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CN116694658A - Method for improving gamma-polyglutamic acid yield - Google Patents

Method for improving gamma-polyglutamic acid yield Download PDF

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CN116694658A
CN116694658A CN202310126003.9A CN202310126003A CN116694658A CN 116694658 A CN116694658 A CN 116694658A CN 202310126003 A CN202310126003 A CN 202310126003A CN 116694658 A CN116694658 A CN 116694658A
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polyglutamic acid
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冯劲
施庆珊
王玲玲
谢小保
周刚
崔银花
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Institute of Microbiology of Guangdong Academy of Sciences
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Abstract

本发明公开了一种提高γ‑聚谷氨酸产量的方法。该方法是通过突变基因rapA替换γ‑聚谷氨酸生产菌种中的rapA基因,使生产菌的γ‑聚谷氨酸产量显著提高。突变基因rapA的核苷酸序列如SEQ ID NO.1所示,第575位的碱基由A突变为G。贝莱斯芽孢杆菌PGA‑224含突变基因rapA,其保藏号为GDMCCNo.62295。本发明将突变的rapA基因替换γ‑聚谷氨酸生产菌种中rapA基因,γ‑聚谷氨酸产量显著提高。The invention discloses a method for increasing the output of γ-polyglutamic acid. In the method, the rapA gene in the gamma-polyglutamic acid producing strain is replaced by the mutant gene rapA, so that the yield of the gamma-polyglutamic acid of the producing strain is significantly increased. The nucleotide sequence of the mutant gene rapA is shown in SEQ ID NO.1, and the 575th base is mutated from A to G. Bacillus Velez PGA‑224 contains the mutant gene rapA, and its preservation number is GDMCCNo.62295. The present invention replaces the rapA gene in the gamma-polyglutamic acid producing strain with the mutated rapA gene, and significantly increases the gamma-polyglutamic acid production.

Description

一种提高γ-聚谷氨酸产量的方法A method for increasing the output of gamma-polyglutamic acid

技术领域technical field

本发明属于微生物技术领域,具体涉及一种提高γ-聚谷氨酸产量的方法。The invention belongs to the technical field of microorganisms, and in particular relates to a method for increasing the yield of gamma-polyglutamic acid.

背景技术Background technique

γ-聚谷氨酸是由微生物合成的一种胞外高聚物。它由谷氨酸单体通过γ-谷氨酰胺键聚合而成的一类均聚氨基酸,具有吸水性强、可降解、生物相容性强、无毒等优良特性,在工业、食品、医药、环境、农业、日化等行业都具有广阔的应用前景。γ-polyglutamic acid is an extracellular polymer synthesized by microorganisms. It is a type of homopolyamino acid polymerized from glutamic acid monomers through γ-glutamine bonds. It has excellent characteristics such as strong water absorption, degradability, strong biocompatibility, and non-toxicity. It is used in industry, food, and medicine. , environment, agriculture, daily chemical and other industries have broad application prospects.

γ-聚谷氨酸主要由芽孢杆菌属的细菌生产。γ-聚谷氨酸的工业生产主要由贝莱斯芽孢杆菌、枯草芽孢杆菌和地衣芽孢杆菌进行。现在提高γ-聚谷氨酸产量的方法主要在自然环境筛选高产菌株、调整培养基配方和基因编辑。改变发酵培养基方法提高幅度有限,筛选新菌种方法费时费力。基因编辑主要是敲除降解γ-聚谷氨酸的酶的基因、替换谷氨酸和γ-聚谷氨酸合成酶的启动子。但是编辑多个基因,周期长。rapA基因主要编码去磷酸化SpoOF~P蛋白。SpoOF~P蛋白能促使SpoOA磷酸化,SpoOA~P从而让菌体进入芽孢周期。而本发明另辟蹊径,通过突变的rapA基因替换γ-聚谷氨酸生产菌种中rapA基因,使该生产菌的γ-聚谷氨酸产量显著提高。γ-polyglutamic acid is mainly produced by bacteria belonging to the genus Bacillus. The industrial production of γ-polyglutamic acid is mainly carried out by Bacillus Velez, Bacillus subtilis and Bacillus licheniformis. The current methods to increase the production of γ-polyglutamic acid mainly screen high-yielding strains in natural environments, adjust medium formulations and gene editing. The improvement of the method of changing the fermentation medium is limited, and the method of screening new strains is time-consuming and laborious. Gene editing is mainly to knock out the gene of the enzyme that degrades γ-polyglutamic acid, and replace the promoter of glutamic acid and γ-polyglutamic acid synthetase. But editing multiple genes takes a long time. The rapA gene mainly encodes the dephosphorylated SpoOF~P protein. SpoOF~P protein can promote the phosphorylation of SpoOA, and SpoOA~P allows the bacteria to enter the spore cycle. However, the present invention finds another way to replace the rapA gene in the γ-polyglutamic acid producing strain with the mutated rapA gene, so that the γ-polyglutamic acid yield of the producing bacterium is significantly increased.

发明内容Contents of the invention

本发明的目的提供一种将一段突变的基因替换掉γ-聚谷氨酸生产菌种中rapA基因从而提高γ-聚谷氨酸产量的方法。The purpose of the present invention is to provide a method for replacing the rapA gene in the gamma-polyglutamic acid producing strain with a mutated gene so as to increase the yield of gamma-polyglutamic acid.

本发明的第一个目的是提供一种提高γ-聚谷氨酸产量的突变基因rapA,其核苷酸序列如SEQ ID NO.1所示。The first object of the present invention is to provide a mutant gene rapA that increases the production of γ-polyglutamic acid, the nucleotide sequence of which is shown in SEQ ID NO.1.

具体地,所述基因表达的蛋白为去磷酸化酶(rapA),rapA基因中的第575位的碱基由A突变为G,发生错义突变,该突变使其肽链192位氨基酸由天冬氨酸变为甘氨酸。Specifically, the protein expressed by the gene is a dephosphorylase (rapA). The 575th base in the rapA gene is mutated from A to G, and a missense mutation occurs. Partic acid becomes glycine.

本发明的第二个目的是提供含突变基因rapA的菌株。The second object of the present invention is to provide a strain containing the mutant gene rapA.

优选地,所述的菌株为贝莱斯芽孢杆菌PGA-224,保藏于广东省微生物菌种保藏中心(GDMCC);获得保藏号GDMCC No.62295;保藏日期:2022年3月16日;保藏地址:中国广东省广州市越秀区先烈中路100号59号楼五楼,邮编:510070。Preferably, the bacterial strain is Bacillus Velez PGA-224, which is preserved in the Guangdong Provincial Microbial Culture Collection Center (GDMCC); accession number GDMCC No.62295; preservation date: March 16, 2022; preservation address : 5th Floor, Building 59, No. 100, Xianlie Middle Road, Yuexiu District, Guangzhou City, Guangdong Province, China, 510070.

本发明的第三个目的是提供一种提高γ-聚谷氨酸产量的方法,其特征在于,包括以下步骤:通过突变基因rapA替换γ-聚谷氨酸生产菌种中的rapA基因,使生产菌的γ-聚谷氨酸产量显著提高。The third object of the present invention is to provide a method for improving the yield of γ-polyglutamic acid, which is characterized in that it comprises the following steps: replacing the rapA gene in the γ-polyglutamic acid production strain by the mutant gene rapA, so that The yield of gamma-polyglutamic acid of the producing bacteria is significantly increased.

