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CN117700369A - Preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester - Google Patents

Preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester Download PDF

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Publication number
CN117700369A
CN117700369A CN202311680368.2A CN202311680368A CN117700369A CN 117700369 A CN117700369 A CN 117700369A CN 202311680368 A CN202311680368 A CN 202311680368A CN 117700369 A CN117700369 A CN 117700369A
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China
Prior art keywords
acetic acid
preparation
compound
ester
chloropyrimidine
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Pending
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CN202311680368.2A
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Chinese (zh)
Inventor
魏志刚
王方道
王东
王猛
冒亚琴
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Chemvon Biotechnology Co ltd
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Chemvon Biotechnology Co ltd
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Priority to CN202311680368.2A priority Critical patent/CN117700369A/en
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D239/00Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings
    • C07D239/02Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings
    • C07D239/24Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members
    • C07D239/28Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, directly attached to ring carbon atoms
    • C07D239/30Halogen atoms or nitro radicals

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)

Abstract

The invention discloses a preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester, and belongs to the technical field of drug synthesis. Firstly, reacting 2-chloropyrimidine-5-carboxylic acid with oxalyl chloride to generate corresponding acyl chloride, and then reacting the acyl chloride with trimethylsilyl diazomethane to generate a compound 2; and finally rearranging the compound 2 in alcohol or water under the action of silver oxide to obtain the 2-chloropyridine-5-acetic acid/ester. The reagents and the raw materials used in the invention are available in the market, so that the preparation method of the pyrimidine compound with the special structure is provided, the preparation cost is greatly reduced, and various structural fragments are provided for new drug development enterprises at present.

