CN114913943A - Clinical research data collection method and device, electronic device and storage medium - Google Patents
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Abstract
本申请公开了一种临床研究数据采集方法和装置、电子设备和存储介质,该方法包括:接收第一数据库的建库配置以配置第二数据库,其中,第二数据库的配置内容包括访视、表单、字段组、字段、字典、单位;将配置完的第二数据库与第一数据库建立对接关系,并向第一数据库发送第二数据库的建库配置;基于访视序号和表单序号,建立第一数据库和第二数据库之间的字段映射关系;基于字段映射关系,将第二数据库获取的临床研究数据发送至第一数据库。该临床研究数据采集方法可以实现EDC系统对临床研究数据的自动采集,在提高数据采集效率的同时降低数据录入成本。
The present application discloses a clinical research data collection method and device, electronic device and storage medium. The method includes: receiving a database construction configuration of a first database to configure a second database, wherein the configuration content of the second database includes visits, Form, field group, field, dictionary, unit; establish a docking relationship between the configured second database and the first database, and send the database construction configuration of the second database to the first database; A field mapping relationship between a database and a second database; based on the field mapping relationship, the clinical research data acquired by the second database is sent to the first database. The clinical research data acquisition method can realize the automatic acquisition of clinical research data by the EDC system, and reduce the data entry cost while improving the data acquisition efficiency.
Description
技术领域technical field
本申请属于数据库技术领域,具体涉及一种临床研究数据采集方法和装置、电子设备和存储介质。The present application belongs to the technical field of databases, and specifically relates to a clinical research data collection method and device, electronic equipment and storage medium.
背景技术Background technique
临床试验数据电子采集(Electric Data Capture,EDC)系统是适用于药物临床试验、医学随机对照试验和医学队列研究的核心信息化系统,其主要功能之一在于汇聚受试者的临床研究数据,并实现数据的存储、管理、递交等功能。目前市场上的EDC系统种类繁多,通常需要由临床协调员(Clinical Research Coordinator,CRC)手动在EDC系统中进行临床研究数据的录入,效率低下,无法做到实时,也容易出错,客户监察不方便。The Electric Data Capture (EDC) system for clinical trial data is a core information system suitable for drug clinical trials, medical randomized controlled trials and medical cohort studies. Realize data storage, management, delivery and other functions. There are many types of EDC systems currently on the market. Usually, clinical research coordinators (CRC) need to manually enter clinical research data in the EDC system, which is inefficient, cannot be real-time, and is prone to errors. It is inconvenient for customers to monitor. .
公开于该背景技术部分的信息仅仅旨在增加对本申请的总体背景的理解,而不应当被视为承认或以任何形式暗示该信息构成已为本领域一般技术人员所公知的现有技术。The information disclosed in this Background section is only for enhancement of understanding of the general background of the application and should not be taken as an acknowledgement or any form of suggestion that this information forms the prior art already known to a person of ordinary skill in the art.
发明内容SUMMARY OF THE INVENTION
本申请的目的在于提供一种临床研究数据采集方法,其用于解决EDC系统临床研究数据录入效率低下且容易出错的问题。The purpose of the present application is to provide a clinical research data collection method, which is used to solve the problems of low efficiency and error-prone data entry of clinical research data in the EDC system.
为实现上述目的,本申请提供了一种临床研究数据采集方法,所述方法包括:To achieve the above purpose, the present application provides a method for collecting clinical research data, the method comprising:
接收第一数据库的建库配置以配置第二数据库,其中,所述第二数据库的配置内容包括访视、表单、字段组、字段、字典、单位;receiving the database construction configuration of the first database to configure the second database, wherein the configuration content of the second database includes visits, forms, field groups, fields, dictionaries, and units;
将配置完的所述第二数据库与第一数据库建立对接关系,并向所述第一数据库发送所述第二数据库的建库配置;establishing a docking relationship between the configured second database and the first database, and sending the database building configuration of the second database to the first database;
基于访视序号和表单序号,建立所述第一数据库和第二数据库之间的字段映射关系;establishing a field mapping relationship between the first database and the second database based on the visit sequence number and the form sequence number;
基于所述字段映射关系,将所述第二数据库获取的临床研究数据发送至所述第一数据库。Based on the field mapping relationship, the clinical research data acquired by the second database is sent to the first database.
在本申请的一个或多个实施例中,将配置完的所述第二数据库与第一数据库建立对接关系,具体包括:In one or more embodiments of the present application, establishing a docking relationship between the configured second database and the first database specifically includes:
发送所述第二数据库的对接指令至中转平台,以供所述中转平台生成对接标识和秘钥,其中,所述第一数据库基于所述对接标识和秘钥与所述第二数据库建立对接关系。Send the docking instruction of the second database to the transit platform for the transit platform to generate a docking identifier and a secret key, wherein the first database establishes a docking relationship with the second database based on the docking identifier and the secret key .
在本申请的一个或多个实施例中,将配置完的所述第二数据库与第一数据库建立对接关系,具体包括:In one or more embodiments of the present application, establishing a docking relationship between the configured second database and the first database specifically includes:
根据所述第二数据库的对接指令生成对接标识和秘钥;generating a docking identifier and a secret key according to the docking instruction of the second database;
将所述对接标识和秘钥发送至所述第一数据库,以供所述第一数据库与第二数据库建立对接关系。Sending the docking identifier and the secret key to the first database, so that the first database can establish a docking relationship with the second database.