优选地,所述方法包括以下步骤:Preferably, the method comprises the steps of:

(1)合成γ-聚谷氨酸生产菌基因组中rapA基因的sgRNA序列;(1) Synthesizing the sgRNA sequence of the rapA gene in the genome of the γ-polyglutamic acid producing bacteria;

(2)将sgRNA序列插入pJOE8999质粒得到pJOE8999-sgRNA;(2) Insert the sgRNA sequence into the pJOE8999 plasmid to obtain pJOE8999-sgRNA;

(3)对pJOE8999-sgRNA进行酶切;(3) Digest pJOE8999-sgRNA;

(4)扩增γ-聚谷氨酸生产菌的rapA基因的上下游同源序列;(4) amplifying the upstream and downstream homologous sequences of the rapA gene of the γ-polyglutamic acid producing bacteria;

(5)扩增所述的突变基因rapA序列;(5) amplifying the mutant gene rapA sequence;

(6)将酶切的pJOE8999-sgRNA质粒、扩增得到γ-聚谷氨酸生产菌的rapA基因的上下游同源序列片段和突变基因rapA序列片段进行同源重组,得到pJOE8999-sgRNA-rapA224质粒;(6) Perform homologous recombination on the digested pJOE8999-sgRNA plasmid, the amplified upstream and downstream homologous sequence fragments of the rapA gene of the γ-polyglutamic acid producing bacteria, and the mutant gene rapA sequence fragments to obtain pJOE8999-sgRNA-rapA224 plasmid;

(7)将pJOE8999-sgRNA-rapA224质粒转入γ-聚谷氨酸生产菌中,发酵培养生产γ-聚谷氨酸。(7) The pJOE8999-sgRNA-rapA224 plasmid was transformed into γ-polyglutamic acid producing bacteria, and fermented to produce γ-polyglutamic acid.

优选,具体步骤如下:Preferably, the specific steps are as follows:

(1)γ-聚谷氨酸生产菌基因组中rapA基因序列中紧接在5'-NGG PAM基序的前20个碱基的5’端前面加上tacg,互补序列的5’端前面加上aaac,从而得到sgRNA序列,合成sgRNA序列;(1) In the rapA gene sequence in the gamma-polyglutamic acid producing bacteria genome, tacg is added in front of the 5' end of the first 20 bases of the 5'-NGG PAM motif, and tacg is added in front of the 5' end of the complementary sequence. Go to aaac to get the sgRNA sequence and synthesize the sgRNA sequence;

(2)用BsaI单酶切pJOE8999质粒,并割胶回收;酶切的质粒与sgRNA序列链接,得到pJOE8999-sgRNA;(2) Digest the pJOE8999 plasmid with BsaI, and recover it by tapping the rubber; link the digested plasmid with the sgRNA sequence to obtain pJOE8999-sgRNA;

(3)对pJOE8999-sgRNA质粒进行SmaI和XbaI双酶切;(3) Carry out SmaI and XbaI double enzyme digestion to the pJOE8999-sgRNA plasmid;

(4)以γ-聚谷氨酸生产菌的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因的上下游同源序列;(4) using the genomic DNA of the gamma-polyglutamic acid-producing bacteria as a template, using PCR-specific primers to amplify the upstream and downstream homologous sequences of the rapA gene;

(5)以贝莱斯芽孢杆菌PGA-224的基因组DNA作为模板,使用PCR特异引物扩增得到突变基因rapA基因序列;(5) Using the genomic DNA of Bacillus Velez PGA-224 as a template, amplify the mutant gene rapA gene sequence using PCR-specific primers;

(6)将酶切的pJOE8999-sgRNA质粒、扩增得到γ-聚谷氨酸生产菌的rapA基因的上下游同源序列片段和扩增得到贝莱斯芽孢杆菌PGA-224的突变基因rapA序列片段进行同源重组,得到pJOE8999-sgRNA-rapA224质粒;(6) The digested pJOE8999-sgRNA plasmid, amplified to obtain the upstream and downstream homologous sequence fragments of the rapA gene of the gamma-polyglutamic acid-producing bacterium, and the amplified sequence of the mutant gene rapA of Bacillus Velez PGA-224 The fragment was subjected to homologous recombination to obtain the pJOE8999-sgRNA-rapA224 plasmid;

(7)将pJOE8999-sgRNA-rapA224质粒转入γ-聚谷氨酸生产菌中,30℃,在含有20μg/mL卡那霉素和1.0g/L甘露糖的LB板上选择转化体;将平板上生长的阳性突变体转移到普通LB平板上,以在45℃下消除质粒;然后使用验证引物通过菌落PCR筛选阳性克隆;将阳性克隆进行发酵培养生产γ-聚谷氨酸。(7) Transform the pJOE8999-sgRNA-rapA224 plasmid into γ-polyglutamic acid producing bacteria, and select transformants on LB plates containing 20 μg/mL kanamycin and 1.0 g/L mannose at 30°C; The positive mutants grown on the plate were transferred to common LB plates to eliminate the plasmid at 45°C; then the positive clones were screened by colony PCR using the verified primers; the positive clones were fermented to produce γ-polyglutamic acid.

优选地,所述的验证引物的序列为:rapA-y-F:ATGAAGCAGACTATTCCGTCCT和rapA-y-R:TAGACAATCTCCTCTCTGGATT。Preferably, the sequences of the verification primers are: rapA-y-F: ATGAAGCAGACTATTCCGTCCT and rapA-y-R: TAGACAATCTCCCTCTCTGGATT.

优选地,所述的γ-聚谷氨酸生产菌为枯草芽孢杆菌、地衣芽孢杆菌或贝莱斯芽孢杆菌。Preferably, the γ-polyglutamic acid-producing bacteria are Bacillus subtilis, Bacillus licheniformis or Bacillus Velez.

本发明的第四个目的是提供所述的突变基因rapA、所述的菌株贝莱斯芽孢杆菌PGA-224在提高γ-聚谷氨酸产量中的应用。The fourth object of the present invention is to provide the application of the mutant gene rapA and the bacterial strain Bacillus velesi PGA-224 in improving the yield of γ-polyglutamic acid.

本发明的有益效果为:将突变的rapA基因替换γ-聚谷氨酸生产菌种中rapA基因,生产菌的γ-聚谷氨酸产量显著提高。地衣芽孢杆菌ATCC9945a的γ-聚谷氨酸达29.54g/L,经基因编辑后的地衣芽孢杆菌ATCC9945a-224rapA的γ-聚谷氨酸达35.54g/L,γ-聚谷氨酸产量明显提高。The beneficial effects of the invention are: the rapA gene in the gamma-polyglutamic acid producing strain is replaced by the mutated rapA gene, and the yield of the gamma-polyglutamic acid of the producing strain is significantly increased. The γ-polyglutamic acid of Bacillus licheniformis ATCC9945a reached 29.54g/L, and the γ-polyglutamic acid of Bacillus licheniformis ATCC9945a-224rapA after gene editing reached 35.54g/L, and the yield of γ-polyglutamic acid was significantly increased .