Description

Preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester
Technical Field
The invention relates to the technical field of pharmaceutical chemistry production, in particular to a preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester.
Background
Pyrimidine is a basic nitrogen-containing heterocyclic organic compound, and its derivatives cytosine, uracil, thymine, etc. are important constituent components of nucleic acid. Three of the five bases forming DNA and RNA are pyrimidine derivatives: cytosine (Cytosine), thymine (Thymine), uracil (Uracil); the chemical structural formula is as follows:
where thymine can only be present in deoxyribonucleic acid, uracil can only be present in ribonucleic acid, and cytosine can be both.
Cytosine (Cytosine) is an important intermediate for fine chemical engineering, pesticides and medicines, is mainly used for synthesizing anti-AIDS medicines and anti-hepatitis B medicines lamivudine, anticancer medicines such as gemcitabine, enotabine, 5-fluorocytosine and the like in the field of medicines, and has very wide application. Both cytosine nucleosides and cytosine nucleotides can be used as drugs to raise leukocytes.
Thymine (Thymene) is a key intermediate for synthesizing anti-AIDS drugs AZT, DDT and related drugs. Thymidine is a biochemical reagent used in the preparation of biological media, such as HAT selective media.
Uracil (Uracil) is a drug, such as anti-anemia of giant red blood cells, treating liver; cerebral blood vessels; cardiovascular diseases, and the like, are also diseases in which fluorouracil (S-FC) is produced; deoxynucleosides; iodides (IDUR); bromoglycoside (BUDR); fluoroglycoside (FUDR) and other medicines.
Pyrimidine rings are therefore a ubiquitous building block in natural products, and synthetic analogues thereof also possess a broader range of physiological activities.
In the drug development stage, new drug development companies are interested in pyrimidine derivatives, and usually perform activity screening on pyrimidine rings and pyrimidine acetic acid derivatives, so as to try to find more effective active fragments. CHUGAI PHARMACEUTICAL CO LTD [ JP ] in the development of vitamin D compounds, a number of pyrimidine ring derivative containing structures have been prepared and screened, and these active molecules have been patented and protected, typically as follows:
ECCOGENE SHANGHAI CO LTD [ CN ] [ WO2022199661A1 ] the derivative screening of fragment 1 was also performed when GLP-1 receptor agonists and predatory drugs were developed to produce anti-HBV drugs. The synthesis of fragments is reported in patent EP18949111, but the required raw materials are not readily available and are costly.
In conclusion, pyrimidine derivatives are important components which are not negligible in modern drug development, have potential application values, but the preparation cost is high because of one more methylene, and the fragment 1 is a good investigation point for drug development from the aspects of activity investigation and structural diversity.
Disclosure of Invention
The invention aims to solve the problems that: by optimizing the synthesis route, the preparation cost of the target molecule TM is greatly reduced.
The synthetic route of the invention adopts a reaction equation as follows:
the first step: chlorination and substitution reactions
Firstly, reacting 2-chloropyrimidine-5-carboxylic acid with oxalyl chloride to generate corresponding acyl chloride, and then reacting the acyl chloride with trimethylsilyl diazomethane to generate a compound 2;
second, rearrangement reaction
Rearranging the compound 2 in alcohol or water under the action of silver oxide to obtain 2-chloropyridine-5-acetic acid/ester TM.
Further, in the above technical scheme, in the first step of the chlorination reaction, the reaction is performed in a chlorinated solvent, such as dichloromethane and dichloroethane; the nucleophilic substitution solvent is acetonitrile and tetrahydrofuran, acetonitrile and 2-methyltetrahydrofuran solvent.
Further, in the technical scheme, the molar ratio of the 2-chloropyrimidine-5-carboxylic acid, oxalyl chloride and trimethyl silicon diazomethane in the first step is 1:1.5-5:1-1.5.
Further, in the above technical scheme, the alcohol in the second step is selected from methanol, ethanol or benzyl alcohol.
Further, in the above technical scheme, the molar ratio of the compound 2 to the silver oxide in the second step is 1:0.01-0.20.
The reagents and materials used in the present invention are commercially available.
The invention has the positive progress effects that: the invention provides a preparation method of pyrimidine compounds with special structures, which greatly reduces the preparation cost and provides new diversity structural fragments for new drug development enterprises.
Detailed Description
The invention is further illustrated by means of the following examples, which are not intended to limit the scope of the invention. The experimental methods, in which specific conditions are not noted in the following examples, were selected according to conventional methods and conditions, or according to the commercial specifications.
Example 1 preparation of Compound 2
In a 3L three-necked flask, mechanical stirring was provided, starting material 1 (100 g,0.631 mol) and 1.5L of anhydrous dichloromethane were added, and mechanical stirring was started under nitrogen. Then cooling to 0 ℃, dropwise adding oxalyl chloride (110 mL,1.3 mol), wherein the internal temperature is lower than 10 ℃, adding 1mL of DMF after the dropwise adding, then reacting for 4 hours at 25 ℃ (the solid basically disappears to become a solution), and stopping the reaction when TLC detects the disappearance of the raw material. The low boiling point material was removed by concentrating under reduced pressure, 300mL of anhydrous methylene chloride was distilled off to obtain an acid chloride intermediate.
The acid chloride intermediate was dissolved in 500mL tetrahydrofuran and 500mL acetonitrile and cooled to 0deg.C, and 2M TMSCHN was added dropwise 2 N-hexane solution (380 mL,0.76 mol) was added, and the mixture was allowed to warm to room temperature for 2 hours. TLC detection, starting material disappeared, stopping the reaction. Cooling to 0deg.C, adding 100mL of acetic acid and 500mL of water, quenching, and extracting with ethyl acetate (500 mL) twice; the organic phases were combined, washed with saturated sodium bicarbonate, washed with saturated brine, dried over anhydrous sodium sulfate, filtered, and the filtrate was concentrated to give compound 2 (110 g) which was used directly in the next step. TLC: PE: EA=4:1, R f =0.23,254nm. 1 HNMR(400MHz,CDCl 3 )8.96(s,2H),5.94(s,1H).
Example 2 preparation of Compound TM (R=Me)
In a 3L three-necked flask, mechanical stirring was provided, and Compound 2 (110 g,0.602 mol), silver oxide (7.5 g,0.033 mol) and 1.5L of anhydrous methanol were added and refluxed under nitrogen for 16 hours. TLC detects the disappearance of starting material and stops the reaction. Cooled to room temperature, filtered, and the filtrate was concentrated and purified (PE: ea=6:1 to 5:1) to give 100g of the target product TM as a colorless liquid. The yield of the two steps is 85%. TLC: PE: ea=4:1, rf=0.25, 254nm. 1 HNMR(400MHz,CDCl 3 )8.58(s,2H),3.77(s,3H),3.65(s,2H).
Example 3 preparation of Compound TM (R=H)
In a 500mL three-necked flask, mechanical stirring was provided, and compound 2 (10 g,0.055 mol), silver oxide (2.5 g,11 mmol) and 100mL water were added and refluxed under nitrogen for 16 hours. TLC detects the disappearance of starting material and stops the reaction. Cooled to room temperature, filtered, and concentrated to give 5.2g of the desired product TM (r=h). The yield of the two steps is 48%.
Example 4 preparation of Compound TM (R=Et)
In a 500mL three-necked flask, mechanical stirring was provided, and compound 2 (10 g,0.055 mol), silver oxide (0.6 g,2.6 mmol) and 100mL absolute ethanol were added and refluxed under nitrogen for 16 hours. TLC detects the disappearance of starting material and stops the reaction. Cooled to room temperature, filtered, and the filtrate was concentrated and purified (PE: ea=6:1 to 5:1) to give 10.5g of the target product TM as a colorless liquid. The yield of the two steps is 76%.
Example 5 preparation of Compound TM (R=Bn)
In a 500mL three-necked flask, compound 2 (10 g,0.055 mol), silver oxide (1 g,4.3 mmol), benzyl alcohol (15 g,0.139 mol) and 100mL absolute ethanol were added with mechanical stirring and refluxed under nitrogen for 16 hours. TLC detects the disappearance of starting material and stops the reaction. Cooled to room temperature, filtered, and concentrated to give 11g of the desired product TM as pale yellow solid (r=bn). The yield of the two steps is 60%.
The foregoing description is only illustrative of the preferred embodiments of the present invention, and is not to be construed as limiting the invention, but is to be construed as limiting the invention to any and all simple modifications, equivalent variations and adaptations of the embodiments described above, which are within the scope of the invention, may be made by those skilled in the art without departing from the scope of the invention.

