CA3031563C - Spiro-lactam nmda modulators and methods of using same - Google Patents
Spiro-lactam nmda modulators and methods of using same Download PDFInfo
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- HOKKHZGPKSLGJE-GSVOUGTGSA-N N-Methyl-D-aspartic acid Chemical compound CN[C@@H](C(O)=O)CC(O)=O HOKKHZGPKSLGJE-GSVOUGTGSA-N 0.000 title 1
- 150000001875 compounds Chemical class 0.000 claims abstract 36
- 229910052739 hydrogen Inorganic materials 0.000 claims 17
- 239000001257 hydrogen Substances 0.000 claims 16
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims 9
- 239000008194 pharmaceutical composition Substances 0.000 claims 8
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims 6
- 150000002431 hydrogen Chemical class 0.000 claims 5
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims 5
- 150000003839 salts Chemical class 0.000 claims 4
- 125000001424 substituent group Chemical group 0.000 claims 4
- -1 -SH Chemical group 0.000 claims 3
- 125000002887 hydroxy group Chemical group [H]O* 0.000 claims 3
- 208000024827 Alzheimer disease Diseases 0.000 claims 2
- 208000019901 Anxiety disease Diseases 0.000 claims 2
- 208000006096 Attention Deficit Disorder with Hyperactivity Diseases 0.000 claims 2
- 208000036864 Attention deficit/hyperactivity disease Diseases 0.000 claims 2
- 208000019695 Migraine disease Diseases 0.000 claims 2
- 208000029726 Neurodevelopmental disease Diseases 0.000 claims 2
- 208000030886 Traumatic Brain injury Diseases 0.000 claims 2
- 230000036506 anxiety Effects 0.000 claims 2
- 208000015802 attention deficit-hyperactivity disease Diseases 0.000 claims 2
- 125000000440 benzylamino group Chemical group [H]N(*)C([H])([H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 claims 2
- 125000001153 fluoro group Chemical group F* 0.000 claims 2
- 229910052736 halogen Inorganic materials 0.000 claims 2
- 150000002367 halogens Chemical class 0.000 claims 2
- 208000035231 inattentive type attention deficit hyperactivity disease Diseases 0.000 claims 2
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims 2
- 206010027599 migraine Diseases 0.000 claims 2
- 208000004296 neuralgia Diseases 0.000 claims 2
- 208000021722 neuropathic pain Diseases 0.000 claims 2
- 201000000980 schizophrenia Diseases 0.000 claims 2
- 230000003976 synaptic dysfunction Effects 0.000 claims 2
- 230000009529 traumatic brain injury Effects 0.000 claims 2
- 101100111459 Arabidopsis thaliana BHLH67 gene Proteins 0.000 claims 1
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical group [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 claims 1
- 229910003827 NRaRb Inorganic materials 0.000 claims 1
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims 1
- 229910052799 carbon Inorganic materials 0.000 claims 1
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims 1
- 239000013078 crystal Substances 0.000 claims 1
- 239000003814 drug Substances 0.000 claims 1
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 claims 1
- 238000004519 manufacturing process Methods 0.000 claims 1
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims 1
- 238000007911 parenteral administration Methods 0.000 claims 1
- 239000000546 pharmaceutical excipient Substances 0.000 claims 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 claims 1
- 125000002813 thiocarbonyl group Chemical group *C(*)=S 0.000 claims 1
- 238000011200 topical administration Methods 0.000 claims 1
- 102000004868 N-Methyl-D-Aspartate Receptors Human genes 0.000 abstract 1
- 108090001041 N-Methyl-D-Aspartate Receptors Proteins 0.000 abstract 1
- 238000009472 formulation Methods 0.000 abstract 1
- 238000001990 intravenous administration Methods 0.000 abstract 1
- 239000000203 mixture Substances 0.000 abstract 1
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- C07D471/10—Spiro-condensed systems
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- C07D487/10—Spiro-condensed systems
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- C07D207/18—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having one double bond between ring members or between a ring member and a non-ring member
- C07D207/22—Heterocyclic compounds containing five-membered rings not condensed with other rings, with one nitrogen atom as the only ring hetero atom with only hydrogen or carbon atoms directly attached to the ring nitrogen atom having one double bond between ring members or between a ring member and a non-ring member with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
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- C07D207/277—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
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Abstract
Description
CROSS REFERENCE TO RELATED APPLICATIONS
This application claims priority to and the benefit of U.S. Provisional Patent Application No. 62/443,915, filed on January 9, 2017, and U.S. Provisional Patent Application No. 62/369,529, filed on August 1, 2016.
BACKGROUND
An N-methyl-d-aspartate ("NMDA") receptor is a postsynaptic, ionotropic receptor that is responsive to, inter alia, the excitatory amino acids glutamate and glycine and the synthetic compound NMDA. The NMDA receptor controls the flow of both divalent and monovalent ions into the postsynaptic neural cell through a receptor associated channel (Foster et al., Nature 1987, 329:395-396; Mayer et al., Trends in Pharmacol. Sci. 1990, 11:254-260). The NMDA receptor has been implicated during development in specifying neuronal architecture and synaptic connectivity, and may be involved in experience-dependent synaptic modifications. In addition, NMDA receptors are also thought to be involved in long term potentiation and central nervous system disorders.
The NMDA receptor plays a major role in the synaptic plasticity that underlies many higher cognitive functions, such as memory acquisition, retention and learning, as well as in certain cognitive pathways and in the perception of pain (Collingridge et al., The NMDA
Receptor, Oxford University Press, 1994). In addition, certain properties of NMDA receptors suggest that they may be involved in the information-processing in the brain that underlies consciousness itself.
The NMDA receptor has drawn particular interest since it appears to be involved in a broad spectrum of CNS disorders. For instance, during brain ischemia caused by stroke or traumatic injury, excessive amounts of the excitatory amino acid glutamate are released from damaged or oxygen deprived neurons. This excess glutamate binds to the NMDA
receptors Date recue/Date received 2023-03-06
Activation of the NMDA receptor has been shown to be responsible for post-stroke convulsions, and, in certain models of epilepsy, activation of the NMDA
receptor has been shown to be necessary for the generation of seizures. Neuropsychiatric involvement of the NMDA receptor has also been recognized since blockage of the NMDA receptor Ca ++ channel by the animal anesthetic PCP (phencyclidine) produces a psychotic state in humans similar to schizophrenia (reviewed in Johnson, K. and Jones, S., 1990). Further, NMDA
receptors have also been implicated in certain types of spatial learning.
The NMDA receptor is believed to consist of several protein chains embedded in the postsynaptic membrane. The first two types of subunits discovered so far form a large extracellular region, which probably contains most of the allosteric binding sites, several tansmembrane regions looped and folded so as to form a pore or channel, which is permeable to Ca", and a carboxyl terminal region. The opening and closing of the channel is regulated by the binding of various ligands to domains (allosteric sites) of the protein residing on the extracellular surface. The binding of the ligands is thought to affect a conformational change in the overall structure of the protein which is ultimately reflected in the channel opening, partially opening, partially closing, or closing.
A need continues to exist in the art for novel and more specific and/or potent compounds that are capable of modulating NMDA receptors, and provide pharmaceutical benefits. In addition, a need continues to exist in the medical arts for orally deliverable forms of such compounds.
Date recue/Date received 2023-03-06
The present disclosure includes compounds that can be NMDA modulators. More specifically, the present disclosure provides a compound having Formula I:
N ¨R3 m (I), or a pharmaceutically acceptable salt, a stereoisomer, and/or an N-oxide thereof, where:
m is 0, 1 or 2;
n is 1 or 2;
X is 0 or S;
R1 is selected from the group consisting of hydrogen, -C1-C6alky1, -C(0)-Ci-C6alky1, -C(0)-0-Ci-C6alkyl, -C1-C6alkylene-C1-C6cycloalkyl, and phenyl;
R2 is independently selected for each occurrence from the group consisting of hydrogen, cyano, -C1-C6alkyl, and halogen;
R3 is selected from the group consisting of hydrogen, -C1-C6alkyl, -C(0)-R31, -C(0)-0-R32, and phenyl;
R31 is selected from the group consisting of hydrogen, -C1-C6alkyl, -Ci-C6haloalkyl, -C3-C6cycloalkyl, and phenyl;
R32 is selected from the group consisting of hydrogen, -C1-C6alky1, -C1-C6haloalkyl, -C3-C6cycloalkyl, and phenyl;
wherein any aforementioned C1-C6alkyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from ¨C(0)NRaltb, -Nine', hydroxyl, -SH, phenyl, -0-CH2-phenyl, and halogen;
and any aforementioned phenyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from ¨C(0)NRaRb, -NRaRb, -Ci-C3alkoxy, hydroxyl, and halogen;
R4 is independently selected for each occurrence from the group consisting of hydrogen, halogen, hydroxyl, cyano, phenyl, -Ci-C4alkyl, -C2_4alkenyl, -C1_4a1k0xy, ¨C(0)NRaRb, --NRaRb, -N(Ra)-phenyl, -N(Ra)-C1-C6alkylene-phenyl, -N(Ra)-C(0)-Ci_C6alkyl, -N(Ra)-C(0)-Ci_C6alkylene-phenyl, -N(Ra)-C(0)-0-C1-C6alkyl, and ¨N(Ra)-C(0)-0-Date recue/Date received 2023-03-06
IV and Rb are each independently for each occurrence selected from the group consisting of hydrogen, -CI-C4alkyl, and ¨CH2-phenyl; or Ra and Rb taken together with the nitrogen to which they are attached form a 4-6 membered heterocyclic ring;
R5 is independently selected for each occurrence from the group consisting of hydrogen, -Ci-C3alkyl, phenyl, and halogen; wherein phenyl is optionally substituted by one or more substituents selected from RP; or two R5 moieties together with the carbon to which they are attached form a carbonyl moiety or thiocarbonyl moiety;
R6 is independently selected for each occurrence from the group consisting of hydrogen, -C1-C3alkyl, phenyl and halogen; wherein phenyl is optionally substituted by one or more substituents selected from RP; or two R6 moieties together with the carbon to which they are attached form a carbonyl moiety or thiocarbonyl moiety; and RP is independently selected for each occurrence from the group consisting of carboxy, hydroxyl, halogen, -NRaRb, phenyl, -Ci.C6alkoxy, and -Ci.C6alkyl; wherein each phenyl, Ci_C6alkoxy and Ci_C6alkyl is optionally substituted by one or more substituents independently selected from the group consisting of halogen and hydroxyl.
Also provided herein are pharmaceutically acceptable compositions comprising a disclosed compound, and a pharmaceutically acceptable excipient. Such compositions can be suitable for administration to a patient orally, parenterally, topically, intravaginally, intrarectally, sublingually, ocularly, transdermally, or nasally.
In some aspects, compounds described herein bind to NMDA receptors expressing certain NR2 subtypes. In some aspects, the compounds described herein bind to one NR2 subtype and not another. It is appreciated that disclosed compounds may bind to another protein target and/or another NMDA receptor type.
In another aspect, a method of treating a condition selected from the group consisting of autism, anxiety, depression, bipolar disorder, attention deficit disorder, attention deficit Date recue/Date received 2023-03-06
dementia, Alzheimer's disease, Huntington's chorea, spasticity, myoclonus, muscle spasm, Tourette's syndrome, epilepsy, cerebral ischemia, stroke, a brain tumor, traumatic brain injury, cardiac arrest, myelopathy, spinal cord injury, peripheral neuropathy, fibromyalgia, acute neuropathic pain, and chronic neuropathic pain, in a patient in need thereof is provided. Such methods may comprise administering to the patient a pharmaceutically effective amount of a disclosed compound or pharmaceutically acceptable salts, stereoisomers, N-oxides, and hydrates thereof.
In some embodiments, a method of this disclosure includes treating depression.
For example, depression may include one or more of major depressive disorder, dysthymic disorder, psychotic depression, postpartum depression, seasonal affective disorder, bipolar disorder, mood disorder, or depression caused by a chronic medical condition.
In other embodiments, a method of this disclosure may treat schizophrenia. Such schizophrenia may be, for example, paranoid type schizophrenia, disorganized type schizophrenia, catatonic type schizophrenia, undifferentiated type schizophrenia, residual type schizophrenia, post-schizophrenic depression, or simple schizophrenia.