Bacillus velezensis PGA-224保藏于广东省微生物菌种保藏中心(GDMCC);获得保藏号GDMCC No.62295;保藏日期:2022年3月16日;保藏地址:中国广东省广州市越秀区先烈中路100号59号楼五楼,邮编:510070。Bacillus velezensis PGA-224 was deposited in Guangdong Microbial Culture Collection Center (GDMCC); accession number GDMCC No.62295; preservation date: March 16, 2022; preservation address: No. 100, Xianlie Middle Road, Yuexiu District, Guangzhou City, Guangdong Province, China 5th Floor, Building 59, Zip Code: 510070.

具体实施方式Detailed ways

以下实施例是对本发明的进一步说明,而不是对本发明的限制。The following examples are to further illustrate the present invention, rather than limit the present invention.

以下实施例中的地衣芽孢杆菌为地衣芽孢杆菌Bacillus licheniformisATCC9945a,其保藏编号:ATCC No:9945a。枯草芽孢杆菌为枯草芽孢杆菌(Bacillus subtilis)PGA-7,其保藏编号为:CCTCC NO:M206102,该菌株公开于专利CN200610122640.5,发明名称γ-聚谷氨酸产生菌及利用该菌株制备γ-聚谷氨酸的方法的专利中。The Bacillus licheniformis in the following examples is Bacillus licheniformis ATCC9945a, its deposit number: ATCC No: 9945a. Bacillus subtilis is Bacillus subtilis (Bacillus subtilis) PGA-7, its preservation number is: CCTCC NO: M206102, the strain is disclosed in the patent CN200610122640.5, the invention name is γ-polyglutamic acid producing bacteria and using the strain to prepare γ - In the patent of the method of polyglutamic acid.

实施例1:Example 1:

出发菌株贝莱斯芽孢杆菌PGA-7.1菌种接种在固体培养基平板上,37℃培养24h。用2mL无菌水将平板上菌体洗脱下来。然后与脱脂牛奶混合,使脱脂牛奶的终浓度为体积分数10%。分装1.5mL菌液入2mL冻存管,然后置于4℃,30min,再置于-20℃,90min,然后置于-80℃过夜。最后冷冻干燥,干燥包装完成后移送北京航天公司。以另1管冷冻干燥菌粉作为地面对照菌株。发射前对照组样品置于4℃冰箱中,飞船升空后,将对照样品置于自然环境;取回搭载样品后与搭载样品同时置于4℃冰箱。搭载后样品的菌体培养物洗脱到10mL无菌水中,稀释梯度涂固体培养基平板,培养24-48h后,挑单菌落,孔板初筛。所述的固体培养基的成分:蛋白胨10g/L,牛肉膏3g/L,氯化钠5g/L,琼脂20g/L,余量为水,pH 7.0~7.2;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。The starting strain Bacillus veleisi PGA-7.1 was inoculated on a solid medium plate and cultured at 37°C for 24h. The bacteria on the plate were eluted with 2 mL of sterile water. Then mix with skimmed milk so that the final concentration of skimmed milk is 10% by volume. Aliquot 1.5mL bacterial solution into 2mL cryovials, then place at 4°C for 30min, then place at -20°C for 90min, then place at -80°C overnight. Finally, freeze-dry and transfer to Beijing Aerospace Corporation after drying and packaging. Another tube of freeze-dried bacterial powder was used as the ground control strain. The samples of the control group were placed in a 4°C refrigerator before launch, and the control samples were placed in the natural environment after the spacecraft lifted off; The bacterial culture of the sample after loading was eluted into 10mL sterile water, diluted and gradiently coated on a solid medium plate, and after culturing for 24-48 hours, a single colony was picked, and the orifice plate was initially screened. The composition of the solid medium: peptone 10g/L, beef extract 3g/L, sodium chloride 5g/L, agar 20g/L, the balance is water, pH 7.0-7.2; the preparation method is to mix the above ingredients evenly Finally, adjust the pH value, and then sterilize for later use.

将半固体发酵培养基融化,取100μL融化的培养基加入96孔培养板中,融化的培养基液面离孔板盖的距离为5mm。所述的半固体发酵培养基的成分:培养基的配方每升含有:甘油30g/L,蛋白胨50g/L,柠檬酸15g/L,七水硫酸镁0.6g/L,磷酸氢二钾1g/L,氯化铵7g/L,一水硫酸锰0.104g/L和琼脂2g/L,余量为水,pH 6.5。The semi-solid fermentation medium was melted, and 100 μL of the melted medium was added to a 96-well culture plate, and the distance between the liquid surface of the melted medium and the lid of the well plate was 5 mm. The composition of the semi-solid fermentation medium: the formula of the medium contains per liter: glycerol 30g/L, peptone 50g/L, citric acid 15g/L, magnesium sulfate heptahydrate 0.6g/L, dipotassium hydrogen phosphate 1g/L L, ammonium chloride 7g/L, manganese sulfate monohydrate 0.104g/L and agar 2g/L, the balance is water, pH 6.5.

待孔板中培养基凝结后,将营养琼脂的平板上单菌落用牙签挑进装有半固体发酵培养基的96孔培养板的孔中,盖好孔板盖。再将孔板倒置放入相对湿度维持80%以上的培养箱中37℃培养96h。γ-聚谷氨酸是分泌到细胞外的产物,并且γ-聚谷氨酸具有较大的粘性。当孔板倒置培养时,如果γ-聚谷氨酸产量大积累较多时,自身重力大于其粘力时,重力作用产物就会滴落到孔板盖上;如果γ-聚谷氨酸产量少,自身重力小于其粘力时,产物只能粘在孔板中。因此,肉眼观察孔板盖是否有液体状产物,有液体状产物的孔板盖位置对应的孔接入的菌株为高产γ-聚谷氨酸菌。由此筛选出高产γ-聚谷氨酸的贝莱斯芽孢杆菌(Bacillus velezensis)PGA-224。贝莱斯芽孢杆菌PGA-224保藏于广东省微生物菌种保藏中心(GDMCC);获得保藏号GDMCC No.62295;保藏日期:2022年3月16日;保藏地址:中国广东省广州市越秀区先烈中路100号59号楼五楼,邮编:510070。After the culture medium in the orifice plate is condensed, use a toothpick to pick a single colony on the nutrient agar plate into the well of a 96-well culture plate containing a semi-solid fermentation medium, and cover the orifice plate well. The orifice plate was then inverted and placed in an incubator with a relative humidity above 80% for 96 hours at 37°C. γ-polyglutamic acid is a product that is secreted extracellularly, and γ-polyglutamic acid has relatively high viscosity. When the orifice plate is cultured upside down, if the output of γ-polyglutamic acid is large and accumulates more, when its own gravity is greater than its viscosity, the product of gravity will drop on the cover of the orifice plate; if the output of γ-polyglutamic acid is small , when its own gravity is less than its adhesive force, the product can only stick in the orifice plate. Therefore, visually observe whether there is a liquid product on the orifice plate cover, and the strain inserted into the hole corresponding to the position of the orifice plate cover with the liquid product is a high-yielding γ-polyglutamic acid bacteria. Thus, Bacillus velezensis PGA-224 with high yield of γ-polyglutamic acid was screened out. Bacillus Velez PGA-224 was deposited in Guangdong Microbial Culture Collection Center (GDMCC); accession number GDMCC No.62295; date of preservation: March 16, 2022; address of preservation: martyrs, Yuexiu District, Guangzhou City, Guangdong Province, China 5th Floor, Building 59, No. 100 Middle Road, Zip Code: 510070.