在本申请的一个或多个实施例中,基于访视序号和表单序号,建立所述第一数据库和第二数据库之间的字段映射关系,具体包括:In one or more embodiments of the present application, establishing a field mapping relationship between the first database and the second database based on the visit sequence number and the form sequence number, specifically includes:
基于访视序号和表单序号,确定所述第一数据库和第二数据库之间的字段映射顺序;Determine the field mapping order between the first database and the second database based on the visit sequence number and the form sequence number;
以字段的对象标识符为映射标识,并基于所述字段映射顺序,建立所述第一数据库和第二数据库之间的字段映射关系。Using the object identifier of the field as the mapping identifier, and based on the field mapping sequence, the field mapping relationship between the first database and the second database is established.
在本申请的一个或多个实施例中,接收第一数据库的建库配置以配置第二数据库,具体包括:In one or more embodiments of the present application, receiving the database construction configuration of the first database to configure the second database specifically includes:
基于所述第一数据库的建库配置以对所述第二数据库进行通用配置和专用配置,其中,所述通用配置包括试验类别和访视组别的创建、字典保存、表单定义保存和字段组字段增量保存、访视任务全量更新、以及访视流程全量更新或新增。General configuration and specific configuration of the second database based on the library configuration of the first database, wherein the general configuration includes creation of test categories and visit groups, dictionary storage, form definition storage, and field groups Incremental saving of fields, full update of visit tasks, and full update or addition of visit procedures.
在本申请的一个或多个实施例中,基于所述字段映射关系,将所述第二数据库获取的临床研究数据发送至所述第一数据库,具体包括:In one or more embodiments of the present application, based on the field mapping relationship, sending the clinical research data acquired by the second database to the first database specifically includes:
预处理所述第二数据库获取的临床研究数据为标准格式,其中,所述标准格式为所述第一数据库认可的数据格式;The clinical research data obtained by preprocessing the second database is in a standard format, wherein the standard format is a data format approved by the first database;
基于所述字段映射关系,将预处理后的所述临床研究数据发送至中转平台,其中,所述第一数据库从所述中转平台接收预处理后的所述临床研究数据。Based on the field mapping relationship, the preprocessed clinical research data is sent to a transfer platform, wherein the first database receives the preprocessed clinical research data from the transfer platform.
在本申请的一个或多个实施例中,所述第一数据库的建库配置为ODM文件格式。In one or more embodiments of the present application, the database construction configuration of the first database is an ODM file format.
本申请还提供一种临床研究数据采集装置,所述临床研究数据采集装置包括:The application also provides a clinical research data acquisition device, the clinical research data acquisition device includes:
配置模块,用于接收第一数据库的建库配置以配置第二数据库,其中,所述第二数据库的配置内容包括访视、表单、字段组、字段、字典、单位;a configuration module, configured to receive the database construction configuration of the first database to configure the second database, wherein the configuration content of the second database includes visits, forms, field groups, fields, dictionaries, and units;
对接模块,用于将配置完的所述第二数据库与第一数据库建立对接关系,并向所述第一数据库发送所述第二数据库的建库配置;a docking module, configured to establish a docking relationship between the configured second database and the first database, and send the database building configuration of the second database to the first database;
映射关系建立模块,用于基于访视序号和表单序号,建立所述第一数据库和第二数据库之间的字段映射关系;a mapping relationship establishing module for establishing a field mapping relationship between the first database and the second database based on the visit sequence number and the form sequence number;
数据发送模块,用于基于所述字段映射关系,将所述第二数据库获取的临床研究数据发送至所述第一数据库。A data sending module, configured to send the clinical research data obtained from the second database to the first database based on the field mapping relationship.
本申请还提供一种电子设备,包括:The application also provides an electronic device, comprising:
至少一个处理器;以及at least one processor; and
存储器,所述存储器存储指令,当所述指令被所述至少一个处理器执行时,使得所述至少一个处理器执行如上所述的临床研究数据采集方法。A memory that stores instructions that, when executed by the at least one processor, cause the at least one processor to perform the clinical study data acquisition method as described above.
本申请还提供一种机器可读存储介质,其存储有可执行指令,所述指令当被执行时使得所述机器执行如上所述的临床研究数据采集方法。The present application also provides a machine-readable storage medium storing executable instructions that, when executed, cause the machine to perform the clinical research data acquisition method as described above.
与现有技术相比,根据本申请的临床研究数据采集方法,通过基于第一数据库的建库配置对第二数据库进行访视、表单、字段组、字段、字典、单位的配置,并建立第一数据库和第二数据库的对接关系,第一数据库和第二数据库进而可以基于访视序号和表单序号建立字段映射关系,这样,第二数据库获取的临床研究数据可以发送至第一数据库,以实现EDC系统对临床研究数据的采集。Compared with the prior art, according to the clinical research data collection method of the present application, the configuration of visits, forms, field groups, fields, dictionaries, and units is performed on the second database through the database construction configuration based on the first database, and the configuration of the first database is established. The docking relationship between the first database and the second database, the first database and the second database can further establish a field mapping relationship based on the visit serial number and the form serial number, so that the clinical research data obtained by the second database can be sent to the first database to realize EDC system collection of clinical research data.
在另一个方面,第二数据库可以与院内、院外随访以及研究病历等数据进行对接,实时地将这些数据基于字段映射关系传输至第一数据库,提高EDC系统对临床研究数据采集的时效性,在提高数据采集效率的同时降低数据录入成本。On the other hand, the second database can be connected with data such as in-hospital and out-of-hospital follow-up and research medical records, and transfer these data to the first database in real time based on the field mapping relationship, improving the timeliness of the EDC system for clinical research data collection. Improve data collection efficiency while reducing data entry costs.