BRIEF DESCRIPTION OF THE DRAWING
Figure lA shows the animals' total exploration time of a familiar object versus a novel object in a second test session (T2) after administration of a vehicle or Compound AA-2.
Figure 1B shows the same experiment as in Figure lA but the difference in the animals' total exploration time between a familiar and a novel object in T2 after administration of a vehicle or Compound AA-2.
Figure 1C shows the same experiment as in Figure lA but the discrimination index (d2), which is the time spent exploring the novel object in T2 minus the time spent exploring Date recue/Date received 2023-03-06
DETAILED DESCRIPTION
This disclosure is generally directed to compounds that are capable of modulating NMDA receptors, for example, NMDA receptor antagonists, agonists, or partial agonists, and compositions and/or methods of using the disclosed compounds. It is appreciated that the disclosed compounds may modulate other protein targets and/or specific NMDA
receptor subtype.
The term "alkyl," as used herein, refers to a saturated straight-chain or branched hydrocarbon, such as a straight-chain or branched group of 1-6, 1-4, or 1-3 carbon atoms, referred to herein as Ci-C6 alkyl, Ci-C4 alkyl, and C1-C3 alkyl, respectively.
Exemplary alkyl ?pups include, but are not limited to, methyl, ethyl, propyl, isopropyl, 2-methyl-l-propyl, 2-methy1-2-propyl, 2-methyl-1-buty1, 3-methyl-1-buty1, 3-methy1-2-buty1, 2,2-dimethyl-1-propyl, 2-methyl-1-pentyl, 3-methyl-l-pentyl, 4-methyl-1-pentyl, 2-methyl-2-pentyl, 3-methy1-2-pentyl, 4-methyl-2-pentyl, 2,2-dimethy1-1-butyl, 3,3-dimethyl-1-butyl, 2-ethyl-1-butyl, butyl, isobutyl, t-butyl, pentyl, isopentyl, neopentyl, and hexyl.
The term "alkoxy," as used herein, refers to an alkyl group attached to an oxygen atom (alkyl-O-). Alkoxy groups can have 1-6 or 2-6 carbon atoms and are referred to herein as Cl-C6 alkoxy and C2-C6 alkoxy, respectively. Exemplary alkoxy groups include, but are not limited to, methoxy, ethoxy, and isopropoxy.
The term "haloalkyl," as used herein, refers to an alkyl group, in which one or more hydrogen atoms of the alkyl group are replaced with one or more independently selected halogens. A haloalkyl group can have 1 to 10 carbon atoms (i.e., CI_ C 10 haloalkyl group), for example, 1 to 6 carbon atoms (i.e., Ci-C 6 haloalkyl group). Examples of haloalkyl groups include -CF3, -C2F5, -CHF2, -CH2F, -CC13, -CHC12, -CH2C1, -CH2CH2C1, -CHFCH2C1, and -C2C15. Perhaloalkyl groups, i.e., alkyl groups where all of the hydrogen atoms are replaced with halogen atoms (e.g., -CF3 and -C2F5), are included within the definition of "haloalkyl."
The teiril "alkylene," as used herein, refers to a divalent alkyl group or a diradical of an alkyl group, which is a linking group capable of fonning a covalent bond with two other moieties. Accordingly, it should be understood that a "divalent" group is a linking group Date recue/Date received 2023-03-06
The tenn "alkenyl," as used herein, refers to an unsaturated straight-chain or branched hydrocarbon having at least one carbon-carbon double bond, such as a straight-chain or branched group of 2-12, 2-10, or 2-6 carbon atoms, referred to herein as C2-C12 alkenyl, C2-Cto alkenyl, and C2_C6 alkenyl, respectively. Exemplary alkenyl groups include vinyl, allyl, butenyl, pentenyl, hexenyl, butadienyl, pentadienyl, hexadienyl, 2-ethylhexenyl, 2-propy1-2-butenyl, and 4-(2-methyl-3-butene)-pentenyl.
The term "carbonyl," as used herein, refers to the radical -C(0)- or C=0.
The term "thiocarbonyl," as used herein, refers to the radical -C(S)- or C=S.
The term "cyano," as used herein, refers to the radical -CN.
The tenn "nitro," as used herein, refers to the radical -NO2.
The phrase, "carbocyclic ring," as used herein, refers to a hydrocarbon ring system in which all the ring atoms are carbon. Exemplary carbocyclic rings including cycloalkyls and phenyl.
The term "cycloalkyl," as used herein, refers to a monocyclic saturated or partially unsaturated hydrocarbon ring system, for example, having 3-6 or 4-6 carbon atoms in its ring system, referred to herein as C3-C6 cycloalkyl or C4-C6 cycloalkyl, respectively. Exemplary cycloalkyl groups include, but are not limited to, cyclohexyl, cyclohexenyl, cyclopentyl, cyclopentenyl, cyclobutyl, and cyclopropyl.
The terms "halo" and "halogen," as used herein, refer to F, Cl, Br, or I.
The twit "heteroatom," as used herein, refers to an atom of any element other than carbon or hydrogen and includes, for example, nitrogen (N), oxygen (0), silicon (Si), sulfur (S), phosphorus (P), and selenium (Se).
The phrase "heterocyclic ring," as used herein, is art-recognized and refer to saturated or partially unsaturated 4- to 7-membered ring structures, whose ring system include one, two or three heteroatoms, such as nitrogen, oxygen, and/or sulfur. A heterocyclic ring can be fused to one or more phenyl, partially unsaturated, or saturated rings. Examples of heterocyclic rings Date recue/Date received 2023-03-06
The terms "hydroxyl" and "hydroxyl," as used herein, refer to the radical -OH.
The term "oxo," as used herein, refers to the radical =0 (double bonded oxygen).
The teim "amino acid," as used herein, includes any one of the following alpha amino acids: isoleucine, alanine, leucine, asparagine, lysine, aspartate, methionine, cysteine, phenylalanine, glutamate, threonine, glutamine, tryptophan, glycine, valine, proline, arginine, serine, histidine, and tyrosine. An amino acid also can include other art-recognized amino acids such as beta amino acids.
The term "compound," as used herein, refers to the compound itself and its pharmaceutically acceptable salts, hydrates, esters and N-oxides including its various stereoisomers and its isotopically-labelled forms, unless otherwise understood from the context of the description or expressly limited to one particular Ruin of the compound, i.e., the compound itself, a specific stereoisomer and/or isotopically-labelled compound, or a pharmaceutically acceptable salt, a hydrate, an ester, or an N-oxide thereof.
It should be understood that a compound can refer to a pharmaceutically acceptable salt, or a hydrate, an ester or an N-oxide of a stereoisomer of the compound and/or an isotopically-labelled compound.
The term "moiety," as used herein, refers to a portion of a compound or molecule.
The compounds of the disclosure can contain one or more chiral centers and/or double bonds and therefore, can exist as stereoisomers, such as geometric isomers, and enantiomers or diastereomers. The term "stereoisomers," when used herein, consists of all geometric isomers, enantiomers and/or diastereomers of the compound. For example, when a compound is shown with specific chiral center(s), the compound depicted without such chirality at that and other chiral centers of the compound are within the scope of the present disclosure, i.e., the compound depicted in two-dimensions with "flat" or "straight" bonds rather than in three dimensions, for example, with solid or dashed wedge bonds. Stereospecific compounds may be designated by the symbols "R" or "S," depending on the configuration of substituents around the stereogenic carbon atom. The present disclosure encompasses all the various stereoisomers of these compounds and mixtures thereof. Mixtures of enantiomers or diastereomers can be Date recue/Date received 2023-03-06
Individual enantiomers and diastereomers of compounds of the present disclosure can be prepared synthetically from commercially available starting materials that contain asymmetric or stereogenic centers, or by preparation of racemic mixtures followed by resolution methods well known to those of ordinary skill in the art. These methods of resolution are exemplified by (1) attachment of a mixture of enantiomers to a chiral auxiliary, separation of the resulting mixture of diastereomers by recrystallization or chromatography and liberation of the optically pure product from the auxiliary, (2) salt formation employing an optically active resolving agent, (3) direct separation of the mixture of optical enantiomers on chiral liquid chromatographic columns, or (4) kinetic resolution using stereoselective chemical or enzymatic reagents. Racemic mixtures also can be resolved into their component enantiomers by well-known methods, such as chiral-phase gas chromatography or crystallizing the compound in a chiral solvent. Stereoselective syntheses, a chemical or enzymatic reaction in which a single reactant forms an unequal mixture of stereoisomers during the creation of a new stereocenter or during the transformation of a pre-existing one, are well known in the art.
Stereoselective syntheses encompass both enantio- and diastereoselective transformations.
See, for example, Carreira and Kvaerno, Classics in Stereoselective Synthesis, Wiley-VCH:
Weinheim, 2009.
Geometric isomers, resulting from the arrangement of substituents around a carbon-carbon double bond or arrangement of substituents around a cycloalkyl or heterocyclic ring, can also exist in the compounds of the present disclosure. The symbol ..
denotes a bond that may be a single, double or triple bond as described herein. Substituents around a carbon-carbon double bond are designated as being in the "Z" or "E" configuration, where the terms "Z" and "E" are used in accordance with IUPAC standards. Unless otherwise specified, structures depicting double bonds encompass both the "E" and "Z" isomers.
Substituents around a carbon-carbon double bond alternatively can be referred to as "cis" or "trans," where "cis" represents substituents on the same side of the double bond and "trans" represents substituents on opposite sides of the double bond. The arrangement of Date recue/Date received 2023-03-06
represents substituents on opposite sides of the plane of the ring. Mixtures of compounds wherein the substituents are disposed on both the same and opposite sides of plane of the ring are designated "cis/trans."
The disclosure also embraces isotopically-labeled compounds which are identical to those compounds recited herein, except that one or more atoms are replaced by an atom having an atomic mass or mass number different from the atomic mass or mass number usually found in nature. Examples of isotopes that can be incorporated into compounds described herein include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorus, fluorine and chlorine, such as 2H ("D"), 3H, 13C, 14C, 15N, 180, 170, 31p, 32p, 35, 6 18F, and 36C1, respectively. For example, a compound described herein can have one or more H atoms replaced with deuterium.
Certain isotopically-labeled compounds (e.g., those labeled with 3H and mC) can be useful in compound and/or substrate tissue distribution assays. Tritiated (i.e., 31-1) and carbon-14 (i.e., 14C) isotopes can be particularly preferred for their ease of preparation and detectability. Further, substitution with heavier isotopes such as deuterium (i.e., 2H) can afford certain therapeutic advantages resulting from greater metabolic stability (e.g., increased in vivo half-life or reduced dosage requirements) and hence can be preferred in some circumstances.
Isotopically-labeled compounds can generally be prepared by following procedures analogous to those disclosed herein, for example, in the Examples section, by substituting an isotopically-labeled reagent for a non-isotopically-labeled reagent.
The phrases "pharmaceutically acceptable" and "pharmacologically acceptable,"
as used herein, refer to compounds, molecular entities, compositions, materials, and/or dosage forms that do not produce an adverse, allergic or other untoward reaction when administered to an animal, or a human, as appropriate. For human administration, preparations should meet sterility, pyrogenicity, general safety and purity standards as required by FDA Office of Biologics standards.
The phrases "pharmaceutically acceptable carrier" and "pharmaceutically acceptable excipient," as used herein, refer to any and all solvents, dispersion media, coatings, isotonic and absorption delaying agents, and the like, that are compatible with pharmaceutical administration. Pharmaceutical acceptable carriers can include phosphate buffered saline Date recue/Date received 2023-03-06
The phrase "pharmaceutical composition," as used herein, refers to a composition comprising at least one compound as disclosed herein formulated together with one or more pharmaceutically acceptable carriers. The pharmaceutical compositions can also contain other active compounds providing supplemental, additional, or enhanced therapeutic functions.
The terms "individual," "patient," and "subject," as used herein, are used interchangeably and include any animal, including mammals, preferably mice, rats, other rodents, rabbits, dogs, cats, swine, cattle, sheep, horses, or primates, and more preferably, humans. The compounds described in the disclosure can be administered to a mammal, such as a human, but can also be administered to other mammals such as an animal in need of veterinary treatment, for example, domestic animals (e.g., dogs, cats, and the like), farm animals (e.g., cows, sheep, pigs, horses, and the like) and laboratory animals (e.g., rats, mice, guinea pigs, and the like). The mammal treated in the methods described in the disclosure is preferably a mammal in which treatment, for example, of pain or depression, is desired.