实施例2:Example 2:

将筛选出贝莱斯芽孢杆菌PGA-224菌种接种在固体培养基斜面上,37℃培养16~24h,得到活化的贝莱斯芽孢杆菌PGA-224菌种。所述的固体培养基的成分:培养基的配方每升含有:蛋白胨10g/L,牛肉膏3g/L,氯化钠5g/L,琼脂20g/L,余量为水,pH 7.0~7.2;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。Inoculate the screened Bacillus Velez PGA-224 strain on a solid medium slant, and culture at 37°C for 16-24 hours to obtain activated Bacillus Velez PGA-224 strain. The composition of the solid medium: the formula of the medium contains per liter: peptone 10g/L, beef extract 3g/L, sodium chloride 5g/L, agar 20g/L, the balance is water, pH 7.0-7.2; The preparation method is to mix the above ingredients evenly, adjust the pH value, and then sterilize for future use.

种子液的制备:取2环上述活化的贝莱斯芽孢杆菌PGA-224菌种,接入装有50mL发酵培养基的300mL三角瓶中,37℃,100r/min振荡培养18h,得到贝莱斯芽孢杆菌PGA-224种子液。所述的发酵培养基的成分:培养基的配方每升含有:柠甘油30g,蛋白胨50g,柠檬酸15g,七水硫酸镁0.6g,磷酸氢二钾1g,氯化铵7g和一水硫酸锰0.104g,余量为水,pH 6.5;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。Preparation of seed solution: Take 2 rings of the above-mentioned activated Bacillus Velez PGA-224 strain, insert it into a 300mL Erlenmeyer flask containing 50mL of fermentation medium, and culture it with shaking at 100r/min at 37°C for 18h to obtain Velez Bacillus PGA-224 seed solution. The composition of the fermentation medium: the formula of the medium contains per liter: 30 g of limonine glycerin, 50 g of peptone, 15 g of citric acid, 0.6 g of magnesium sulfate heptahydrate, 1 g of dipotassium hydrogen phosphate, 7 g of ammonium chloride and manganese sulfate monohydrate 0.104g, the balance is water, pH 6.5; the preparation method is to mix the above ingredients evenly, adjust the pH value, and then sterilize for later use.

液体摇瓶发酵:按上述按配方配制发酵培养基分装50mL入300mL三角瓶,将贝莱斯芽孢杆菌PGA-224种子液按照接种量为体积分数10%接种到发酵培养基中,发酵温度37℃。在旋转式摇床振荡培养7d,摇床转速250r/min。发酵完毕,检测γ-聚谷氨酸(检测方法是现有技术,如专利CN200610122640.5,发明名称γ-聚谷氨酸产生菌及利用该菌株制备γ-聚谷氨酸的方法的测试方法)的产量为9.543g/L。Liquid shake flask fermentation: Prepare 50 mL of the fermentation medium according to the formula above and put it into a 300 mL Erlenmeyer flask, inoculate the seed solution of Bacillus Velesi PGA-224 into the fermentation medium according to the inoculum volume fraction of 10%, and the fermentation temperature is 37 ℃. The culture was shaken on a rotary shaker for 7 days, and the speed of the shaker was 250r/min. Fermentation completes, detection gamma-polyglutamic acid (detection method is prior art, such as patent CN200610122640.5, invention name gamma-polyglutamic acid producing bacterium and the testing method of the method utilizing this bacterial strain to prepare gamma-polyglutamic acid ) yield of 9.543g/L.

实施例3:Example 3:

1环活化的贝莱斯芽孢杆菌PGA-224和出发菌贝莱斯芽孢杆菌PGA-7.1,分别接入装有50mL营养肉汤培养基的300mL三角瓶中,37℃,100r/min振荡培养18h,所述的营养肉汤培养基的成分:蛋白胨10g/L,牛肉膏3g/L,氯化钠5g/L,琼脂20g/L,余量为水,pH 7.0~7.2;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。8000r/min离心10min(4℃),弃上清,沉淀用无菌水洗2次后液氮冷冻,干冰送样,出发菌贝莱斯芽孢杆菌PGA-7.1用于全基因组测序和诱变突变菌株贝莱斯芽孢杆菌PGA-224基因组重测序,分析贝莱斯芽孢杆菌PGA-224突变位点。突变位点为rapA基因中的第575位的碱基由A突变为G,发生错义突变,其突变后编码基因序列如SEQ ID NO.1所示。The 1-ring activated Bacillus velesi PGA-224 and the starting bacterium Bacillus velesii PGA-7.1 were respectively inserted into 300mL Erlenmeyer flasks containing 50mL nutrient broth medium, and cultured at 37°C with shaking at 100r/min for 18h , the composition of described nutrient broth medium: peptone 10g/L, beef extract 3g/L, sodium chloride 5g/L, agar 20g/L, surplus is water, pH 7.0~7.2; After the ingredients are mixed evenly, the pH value is adjusted, and then sterilized for later use. Centrifuge at 8000r/min for 10min (4°C), discard the supernatant, wash the precipitate twice with sterile water, freeze in liquid nitrogen, and send the sample on dry ice. The starting bacterium, Bacillus Velesi PGA-7.1, is used for whole-genome sequencing and mutagenesis Genome resequencing of Bacillus Velez PGA-224 to analyze the mutation site of Bacillus Velez PGA-224. The mutation site is that the 575th base in the rapA gene is mutated from A to G, and a missense mutation occurs, and the coding gene sequence after the mutation is shown in SEQ ID NO.1.

贝莱斯芽孢杆菌PGA-224的突变rapA基因(1137bp),其核苷酸序列如SEQ ID NO.1所示。The nucleotide sequence of the mutant rapA gene (1137bp) of Bacillus Velez PGA-224 is shown in SEQ ID NO.1.

实施例4:Example 4:

对地衣芽孢杆菌ATCC No:9945a进行基因编辑:Gene editing of Bacillus licheniformis ATCC No: 9945a:

(1)合成地衣芽孢杆菌ATCC No:9945a的rapA基因的sgRNA序列,sgRNA-F:tacgTACGGACGCCGAAATGCTGA,sgRNA-R:aaacTCAGCATTTCGGCGTCCGTA。(1) Synthesize the sgRNA sequence of the rapA gene of Bacillus licheniformis ATCC No: 9945a, sgRNA-F: tacgTACGGACGCCGAAATGCTGA, sgRNA-R: aaacTCAGCATTTCGGCGTCCGTA.

(2)用BsaI单酶切pJOE8999质粒(从上海海吉浩格生物科技购买所得),并割胶回收;酶切的质粒与sgRNA序列链接,得到pJOE8999-sgRNA。(2) The pJOE8999 plasmid (purchased from Shanghai Haijihaoge Biotechnology Co., Ltd.) was single-digested with BsaI, and recovered by tapping rubber; the digested plasmid was linked with the sgRNA sequence to obtain pJOE8999-sgRNA.