附图说明Description of drawings
图1是根据本申请一实施例临床研究数据采集方法和装置的应用场景示意图;1 is a schematic diagram of an application scenario of a method and apparatus for collecting clinical research data according to an embodiment of the present application;
图2是根据本申请一实施例临床研究数据采集方法的流程图;2 is a flowchart of a clinical research data collection method according to an embodiment of the present application;
图3是根据本申请一实施例临床研究数据采集方法的交互图;3 is an interaction diagram of a clinical research data collection method according to an embodiment of the present application;
图4是根据本申请一实施例临床研究数据采集方法中,第一数据库和第二数据库的字段映射顺序图;4 is a sequence diagram of field mapping of a first database and a second database in a clinical research data collection method according to an embodiment of the present application;
图5是根据本申请一实施例临床研究数据采集装置的模块图;5 is a block diagram of a clinical research data acquisition device according to an embodiment of the present application;
图6是根据本申请一实施方式电子设备的硬件结构图。FIG. 6 is a hardware structure diagram of an electronic device according to an embodiment of the present application.
具体实施方式Detailed ways
以下将结合附图所示的各实施方式对本申请进行详细描述。但该等实施方式并不限制本申请,本领域的普通技术人员根据该等实施方式所做出的结构、方法、或功能上的变换均包含在本申请的保护范围内。The present application will be described in detail below with reference to the various embodiments shown in the accompanying drawings. However, these embodiments do not limit the present application, and structural, method, or functional transformations made by those of ordinary skill in the art based on these embodiments are all included in the protection scope of the present application.
本申请的说明书和权利要求书及上述附图中的术语“第一”、“第二”、“第三”、“第四”等(如果存在)是用于区别类似的对象,而不必用于描述特定的顺序或先后次序。应该理解这样使用的数据在适当情况下可以互换,以便这里描述的本申请的实施例例如能够以除了在这里图示或描述的那些以外的顺序实施。此外,术语“包括”和“对应于”以及他们的任何变形,意图在于覆盖不排他的包含,例如,包含了一系列步骤或单元的过程、方法、系统、产品或设备不必限于清楚地列出的那些步骤或单元,而是可包括没有清楚地列出的或对于这些过程、方法、产品或设备固有的其它步骤或单元。The terms "first", "second", "third", "fourth", etc. (if any) in the description and claims of this application and the above-mentioned drawings are used to distinguish similar objects and are not necessarily used to describe a specific order or sequence. It is to be understood that the data so used may be interchanged under appropriate circumstances such that the embodiments of the application described herein can, for example, be practiced in sequences other than those illustrated or described herein. Furthermore, the terms "comprising" and "corresponding to", and any variations thereof, are intended to cover non-exclusive inclusion, eg, a process, method, system, product or device comprising a series of steps or units not necessarily limited to those expressly listed but may include other steps or units not expressly listed or inherent to these processes, methods, products or devices.
药物的临床试验指的是在人体进行的药物系统性研究,以确定药物的疗效和安全性。药物临床试验阶段分为I期、II期、III期临床试验、IV期临床试验。I期主要是涉及初步的临床药理学及人体安全性评价试验。II期可以理解为治疗作用初步评价阶段,主要涉及初步评价药物对目标适应症患者的治疗作用和安全性,也包括为III期临床试验研究设计和给药剂量方案的确定提供依据。III期可以理解为治疗作用确证阶段,主要进一步验证药物对目标适应症患者的治疗作用和安全性,评价利益与风险关系,最终为药物注册申请的审查提供充分的依据。IV期主要是药物上市后的临床试验,在药物上市后,可以继续追踪在广泛使用条件下的药物的疗效和不良反应,以评价在普通或者特殊人群中使用的利益与风险关系以及改进给药剂量等。A clinical trial of a drug refers to the systematic study of a drug in humans to determine the efficacy and safety of the drug. Drug clinical trials are divided into Phase I, Phase II, Phase III clinical trials, and Phase IV clinical trials. Phase I mainly involves preliminary clinical pharmacology and human safety evaluation trials. Phase II can be understood as the preliminary evaluation of the therapeutic effect, which mainly involves the preliminary evaluation of the therapeutic effect and safety of the drug on the patients with the target indication, and also includes the provision of the basis for the design of the Phase III clinical trial and the determination of the dosing schedule. Phase III can be understood as the confirmation stage of the therapeutic effect, which mainly further verifies the therapeutic effect and safety of the drug on the patients with the target indication, evaluates the relationship between benefits and risks, and finally provides a sufficient basis for the review of the drug registration application. Phase IV is mainly a clinical trial after the drug is marketed. After the drug is launched, the efficacy and adverse reactions of the drug under widely used conditions can continue to be tracked to evaluate the relationship between benefits and risks in general or special populations and improve drug delivery. dose, etc.
在临床试验过程中,会产生大量的临床研究数据,包括院内、院外随访以及研究病历等数据。以院内数据为例,可以包括实验室信息管理系统(Laboratory InformationManagement System,LIS)、医院信息系统(Hospital Information System,HIS)、医学影像存档与通讯系统(Picture archiving and communication systems,PACS)、放射信息管理系统(Radioiogy information system,RIS)等系统数据。In the course of clinical trials, a large amount of clinical research data will be generated, including in-hospital and out-of-hospital follow-up and research medical records. Taking in-hospital data as an example, it can include Laboratory Information Management System (LIS), Hospital Information System (HIS), Picture archiving and communication systems (PACS), radiology information Management system (Radioiogy information system, RIS) and other system data.