The telin "treating," as used herein, includes any effect, for example, lessening, reducing, modulating, ameliorating, or eliminating, that results in the improvement of the condition, disease, disorder, and the like, including one or more symptoms thereof. Treating can be curing, improving, or at least partially ameliorating the disorder.
The term "disorder" refers to and is used interchangeably with, the terms "disease,"
"condition," or "illness," unless otherwise indicated.
The term "modulation," as used herein, refers to and includes antagonism (e.g., inhibition), agonism, partial antagonism, and/or partial agonism.
The phrase "therapeutically effective amount," as used herein, refers to the amount of a compound (e.g., a disclosed compound) that will elicit the biological or medical response of a tissue, system, animal or human that is being sought by the researcher, veterinarian, medical doctor or other clinician. The compounds described in the disclosure can be administered in therapeutically effective amounts to treat a disease. A therapeutically effective amount of a compound can be the quantity required to achieve a desired therapeutic and/or prophylactic Date recue/Date received 2023-03-06
As used herein, the term "pharmaceutically acceptable salt" refers to any salt of an acidic or a basic group that may be present in a compound of the present disclosure, which salt is compatible with pharmaceutical administration. As is known to those of skill in the art, "salts" of the compounds of the present disclosure may be derived from inorganic or organic acids and bases.
Examples of salts include, but are not limited to: acetate, adipate, alginate, aspartate, benzoate, benzenesulfonate, bisulfate, butyrate, citrate, camphorate, camphorsulfonate, cyclopentanepropionate, digluconate, dodecylsulfate, ethanesulfonate, fumarate, flucoheptanoate, glycerophosphate, hemisulfate, heptanoate, hexanoate, hydrochloride, hydrobromide, hydroiodide, 2-hydroxyethanesulfonate, lactate, maleate, methanesulfonate, 2-naphthalenesulfonate, nicotinate, oxalate, palmoate, pectinate, persulfate, phenylpropionate, picrate, pivalate, propionate, succinate, tartrate, thiocyanate, tosylate, undecanoate, and the like.
Other examples of salts include anions of the compounds of the present disclosure compounded with a suitable cation such as Nat, NH, and NW4+ (where W can be a C1-4 alkyl group), and the like. For therapeutic use, salts of the compounds of the present disclosure can be pharmaceutically acceptable. However, salts of acids and bases that are non-pharmaceutically acceptable may also find use, for example, in the preparation or purification of a pharmaceutically acceptable compound.
Compounds included in the present compositions that are basic in nature are capable of forming a wide variety of salts with various inorganic and organic acids. The acids that can be used to prepare pharmaceutically acceptable acid addition salts of such basic compounds are those that form non-toxic acid addition salts, i.e., salts containing pharmacologically acceptable anions, including but not limited to, malate, oxalate, chloride, bromide, iodide, nitrate, sulfate, bisulfate, phosphate, acid phosphate, isonicotinate, acetate, lactate, salicylate, citrate, tartrate, oleate, tannate, pantothenate, bitartrate, ascorbate, succinate, maleate, gentisinate, fumarate, gluconate, glucaronate, saccharate, formate, benzoate, glutamate, methanesulfonate, ethanesulfonate, benzenesulfonate, p-toluenesulfonate and pamoate (i.e., 1,1'-methylene-bis-(2-hydroxy-3-naphthoate)) salts.
Date recue/Date received 2023-03-06
Compounds included in the present compositions that include a basic or acidic moiety can also form pharmaceutically acceptable salts with various amino acids. The compounds of the disclosure can contain both acidic and basic groups; for example, one amino and one carboxylic acid group. In such a case, the compound can exist as an acid addition salt, a zwitterion, or a base salt.
The compounds disclosed herein can exist in a solvated form as well as an unsolvated form with pharmaceutically acceptable solvents such as water, ethanol, and the like, and it is intended that the disclosure embrace both solvated and unsolvated forms. In some embodiments, the compound is amorphous. In certain embodiments, the compound is a single polymorph. In various embodiments, the compound is a mixture of polymorphs. In particular embodiments, the compound is in a crystalline form.
The term "prodrug," as used herein, refers to compounds that are transformed in vivo to yield a disclosed compound or a pharmaceutically acceptable salt, hydrate or solvate of the compound. The transformation can occur by various mechanisms (such as by esterase, amidase, phosphatase, oxidative and/or reductive metabolism) in various locations (such as in the intestinal lumen or upon transit into the intestine, blood, or liver).
Prodrugs are well known in the art (see e.g., see Rautio, Kumpulainen et al., Nature Reviews Drug Discovery 2008, 7, 255). For example, if a compound described herein or a pharmaceutically acceptable salt, hydrate or solvate of the compound contains a carboxylic acid functional group, a prodrug can be an ester formed by the replacement of the hydrogen atom of the carboxylic acid group with a group such as (C1-C8)alkyl, (C2-C12)alkanoyloxymethyl, 1-(alkanoyloxy)ethyl having from 4 to 9 carbon atoms, 1-methyl-1-(alkanoyloxy)-ethyl having from 5 to 10 carbon atoms, alkoxycarbonyloxymethyl having from 3 to 6 carbon atoms, 1-(alkoxycarbonyloxy)ethyl having from 4 to 7 carbon atoms, 1-methyl-1-(alkoxycarbonyloxy)ethyl having from 5 to 8 carbon atoms, N-(alkoxycarbonyl)aminomethyl having from 3 to 9 carbon atoms, 1-(N-(alkoxycarbonyl)amino)ethyl having from 4 to 10 carbon atoms, 3-phthalidyl, 4-crotonolactonyl, gamma-butyrolacton-4-yl, di-N,N-(C1-C2)alkylamino(C2-C3)alkyl (such as Date recue/Date received 2023-03-06
Similarly, if a compound described herein contains an alcohol functional group, a proclrug can be foinied by the replacement of the hydrogen atom of the alcohol group with a group such as (C1-C6)alkanoyloxymethyl, 1-((C1-C6)alkanoyloxy)ethyl, 1-methyl-1-((C1-C6)alkanoyloxy)ethyl (C1-C6)alkoxycarbonyloxymethyl, N-(C1-C6)alkoxycarbonylaminomethyl, succinoyl, (Ci-C6)alkanoyl, a-amino(C1-C4)allcanoyl, arylacyl and a-aminoacyl, or a-aminoacyl-a-aminoacyl, where each a-aminoacyl group is independently selected from the naturally occurring L-amino acids, P(0)(OH)2, -P(0)(0(Ci-C6)alky1)2 or glycosyl (the radical resulting from the removal of a hydroxyl group of the hemiacetal Timm of a carbohydrate).
If a compound described herein incorporates an amine functional group, a prodrug can be formed, for example, by creation of an amide or carbamate, an N-acyloxyalkyl derivative, an (oxodioxolenyl) methyl derivative, an N-Mannich base, imine or enamine. In addition, a secondary amine can be metabolically cleaved to generate a bioactive primary amine, or a tertiary amine can metabolically cleaved to generate a bioactive primary or secondary amine.
See, for example, Simplicio, et al., Molecules 2008, 13, 519 and references therein.
Unless defined otherwise, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure pertains.
Throughout the description, where compositions and kits are described as having, including, or comprising specific components, or where processes and methods are described as having, including, or comprising specific steps, it is contemplated that, additionally, there are compositions and kits of the present disclosure that consist essentially of, or consist of, the recited components, and that there are processes and methods according to the present disclosure that consist essentially of, or consist of, the recited processing steps.
In the application, where an element or component is said to be included in and/or selected from a list of recited elements or components, it should be understood that the element or component can be any one of the recited elements or components, or the element or Date recue/Date received 2023-03-06
Further, it should be understood that elements and/or features of a composition or a method described herein can be combined in a variety of ways without departing from the spirit and scope of the present disclosure, whether explicit or implicit herein. For example, where reference is made to a particular compound, that compound can be used in various embodiments of compositions of the present disclosure and/or in methods of the present disclosure, unless otherwise understood from the context. In other words, within this application, embodiments have been described and depicted in a way that enables a clear and concise application to be written and drawn, but it is intended and will be appreciated that embodiments can be variously combined or separated without parting from the present teachings and disclosure(s). For example, it will be appreciated that all features described and depicted herein can be applicable to all aspects of the disclosure(s) described and depicted herein.
The articles "a" and "an" are used in this disclosure to refer to one or more than one (i.e., to at least one) of the grammatical object of the article, unless the context is inappropriate.
By way of example, "an element" means one element or more than one element.
The temi "and/or" is used in this disclosure to mean either "and" or "or"
unless indicated otherwise.
It should be understood that the expression "at least one of' includes individually each of the recited objects after the expression and the various combinations of two or more of the recited objects unless otherwise understood from the context and use. The expression "and/or"
in connection with three or more recited objects should be understood to have the same meaning unless otherwise understood from the context.
The use of the teini "include," "includes," "including," "have," "has,"
"having,"
"contain," "contains," or "containing," including grammatical equivalents thereof, should be understood generally as open-ended and non-limiting, for example, not excluding additional unrecited elements or steps, unless otherwise specifically stated or understood from the context.
Where the use of the term "about" is before a quantitative value, the present disclosure also include the specific quantitative value itself, unless specifically stated otherwise. As used Date recue/Date received 2023-03-06
Where a percentage is provided with respect to an amount of a component or material in a composition, the percentage should be understood to be a percentage based on weight, unless otherwise stated or understood from the context.
Where a molecular weight is provided and not an absolute value, for example, of a polymer, then the molecular weight should be understood to be an average molecule weight, unless otherwise stated or understood from the context.
It should be understood that the order of steps or order for performing certain actions is immaterial so long as the present disclosure remain operable. Moreover, two or more steps or actions can be conducted simultaneously.
At various places in the present specification, substituents are disclosed in groups or in ranges. It is specifically intended that the description include each and every individual subcombination of the members of such groups and ranges. For example, the term "Ci-6 alkyl"
is specifically intended to individually disclose CI, C2, C3, C4, C5, C6, Cl-C6, Cl-05, Cl-C4, Cl-C3, Cl-C2, C2-C6, C2-05, C2-C4, C2-C3, C3-C6, C3-05, C3-C4, C4-C6, C4-05, and C5-C6 alkyl. By way of other examples, an integer in the range of 0 to 40 is specifically intended to individually disclose 0, 1,2, 3,4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, and 40, and an integer in the range of 1 to 20 is specifically intended to individually disclose 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, and 20. Additional examples include that the phrase "optionally substituted with 1-5 substituents" is specifically intended to individually disclose a chemical group that can include 0, 1, 2, 3, 4, 5, 0-5, 0-4, 0-3, 0-2, 0-1, 1-5, 1-4, 1-3, 1-2, 2-5, 2-4, 2-3, 3-5, 3-4, and 4-5 substituents.
The use of any and all examples, or exemplary language herein, for example, "such as"
or "including," is intended merely to illustrate better the present disclosure and does not pose a limitation on the scope of the disclosure unless claimed. No language in the specification should be construed as indicating any non-claimed element as essential to the practice of the present disclosure.
Date recue/Date received 2023-03-06
Various aspects of the disclosure are set forth herein under headings and/or in sections for clarity; however, it is understood that all aspects, embodiments, or features of the disclosure described in one particular section are not to be limited to that particular section but rather can apply to any aspect, embodiment, or feature of the present disclosure.
