc gtacgtcaag ttgacacgat ggacggggca 1200
gctgctctgg ccgcggaact agcggcgaaa taa 1233gctgctctgg ccgcggaact agcggcgaaa taa 1233
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| CN114107153A (en) * | 2021-11-26 | 2022-03-01 | 江南大学 | Recombinant bacterium for producing adipic acid, construction method and application |
| CN115058445A (en) * | 2022-06-28 | 2022-09-16 | 深圳技术大学 | Genetically modified saccharomyces cerevisiae capable of degrading oleic acid and construction method and application thereof |
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| CN115058445A (en) * | 2022-06-28 | 2022-09-16 | 深圳技术大学 | Genetically modified saccharomyces cerevisiae capable of degrading oleic acid and construction method and application thereof |
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