(3)对pJOE8999-sgRNA质粒进行SmaI和XbaI双酶切,并割胶回收。(3) The pJOE8999-sgRNA plasmid was double digested with SmaI and XbaI, and recovered by tapping rubber.

(4)以地衣芽孢杆菌ATCC No:9945a的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因的上下游同源序列,长度分别为800bp,胶回收扩增序列。该引物分别为:(4) Using the genomic DNA of Bacillus licheniformis ATCC No: 9945a as a template, PCR-specific primers were used to amplify the upstream and downstream homologous sequences of the rapA gene, each with a length of 800 bp, and the amplified sequences were recovered from the gel. The primers are:

上游同源序列的扩增引物是:Primers for amplification of upstream homologous sequences are:

rapA-U-F:gtcgacggccaacgaggcccgggCGGCGCCGGGAACTGTCGCCAArapA-U-F: gtcgacggccaacgaggcccgggCGGCGCCGGGAACTGTCGCCAA

rapA-U-R:gacggaatagtctgcttcatCCCTTACGCCCCTTCCTTTTATrapA-U-R: gacggaatagtctgcttcatCCCTTACGCCCCTTCCTTTTTAT

下游同源序列的扩增引物是:The primers for amplification of downstream homologous sequences are:

rapA-D-F:tccagagaggagattgtctaTATGAAATCTAAACTGTTGTTArapA-D-F: tccagagaggagattgtctaTATGAAATCTAAACTGTTGTTA

rapA-D-R:gatgaagattatttcttaatctagaCGGGTGACTGATGGATCAGCCTrap A-D-R: gatgaagattatttcttaatctagaCGGGTGACTGATGGATCAGCCT

(5)以贝莱斯芽孢杆菌PGA-224的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因序列,胶回收扩增序列。该引物分别为:(5) Using the genomic DNA of Bacillus Velez PGA-224 as a template, the rapA gene sequence was amplified using PCR-specific primers, and the amplified sequence was recovered from the gel. The primers are:

224rapA-F:aaaaggaaggggcgtaagggATGAAGCAGACTATTCCGTCCT224rapA-F: aaaaggaaggggcgtaagggATGAAGCAGACTATTCCGTCCT

224rapA-R:acaacagtttagatttcataTAGACAATCTCCTCTCTGGATT224 rap A-R: acaacagtttagatttcataTAGACAATCTCCCTCTCTGGATT

(6)酶切后的pJOE8999-sgRNA质粒、扩增得到地衣芽孢杆菌的rapA基因的上下游同源序列片段和扩增得到贝莱斯芽孢杆菌PGA-224的rapA基因序列片段加入重组酶,50℃孵育15分钟。然后将重组产物转入大肠杆菌,50μg/mL卡那霉素的LB板上选择转化体。再用rapA-U-F和rapA-D-R进行菌体PCR验证,PCR产物为2600bp为正确阳性的重组转化体。正确的阳性的重组转化体在50μg/mL卡那霉素的LB液体中37℃培养过夜。最后收集菌体,提质粒,得到pJOE8999-sgRNA-rapA224质粒。(6) The pJOE8999-sgRNA plasmid after digestion, the amplified upstream and downstream homologous sequence fragments of the rapA gene of Bacillus licheniformis and the amplified sequence fragments of the rapA gene of Bacillus Velez PGA-224 were added to the recombinase, 50 Incubate for 15 minutes at °C. Then the recombinant product was transformed into Escherichia coli, and the transformants were selected on LB plates with 50 μg/mL kanamycin. Then use rapA-U-F and rapA-D-R to carry out bacterial PCR verification, and the PCR product is 2600bp, which is a correct positive recombinant transformant. Correct positive recombinant transformants were cultured overnight at 37°C in 50 μg/mL kanamycin LB liquid. Finally, the bacteria were collected, and the plasmid was extracted to obtain the pJOE8999-sgRNA-rapA224 plasmid.

(7)将pJOE8999-sgRNA-rapA224质粒转入地衣芽孢杆菌中。在30℃下,在含有20μg/mL卡那霉素和1.0g/L甘露糖的LB板上选择转化体。将平板上生长的阳性突变体转移到普通LB平板上,以在45℃下消除质粒。然后使用验证引物通过菌落PCR筛选几个克隆。获得经基因编辑后的地衣芽孢杆菌ATCC9945a-224rapA菌种。所述验证引物的序列为:(7) The pJOE8999-sgRNA-rapA224 plasmid was transformed into Bacillus licheniformis. Transformants were selected on LB plates containing 20 μg/mL kanamycin and 1.0 g/L mannose at 30°C. Positive mutants grown on the plate were transferred to common LB plates to eliminate plasmids at 45 °C. Several clones were then screened by colony PCR using validated primers. The gene-edited Bacillus licheniformis ATCC9945a-224rapA strain was obtained. The sequence of the verification primer is:

rapA-y-F:ATGAAGCAGACTATTCCGTCCTrapA-y-F: ATGAAGCAGACTATTCCGTCCT

rapA-y-R:TAGACAATCTCCTCTCTGGATTrapA-y-R: TAGACAATCTCCCTCTCTGGATT

实施例5:Example 5:

地衣芽孢杆菌ATCC9945a-224rapA菌种的活化的制备步骤与实施例2相同。The preparation steps for the activation of the Bacillus licheniformis ATCC9945a-224rapA strain are the same as in Example 2.

地衣芽孢杆菌ATCC9945a-224rapA种子液的制备:取2环上述活化的地衣芽孢杆菌ATCC9945a-224rapA菌种,接入发酵培养基中,在37℃摇床振荡培养18h,摇床转速200r/min,此为种子液。所述发酵培养基的成分:柠檬酸12g/L,甘油80g/L,L-谷氨酸20g/L,氯化铵7g/L,磷酸氢二钾0.5g/L,七水硫酸镁0.5g/L,二水氯化钙0.15g/L,一水硫酸锰0.104g/L,六水氯化铁0.04g/L,余量为水,调pH为6.5;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。Preparation of Bacillus licheniformis ATCC9945a-224rapA seed solution: Take 2 rings of the above-mentioned activated Bacillus licheniformis ATCC9945a-224rapA strain, insert them into the fermentation medium, shake and cultivate at 37°C for 18 hours, and the shaker speed is 200r/min. for the seed liquid. The composition of the fermentation medium: citric acid 12g/L, glycerol 80g/L, L-glutamic acid 20g/L, ammonium chloride 7g/L, dipotassium hydrogen phosphate 0.5g/L, magnesium sulfate heptahydrate 0.5g /L, calcium chloride dihydrate 0.15g/L, manganese sulfate monohydrate 0.104g/L, ferric chloride hexahydrate 0.04g/L, the balance is water, adjust the pH to 6.5; the preparation method is to mix the above ingredients evenly Finally, adjust the pH value, and then sterilize for later use.

液体摇瓶发酵:发酵培养基分装50mL入300mL三角瓶,将地衣芽孢杆菌ATCC9945a-224rapA种子液按接种量为体积分数10%接入到发酵培养基中,发酵温度37℃,在摇床振荡培养96h,摇床转速200r/min。检测γ-聚谷氨酸的产量为35.54g/L。Liquid shake flask fermentation: divide 50mL of the fermentation medium into a 300mL Erlenmeyer flask, insert the seed solution of Bacillus licheniformis ATCC9945a-224rapA into the fermentation medium according to the inoculum volume fraction of 10%, the fermentation temperature is 37°C, and shake on the shaker Cultivate for 96 hours, the shaker rotates at 200r/min. The output of gamma-polyglutamic acid was detected to be 35.54g/L.