Compounds Disclosed compounds include a compound having Formula I:
X
N ¨R3 ,N
R2 R-2 R6 (I), or a pharmaceutically acceptable salt, stereoisomer, and/or N-oxide thereof, wherein:
m is 0, 1 or 2;
n is 1 or 2;
X is 0 or S;
R1 is selected from the group consisting of hydrogen, -C1-C6alkyl, -C(0)-Ci-C6alkyl, -C(0)-0-Ci-C6a1kyl, -Ci-C6a1kylene-C1-C6cycloalkyl, and phenyl;
R2 is independently selected for each occurrence from the group consisting of hydrogen, cyano, -Ci-C6alkyl, and halogen;
R3 is selected from the group consisting of hydrogen, -C1-C6alky1, -C(0)-R31, -C(0)-0-R32, and phenyl;
R31 is selected from the group consisting of hydrogen, -C1-C6alkyl, -Ci-C6haloalkyl, -C3-C6cycloalkyl, and phenyl;
R32 is selected from the group consisting of hydrogen, -C1-C6alkyl, -Ci-C6haloalkyl, -C3-C6cycloalkyl, and phenyl;
Date recue/Date received 2023-03-06
R4 is independently selected for each occurrence from the group consisting of hydrogen, halogen, hydroxyl, cyano, phenyl, -C1-C4alkyl, -C2-4a1keny1, -C1-4alkoxy, ¨C(0)NRaRb, -N(Ra)-phenyl, -N(W)-C1-C6alkylene-phenyl, -N(W)-C(0)-Ci_C6alkyl, -N(Ra)-C(0)-Ci_C6alky1ene-phenyl, -N(Ra)-C(0)-0-C1_C6alkyl, and ¨N(Ra)-C(0)-0-C6allcylene-phenyl; wherein Ci_Caalkyl, C1_C6alkylene, C2_C4alkeny1, Ci_C4alkoxy, and phenyl are optionally substituted by one or more substituents selected from RP; or two R4 moieties, when present on adjacent carbons, form a 3-membered carbocyclic ring taken together with the adjacent carbons to which they are attached, optionally substituted by one or two substituents independently selected from the group consisting of halogen, hydroxyl, -Cl-C3alkyl, -C1-C3alkoxy, ¨C(0)NRaRb, and -NRaRb;
Ra and Rb are each independently for each occurrence selected from the group consisting of hydrogen, -Ci-C4alkyl, and ¨CH2-phenyl; or R. and Rb taken together with the nitrogen to which they are attached form a 4-6 membered heterocyclic ring;
R5 is independently selected for each occurrence from the group consisting of hydrogen, -C1-C3alkyl, phenyl, and halogen; wherein phenyl is optionally substituted by one or more substituents selected from RP; or two R5 moieties together with the carbon to which they are attached form a carbonyl moiety or thiocarbonyl moiety;
R6 is independently selected for each occurrence from the group consisting of hydrogen, -C1-C3alkyl, phenyl and halogen; wherein phenyl is optionally substituted by one or more substituents selected from RP; or two R6 moieties together with the carbon to which they are attached form a carbonyl moiety or thiocarbonyl moiety; and RP is independently selected for each occurrence from the group consisting of carboxy, hydroxyl, halogen, -Ninth, phenyl, -Ci_C6alkoxy, and -Ci_C6alkyl; wherein each phenyl, C1_C6alkoxy and Ci_C6alkyl is optionally substituted by one or more substituents independently selected from the group consisting of halogen and hydroxyl.
Ti certain embodiments, m is 2 and n is 1.
Date recue/Date received 2023-03-06
x Few R5 R1-N N¨R3 R2R2R2 Y (Ia), where the variables are as defined herein.
In various embodiments, R2 for each occurrence is hydrogen.
In certain embodiments, m is 0 and n is 2.
In some embodiments, two R6 moieties together with the carbon to which they are attached form a carbonyl moiety. For example, such embodiments can include a compound having Formula Ib:
N¨R3 0 NJ\
R1 0 (Ib).
In certain embodiments, le is independently selected for each occurrence from the group consisting of hydrogen, halogen, hydroxyl, -C1-C4alkyl, -NRaRb, -N(Ra)-phenyl, -N(W)-C1-C6alkylene-phenyl, -N(Ra)-C(0)-Ci-C6alkyl, and -N(Ra)-C(0)-0-Ci_Coalkyl;
wherein Ra and Rb are each independently for each occurrence selected from the group consisting of hydrogen and -C1-C3alkyl.
For example, R4 can be independently selected for each occurrence from the group Me io N
consisting of hydrogen, fluoro, hydroxyl, methyl, -NH2, H , H , Me 0y0-tBu N
,and H'N
In some embodiments, R5 may independently selected for each occurrence from the group consisting of hydrogen, C1-C3alkyl, and phenyl.
Date recue/Date received 2023-03-06
For example, R1 can be ¨C(0)-0-CH2-phenyl.
In certain embodiments, R3 is hydrogen. In particular embodiments, R3 is ¨C(0)-0-Ci-C6alkyl. For example, R3 can be ¨C(0)-0-tert-butyl.
In certain embodiments, R3 is -Ci-C6alkyl, where Ci-C6alkyl is optionally substituted by one, two or three substituents each independently selected from ¨C(0)NRaRb, -NRaRb, hydroxyl, -SH, phenyl, -0-CH2-phenyl, and halogen; and wherein phenyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from ¨C(0)NRaRb, JaRb -C1-C3alkoxy, hydroxyl, and halogen. For example, R3 can be selected from the group consisting of:
Date recue/Date received 2023-03-06
, and I) NµRb where:
R66 is selected from the group consisting of hydrogen and ¨C1-C3a1koxy; and W
and le are each independently selected for each occurrence from the group consisting of hydrogen and ¨Ci-C6alkyl.
For example, in some embodiments, R66 is hydrogen or methoxy. In some embodiments, Ra and Rb is hydrogen.
In certain embodiments, 12.1 and/or R3 independently can be an amino acid or a derivative of an amino acid, for example, an alpha "amino amide" represented by H2N-CH(amino acid side chain)-C(0)NH2. In certain embodiments, the nitrogen atom of the amino group of the amino acid or the amino acid derivative is a ring nitrogen in a chemical formula described herein. In such embodiments, the carboxylic acid of the amino acid or the amide group of an amino amide (amino acid derivative) is not within the ring structure, i.e., not a ring atom_ In certain embodiments, the carboxylic acid group of the amino acid or the amino acid derivative forms an amide bond with a ring nitrogen in a chemical foimula disclosed herein, thereby providing an amino amide, where the amino group of the amino amide is not within the ring structure, i.e., not a ring atom. In certain embodiments, It1 and/or Wa independently can be an alpha amino acid, an alpha amino acid derivative, and/or another amino acid or amino acid derivative such as a beta amino acid or a beta amino acid derivative, for example, a beta amino amide.
Disclosed compounds can include a compound having Formula II:
33R"Ra Rjs R1 (II) or a pharmaceutically acceptable salt, a stereoisomer, and/or an N-oxide thereof, wherein:
Date recue/Date received 2023-03-06
R2 is selected from the group consisting of hydrogen, -C1-C6alkyl, -C(0)-R21, -C(0)-O-R22, ic 22, and phenyl;
R21 is selected from the group consisting of hydrogen, -C1-C6alkyl, -Ci-C6haloalkyl, -C3-C6cycloalkyl, and phenyl;
R22 is selected from the group consisting of hydrogen, -Cl-C6alkyl, -C1-C6haloa1kyl, -C3-C6cycloalkyl, and phenyl;
wherein any aforementioned C1-C6alkyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from -C(0)NR1ltb, -NRaRb, hydroxyl, -SH, phenyl, -0-CH2-phenyl, and halogen;
and any aforementioned phenyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from -C(0)NRaRb, -NRaRb, -Ci-C3alkoxy, hydroxyl, and halogen;
R33 and le are independently selected for each occurrence from the group consisting of hydrogen, halogen, hydroxyl, phenyl, -C1-C4alkyl, -C2-C4alkenyl, -Cl-C4alkoxy, -C(0)NRaRb, -NRaRb, -N(Ra)-phenyl, -N(Ra)-C1-C6alkylene-phenyl, -N(Ra)-C(0)-C1_ 6a1ky1, -N(W)-C(0)-C1_6alkylene-phenyl, -N(W)-C(0)-0-Ci_6alkyl, and _N(W)C(0)0-Ci6alkylene-phenyl; wherein C1_4alkyl, C1_6alkylene, C2_4allcenyl, C1_4alkoxy, and phenyl are optionally substituted by one or more substituents selected from le; or R33 and R4 together form a 3-membered carbocyclic ring with the adjacent carbons to which they are attached, wherein the 3-membered carbocyclic ring is optionally substituted by one or two substituents independently selected from the group consisting of halogen, hydroxyl, -C1-C3alkyl, -C1-C3alkoxy, -C(0)NRaRb, and -NRaRb;
Ra and Rb are each independently for each occurrence selected from the group consisting of hydrogen and -C1-C3alkyl; or W and Rb taken together with the nitrogen to which they are attached form a 4-6 membered heterocyclic ring; and R' is independently for each occurrence selected from the group consisting of carboxy, hydroxyl, halogen, -NRaRb, phenyl, Ci.6alkoxy, and C1_6a1ky1 optionally substituted by one or more substituents independently selected from the group consisting of halogen and hydroxyl.
Ti certain embodiments, R1 is hydrogen.
Date recue/Date received 2023-03-06
In certain embodiments, the nitrogen atom of the amino group of the amino acid or the amino acid derivative is a ring nitrogen in a chemical formula described herein. In such embodiments, the carboxylic acid of the amino acid or the amide group of an amino amide (amino acid derivative) is not within the ring structure, i.e., not a ring atom. In certain embodiments, the carboxylic acid group of the amino acid or the amino acid derivative forms an amide bond with a ring nitrogen in a chemical formula disclosed herein, thereby providing an amino amide, where the amino group of the amino amide is not within the ring structure, i.e., not a ring atom.
In certain embodiments, R1 can be an alpha amino acid, an alpha amino acid derivative, and/or another amino acid or amino acid derivative such as a beta amino acid or a beta amino acid derivative, for example, a beta amino amide.
In certain embodiments, R2 is -C(0)-0-R22. For example, R2 can be -C(0)0Et or -C(0)0H.
In certain embodiments, R33 and R4 are independently selected for each occurrence from the group consisting of hydrogen, halogen, hydroxyl, -C1-C4alkyl, -NRaRb, -N(Ra)-phenyl, -N(Ra)-C1-C6alkylene-phenyl, -N(W)-C(0)-C1.6alkyl, and -N(W)-C(0)-0-C1.6alkyl;
wherein Ra and Rb are each independently for each occurrence selected from the group consisting of hydrogen and -C1-C4alky1.
For example, 103 and R4 can be independently selected for each occurrence from the Me Oy-,N14 group consisting of hydrogen, fluoro, hydroxyl, methyl, -NH2, " H
PH
N,5 , and ::N:-tBu In certain embodiments, a disclosed compound is selected from the Examples described herein, for example, Examples AA-1 and AA-2, and Examples AB to BW and/or depicted in Table 1, and includes pharmaceutically acceptable salts, stereoisomers, and/or N-oxides thereof.
The compounds of the present disclosure and formulations thereof may have a plurality of chiral centers. Each chiral center may be independently R, S. or any mixture of R and S. For Date recue/Date received 2023-03-06
configuration.
Disclosed compounds may provide for efficient cation channel opening at the NMDA
receptor, e.g. may bind or associate with the glutamate site or glycinc site or other modulatory site of the NMDA receptor to assist in opening the cation channel. The disclosed compounds may be used to regulate (turn on or turn off) the NMDA receptor through action as an agonist or antagonist.
The compounds described herein, in some embodiments, may bind to a specific NMDA
receptor subtypes. For example, a disclosed compound may bind to one NMDA
subtype and not another. In certain embodiments, a disclosed compound may bind to one, or more than one NMDA subtype, and/or may have substantially less (or substantial no) binding activity to certain other NMDA subtypes. For example, in some embodiments, a disclosed compound (e.g., compound A) binds to NR2A with substantially no binding to NR2D. In some embodiments, a disclosed compound (e.g., compound B) binds to NR2B and NR2D
with substantially lower binding to NR2A and NR2C.
The compounds as described herein may bind to NMDA receptors. A disclosed compound may bind to the NMDA receptor resulting in agonist-like activity (facilitation) over a certain dosing range and/or may bind to the NMDA receptor resulting in antagonist-like activity (inhibition) over a certain dosing range. In some embodiments, a disclosed compound Date recue/Date received 2023-03-06
The disclosed compounds may exhibit a high therapeutic index. The therapeutic index, as used herein, refers to the ratio of the dose that produces a toxicity in 50% of the population (i.e., TD50) to the minimum effective dose for 50% of the population (i.e., ED50). Thus, the therapeutic index = (TD50):(ED50). In some embodiments, a disclosed compound may have a therapeutic index of at least about 10:1, at least about 50:1, at least about 100:1, at least about 200:1, at least about 500:1, or at least about 1000:1.