参图1,在本申请的一个应用场景中,可以针对这些临床研究数据提供一个统一的数据管理系统,该数据管理系统可以与不同的EDC系统进行对接,并将临床研究数据自动地发送至EDC系统中,以实现EDC系统对这些临床研究数据的采集。其中,临床研究数据可以是被该数据管理软件实时或按照指定的周期进行抓取,又或者,临床研究数据可以是按照需求被转移存储至数据管理系统配置的存储空间。Referring to Figure 1, in an application scenario of the present application, a unified data management system can be provided for these clinical research data, the data management system can be connected with different EDC systems, and the clinical research data can be automatically sent to the EDC. In the system, to realize the collection of these clinical research data by the EDC system. The clinical research data may be captured by the data management software in real time or according to a specified period, or the clinical research data may be transferred and stored to the storage space configured by the data management system as required.
参图2,介绍本申请临床研究数据采集方法的一实施例。在本实施例中,该方法包括:Referring to FIG. 2, an embodiment of the clinical research data collection method of the present application is introduced. In this embodiment, the method includes:
S11、接收第一数据库的建库配置以配置第二数据库。S11. Receive the database construction configuration of the first database to configure the second database.
配合参图3,第一数据库可以对应于EDC系统,EDC系统在完成第一数据库的建库后,可以将建库配置以设定的格式导出。With reference to FIG. 3 , the first database may correspond to the EDC system, and after the EDC system completes the database building of the first database, the database building configuration may be exported in a set format.
一实施例中,这里导出的第一数据库的建库配置为操作数据模型(OperationalData Model,ODM)文件格式。ODM是CDISC(The Clinical Data InterchangeStandardsConsortium,临床数据交换标准协会)公布的标准之一。临床试验数据的规范化和标准化可推动和提高实际工作的效率和可靠性,因此,若干生物技术和药物开发公司组建了CDISC。ODM是基于XML,用于获取、交换、报告或递交,以及对基于病例报告表(CRF)的临床研究数据归档的内容和格式标准。In an embodiment, the database building configuration of the first database exported here is in an Operational Data Model (Operational Data Model, ODM) file format. ODM is one of the standards published by CDISC (The Clinical Data Interchange Standards Consortium). The normalization and standardization of clinical trial data drives and improves the efficiency and reliability of practical work, and as a result, several biotechnology and drug development companies have formed CDISC. ODM is an XML-based, content and format standard for capturing, exchanging, reporting or submitting, and filing Case Report Form (CRF)-based clinical research data.
第二数据库可以对应于数据管理系统,数据管理系统可以导入上述第一数据库的建库配置以进行第二数据库的配置。对于临床研究数据而言,这里第一数据库和第二数据库的配置内容可以都包括访视、表单、字段组、字段、字典、单位等。The second database may correspond to a data management system, and the data management system may import the database construction configuration of the first database to configure the second database. For clinical research data, the configuration contents of the first database and the second database may include visits, forms, field groups, fields, dictionaries, units, and the like.
以一个临床试验项目(Study)为例,会涉及多个受试者(Subject),每个受试者都会有多个访视周期(Event),每个访视周期下会产生多个表单(Form)的数据,每个表单下可能会有一个或多个字段组(ItemGroup),每个字段组下对应到具体的字段(Item);对于每个字段而言,其可以有对应的说明信息,说明信息可以包括在EDC系统界面上展示的名称、数据类型、字段的含义、字段对应的业务规则以及字段在导出表中的呈现方式等,例如,可以从药物警戒专业书籍、药物警戒工作的标准作业程序(Standard Operating Procedure,SOP)文件等资料中提取字段以及对应的解释信息,这样的信息被称为字典。而上述的这些内容组合起来可以成为一条完整的临床研究数据(Clinical Data)。Taking a clinical trial project (Study) as an example, it will involve multiple subjects (Subject), each subject will have multiple visit periods (Event), and multiple forms will be generated under each visit period ( Form) data, each form may have one or more field groups (ItemGroup), and each field group corresponds to a specific field (Item); for each field, it can have corresponding description information , the description information can include the name displayed on the EDC system interface, the data type, the meaning of the field, the business rule corresponding to the field, and the presentation method of the field in the export table. Fields and corresponding interpretation information are extracted from standard operating procedure (Standard Operating Procedure, SOP) documents and other materials, and such information is called a dictionary. The above content can be combined into a complete clinical research data (Clinical Data).
可以看出,通过对访视、表单、字段组、字段、字典、单位等的配置,可以构建数据库对临床研究数据的承载基础。It can be seen that through the configuration of visits, forms, field groups, fields, dictionaries, units, etc., the database can build the basis for carrying clinical research data.
在具体的配置过程中,可以基于第一数据库的建库配置以对第二数据库进行通用配置和专用配置。In a specific configuration process, a general configuration and a dedicated configuration may be performed on the second database based on the database building configuration of the first database.
通用配置包括试验类别和访视组别的创建、字典保存、表单定义保存和字段组字段增量保存、访视任务全量更新、以及访视流程全量更新或新增。其中,对于不同的配置内容可能会存在相同的配置字段,故在进行字段组字段的配置时,并不执行全量的更新,而只在对应配置内容中进行增量保存。Common configuration includes creation of test categories and visit groups, dictionary saving, form definition saving and field group field incremental saving, full update of visit tasks, and full update or addition of visit procedures. Among them, the same configuration fields may exist for different configuration contents, so when configuring the field group fields, full updates are not performed, but only incremental saving is performed in the corresponding configuration contents.
例如,在试验类别和访视组别的创建中,可以包括对第一数据库的建库配置中单位的导入。具体的单位导入的元素对应关系如表I。For example, in the creation of trial categories and visit groups, the import of units in the library configuration of the first database may be included. The corresponding relationship of the elements imported by the specific unit is shown in Table I.
表ITable I
字典保存中字典导入的元素对应关系如表II。The corresponding relationship between the elements imported by the dictionary in the dictionary storage is shown in Table II.