实施例6:Embodiment 6:

对枯草芽孢杆菌PGA-7进行基因编辑:Gene editing of Bacillus subtilis PGA-7:

(1)合成枯草芽孢杆菌的rapA基因的sgRNA序列,sgRNA-F:tacgAAAGGGGGGATATATAATCT,sgRNA-R:aaacAGATTATATATCCCCCCTTTA。(1) Synthesize the sgRNA sequence of the rapA gene of Bacillus subtilis, sgRNA-F: tacgAAAGGGGGGATATATAATCT, sgRNA-R: aaacAGATTATATATCCCCCTTTA.

(2)用BsaI单酶切pJOE8999质粒,并割胶回收;酶切的质粒与sgRNA序列链接,得到pJOE8999-sgRNA。(2) The pJOE8999 plasmid was single-digested with BsaI, and recovered by tapping the rubber; the digested plasmid was linked with the sgRNA sequence to obtain pJOE8999-sgRNA.

(3)对pJOE8999-sgRNA质粒进行SmaI和XbaI双酶切,并割胶回收。(3) The pJOE8999-sgRNA plasmid was double digested with SmaI and XbaI, and recovered by tapping rubber.

(4)以枯草芽孢杆菌PGA-7的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因的上下游同源序列,长度分别为800bp,胶回收扩增序列。该引物分别为:(4) Using the genomic DNA of Bacillus subtilis PGA-7 as a template, PCR-specific primers were used to amplify the upstream and downstream homologous sequences of the rapA gene, each with a length of 800 bp, and the amplified sequences were recovered from the gel. The primers are:

上游同源序列的扩增引物是:Primers for amplification of upstream homologous sequences are:

rapA-U-F:gtcgacggccaacgaggcccgggGCCGCTCCCCCCACACCCGTCArapA-U-F: gtcgacggccaacgaggcccgggGCCGCTCCCCCCCACACCCGTCA

rapA-U-R:aatagtctgcttcatCCTCAATAAATCCCCCCTTTTGrapA-U-R: aatagtctgcttcatCCTCAATAAATCCCCCCTTTTG

下游同源序列的扩增引物是:The primers for amplification of downstream homologous sequences are:

rapA-D-F:ctatatgaaatctaaACTGTTGTCAGGATTGCTGCTArapA-D-F: ctatatgaaatctaaACTGTTGTCAGGATTGCTGCTA

rapA-D-R:gatgaagattatttcttaatctagaTCGCTGTTTCCCGTCATATAGCrapA-D-R: gatgaagattatttcttaatctagaTCGCTGTTTCCCGTCATATAGC

(5)以贝莱斯芽孢杆菌PGA-224的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因序列,胶回收扩增序列。该引物分别为:(5) Using the genomic DNA of Bacillus Velez PGA-224 as a template, the rapA gene sequence was amplified using PCR-specific primers, and the amplified sequence was recovered from the gel. The primers are:

224rapA-F:ggggatttattgaggATGAAGCAGACTATTCCGTCCT224rapA-F: ggggatttattgaggATGAAGCAGACTATTCCGTCCT

224rapA-R:aatcctgacaacagtTTAGATTTCATATAGACAATCT224rapA-R: aatcctgacaacagtTTAGATTTCATATAGACAATCT

(6)将酶切的pJOE8999-sgRNA质粒、扩增得到枯草芽孢杆菌PGA-7的rapA基因的上下游同源序列片段和扩增得到贝莱斯芽孢杆菌PGA-224的rapA基因序列片段进行同源重组,得到pJOE8999-sgRNA-rapA224质粒。(6) The pJOE8999-sgRNA plasmid digested, the amplified upstream and downstream homologous sequence fragments of the rapA gene of Bacillus subtilis PGA-7, and the amplified rapA gene sequence fragments of Bacillus Velez PGA-224 were subjected to homologation. source recombination to obtain the pJOE8999-sgRNA-rapA224 plasmid.

(7)将pJOE8999-sgRNA-rapA224质粒转入枯草芽孢杆菌PGA-7中。在30℃下,在含有20μg/mL卡那霉素和1.0g/L甘露糖的LB板上选择转化体。将平板上生长的阳性突变体转移到普通LB平板上,以在45℃下消除质粒。然后使用验证引物通过菌落PCR筛选几个克隆。获得经基因编辑后的枯草芽孢杆菌PGA-7-224rapA菌种。所述验证引物的序列为:(7) The pJOE8999-sgRNA-rapA224 plasmid was transformed into Bacillus subtilis PGA-7. Transformants were selected on LB plates containing 20 μg/mL kanamycin and 1.0 g/L mannose at 30°C. Positive mutants grown on the plate were transferred to common LB plates to eliminate plasmids at 45 °C. Several clones were then screened by colony PCR using validated primers. The gene-edited Bacillus subtilis PGA-7-224rapA strain was obtained. The sequence of the verification primer is:

rapA-y-F:ATGAAGCAGACTATTCCGTCCTrapA-y-F: ATGAAGCAGACTATTCCGTCCT

rapA-y-R:TAGACAATCTCCTCTCTGGATTrapA-y-R: TAGACAATCTCCCTCTCTGGATT

实施例7:Embodiment 7:

枯草芽孢杆菌PGA-7-224rapA菌种的活化的制备步骤与实施例2相同。The preparation steps for the activation of the Bacillus subtilis PGA-7-224rapA strain are the same as in Example 2.

枯草芽孢杆菌PGA-7-224rapA种子液的制备:取2环上述活化的枯草芽孢杆菌PGA-7-224rapA菌种,接入发酵培养基中,在37℃摇床振荡培养18h,摇床转速200r/min,此为种子液。所述发酵培养基的成分:蔗糖90g/L,硫酸铵20g/L,磷酸氢二钾1g/L,七水硫酸镁0.06g/L,二水氯化钙0.15g/L,一水硫酸锰0.05g/L,六水氯化铁0.01g/L,余量为水,调pH为6.5;配制方法是将上述成分混合均匀后,调pH值,然后灭菌备用。Preparation of Bacillus subtilis PGA-7-224rapA seed solution: Take 2 rings of the above-mentioned activated Bacillus subtilis PGA-7-224rapA strain, insert it into the fermentation medium, shake and cultivate at 37°C for 18 hours, and the shaker speed is 200r /min, this is the seed solution. The composition of the fermentation medium: sucrose 90g/L, ammonium sulfate 20g/L, dipotassium hydrogen phosphate 1g/L, magnesium sulfate heptahydrate 0.06g/L, calcium chloride dihydrate 0.15g/L, manganese sulfate monohydrate 0.05g/L, ferric chloride hexahydrate 0.01g/L, the balance is water, and the pH is adjusted to 6.5; the preparation method is to mix the above ingredients evenly, adjust the pH value, and then sterilize for later use.