Claims (6)

1. A method for preparing 2- (2-chloropyrimidine-5-yl) acetic acid/ester, which is characterized by comprising the following steps:
the first step: chlorination and substitution reactions
Firstly, reacting 2-chloropyrimidine-5-carboxylic acid with oxalyl chloride to generate corresponding acyl chloride, and then reacting the acyl chloride with trimethylsilyl diazomethane to generate a compound 2;
second, rearrangement reaction
Rearranging the compound 2 in alcohol or water under the action of silver oxide to obtain 2-chloropyridine-5-acetic acid/ester TM.
2. The process for the preparation of 2- (2-chloropyrimidin-5-yl) acetic acid/ester according to claim 1, wherein: in the first step, the chlorination reaction is carried out in a chlorinated solvent; the nucleophilic substitution solvent is acetonitrile and tetrahydrofuran, acetonitrile and 2-methyltetrahydrofuran solvent.
3. The process for preparing 2- (2-chloropyrimidin-5-yl) acetic acid/ester according to claim 2, wherein: the chlorinated solvent is selected from dichloromethane and dichloroethane.
4. The process for the preparation of 2- (2-chloropyrimidin-5-yl) acetic acid/ester according to claim 1, wherein: the molar ratio of the 2-chloropyrimidine-5-carboxylic acid, oxalyl chloride and the trimethyl silicon diazomethane in the first step is 1:2-5:1-1.5.
5. The process for the preparation of 2- (2-chloropyrimidin-5-yl) acetic acid/ester according to claim 1, wherein: the alcohol in the second step is selected from methanol, ethanol or benzyl alcohol.
6. The process for the preparation of 2- (2-chloropyrimidin-5-yl) acetic acid/ester according to claim 1, wherein: the molar ratio of the compound 2 to the silver oxide in the second step is 1:0.05-0.20.
CN202311680368.2A 2023-12-08 2023-12-08 Preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester Pending CN117700369A (en)

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CN202311680368.2A CN117700369A (en) 2023-12-08 2023-12-08 Preparation method of 2- (2-chloropyrimidine-5-yl) acetic acid/ester

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CN117700369A true CN117700369A (en) 2024-03-15

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