表IITable II
表单定义保存和字段组字段增量保存包括表单定义导入、字段组关键字导入、字段组定义导入、字段关键字导入、字段定义导入、以及数据类型导入。Form definition saving and field group field incremental saving include form definition import, field group keyword import, field group definition import, field keyword import, field definition import, and data type import.
表III:表单定义导入的元素对应关系。Table III: Form Definition Imported Element Correspondence.
表IV:字段组关键字导入的元素对应关系。Table IV: Element correspondences imported by field group keywords.
表V:字段关键字导入的元素对应关系。Table V: Element correspondences imported by field keywords.
表VI:字段关键字导入的元素对应关系。Table VI: Element correspondences imported by field keywords.
表VII:字段定义导入的元素对应关系。Table VII: Field Definition Imported Element Correspondence.
表VIII:数据类型导入的元素对应关系。Table VIII: Element correspondence for data type import.
表IX:访视任务导入的元素对应关系。Table IX: Element correspondences imported by the visit task.
可以看出,以上的通用配置可以是基于第一数据库的建库配置的一部分。在对第二数据库进行通用配置后,还可以基于第一数据库的建库配置的剩余部分,对第二数据库进行专用配置。It can be seen that the above general configuration may be a part of the database construction configuration based on the first database. After the general configuration of the second database is performed, a dedicated configuration of the second database may also be performed based on the remaining part of the database building configuration of the first database.
S12、将配置完的所述第二数据库与第一数据库建立对接关系,并向所述第一数据库发送所述第二数据库的建库配置。S12. Establish a docking relationship between the configured second database and the first database, and send the database building configuration of the second database to the first database.
在一实施例中,第二数据库可以是通过一个中转平台与第一数据库建立对接关系。In one embodiment, the second database may establish a docking relationship with the first database through a transfer platform.
具体地,可以发送第二数据库的对接指令至该中转平台,中转平台可以根据接收到的对接指令生成对接标识和秘钥。对接标识用于供第一数据库“识别”与其对接的对象,而秘钥可以保证只有被允许的数据库与第二数据库建立对接关系。中转平台将对接标识和秘钥发送至第一数据库后,第一数据库基于该对接标识和秘钥与第二数据库建立对接关系。Specifically, a docking instruction of the second database may be sent to the transit platform, and the transit platform may generate a docking identifier and a secret key according to the received docking instruction. The docking identifier is used for the first database to "identify" the object docked with it, and the secret key can ensure that only the permitted database establishes a docking relationship with the second database. After the transit platform sends the docking identifier and the secret key to the first database, the first database establishes a docking relationship with the second database based on the docking identifier and the secret key.
在这样的实施例中,通过一个中转平台作为两个系统数据库之间的对接媒介,且该中转平台可以适配于多种不同系统之间的对接,使得软件产品的开发模块化且适应不同场景。In such an embodiment, a transfer platform is used as a docking medium between the two system databases, and the transfer platform can be adapted to the docking between a variety of different systems, so that the development of software products is modularized and adaptable to different scenarios .
在一实施例中,第二数据库也可以是不通过中转平台而直接与第一数据库建立对接关系。In one embodiment, the second database may also directly establish a docking relationship with the first database without going through a transfer platform.
在这样的实施例中,相当于将上一实施例中的中转平台的功能集成在第二数据库对应的系统(例如数据管理系统)中。也即,可以根据第二数据库的对接指令直接生成对接标识和秘钥,并将该对接标识和秘钥发送至第一数据库,以供第一数据库与第二数据库建立对接关系。In such an embodiment, it is equivalent to integrating the functions of the transfer platform in the previous embodiment into a system corresponding to the second database (for example, a data management system). That is, the docking identifier and the secret key can be directly generated according to the docking instruction of the second database, and the docking identifier and the secret key can be sent to the first database for establishing a docking relationship between the first database and the second database.
在建立对接关系时,还会向第一数据库发送第二数据库的建库配置。第二数据库的建库配置基于上述的访视、表单、字段组、字段、字典、单位等建库内容形成。由于在本申请的应用场景中,是基于第二数据库对应的数据管理系统进行临床研究数据的获取,这些临床研究数据会先被处理成第二数据库可承载的存储结构,通过将第二数据库的配置回传给第一数据库,可以使第一数据库获得对第二数据库传输的临床研究数据的识别能力。When establishing the docking relationship, the database building configuration of the second database is also sent to the first database. The database construction configuration of the second database is formed based on the above-mentioned database construction contents such as visits, forms, field groups, fields, dictionaries, and units. In the application scenario of the present application, the acquisition of clinical research data is performed based on the data management system corresponding to the second database, and these clinical research data will first be processed into a storage structure that can be carried by the second database. The configuration is transmitted back to the first database, so that the first database can obtain the ability to identify the clinical research data transmitted by the second database.
S13、基于访视序号和表单序号,建立所述第一数据库和第二数据库之间的字段映射关系。S13. Based on the visit serial number and the form serial number, establish a field mapping relationship between the first database and the second database.
在临床试验中,会设计临床试验方案(Protocol)描述试验的目的、设汁、方法学、统计学和组织实施等内容。临床试验方案详细描述了应当如何实施一项临床试验,如应入组某种类型的患者(入组/排除标准)、试验的设计和目的、如何服用试验用药品、怎样进行数据分析以及如何处理不良反应等。以下的表X示范了临床实验方案中一种常见的研究流程图。In a clinical trial, a clinical trial protocol (Protocol) will be designed to describe the purpose, design, methodology, statistics and organizational implementation of the trial. A clinical trial protocol describes in detail how a clinical trial should be conducted, such as which type of patients should be enrolled (enrollment/exclusion criteria), the design and purpose of the trial, how the investigational drug should be administered, how the data should be analyzed, and how it should be handled adverse reactions, etc. Table X below illustrates a common study flow diagram in a clinical trial protocol.