Compositions In other aspects of the disclosure, a pharmaceutical formulation or a pharmaceutical composition including a disclosed compound and a pharmaceutically acceptable excipient is provided. In some embodiments, a pharmaceutical composition comprises a racemic mixture of one or more of the disclosed compounds.
A formulation can be prepared in any of a variety of forms for use such as for administering an active agent to a patient, who may be in need thereof, as are known in the pharmaceutical arts. For example, the pharmaceutical compositions of the present disclosure can be formulated for administration in solid or liquid form, including those adapted for the following: (1) oral administration, for example, drenches (aqueous or non-aqueous solutions or suspensions), tablets (e.g., those targeted for buccal, sublingual, and/or systemic absorption), boluses, powders, granules, and pastes for application to the tongue; (2) parenteral administration by, for example, subcutaneous, intramuscular, intraperitoneal, intravenous or epidural injection as, for example, a sterile solution or suspension, or sustained-release formulation; (3) topical administration, for example, as a cream, ointment, or a controlled-release patch or spray applied to the skin; (4) intravaginal or intrarectal administration, for example, as a pessary, cream or foam; (5) sublingual administration; (6) ocular administration;
(7) transdermal administration; or (8) nasal administration.
For example, pharmaceutical compositions of the disclosure can be suitable for delivery to the eye, i.e., ocularly. Related methods can include administering a pharmaceutically effective amount of a disclosed compound or a pharmaceutical composition including a disclosed compound to a patient in need thereof, for example, to an eye of the patient, where Date recue/Date received 2023-03-06
Amounts of a disclosed compound as described herein in a formulation may vary according to factors such as the disease state, age, sex, and weight of the individual. Dosage regimens may be adjusted to provide the optimum therapeutic response. For example, a single bolus may be administered, several divided doses may be administered over time or the dose may be proportionally reduced or increased as indicated by the exigencies of the therapeutic situation. It is especially advantageous to formulate parenteral compositions in dosage unit form for ease of administration and uniformity of dosage. Dosage unit form as used herein refers to physically discrete units suited as unitary dosages for the mammalian subjects to be treated; each unit containing a predetermined quantity of active compound calculated to produce the desired therapeutic effect in association with the required pharmaceutical carrier.
The specification for the dosage unit forms are dictated by and directly dependent on (a) the unique characteristics of the compound selected and the particular therapeutic effect to be achieved, and (b) the limitations inherent in the art of compounding such an active compound for the treatment of sensitivity in individuals.
Therapeutic compositions typically must be sterile and stable under the conditions of manufacture and storage. The composition can be formulated as a solution, microemulsion, liposome, or other ordered structure suitable to high drug concentration. The carrier can be a solvent or dispersion medium containing, for example, water, ethanol, polyol (for example, glycerol, propylene glycol, and liquid polyethylene glycol, and the like), and suitable mixtures thereof. The proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersion and by the use of surfactants. In many cases, it will be preferable to include isotonic agents, for example, sugars, polyalcohols such as mannitol, sorbitol, or sodium chloride in the composition.
Prolonged absorption of the injectable compositions can be brought about by including in the composition an agent which delays absorption, for example, monostearate salts and gelatin.
The compounds can be administered in a time release formulation, for example in a composition which includes a slow release polymer. The compounds can be prepared with carriers that will protect the compound against rapid release, such as a controlled release formulation, including implants and microencapsulated delivery systems.
Biodegradable, Date recue/Date received 2023-03-06
Sterile injectable solutions can be prepared by incorporating the compound in the required amount in an appropriate solvent with one or a combination of ingredients enumerated above, as required, followed by filtered sterilization. Generally, dispersions are prepared by incorporating the active compound into a sterile vehicle which contains a basic dispersion medium and the required other ingredients from those enumerated above. In the case of sterile powders for the preparation of sterile injectable solutions, the preferred methods of preparation are vacuum drying and freeze-drying which yields a powder of the active ingredient plus any additional desired ingredient from a previously sterile-filtered solution thereof.
In some embodiments, a compound can be formulated with one or more additional compounds that enhance the solubility of the compound.
Methods Methods of this disclosure for treating a condition in a patient in need thereof generally include administering a therapeutically effective amount of a compound described herein or a composition including such a compound are provided. In some embodiments, the condition may be a mental condition. For example, a mental illness may be treated. In another aspect, a nervous system condition may be treated. For example, a condition that affects the central nervous system, the peripheral nervous system, and/or the eye may be treated.
In some embodiments, neurodegenerative diseases may be treated.
In some embodiments, the methods include administering a compound to treat patients suffering from autism, anxiety, depression, bipolar disorder, attention deficit disorder, attention deficit hyperactivity disorder (ADHD), schizophrenia, a psychotic disorder, a psychotic symptom, social withdrawal, obsessive-compulsive disorder (OCD), phobia, post-traumatic stress syndrome, a behavior disorder, an impulse control disorder, a substance abuse disorder (e.g., a withdrawal symptom, opiate addiction, nicotine addiction, and ethanol addition), a sleep disorder, a memory disorder (e.g., a deficit, loss, or reduced ability to make new memories), a learning disorder, urinary incontinence, multiple system atrophy, progressive supra-nuclear palsy, Friedrich's ataxia, Down's syndrome, fragile X syndrome, tuberous sclerosis, olivio-Date recue/Date received 2023-03-06
In some embodiments, methods of treating a memory disorder associated with aging, schizophrenia, special learning disorders, seizures, post-stroke convulsions, brain ischemia, hypoglycemia, cardiac arrest, epilepsy, Lewy body dementia, migraine, AIDS
dementia, Huntington's chorea, Parkinson's disease, early stage Alzheimer's disease, and Alzheimer's disease are provided.
In certain embodiments, methods for treating schizophrenia are provided. For example, paranoid type schizophrenia, disorganized type schizophrenia (i.e., hebephrenic schizophrenia), catatonic type schizophrenia, undifferentiated type schizophrenia, residual type schizophrenia, post-schizophrenic depression, and simple schizophrenia may be treated using the methods and compositions disclosed herein. Psychotic disorders such as schizoaffective disorders, delusional disorders, brief psychotic disorders, shared psychotic disorders, and psychotic disorders with delusions or hallucinations may also be treated using the compositions disclosed herein.
Paranoid schizophrenia may be characterized where delusions or auditory hallucinations are present, but thought disorder, disorganized behavior, or affective flattening are not.
Delusions may be persecutory and/or grandiose, but in addition to these, other themes such as jealousy, religiosity, or somatization may also be present. Disorganized type schizophrenia may be characterized where thought disorder and flat affect are present together. Catatonic type schizophrenia may be characterized where the patient may be almost immobile or exhibit agitated, purposeless movement. Symptoms can include catatonic stupor and waxy flexibility.
Undifferentiated type schizophrenia may be characterized where psychotic symptoms are present but the criteria for paranoid, disorganized, or catatonic types have not been met.
Residual type schizophrenia may be characterized where positive symptoms are present at a low intensity only. Post-schizophrenic depression may be characterized where a depressive episode arises in the aftermath of a schizophrenic illness where some low-level schizophrenic symptoms may still be present. Simple schizophrenia may be characterized by insidious and Date recue/Date received 2023-03-06
In some embodiments, methods are provided for treating psychotic symptoms that may be present in other mental disorders, including, but not limited to, bipolar disorder, borderline personality disorder, drug intoxication, and drug-induced psychosis. In certain embodiments, methods for treating delusions (e.g., "non-bizarre") that may be present in, for example, delusional disorder are provided.
In various embodiments, methods for treating social withdrawal in conditions including, but not limited to, social anxiety disorder, avoidant personality disorder, and schizotypal personality disorder are provided.
In some embodiments, the disclosure provides methods for treating a neurodevelopmental disorder related to synaptic dysfunction in a patient in need thereof, where the methods generally include administering to the patient a therapeutically effective amount of a disclosed compound, or a pharmaceutical composition including a disclosed compound. In certain embodiments, the neurodevelopmental disorder related to synaptic dysfunction can be Rett syndrome also known as cerebroatrophic hyperammonemia, MECP2 duplication syndrome (e.g., a MECP2 disorder), CDKL5 syndrome, fragile X syndrome (e.g., a disorder), tuberous sclerosis (e.g., a TSC1 disorder and/or a TSC2 disorder), neurofibromatosis (e.g., a NF1 disorder), Angelman syndrome (e.g., a UBE3A disorder), the PTEN
hamartoma tumor syndrome, Phelan-McDermid syndrome (e.g., a SHANK3 disorder), or infantile spasms.
In particular embodiments, the neurodevelopmental disorder can be caused by mutations in the neuroligin (e.g., a NLGN3 disorder and/or a NLGN2 disorder) and/or the neurexin (e.g., a NRXN1 disorder).
In some embodiments, methods are provided for treating neuropathic pain. The neuropathic pain may be acute or chronic. In some cases, the neuropathic pain may be associated with a condition such as herpes, HIV, traumatic nerve injury, stroke, post-ischemia, chronic back pain, post-herpetic neuralgia, fibromyalgia, reflex sympathetic dystrophy, complex regional pain syndrome, spinal cord injury, sciatica, phantom limb pain, diabetic neuropathy such as diabetic peripheral neuropathy ("DPN"), and cancer chemotherapeutic-induced neuropathic pain. Methods for enhancing pain relief and for providing analgesia to a patient are also provided.
Date recue/Date received 2023-03-06
Also provided herein is a method of modulating an autism target gene expression in a cell comprising contacting a cell with an effective amount of a compound described herein.
The autism gene expression may be for example, selected from ABAT, APOE, CHRNA4, GABRA5,GFAP, GRIN2A, PDYN, and PENK. In certain embodiments, a method of modulating synaptic plasticity in a patient suffering from a synaptic plasticity related disorder is provided, comprising administering to the patient an effective amount of a compound.
In some embodiments, a method of treating Alzheimer's disease, or e.g., treatment of memory loss that e.g., accompanies early stage Alzheimer's disease, in a patient in need thereof is provided, comprising administering a compound. Also provided herein is a method of modulating an Alzheimer's amyloid protein (e.g., beta amyloid peptide, e.g.
the isoform A131-42), in-vitro or in-vivo (e.g. in a cell) comprising contacting the protein with an effective amount of a compound is disclosed. For example, in some embodiments, a compound may block the ability of such amyloid protein to inhibit long-term potentiation in hippocampal slices as well as apoptotic neuronal cell death. In some embodiments, a disclosed compound may provide neuroprotective properties to a Alzheimer's patient in need thereof, for example, may provide a therapeutic effect on later stage Alzheimer's ¨associated neuronal cell death.
In certain embodiments, the disclosed methods include treating a psychosis or a pseudobulbar affect ("PBA") that is induced by another condition such as a stroke, amyotrophic lateral sclerosis (ALS or Lou Gehrig's disease), multiple sclerosis, traumatic brain injury, Alzheimer's disease, dementia, and/or Parkinson's disease. Such methods, as with other methods of the disclosure, include administration of a pharmaceutically effective amount of a disclosed compound to a patient in need thereof.
Date recue/Date received 2023-03-06
Exemplary depression conditions that are expected to be treated according to this aspect include, but are not limited to, major depressive disorder, dysthymic disorder, psychotic depression, postpartum depression, premenstrual syndrome, premenstrual dysphoric disorder, seasonal affective disorder (SAD), bipolar disorder (or manic depressive disorder), mood disorder, and depressions caused by chronic medical conditions such as cancer or chronic pain, chemotherapy, chronic stress, and post traumatic stress disorders. In addition, patients suffering from any form of depression often experience anxiety. Various symptoms associated with anxiety include fear, panic, heart palpitations, shortness of breath, fatigue, nausea, and headaches among others. Anxiety or any of the symptoms thereof may be treated by administering a compound as described herein.
Also provided herein are methods of treating a condition in treatment-resistant patients, e.g., patients suffering from a mental or central nervous system condition that does not, and/or has not, responded to adequate courses of at least one, or at least two, other compounds or therapeutics. For example, provided herein is a method of treating depression in a treatment resistant patient, comprising a) optionally identifying the patient as treatment resistant and b) administering an effective dose of a compound to said patient.