液体摇瓶发酵:发酵培养基分装50mL入300mL三角瓶,将枯草芽孢杆菌PGA-7-224rapA种子液按接种量为体积分数10%接入到发酵培养基中,发酵温度37℃,在摇床振荡培养96h,摇床转速200r/min。检测γ-聚谷氨酸的产量为25.24g/L。Liquid shake flask fermentation: 50mL of the fermentation medium was divided into 300mL Erlenmeyer flasks, and the seed solution of Bacillus subtilis PGA-7-224rapA was inserted into the fermentation medium according to the inoculation amount as 10% by volume fraction, and the fermentation temperature was 37°C. Bed shaking culture 96h, shaker speed 200r/min. The output of gamma-polyglutamic acid was detected to be 25.24g/L.

对比例1:Comparative example 1:

贝莱斯芽孢杆菌PGA-7.1菌种的活化和种子液的制备步骤与实施例2相同。The steps for the activation of the Bacillus Velez PGA-7.1 strain and the preparation of the seed solution are the same as in Example 2.

液体摇瓶发酵:发酵培养基(配方同实施例2的发酵培养基)分装50mL入300mL三角瓶,将发酵菌株贝莱斯芽孢杆菌PGA-7.1种子液按照接种量为体积分数10%接种到发酵培养基中,发酵温度37℃。在旋转式摇床振荡培养7d,摇床转速250r/min。发酵完毕,检测γ-聚谷氨酸的产量为2.647g/L。Liquid shake flask fermentation: fermentation medium (the fermentation medium of formula with embodiment 2) subpackage 50mL enters 300mL Erlenmeyer flask, the seed liquid of fermented strain Bacillus Velesi PGA-7.1 is inoculated into 10% by volume fraction according to the inoculum size In the fermentation medium, the fermentation temperature is 37°C. The culture was shaken on a rotary shaker for 7 days, and the speed of the shaker was 250r/min. After the fermentation was completed, the output of gamma-polyglutamic acid was detected to be 2.647g/L.

对比例2:Comparative example 2:

地衣芽孢杆菌ATCC No:9945a菌种的活化的制备步骤与实施例2相同。地衣芽孢杆菌ATCC No:9945a种子液的制备步骤与实施例5相同。The preparation steps for the activation of the Bacillus licheniformis ATCC No: 9945a strain are the same as in Example 2. The preparation steps of Bacillus licheniformis ATCC No: 9945a seed solution are the same as in Example 5.

液体摇瓶发酵:发酵培养基(配方同实施例5的发酵培养基)分装50mL入300mL三角瓶,将地衣芽孢杆菌ATCC No:9945a种子液按照接种量为体积分数10%接种到发酵培养基中,发酵温度37℃。在摇床振荡培养96h,摇床转速200r/min。发酵完毕,检测γ-聚谷氨酸的产量为29.54g/L。Liquid shake flask fermentation: 50mL of the fermentation medium (the same formulation as the fermentation medium of Example 5) is subpackaged into a 300mL Erlenmeyer flask, and the Bacillus licheniformis ATCC No: 9945a seed solution is inoculated into the fermentation medium according to the inoculum size of 10% by volume fraction Medium, the fermentation temperature is 37°C. The culture was shaken on a shaker for 96 hours, and the speed of the shaker was 200r/min. After the fermentation was completed, the output of gamma-polyglutamic acid was detected to be 29.54g/L.

对比例3:Comparative example 3:

枯草芽孢杆菌PGA-7菌种的活化的制备步骤与实施例2相同。枯草芽孢杆菌PGA-7种子液的制备步骤与实施例7相同。The preparation steps for the activation of the Bacillus subtilis PGA-7 strain are the same as in Example 2. The preparation steps of the Bacillus subtilis PGA-7 seed solution are the same as in Example 7.

液体摇瓶发酵:发酵培养基(配方同实施例7的发酵培养基)分装50mL入300mL三角瓶,将枯草芽孢杆菌的种子液按照接种量为体积分数10%接种到发酵培养基中,发酵温度37℃,在摇床振荡培养96h,摇床转速200r/min。发酵完毕,检测γ-聚谷氨酸的产量16.23g/L。SEQ ID NO.1(突变基因rapA的核苷酸序列)Liquid shake flask fermentation: fermentation medium (the fermentation medium of formula with embodiment 7) subpackage 50mL enters 300mL Erlenmeyer flask, the seed liquid of Bacillus subtilis is inoculated in the fermentation medium according to inoculum size as volume fraction 10%, fermentation The temperature was 37°C, and the culture was shaken on a shaker for 96 hours, and the speed of the shaker was 200r/min. After the fermentation, the output of gamma-polyglutamic acid was detected to be 16.23g/L. SEQ ID NO.1 (nucleotide sequence of mutant gene rapA)

ATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCACGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATTGAGGATATGGAAGAAGATCAGGATCTGCTGCTGTATTATTCATTAATGGAATTCAGACACCGCGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAGTTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCGAGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCGTTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATTTTTTACAACCTGAAACAAACCTACGTCTCCATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGTTATTGCAGGGAATTATGATGGCATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAACAAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAAATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCACGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATTGAGGATATGGAAGAAGATCAGGATCTGCTGCTGTATTATTCATTAATGGAATTCAGACACCGCGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGA CCCTTTCAGCCTGAGTTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCGAGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCGTTTCTGATGACATCGAGAAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATTT TTTACAACCTGAAACAAACCTACGTCTCCATGAGTTATGCCGTTCAAGCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGTTATTGCAGGGAATTATGATGGCATGCAGTATCCAAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAACAAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATAATACT CGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA

GCAGCCGAATATTTTGAGACAGCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTGCAGCCGAATATTTTGAGACAGCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTT

CCGCATTCTATTTACTCATTAACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCACCGCATTCTATTACTCATTAACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCA

GAGAAGCAATATCGCCTCGGGCTCAGTATCGCCCGCGAATACAATGATGAATTGTTTGTCGAGAAGCAATATCGCCTCGGGCTCAGTATCGCCCGCGAATACAATGATGAATTGTTTGTC

AATCTGTTCCAATTTTTGCATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGGAATCTGTTCCAATTTTTGCATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG

CGCACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATCGCACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCAT

GACGCTGCCAAATTTTACATGAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAGACGCTGCCAAATTTTACATGAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGA

AAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATTGTCTATATGAAATCTAA。AAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATTGTCTATATGAAATCTAA.

Claims (10)

1.一种提高γ-聚谷氨酸产量的突变基因rapA,其特征在于,其核苷酸序列如SEQ IDNO.1所示。1. A mutant gene rapA that improves the yield of γ-polyglutamic acid, characterized in that its nucleotide sequence is as shown in SEQ ID NO.1. 2.含权利要求1所述的突变基因rapA的菌株。2. the bacterial strain containing the mutant gene rapA described in claim 1. 3.贝莱斯芽孢杆菌PGA-224,其保藏号为GDMCCNo.62295。3. Bacillus Velez PGA-224, the preservation number of which is GDMCC No.62295. 4.一种提高γ-聚谷氨酸产量的方法,其特征在于,包括以下步骤:通过将权利要求1的突变基因rapA替换γ-聚谷氨酸生产菌种中的rapA基因。4. A method for increasing the yield of gamma-polyglutamic acid, comprising the following steps: replacing the rapA gene in the gamma-polyglutamic acid-producing strain with the mutant gene rapA of claim 1. 5.根据权利要求4所述的方法,其特征在于,所述的γ-聚谷氨酸生产菌是贝莱斯芽孢杆菌、枯草芽孢杆菌或地衣芽孢杆菌。5 . The method according to claim 4 , characterized in that, the γ-polyglutamic acid-producing bacteria are Bacillus Veles, Bacillus subtilis or Bacillus licheniformis. 6.根据权利要求5所述的方法,其特征在于,所述的地衣芽孢杆菌为地衣芽孢杆菌BacilluslicheniformisATCC9945a,其保藏编号:ATCCNo:9945a;所述的枯草芽孢杆菌为枯草芽孢杆菌(Bacillussubtilis)PGA-7,其保藏编号为:CCTCCNO:M206102。6. the method according to claim 5 is characterized in that, described Bacillus licheniformis is Bacillus licheniformisATCC9945a, and its deposit number: ATCCNo: 9945a; Described Bacillus subtilis is Bacillus subtilis (Bacillus subtilis) PGA- 7. Its deposit number is: CCTCCNO: M206102. 7.根据权利要求4所述的方法,其特征在于,包括以下步骤:7. The method according to claim 4, characterized in that, comprising the steps of: (1)合成γ-聚谷氨酸生产菌基因组中rapA基因的sgRNA序列;(1) Synthesizing the sgRNA sequence of the rapA gene in the genome of the γ-polyglutamic acid producing bacteria; (2)将sgRNA序列插入pJOE8999质粒得到pJOE8999-sgRNA;(2) Insert the sgRNA sequence into the pJOE8999 plasmid to obtain pJOE8999-sgRNA; (3)对pJOE8999-sgRNA进行酶切;(3) Digest pJOE8999-sgRNA; (4)扩增γ-聚谷氨酸生产菌的rapA基因的上下游同源序列;(4) amplifying the upstream and downstream homologous sequences of the rapA gene of the γ-polyglutamic acid producing bacteria; (5)扩增权利要求1所述的突变基因rapA序列;(5) amplifying the mutant gene rapA sequence described in claim 1; (6)将酶切的pJOE8999-sgRNA质粒、扩增得到γ-聚谷氨酸生产菌的rapA基因的上下游同源序列片段和突变基因rapA序列片段进行同源重组,得到pJOE8999-sgRNA-rapA224质粒;(6) Perform homologous recombination on the digested pJOE8999-sgRNA plasmid, the amplified upstream and downstream homologous sequence fragments of the rapA gene of the γ-polyglutamic acid producing bacteria, and the mutant gene rapA sequence fragments to obtain pJOE8999-sgRNA-rapA224 plasmid; (7)将pJOE8999-sgRNA-rapA224质粒转入γ-聚谷氨酸生产菌中,发酵培养生产γ-聚谷氨酸。(7) The pJOE8999-sgRNA-rapA224 plasmid was transformed into γ-polyglutamic acid producing bacteria, and fermented to produce γ-polyglutamic acid. 8.根据权利要求7所述的方法,其特征在于,具体步骤如下:8. The method according to claim 7, wherein the specific steps are as follows: (1)γ-聚谷氨酸生产菌基因组中rapA基因的前20个碱基的5’端前面加上tacg,互补序列的5’端前面加上aaac,从而得到sgRNA序列,合成sgRNA序列;(1) add tacg in front of the 5' end of the first 20 bases of the rapA gene in the gamma-polyglutamic acid producing bacteria genome, and add aaac in front of the 5' end of the complementary sequence, thereby obtaining the sgRNA sequence and synthesizing the sgRNA sequence; (2)用BsaI单酶切pJOE8999质粒,并割胶回收;酶切的质粒与sgRNA序列链接,得到pJOE8999-sgRNA;(2) Digest the pJOE8999 plasmid with BsaI, and recover it by tapping the rubber; link the digested plasmid with the sgRNA sequence to obtain pJOE8999-sgRNA; (3)对pJOE8999-sgRNA质粒进行SmaI和XbaI双酶切;(3) Carry out SmaI and XbaI double enzyme digestion to the pJOE8999-sgRNA plasmid; (4)以γ-聚谷氨酸生产菌的基因组DNA作为模板,使用PCR特异引物扩增得到rapA基因的上下游同源序列;(4) using the genomic DNA of the gamma-polyglutamic acid-producing bacteria as a template, using PCR-specific primers to amplify the upstream and downstream homologous sequences of the rapA gene; (5)以权利要求3所述的贝莱斯芽孢杆菌PGA-224的基因组DNA作为模板,使用PCR特异引物扩增得到突变基因rapA基因序列;(5) using the genomic DNA of the Bacillus bacillus PGA-224 according to claim 3 as a template, use PCR specific primer amplification to obtain the mutant gene rapA gene sequence; (6)将酶切的pJOE8999-sgRNA质粒、扩增得到γ-聚谷氨酸生产菌的rapA基因的上下游同源序列片段和扩增得到贝莱斯芽孢杆菌PGA-224的突变基因rapA序列片段进行同源重组,得到pJOE8999-sgRNA-rapA224质粒;(6) The digested pJOE8999-sgRNA plasmid, amplified to obtain the upstream and downstream homologous sequence fragments of the rapA gene of the gamma-polyglutamic acid-producing bacterium, and the amplified sequence of the mutant gene rapA of Bacillus Velez PGA-224 The fragment was subjected to homologous recombination to obtain the pJOE8999-sgRNA-rapA224 plasmid; (7)将pJOE8999-sgRNA-rapA224质粒转入γ-聚谷氨酸生产菌中,30℃,在含有20μg/mL卡那霉素和1.0g/L甘露糖的LB板上选择转化体;将平板上生长的阳性突变体转移到普通LB平板上,以在45℃下消除质粒;然后使用验证引物通过菌落PCR筛选阳性克隆;将阳性克隆进行发酵培养生产γ-聚谷氨酸。(7) Transform the pJOE8999-sgRNA-rapA224 plasmid into γ-polyglutamic acid producing bacteria, and select transformants on LB plates containing 20 μg/mL kanamycin and 1.0 g/L mannose at 30°C; The positive mutants grown on the plate were transferred to common LB plates to eliminate the plasmid at 45°C; then the positive clones were screened by colony PCR using the verified primers; the positive clones were fermented to produce γ-polyglutamic acid. 9.根据权利要求8所述的方法,其特征在于,所述的验证引物的序列为:rapA-y-F:ATGAAGCAGACTATTCCGTCCT和rapA-y-R:TAGACAATCTCCTCTCTGGATT。9 . The method according to claim 8 , wherein the sequences of the verification primers are: rapA-y-F: ATGAAGCAGACTATTCCGTCCT and rapA-y-R: TAGACAATCTCCCTCTCTGGATT. 10.权利要求1所述的突变基因rapA、权利要求3或4所述的菌株在提高γ-聚谷氨酸产量中的应用。10. The application of the mutated gene rapA as claimed in claim 1 and the bacterial strain as claimed in claim 3 or 4 in increasing the output of γ-polyglutamic acid.
CN202310126003.9A 2023-02-17 2023-02-17 Method for improving gamma-polyglutamic acid yield Pending CN116694658A (en)

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