表X。Table X.
表X中包括了基线、访视日期(1周、2周、4周、8周)以及最终步骤等周期访视信息,每次访视下会对应有对应的访视任务,例如人口统计/医疗史、伴随治疗、血常规、皮损计数、总体改进、不良事件以及生活质量等。对于每次访视下的访视任务,都会有对应的表单以记录相关的具体检查项等。Table X includes baseline, visit dates (1 week, 2 weeks, 4 weeks, 8 weeks), and final steps and other periodic visit information. There will be corresponding visit tasks under each visit, such as demographics/ Medical history, concomitant therapy, blood count, skin lesion count, overall improvement, adverse events, and quality of life. For the visit tasks under each visit, there will be a corresponding form to record the relevant specific inspection items, etc.
示范性地,访视序号可以是依照这里周期访视的信息确定,例如,按照基线-1周-2周-4周-8周-最终步骤的先后顺序,确定各访视对应的序号。对应地,表单序号可以是依照每次访视下的访视任务确定,例如,按照人口统计/医疗史-伴随治疗-血常规-皮损计数-总体改进-不良事件以-生活质量的先后顺序,确定各访视任务对应的表单序号。Exemplarily, the visit sequence number can be determined according to the information of the periodic visit here, for example, in the order of baseline-1 week-2 weeks-4 weeks-8 weeks-final steps, the sequence number corresponding to each visit is determined. Correspondingly, the form number can be determined according to the visit task under each visit, for example, according to the order of demographics/medical history-concomitant treatment-blood routine-skin lesion count-overall improvement-adverse events-quality of life , and determine the serial number of the form corresponding to each visit task.
当然,在本申请的实施例中,访视序号和表单序号的确定可以是不以上述示范的研究流程图的信息而确定。也即,访视序号和表单序号可以是按照各自预设的规则而确定,而不需要具有“根据研究流程图的信息再确定相应序号”的步骤。Of course, in the embodiment of the present application, the determination of the visit sequence number and the form sequence number may not be determined based on the information of the above exemplary research flow chart. That is, the visit serial number and the form serial number can be determined according to their respective preset rules, and there is no need to have the step of "re-determining the corresponding serial number according to the information in the research flow chart".
基于访视序号和表单序号,可以确定第一数据库和第二数据之间的字段映射顺序。例如,对于血常规对应的字段而言,其可能出现在多张表单中(不同时间点),而表单又可能出现在多个访视下,通过访视序号和表单序号的二维顺序定位,可以为多个血常规对应的字段进行排序,以此类推,可以确定第一数据库和第二数据之间所有字段的映射顺序。Based on the visit sequence number and the form sequence number, the field mapping order between the first database and the second data can be determined. For example, for the field corresponding to the blood routine, it may appear in multiple forms (different time points), and the form may appear under multiple visits. Fields corresponding to multiple blood routines can be sorted, and by analogy, the mapping order of all fields between the first database and the second data can be determined.
配合参图4,例如依照上述的示范确定了访视1至访视m、以及表单1至表单n。则访视1-表单1确定第一个映射的血常规字段:字段映射1,访视1-表单2确定第二个映射的血常规字段:字段映射2,以此类推,直至第m*n个映射的血常规字段:字段映射m*n。In conjunction with FIG. 4 , visits 1 to m, and forms 1 to n are determined, for example, in accordance with the above-described demonstration. Then visit 1-
一实施例中,在第一数据库和第二数据库之间的映射关系建立中,可以选择字段的对象标识符(Object Identifier,OID)为映射标识,并基于确定的字段映射顺序建立。In an embodiment, in the establishment of the mapping relationship between the first database and the second database, an object identifier (OID) of a field may be selected as a mapping identifier, and established based on a determined field mapping sequence.
S14、基于所述字段映射关系,将所述第二数据库获取的临床研究数据发送至所述第一数据库。S14. Based on the field mapping relationship, send the clinical research data obtained from the second database to the first database.
对于数据管理系统而言,第二数据库获取的临床研究数据可能来自院内、院外随访和研究病历等多种途径,这些数据的格式可能并不被采集方(例如EDC系统)的第一数据库所认可。以时间信息为例,数据管理系统获取的原始时间数据可能为“日期:2020年12月25日,时间:17点52分”,而对应到EDC系统中,时间信息是以时间戳的形式进行保存。因此,数据管理系统会先将第二数据库获取的临床研究数据进行预处理,以转换成数据采集方的第一数据库认可的数据格式,也即标准格式。For the data management system, the clinical research data obtained by the second database may come from various sources such as in-hospital, out-of-hospital follow-up and research medical records, and the format of these data may not be recognized by the first database of the collecting party (such as the EDC system). . Taking time information as an example, the original time data obtained by the data management system may be "Date: December 25, 2020, Time: 17:52", while corresponding to the EDC system, the time information is in the form of timestamps. save. Therefore, the data management system will first preprocess the clinical research data obtained from the second database to convert it into a data format recognized by the first database of the data collector, that is, a standard format.
一实施例中,可以基于字段映射关系,将预处理后的临床研究数据发送至中转平台,中转平台可以对数据执行预览等操作,随后通过中转平台将临床研究数据间接发送至第一数据库。In one embodiment, the preprocessed clinical research data can be sent to the transfer platform based on the field mapping relationship, and the transfer platform can perform operations such as previewing the data, and then indirectly send the clinical research data to the first database through the transfer platform.