In some embodiments, a compound described herein may be used for acute care of a patient. For example, a compound may be administered to a patient to treat a particular episode (e.g., a severe episode) of a condition disclosed herein.
Also provided herein are combination therapies comprising a compound of the disclosure in combination with one or more other active agents. For example, a compound may be combined with one or more antidepressants, such as tricyclic antidepressants, MAO-I's, SSRI's, and double and triple uptake inhibitors and/or anxiolytic drugs.
Exemplary drugs that may be used in combination with a compound include Anafranil, Adapin, Aventyl, Elavil, Norpramin, Pamelor, Pertofrane, Sinequan, Sunnontil, Tofranil, Vivactil, Pamate, Nardil, Marplan, Celexa, Lexapro, Luvox, Paxil, Prozac, Zoloft, Wellbutrin, Effexor, Remeron, Cymbalta, Desyrel (trazodone), and Ludiomill. In another example, a compound may be combined with an antipsychotic medication. Non-limiting examples of antipsychotics include Date recue/Date received 2023-03-06
EXAMPLES
The following examples are provided for illustrative purposes only, and are not intended to limit the scope of the disclosure.
The following abbreviations may be used herein and have the indicated definitions: Ac is acetyl (-C(0)CH3), AIDS is acquired immune deficiency syndrome, Boc and BOC
are tert-butoxycarbonyl, Boc20 is di-tert-butyl dicarbonate, Bn is benzyl, BOM-C1 is benzyloxymethyl chloride, CAN is ceric ammonium nitrate, Cbz is carboxybenzyl, DCC is NN1-dicyclohexylcarbodiimide, DCM is dichloromethane, DIAD is diisopropyl azodicarboxylate, DMAP is 4-dimethylaminopyridine, DMS is dimethyl sulfide, DIPEA is N,N-diisopropylethylamine, DMF is N,N-dimethylformamide, DMSO is dimethyl sulfoxide, DTAD
is diethyl azodicarboxylate, EDC and EDCI are 1-ethy1-3-(3-dimethylaminopropyl)carbodiimide hydrochloride, ESI is electrospray ionization, Et0Ac is ethyl acetate, Gly is glycine, h is hour, HATU is 2-(7-aza-1H-benzotriazole-1-y1)-1,1,3,3-tetramethyluronium hexafluorophosphate, HOBt is hydroxybenzotriazole; HIV is human immunodeficiency virus, HPLC is high performance liquid chromatography, LCMS
is liquid chromatography/mass spectrometry, LiHMDS is lithium hexamethyldisilazane, mCPBA is meta-chloroperoxybenzoic acid, MTBE is methyl tert-butyl ether, NMDAR is N-methyl-d-apartate receptor, NMR is nuclear magnetic resonance, Pd/C is palladium on carbon, PMB is para-methoxybenzyl, RT is room temperature (e.g., from about 20 C to about 25 C), TBAF is tetra-n-butylammonium fluoride, TBS and TBDMS are tert-butyldimethylsilyl, TEA
is triethylamine, TLC is thin layer chromatography, TI-A is trifluoroacetic acid, and TPP is triphenylphosphine, THF is tetrahydrofuran.
A. SYNTHESIS OF COMPOUNDS
Synthesis of AA-rac, AA-1 & AA-2:
Date recue/Date received 2023-03-06
\
I \ nt-A Chiral LiHMDS 0 Separation 0 AA-rac AA-1 AA-2 r , H ,N
Step-A
40 THF, TEA, ' Bromoacetonitrile ...
SM2 Int-A
Synthesis of 2-oxopiperidine-4-carboxylic acid (1):
To a stirred solution of 2-oxo-1,2-dihydropyridine-4-carboxylic acid (SM1) (500 g, 3.59 mol) in methanol (10 L) was added palladium hydroxide (150 g) into a 20 L
autoclave under N2 atmosphere. The reaction mixture was stirred under H2 atmosphere (5 kg/
cm2) at RT for 18 h. After consumption of the starting material (monitored by LCMS), the reaction mixture was filtered through a pad of celiteTM and concentrated under reduced pressure.
Obtained reside was triturated with diethyl ether (2.5 L) and dried under vacuum to afford compound 1 (450 g, 85 %) as off white solid. 11-1 NMR (500 MHz, DMSO-d6): 8 12.37 (s, 1H), 7.44 (s, 1H), 3.16-3.12 (m, 2H), 2.78-2.71 (m, 1H), 2.33-2.21 (m, 2H), 1.98-1.92 (m, 1H), 1.74-1.63 (m, 1H) LCMS (m/z): 144.2 [M++1].
Synthesis of methyl 2-oxopiperidine-4-carboxylate (2):
To a stirring solution of compound 1 (250 g, 1.74 mol) in Me0H (2.5 L) was added DCC (540 g, 2.62 mol) under nitrogen atmosphere at RT and stirred for 16 h.
After consumption of the starting material (by TLC), reaction mixture was diluted with diethyl ether (2.5 L) and allowed to stir for 2 h. The obtained solid (DCU) was filtered off, the filtrate was concentrated under reduced pressure to obtain a solid having desired compound along with some amounts of DCU and other impurities. This solid after another cycle of trituration with Et20 (2 L) was treated with MeOH:Et0Ac (1:9, 3 L) for 3 h. The undissolved solid (DCU) was Date recue/Date received 2023-03-06
(m/z): 158.2 [M++1].
Synthesis of 2-(4-methoxyb enzy1)-2,7-diazaspiro [3.5]n0nane-1,6-dione (AA-rac, AA-1 &
AA-2):
To a stirred solution of compound 2 (150 g, 0.955 mol) in dry THF (1.25 L) was added LiHMDS (1.0 M in THF, 1.9 L, 1.91 mol) slowly at -78 C under nitrogen atmosphere. The reaction temperature was raised to -20 C and stirred for 1 h. Int-A (167 g, 0.955 mol) in THF
(250 mL) was added drop wise at -78 C. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), the reaction was quenched with aqueous NH4C1 (1 L) at 0 C, added Et20 (1.5 L) and stirred for 10 minutes. Organic layer was separated and aqueous layer was extracted with 10%
Me0H/
CH2C12. The combined organic layer was washed with brine, dried over Na2SO4 and concentrated to obtain racemic AA-rac (110 g, 40%) as an off white solid. Two more batches were repeated and obtained 125 g racemic AA-rac. All batches were combined to obtain racemic AA-rac (230 g) as an off white solid. AA-rac (200 g) was purified by chiral HPLC
purification to obtain AA-1 (94 g) as a white solid and AA-2 (92 g) as a white solid.
AA-1: 1H NMR (500 MHz, DMS0-(16) 6 7.56 (br s, 1H), 7.17 (d, J= 8.7 Hz, 2H), 6.93 (d, J=
8.7 Hz, 2H), 4.32-4.18 (m, 2H), 3.74 (s, 3H), 3.35-3.25 (m, 1H), 3.19-3.10 (m, 1H), 3.07 (d, J=
5.2 Hz, 1H), 2.98 (d, Jr 5.8 Hz, 1H), 2.36 (s, 2H), 1.94-1.80 (m, 2H). LCMS
(ESI): m/z 275.2 [M++1]. HPLC: 99.88%. Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, 3.5tun); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H
(50:50); A:B
:: 60:40; Flow rate: 1.0 mL/min; Retention time: 13.840.
AA-2: 111 NMR (500 MHz, DMSO-d6) 6 7.56 (br s, 1H), 7.17 (d, J= 8.1 Hz, 2H), 6.93 (d, J=
8.7 Hz, 2H), 4.31-4.19 (m, 2H), 3.74 (s, 3H), 3.35-3.26 (m, 1H), 3.18-3.10 (m, 1H), 3.07 (d, Jr 5.2 Hz, 111), 2.98 (d, J= 5.8 Hz, 1H), 2.36 (s, 2H), 1.96-1.80 (m, 2H). LCMS
(ESI): m/z 275.2 [M++1]. HPLC: 99.42%. Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, 3.5m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (50:50);
A:B
:: 60:40; Flow rate: 1.0 mL/min; Retention time: 15.543.
Date recue/Date received 2023-03-06
To a solution of 4-methoxy benzyl amine (750 g, 5.47 mol) in THF (4.5 L) was added FBA (1.1 Kg, 10.9 mol) and 2-bromoacetonitrile (788 g, 6.59 mol) at 0 C and stirred for 16 h under nitrogen atmosphere. After consumption of the starting material (by TLC), the reaction was quenched with water (2 L) and extracted with Et0Ac (2 x 1.5 L). The combined organic layer was dried over Na2SO4 and concentrated under reduced pressure to obtain crude compound which was purified by column chromatography by eluting with 40%
Et0Ac/n-hexane to afford Int-A (675 g, 70% yield with 96% purity by HPLC) as a liquid.
(500 MHz, DMSO-d6) 5 7.21 (d, J= 9.0 Hz, 2H), 6.86 (d, J= 9.0 Hz, 2H), 3.78 (s, 3H), 3.72 (s, 2H), 3.56 (s, 2H), 2.93 (br s, 2H). LCMS (m/z): 177.1 [W+11.
Synthesis of CI & CJ:
o Step-1 '__\)_4) Step-2 EINID Step-3 Step-4 ' HN HN N¨PMB
¨ OH Pri(OH)2 OH DCCµ Me H OMe Int-A NaH, Mel RT, 18 h RI, 18h LiHMDS 0 SM1 1 2 AA-Rae Chiral Separation ¨¨)cN¨PMB ¨N N¨PMB + ¨N N¨PMB
Synthesis of 2-(4-methoxybenzyl)-2,7-diazaspiro[3.5]nonane-1,6-dione (AA-rac):
The experimental procedure for the synthesis AA-rac has been captured under AA-rac, AA-1 & AA-2.
Synthesis of 2-(4-methoxybenzyI)-7-methyl-2,7-diazaspiro[3.5]nonane-1,6-dione (CI &
CJ):
To a suspension of Nall (60% in mineral oil, 262 mg, 10.94 mmol) in DMF (10 mL) was added AA-rac (1.5 g, 5.47 mmol) in DMF (5 mL) at 0 C under nitrogen atmosphere and stirred for 10 minutes. Methyl iodide (0.45 mL, 7.11 mmol) was added to the reaction mixture and continued stirring at room temperature for 16 h. After consumption of the starting material (by TLC), water (50 mL) was added extracted with CH2C12 (2 x 200 mL). The combined organic layer was dried over Na2SO4 and concentrated to obtain crude compound which was purified by column chromatography by eluting 3% Me0H/ CH2C12 to afford racemic compound 3 (1.2 g, 76%) as pale yellow solid. The racemic compound 3 was resolved by chiral Date recue/Date received 2023-03-06
(440 mg) as a white solid.
CI: 111 NMR (400 MHz, DMSO-d6) 6 7.17 (d, J= 8.7 Hz, 2H), 6.92 (d, J= 8.7 Hz, 2H), 4.32-4.20 (m, 2H), 3.74 (s, 3H), 3.45-3.35 (m, 1H), 3.30-3.22 (m, 1H), 3.08 (d, J=
5.6 Hz, 1H), 2.98 (d, J 5.6 Hz, 1H), 2.79 (s, 3H), 2.43 (s, 2H), 2.06-1.89 (m, 2H). LCMS (ESI):
m/z 289.1 [M++11. HPLC: 97.14%. Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, 5um); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (50:50);
A:B
55:45; Flow rate: 1.0 mL/min; Retention time: 11.685.
CJ: 1H N1VIR (400 MHz, DMSO-d6) 6 7.17 (d, J= 8.8 Hz, 2H), 6.92 (d, J= 8.7 Hz, 2H), 4.31-4.19 (m, 2H), 3.74 (s, 3H), 3.44-3.37 (m, 1H), 3.30-3.23 (m, 1H), 3.08 (d, J=
5.6 Hz, 1H), 2.98 (d, J = 5.6 Hz, 1H), 2.79 (s, 3H), 2.43 (s, 2H), 2.04-1.90 (m, 2H). LCMS
(ESI): m/z 289.1 [M++1]. HPLC: 99.91%. Chiral HPLC: 100.00%; Column: CHIRALPAK IC (250*4.6 mm, 51.im); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H
(50:50); A:B
55:45; Flow rate: 1.0 mL/min; Retention time: 21.608.
