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CA3147100A1 - Procedes et systemes d'execution et de suivi de commande adaptatifs - Google Patents

Procedes et systemes d'execution et de suivi de commande adaptatifs Download PDF

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Publication number
CA3147100A1
CA3147100A1 CA3147100A CA3147100A CA3147100A1 CA 3147100 A1 CA3147100 A1 CA 3147100A1 CA 3147100 A CA3147100 A CA 3147100A CA 3147100 A CA3147100 A CA 3147100A CA 3147100 A1 CA3147100 A1 CA 3147100A1
Authority
CA
Canada
Prior art keywords
nucleotides
order
sample
specimen
item
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CA3147100A
Other languages
English (en)
Inventor
Charles Jaros
Robert Tell
Thomas Steinmetz
Elle Christina Moore
Isaiah D. Simpson
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Tempus AI Inc
Original Assignee
Tempus Labs Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from PCT/US2019/056713 external-priority patent/WO2020081795A1/fr
Application filed by Tempus Labs Inc filed Critical Tempus Labs Inc
Priority claimed from PCT/US2020/041862 external-priority patent/WO2021011507A1/fr
Publication of CA3147100A1 publication Critical patent/CA3147100A1/fr
Pending legal-status Critical Current

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H40/00ICT specially adapted for the management or administration of healthcare resources or facilities; ICT specially adapted for the management or operation of medical equipment or devices
    • G16H40/20ICT specially adapted for the management or administration of healthcare resources or facilities; ICT specially adapted for the management or operation of medical equipment or devices for the management or administration of healthcare resources or facilities, e.g. managing hospital staff or surgery rooms
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/40ICT specially adapted for the handling or processing of patient-related medical or healthcare data for data related to laboratory analysis, e.g. patient specimen analysis
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H15/00ICT specially adapted for medical reports, e.g. generation or transmission thereof
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/30ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for calculating health indices; for individual health risk assessment

Landscapes

  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • General Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Epidemiology (AREA)
  • Public Health (AREA)
  • Primary Health Care (AREA)
  • Physics & Mathematics (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Business, Economics & Management (AREA)
  • General Business, Economics & Management (AREA)
  • Biomedical Technology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

L'invention concerne un système et un procédé de traitement d'essai génomique utilisant un moteur de gestion de commande et un ou plusieurs moteurs de traitement de commande, les moteurs de traitement de commande comprenant un moteur de réception, un moteur d'exécution et un moteur de diffusion. Le moteur de réception reçoit un état d'une commande à partir du moteur de gestion de commande. Le moteur d'exécution détermine une séquence d'étapes permettant de faire avancer l'état reçu d'une commande à un état final, désigne de manière itérative chaque étape de la séquence d'étapes telle qu'achevée avant l'initiation de l'étape suivante de la séquence d'étapes, et fait avancer l'état de la commande à un état final lorsqu'une dernière étape de la séquence d'étapes est achevée. Le moteur de diffusion diffuse l'état final de la commande au moteur de gestion de commande. Le moteur de gestion de commande amène l'un des moteurs de traitement de commande à générer un rapport de séquençage de nouvelle génération à partir de l'état final de la commande.
CA3147100A 2019-07-12 2020-07-13 Procedes et systemes d'execution et de suivi de commande adaptatifs Pending CA3147100A1 (fr)

Applications Claiming Priority (7)

Application Number Priority Date Filing Date Title
US201962873693P 2019-07-12 2019-07-12
US62/873,693 2019-07-12
USPCT/US2019/056713 2019-10-17
PCT/US2019/056713 WO2020081795A1 (fr) 2018-10-17 2019-10-17 Systèmes et procédés de recherche et de traitement du cancer basés sur des données
US202016771451A 2020-06-10 2020-06-10
US16/771,451 2020-06-10
PCT/US2020/041862 WO2021011507A1 (fr) 2019-07-12 2020-07-13 Procédés et systèmes d'exécution et de suivi de commande adaptatifs

Publications (1)

Publication Number Publication Date
CA3147100A1 true CA3147100A1 (fr) 2021-01-21

Family

ID=80222056

Family Applications (1)

Application Number Title Priority Date Filing Date
CA3147100A Pending CA3147100A1 (fr) 2019-07-12 2020-07-13 Procedes et systemes d'execution et de suivi de commande adaptatifs

Country Status (3)

Country Link
EP (1) EP3997243A4 (fr)
AU (1) AU2020313915A1 (fr)
CA (1) CA3147100A1 (fr)

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20170022558A1 (en) * 2007-10-30 2017-01-26 Complete Genomics, Inc. Integrated system for nucleic acid sequence and analysis
US9133524B2 (en) * 2010-07-01 2015-09-15 The Regents Of The University Of California Protein kinase ck2 gene mutations, amplifications and polymorphisms in human cancers and methods of use
AU2015357573B2 (en) * 2014-12-05 2022-04-07 Foundation Medicine, Inc. Multigene analysis of tumor samples
TW201816645A (zh) * 2016-09-23 2018-05-01 美商德萊福公司 用於生物樣本的自動化處理及分析、臨床資訊處理及臨床試驗配對之整合系統及方法
CA3061128C (fr) * 2017-01-20 2025-05-06 Lifefoundry, Inc. Systèmes et procédés de prise en charge de multiples processus automatisés
EP4012713B1 (fr) * 2017-06-13 2025-10-29 BostonGene Corporation Systèmes et procédés de génération, de visualisation et de classification de profils fonctionnels moléculaires
CN114023403A (zh) * 2017-11-13 2022-02-08 多发性骨髓瘤研究基金会公司 综合、分子、组学、免疫疗法、代谢、表观遗传学和临床数据库
SG11202009696WA (en) * 2018-04-13 2020-10-29 Freenome Holdings Inc Machine learning implementation for multi-analyte assay of biological samples
US20200258601A1 (en) * 2018-10-17 2020-08-13 Tempus Labs Targeted-panel tumor mutational burden calculation systems and methods
CN115151974A (zh) * 2019-12-13 2022-10-04 格里尔公司 使用补丁卷积神经网络的癌症分类

Also Published As

Publication number Publication date
EP3997243A1 (fr) 2022-05-18
AU2020313915A1 (en) 2022-02-24
EP3997243A4 (fr) 2023-08-30

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