当然,在替换的实施例中,数据管理系统也可以是将第二数据库获取的临床研究数据预处理后,直接发送至第一数据库,而不必经过中转平台的转发。Of course, in an alternative embodiment, the data management system may also directly send the clinical research data obtained from the second database to the first database after preprocessing, without being forwarded by the transfer platform.
参图5,介绍本申请临床研究数据采集装置的一实施例。在本实施例中,该临床研究数据采集装置包括配置模块21、对接模块22、映射关系建立模块23以及数据发送模块24。Referring to FIG. 5, an embodiment of the clinical research data acquisition device of the present application is introduced. In this embodiment, the clinical research data collection device includes a
配置模块21用于接收第一数据库的建库配置以配置第二数据库,其中,第二数据库的配置内容包括访视、表单、字段组、字段、字典、单位;对接模块22用于将配置完的第二数据库与第一数据库建立对接关系,并向第一数据库发送第二数据库的建库配置;映射关系建立模块23用于基于访视序号和表单序号,建立第一数据库和第二数据库之间的字段映射关系;数据发送模块24用于基于字段映射关系,将第二数据库获取的临床研究数据发送至第一数据库。The
一实施例中,对接模块22具体用于发送第二数据库的对接指令至中转平台,以供中转平台生成对接标识和秘钥,其中,第一数据库基于对接标识和秘钥与第二数据库建立对接关系。In one embodiment, the
一实施例中,对接模块22具体用于根据第二数据库的对接指令生成对接标识和秘钥;以及将对接标识和秘钥发送至第一数据库,以供第一数据库与第二数据库建立对接关系。In one embodiment, the
一实施例中,映射关系建立模块23具体用于基于访视序号和表单序号,确定第一数据库和第二数据库之间的字段映射顺序;以及以字段的对象标识符为映射标识,并基于字段映射顺序,建立第一数据库和第二数据库之间的字段映射关系。In one embodiment, the mapping
一实施例中,配置模块21具体用于基于第一数据库的建库配置以对第二数据库进行通用配置和专用配置,其中,通用配置包括试验类别和访视组别的创建、字典保存、表单定义保存和字段组字段增量保存、访视任务全量更新、以及访视流程全量更新或新增。In one embodiment, the
一实施例中,数据发送模块24具体用于预处理第二数据库获取的临床研究数据为标准格式,其中,标准格式为第一数据库认可的数据格式;以及基于字段映射关系,将预处理后的临床研究数据发送至中转平台,其中,第一数据库从中转平台接收预处理后的临床研究数据。In one embodiment, the
一实施例中,配置模块21具体用于接收第一数据库ODM文件格式的建库配置以配置第二数据库。In one embodiment, the
如上参照图1到图4,对根据本说明书实施例临床研究数据采集方法进行了描述。在以上对方法实施例的描述中所提及的细节,同样适用于本说明书实施例的临床研究数据采集装置。上面的临床研究数据采集装置可以采用硬件实现,也可以采用软件或者硬件和软件的组合来实现。As above, with reference to FIGS. 1 to 4 , the clinical research data collection method according to the embodiment of the present specification is described. The details mentioned in the above description of the method embodiments are also applicable to the clinical research data acquisition device of the embodiments of the present specification. The above clinical research data acquisition device may be implemented by hardware, or may be implemented by software or a combination of hardware and software.
图6示出了根据本说明书的实施例的电子设备的硬件结构图。如图6所示,电子设备30可以包括至少一个处理器31、存储器32(例如非易失性存储器)、内存33和通信接口34,并且至少一个处理器31、存储器32、内存33和通信接口34经由总线35连接在一起。至少一个处理器31执行在存储器32中存储或编码的至少一个计算机可读指令。FIG. 6 shows a hardware structure diagram of an electronic device according to an embodiment of the present specification. As shown in FIG. 6, the electronic device 30 may include at least one processor 31, memory 32 (eg, non-volatile memory), memory 33, and communication interface 34, and at least one processor 31, memory 32, memory 33, and communication interface 34 are connected together via a bus 35 . At least one processor 31 executes at least one computer readable instruction stored or encoded in memory 32 .
应该理解,在存储器32中存储的计算机可执行指令当执行时使得至少一个处理器31进行本说明书的各个实施例中以上结合图1-图4描述的各种操作和功能。It should be understood that the computer-executable instructions stored in memory 32, when executed, cause at least one processor 31 to perform various operations and functions described above in connection with FIGS. 1-4 in various embodiments of this specification.
在本说明书的实施例中,电子设备30可以包括但不限于:个人计算机、服务器计算机、工作站、桌面型计算机、膝上型计算机、笔记本计算机、移动电子设备、智能电话、平板计算机、蜂窝电话、个人数字助理(PDA)、手持装置、消息收发设备、可佩戴电子设备、消费电子设备等等。In the embodiments of this specification, the electronic device 30 may include, but is not limited to, a personal computer, a server computer, a workstation, a desktop computer, a laptop computer, a notebook computer, a mobile electronic device, a smart phone, a tablet computer, a cellular phone, Personal Digital Assistants (PDAs), handheld devices, messaging devices, wearable electronics, consumer electronics, and the like.
根据一个实施例,提供了一种比如机器可读介质的程序产品。机器可读介质可以具有指令(即,上述以软件形式实现的元素),该指令当被机器执行时,使得机器执行本说明书的各个实施例中以上结合图1-图5描述的各种操作和功能。具体地,可以提供配有可读存储介质的系统或者装置,在该可读存储介质上存储着实现上述实施例中任一实施例的功能的软件程序代码,且使该系统或者装置的计算机或处理器读出并执行存储在该可读存储介质中的指令。According to one embodiment, a program product such as a machine-readable medium is provided. A machine-readable medium may have instructions (ie, the above-described elements implemented in software) that, when executed by a machine, cause the machine to perform the various operations and operations described above in connection with FIGS. 1-5 in various embodiments of this specification. Function. Specifically, a system or an apparatus equipped with a readable storage medium may be provided, on which software program codes for realizing the functions of any of the above-described embodiments are stored, and a computer or a computer of the system or apparatus may be provided. The processor reads and executes the instructions stored in the readable storage medium.