Synthesis of CK & CL:
HN OH
Step-1 Step-2 b.__13 S(ep-3 1;:\ Step-4 HN HN
OH DCC, Me0H ome It-A HN\ )cN-PMB
(z) OH Pd(OH)2 NaH, EtBr RT, 18h RI, 18 h LIHMDS 0 SM1 1 2 AA-rac SeCpal7aat!on rN N-PMB . rN\ifN-PMB + rN )cN-PMB
Synthesis of 2-(4-methoxybenzy1)-2,7-diazaspiro[3.5]n0nane-1,6-dione (AA-rac):
The experimental procedure for the synthesis of AA-rac has been captured under AA-rac, AA-1 & AA-2.
Synthesis of 7-ethyl-2-(4-methoxybenzy1)-2,7-diazaspiro [3.5]n onane-1,6-dione (CK &
CL):
To a suspension of NaH (60% in mineral oil, 350 mg, 7.28 mmol) in DMF (7 mL) was added AA-rac (1 g, 3.64 mmol) in DMF (3 mL) at 0 C under nitrogen atmosphere and stirred for at room temperature 10 minutes. Again reaction mixture was cooled to 0 C, ethyl bromide (0.42 mL, 5.83 mmol) was added to the reaction mixture and continued stirring at room temperature for 16 h. After consumption of the starting material (by TLC), water (50 mL) was Date recue/Date received 2023-03-06
The racemic compound 3 was resolved by chiral preparative HPLC to obtain CK
(250 mg) as a thick syrup and CL (275 mg) as a thick syrup.
CK: 11-1 NAIR (400 MHz, CD30D-d4) 8 7.19 (d, J= 8.8 Hz, 2H), 6.92 (d, J= 8.8 Hz, 2H), 4.39-4.25 (m, 2H), 3.79 (s, 3H), 3.62-3.56 (m, 1H), 3.49-3.33 (m, 3H), 3.16 (d, J= 5.9 Hz, 1H), 3.07 (d, J= 5.9 Hz, 1H), 2.65-2.50 (m, 2H), 2.18-2.09 (m, 1H), 2.08-1.98 (m, 1H), 1.12 (t, J-7.2 Hz, 3H). LCMS (ESI): m/z 303.9 [M+-I-1]. HPLC: 99.55%. Chiral HPLC:
100.00%.
Column: CHIRALPAK IC (250*4.6 mm, 5um); Mobile Phase A: 0.1% DEA in n-hexane;
Mobile Phase B: DCM:Me0H (50:50); A:B 55:45; Flow rate: 1.0 mL/min; Retention time:
10.984.
CL: 111 NMR (400 MHz, METHANOL-d4) 8 7.19 (d, J= 8.7 Hz, 2H), 6.92 (d, J= 8.8 Hz, 2H), 4.38-4.27 (m, 2H), 3.79 (s, 3H), 3.61-3.57 (m, 1H), 3.49-3.34 (m, 3H), 3.16 (d, J= 5.9 Hz, 1H), 3.07 (d, J= 5.9 Hz, 1H), 2.67-2.49 (m, 2H), 2.18-2.08 (m, 1H), 2.08-1.99 (m, 1H), 1.12 (t, J= 7.2 Hz, 3H). LCMS (ES!): m/z 303.9 [M++1]. HPLC: 99.20%. Chiral HPLC:
100.00%.
Column: CHIRALPAK IC (250*4.6 mm, 51.1m); Mobile Phase A: 0.1% DEA in n-hexane;
Mobile Phase B: DCM:Me0H (50:50); A:B :: 55:45; Flow rate: 1.0 mUmin;
Retention time:
14.849.
Synthesis of CS & CT:
FiNb\kE, o step-1 FINci Step-2 HN .. 0 .. Step-3 HN N¨PMB SteP 4 ¨ OH Pd(OH)2 0H DCC, Me0H
OMe Int-A NaH
(z) RT, 18 h RT, 18 h 1_11-1MDS 0 Chiral 0 0 )cN¨PMB
Separation N
0 N¨PMB N¨PMB
Synthesis of 2-(4-methoxybenzy1)-2,7-diazaspiro[3.51nonane-1,6-dione (AA-rac):
The experimental procedure for the synthesis AA-rac has been captured under AA-rac, AA-1 & AA-2.
Synthesis of 7-isobuty1-2-(4-methoxybenzy1)-2,7-diazaspiro[3.5]nonane-1,6-dione (CS &
CT):
Date recue/Date received 2023-03-06
purification to obtain CS (230 mg) as white solid and CT (275 mg) as white solid.
CS: 1H NMR (400 MHz, CD30D) 6 7.23-7.16 (m, 2H), 6.96-6.90 (m, 2H), 4.32 (d, J= 2.0 Hz, 2H), 3.79 (s, 3H), 3.66-.3.54 (m, 1H), 3.37-3.32 (m, 1H), 3.28-3.24 (m, 1H), 3.22-3.12 (m, 2H), 3.07 (d, J= 5.8 Hz, 1H), 2.69-2.51 (m, 2H), 2.20-1.94 (m, 3H), 0.90 (t, J= 6.3 Hz, 6H).
LCMS (ES!): miz 331.3 [M++11. HPLC: 99.16%. Chiral HPLC: 100.00%. Column:
CHIRALPAK IC (250*4.6 mm, 51.1m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (50:50); A:B 55:45; Flow rate: 1.0 mL/min; Retention time: 8.215.
CT: 1H NMR (400 MHz, CD30D) 6 7.24-7.14 (m, 2H), 6.97-6.85 (m, 2H), 4.32 (d, J= 2.3 Hz, 2H), 3.79 (s, 3H), 3.64-3.53 (m, 1H), 3.38-3.33 (m, 1H), 3.28-3.23 (m, 1H), 3.21-3.12 (m, 2H), 3.07 (cl, Jr 5.8 Hz, 1H), 2.70-2.51 (m, 2H), 2.20-1.93 (m, 3H), 0.90 (t, J= 6.3 Hz, 6H).
LCMS (ES!): m/z 331.2 [M++1]. HPLC: 99.81%. Chiral HPLC: 100.00%. Column:
CHIRALPAK IC (250*4.6 mm, 5iim); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (50:50); A:B 55:45; Flow rate: 1.0 mL/min; Retention time: 11.578.
Synthesis of CM & CN:
H J \\(E)E) Step-1 f/3 Step-2 p Step-3 //0 \_;/() OH Pd(OH)2 HN\ OH DOC, MeO'H HN\ Me Lawesson HN\
OMe reagent H N
Step-4 NH2 HN N¨PMB
Int-A Step-A
LiHMDS 0 40 40 CM & CN THE, TEA
Bromoacetonitrile SM2 Int-A
Synthesis of methyl 2-oxopiperidine-4-carboxylate (2):
Date recue/Date received 2023-03-06
Synthesis of methyl 2-thioxopiperidine-4-carboxylate (3):
To a stirred solution of compound 2 (6 g, 38.2 mmol) in toluene (60 mL) was added Lawesson's reagent (7.7 g, 19.1 mmol) under nitrogen atmosphere. The reaction mixture was stirred at 100 C for 2 h. After consumption of the starting material (by TLC), the reaction mixture was cooled to room temperature and concentrated under reduced pressure. The residue was purified by column chromatography by eluting with 40% Et0Ac/n-hexane to obtain compound 3 (3.4 g, 51 %) as a white solid. 111 NMR (500 MHz, DMSO-d6) 6 10.17 (br s, 1H), 3.63 (s, 3H), 3.27-3.21 (m, 2H), 2.95-2.88 (m, 1H), 2.87-2.80 (m, 1H), 2.80-2.72 (m, 1H), 2.05-1.98 (m, 1H), 1.80-1.70 (m, 1H). LCMS (m/z): 174.1 [M++1].
Synthesis of 2-(4-methoxybenzy1)-6-thioxo-2,7-diazaspiro[3.5]nonan-1-one (CM &
CN):
To a stirred solution of compound 3 (3.4 g, 19.6 mmol) in dry THF (30 mL) was added LiHMDS (1.0 M in THF, 39.3 mL, 39.3 mmol) slowly at -78 C under nitrogen atmosphere.
The reaction temperature was raised to -20 C and stirred for 1 h. Int-A (3.5 g, 19.6 mmol) in THF (10 mL) was added drop wise at -78 C. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), the reaction was quenched with ice water (20 mL) and extracted with 10% Me0H/
CH2C12 (2 x 50 mL). The combined organic layer was dried over Na2SO4 and concentrated under reduced pressure. The residue was purified by column chromatography by eluting with 2%
Me0H/
CH2C12 to obtain racemic CM & CN (1.5 g, 26%) as an off white solid. The racemic CM &
CN was resolved by chiral preparative HPLC purification to obtain CM (337 mg) as a white solid and CN (327 mg) as a white solid.
CM: 1H NMR (500 MHz, DMSO-d6) 6 10.21 (br s, 1H), 7.17 (d, J= 8.5 Hz, 2H), 6.93 (d, J-8.5 Hz, 2H), 4.25 (s, 2H), 3.74 (s, 3H), 3.44 - 3.35 (m, 1H), 3.31 (s, 2H), 3.29 - 3.23 (m, 1H), 3.06 (d, J= 5.8 Hz, 1H), 2.97 (d, J= 5.8 Hz, 1H), 2.89 (d, J= 6.2 Hz, 2H), 2.02 - 1.87 (m, 2H) LCMS (ESI): nilz 290.9 [M++11. HPLC: 97.58%. Chiral HPLC: 100.00%. Column:
CHIRALPAK IC (250*4.6 mm, 3.511m); Mobile Phase A: 0.1% DEA in n-hexane;
Mobile Phase B: DCM:Et0H (60:40); A:B :: 60:40; Flow rate: 1.0 mL/min; Retention time: 10.287.
CN: 1H NMR (500 MHz, DMSO-d6) 6 = 10.21 (br s, 1H), 7.17 (cl, J= 8.5 Hz, 2H), 6.93 (d, J
= 8.5 Hz, 2H), 4.25 (s, 2H), 3.74 (s, 3H), 3.44 - 3.36 (m, 1H), 3.30 - 3.23 (m, 1H), 3.06 (d, J=
5.7 Hz, 1H), 2.97 (d, Jr 5.7 Hz, 1H), 2.94 - 2.83 (m, 2H), 2.02 - 1.86 (m, 2H). LCMS (ESI):
Date recue/Date received 2023-03-06
(250*4.6 mm, 3.5 m); Mobile Phase A:0.1% DEA in n-hexane; Mobile Phase B:
DCM:Et0H
(60:40). A:B :: 60:40; Flow rate: 1.0 mL/min; Retention time: 12.201.
Preparation of It-A: Synthesis of 2((4-methoxybenzypamino)acetonitrile (Int-A):
The experimental procedure for the synthesis Int-A has been captured under AA-rac, AA-1 & AA-2 (as It-A).
Synthesis of CO CP, CO & CR:
o 0 o o HNbT4) Step-1 b4 Step-2 Step-3 Step-4 HN ' b4 HN )N-PMB --\
Lawessons Pd(OH)2 DCC, Me0H HN Int-A
OH OMe LIHMDS 0 reagent SM1 1 2 AA-rac hc , H .,N
HN N-PMB + HN N-PMB NH2 S S Step-A
CO CO
40 THE, TEA, 10 CP CR
Bromoacetonitrile _ 0 (t) , SM2 Int-A
Synthesis of 2-(4-methoxybenzyl)-2,7-diazaspiro[3.5]n0nane-1,6-dione (AA-rac):
The experimental procedure for the synthesis AA-rac has been captured under the synthesis of AA-rac, AA-1 & AA-2.
Synthesis of 2-(4-methoxybenzyI)-2,7-diazaspiro[3.5]n0nane-1,6-dithione (CO &
CP):
To a stirred solution of AA-rac (5 g, 18.2 mmol) in toluene (50 mL) was added Lawesson's reagent (7.3 g, 18.1 mmol) under nitrogen atmosphere. The reaction mixture was heated to reflux for 2 h. After consumption of the starting material (by TLC), the reaction mixture was cooled to room temperature and concentrated under reduced pressure. The residue was purified by CombiFlash chromatography to obtain mixture of CO & CP (1.5 g, 27%) as a white solid and CQ & CR (450 mg, 9%) as a white solid. Racemic mixture of CO
and CP (1.5 g, 27 %) was separated by chiral preparative HPLC purification to obtain CO
(183 mg) as a white solid and of CP (166 mg) as a white solid.