在这种情况下,从可读介质读取的程序代码本身可实现上述实施例中任何一项实施例的功能,因此机器可读代码和存储机器可读代码的可读存储介质构成了本说明书的一部分。In this case, the program code itself read from the readable medium can realize the functions of any one of the above-described embodiments, and thus the machine-readable code and the readable storage medium storing the machine-readable code constitute the present specification a part of.
可读存储介质的实施例包括软盘、硬盘、磁光盘、光盘(如CD-ROM、CD-R、CD-RW、DVD-ROM、DVD-RAM、DVD-RW、DVD-RW)、磁带、非易失性存储卡和ROM。可选择地,可以由通信网络从服务器计算机上或云上下载程序代码。Examples of readable storage media include floppy disks, hard disks, magneto-optical disks, optical disks (eg, CD-ROM, CD-R, CD-RW, DVD-ROM, DVD-RAM, DVD-RW, DVD-RW), magnetic tape, non- Volatile memory cards and ROMs. Alternatively, the program code may be downloaded from a server computer or the cloud over a communications network.
本领域技术人员应当理解,上面公开的各个实施例可以在不偏离发明实质的情况下做出各种变形和修改。因此,本说明书的保护范围应当由所附的权利要求书来限定。It should be understood by those skilled in the art that various variations and modifications may be made to the various embodiments disclosed above without departing from the spirit of the invention. Accordingly, the scope of protection of this specification should be defined by the appended claims.
需要说明的是,上述各流程和各系统结构图中不是所有的步骤和单元都是必须的,可以根据实际的需要忽略某些步骤或单元。各步骤的执行顺序不是固定的,可以根据需要进行确定。上述各实施例中描述的装置结构可以是物理结构,也可以是逻辑结构,即,有些单元可能由同一物理客户实现,或者,有些单元可能分由多个物理客户实现,或者,可以由多个独立设备中的某些部件共同实现。It should be noted that not all steps and units in the above-mentioned processes and system structure diagrams are necessary, and some steps or units may be omitted according to actual needs. The execution order of each step is not fixed and can be determined as required. The device structure described in the above embodiments may be a physical structure or a logical structure, that is, some units may be implemented by the same physical client, or some units may be implemented by multiple physical clients, or may be implemented by multiple physical clients. Some components in separate devices are implemented together.
以上各实施例中,硬件单元或模块可以通过机械方式或电气方式实现。例如,一个硬件单元、模块或处理器可以包括永久性专用的电路或逻辑(如专门的处理器,FPGA或ASIC)来完成相应操作。硬件单元或处理器还可以包括可编程逻辑或电路(如通用处理器或其它可编程处理器),可以由软件进行临时的设置以完成相应操作。具体的实现方式(机械方式、或专用的永久性电路、或者临时设置的电路)可以基于成本和时间上的考虑来确定。In the above embodiments, the hardware units or modules may be implemented mechanically or electrically. For example, a hardware unit, module or processor may include permanent dedicated circuits or logic (eg, dedicated processors, FPGAs or ASICs) to perform corresponding operations. The hardware unit or processor may also include programmable logic or circuits (such as a general-purpose processor or other programmable processors), which may be temporarily set by software to complete corresponding operations. The specific implementation (mechanical, or dedicated permanent circuit, or temporarily provided circuit) can be determined based on cost and time considerations.
上面结合附图阐述的具体实施方式描述了示例性实施例,但并不表示可以实现的或者落入权利要求书的保护范围的所有实施例。在整个本说明书中使用的术语“示例性”意味着“用作示例、实例或例示”,并不意味着比其它实施例“优选”或“具有优势”。出于提供对所描述技术的理解的目的,具体实施方式包括具体细节。然而,可以在没有这些具体细节的情况下实施这些技术。在一些实例中,为了避免对所描述的实施例的概念造成难以理解,公知的结构和装置以框图形式示出。The detailed description set forth above in connection with the accompanying drawings describes exemplary embodiments and does not represent all embodiments that may be implemented or fall within the scope of the claims. The term "exemplary" as used throughout this specification means "serving as an example, instance, or illustration" and does not mean "preferred" or "advantage" over other embodiments. The detailed description includes specific details for the purpose of providing an understanding of the described technology. However, these techniques may be practiced without these specific details. In some instances, well-known structures and devices are shown in block diagram form in order to avoid obscuring the concepts of the described embodiments.
本公开内容的上述描述被提供来使得本领域任何普通技术人员能够实现或者使用本公开内容。对于本领域普通技术人员来说,对本公开内容进行的各种修改是显而易见的,并且,也可以在不脱离本公开内容的保护范围的情况下,将本文所对应的一般性原理应用于其它变型。因此,本公开内容并不限于本文所描述的示例和设计,而是与符合本文公开的原理和新颖性特征的最广范围相一致。The above description of the present disclosure is provided to enable any person of ordinary skill in the art to make or use the present disclosure. Various modifications to the present disclosure will be readily apparent to those of ordinary skill in the art, and the general principles corresponding herein may also be applied to other modifications without departing from the scope of the present disclosure. . Thus, the present disclosure is not intended to be limited to the examples and designs described herein but is to be accorded the widest scope consistent with the principles and novel features disclosed herein.
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