CO: 1H NMR (500 MHz, DMSO-d6) 8 10.24 (br s, 1H), 7.24 (d, J= 8.5 Hz, 2H), 6.95 (d, J=
8.5 Hz, 2H), 4.66-4.52 (m, 2H), 3.75 (s, 3H), 3.64 (d, J = 7.7 Hz, 1H), 3.58 (d, J= 7.7 Hz, 1H), 3.56-3.52 (m, 1H), 3.29-3.23 (m, 1H), 2.85 (d, J = 1.7 Hz, 2H), 1.96-1.81 (m, 2H). LCMS
(EST): m/z 307.9 [M++1]. HPLC: 97.51%. Chiral HPLC: 100.00%. Column: CHIRALPAK
IC
Date recue/Date received 2023-03-06
DCM:IPA
(60:40); A:B 65:35; Flow rate: 1.0 mL/min; Retention time: 12.651.
CP: 113 NMR (500 MHz, DMSO-d6) 6 10.24 (br s, 1H), 7.24 (d, J= 8.4 Hz, 2H), 6.95 (d, J=
8.4 Hz, 2H), 4.66-4.51 (m, 2H), 3.75 (s, 3H), 3.64 (d, J=7.7 Hz, 1H), 3.58 (d, J= 7.7 Hz, 1H), 3.55-3.51 (m, 1H), 3.29-3.22 (m, 1H), 2.85 (s, 2H), 1.97-1.81 (m, 2H). LCMS
(ESI): m/z 307.9 [M++11. HPLC: 99.25%. Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, 3.5ttm); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:IPA
(60:40). A:B
65:35; Flow rate: 1.0 mL/min; Retention time: 15.825.
Preparation of Int-A: Synthesis of 2-((4-methoxybenzyl)amino)acetonitrile (Int-A):
The experimental procedure for the synthesis Int-A has been captured under AA-rac, AA-1 & AA-2 (as It-A).
Synthesis of CU & CV:
/9 Step-1 0 Step-2 0 Step-3 HN H 1µ1) N¨Bn ¨ OH Pd(OH)2 HN\ DMS, THF HN\
OH OMe Int-A
(z) RI, 18 h RT, 48 h LiHMDS 0 SM1 1 2 Cu CV
H
Step-A
THF, TEA, Bromoacetonitrile SM2 Int-A
Synthesis of methyl 2-oxopiperidine-4-carboxylate (2):
The experimental procedure for the synthesis of compound 2 has been captured under the synthesis of AA-rac, AA-1 & AA-2 (as compound 2).
Synthesis of 2-benzy1-2,7-diazaspiro[3.5]nonane-1,6-dione (CU & CV):
To a stirred solution of compound 2 (3.5 g, 0.022 mol) in dry THF (40 mL) was added LiHMDS (1.0 M in THF, 44 mL, 0.044 mol) slowly at -78 C under nitrogen atmosphere. The reaction temperature was raised to -20 C and stirred for 1 h. Int-A (3.2 g, 0.022 mol) in THF
(10 mL) was added drop wise at -78 C. The reaction mixture was brought to room temperature and stirred for 5 h. After consumption of the starting material (by TLC), the reaction mixture was cooled to 0 C. Reaction mixture was quenched with ice water and extracted with Et0Ac (2 x 50 mL). The combined organic layer was dried over Na2SO4 and concentrated to obtain Date recue/Date received 2023-03-06
CU: 1H NMR (400 MHz, DMSO-d6) 6 7.57 (br s, 1H), 7.41-7.34 (m, 2H), 7.33-7.22 (m, 3H), 4.40-4.27 (m, 211), 3.30 - 3.27 (m, 1H), 3.20 - 3.14 (m, 1H), 3.12 (d, J= 5.6 Hz, 1H), 3.03 (d, J
= 5.6 Hz, 1H), 2.38 (s, 2H), 1.98 - 1.82 (m, 2H). LCMS (ESI): m/z 245.0 [M++1]. HPLC:
97.50%; Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, 5i,tm); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B 65:35;
Flow rate: 1.0 mL/min; Retention time: 12.219.
CV: 1H NMR (400 MHz, DMSO-d6) 6 7.57 (br s, 111), 7.41-7.34 (m, 211), 7.32-7.22 (m, 311), 4.40-4.26 (m, 2H), 3.30-3.27 (m, 1H), 3.19-3.14 (m, 1H), 3.12 (d, J= 5.6 Hz, 1H), 3.03 (d, J =
5.6 Hz, 1H), 2.38 (s, 2H), 1.99 - 1.81 (m, 2H). LCMS (ESI): m/z 245.0 [M++1].
HPLC:
99.76%. Chiral HPLC: 98.55%. Column: CHIRALPAK IC (250*4.6 mm, 511m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B 65:35;
Flow rate: 1.0 mL/min; Retention time: 14.153.
Synthesis of 2-(benzylamino)acetonitrile (Int-A):
To a solution of benzyl amine (SM2) (10 g, 0.093 mot) in THF (60 mL) was added triethylamine (26 mi., 0.186 mol) and stirred for 10 minutes under nitrogen atmosphere. 2-bromoacetonitrile (8 mL, 0.112 mol) was added slowly at 0 C and stined at room temperature for 16 h. After consumption of the starting material (by TLC), the reaction was quenched with ice water (100 mL) and extracted with Et0Ac (2 x 500 mL). The combined organic layer was washed brine, dried over Na2SO4 and concentrated to obtain crude compound which was purified by column chromatography by eluting 30% Et0Ac/ n-hexane to afford Int-A (3.5 g, 26%) as a liquid. 111NMR (400 MHz, DMSO-d6) 6 7.36-7.30 (m, 4H), 7.29-7.22 (m, 111), 3.75 (d, J= 5.9 Hz, 2H), 3.57 (d, J= 7.3 Hz, 2H), 3.03 (quin, J = 6.5 Hz, 1H). LCMS
(m/z): 147.1 [-WA].
Synthesis of CW & CX:
Date recue/Date received 2023-03-06
, (E) o Step-1 HI\I Step-2 0 Step-3 .
--)¨ V HN )c N-Bn \
¨17) OH Pd(OH)2 OH DMS, THF HN
OMe Int-A
RI, 18 h RT, 48h LiHMDS o smi 1 2 Cu CV
0 e Step-4 - ¨NhcN-Bn NH2 Mel Step-A
.1 TEA, , CW THE, lal CX Bromoacetonitrile SM2 Int-A
, Date recue/Date received 2023-03-06
The experimental procedure for the synthesis of a racemic mixture of CU & CV
has been captured under CU & CV.
Synthesis of 2-benzy1-7-methyl-2,7-diazaspiro[3.5]nonane-1,6-dione (CW & CX):
To a suspension of NaH (60% in mineral oil, 820 mg, 20.4 mmol) in DMF (12 mL) was added racemic CU & CV (2 g, 8.19 mmol) in DMF (3 mL) at 0 C under nitrogen atmosphere and stirred for at room temperature 1 h. Again reaction mixture was cooled to 0 C, methyl iodide (1.5 mL, 24.6 mmol) was added to the reaction mixture and continued stirring at room temperature for 16 h. After consumption of the starting material (by TLC), water (12 mL) was added extracted with Et0Ac (2x500 mL). The combined organic layer was dried over Na2SO4 and concentrated to obtain crude compound which was purified by column chromatography by eluting 5% Me0H/ CH2C12 to afford mixture of CW & CX (1.5 g) as thick syrup, which was purified by reverse phase preparative HPLC purification to obtain mixture CW &
CX (460 mg). This was separated by chiral preparative HPLC purification to obtain CW
(137 mg) as semi solid and CX (159 mg) as thick syrup.
CW: 1H NMR (400 MHz, DMSO-d6) 6 7.41-7.22 (m, 5H), 4.40-4.26 (m, 2H), 3.46-3.36 (m, 1H), 3.31-3.25 (m, 1H), 3.13 (d, J= 5.6 Hz, 1H), 3.02 (d, J= 5.6 Hz, 1H), 2.80 (s, 3H), 2.46 (s, 2H), 2.08-1.91 (m, 2H). LCMS (ESI): m/z 258.9 [M++1]. HPLC: 99.58%. Chiral HPLC:
100.00%. Column: CHIRALPAK IC (250*4.6 mm, 51.1m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B :: 60:40; Flow rate: 1.0 mL/min;
Retention time: 11.305.
CX: 1H NMR (400 MHz, DMSO-d6) 6 7.41-7.21 (m, 5H), 4.39-4.25 (m, 211), 3.47-3.37 (m, 1H), 3.31-3.25 (m, 1H), 3.13 (d, J= 5.6 Hz, 1H), 3.02 (d, J= 5.6 Hz, 1H), 2.80 (s, 3H), 2.46 (s, 2H), 2.09-1.91 (m, 2H). LCMS (ESI): m/z 259.1 [M++1]. HPLC: 99.76%. Chiral HPLC:
98.04%. Column: CHIRALPAK IC (250*4.6 mm, 5 m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B :: 60:40; Flow rate: 1.0 mL/min;
Retention time: 22.235.
Preparation of Int-A:
Synthesis of 2-(benzylamino)acetonitrile (Int-A):
The experimental procedure for the synthesis racemic mixture of Int-A has been captured under CU & CV.
Date recue/Date received 2023-03-06
o step-, o Step-2 0 0 Step-3 Step-4 HN HN j me Dcc me-H HN N¨Bn (Z) OH Pd(OH)2 Ethyl brom RT, 18h RT 18h ide \o nt-A
LIHMDS 0 NaH
CV
/---NhcN¨Bn H ,N
CY Step-A io CZ THF, TEA, Bromoacetonitrile SM2 Int-A
Synthesis of 2-benzy1-2,7-diazaspiro[3.5]nonane-1,6-dione (CU & CV):
The experimental procedure for the synthesis of a racemic mixture of CU & CV
has been captured under CU & CV.
Synthesis of 2-benzy1-7-ethyl-2,7-diazaspirop.51nonane-1,6-dione (CY & CZ):
To a suspension of NaH (60% in mineral oil, 820 mg, 20.4 mmol) in DMF (8 mL) was added racemic CU & CV (2 g, 8.19 mmol) in DMF (2 mL) at 0 C under nitrogen atmosphere and stirred for at room temperature 1 h. Again reaction mixture was cooled to 0 C, ethyl bromide (0.9 mL, 13.1 mmol) was added to the reaction mixture and continued stirring at room temperature for 16 h. After consumption of the starting material (by TLC), water (12 mL) was added extracted with Et0Ac (2x500 mL). The combined organic layer was dried over Na2SO4 and concentrated to obtain crude compound which was purified by column chromatography by eluting 2% Me0H/ CH2C12 to afford mixture of CY & CZ (1.5 g, 67%) as off white solid, which was separated by chiral preparative HPLC purification to obtain CY (489 mg) as white solid and CZ (443 mg) as white solid.
CY: 1H NMR (400 MHz, DMSO-d6) 6 7.41-7.34 (m, 2H), 7.32-7.22 (m, 3H), 4.39-4.27 (m, 2H), 3.49-3.39 (m, 1H), 3.31-3.24 (m, 3H), 3.13 (d, J= 5.6 Hz, 1H), 3.02 (d, J= 5.5 Hz, 1H), 2.45 (s, 2H), 2.07-1.90 (m, 2H), 1.00 (t, J = 7.2 Hz, 3H). LCMS (ES!): m/z 272.9 [M++1].
HPLC: 95.23%. Chiral HPLC: 98.54%. Column: CHIRALPAK IC (250*4.6 mm, 5 m).
Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B
65:35;
Flow rate: 1.0 mL/min; Retention time: 13.281.
CZ: 1H NMR (400 MHz, DMSO-d6) 6 7.42-7.34 (m, 2H), 7.33-7.22 (m, 3H), 4.39-4.27 (m, 2H), 3.48-3.39 (m, 1H), 3.30-3.24 (m, 3H), 3.13 (d, J = 5.6 Hz, 1H), 3.02 (d, J = 5.6 Hz, 1H), Date recue/Date received 2023-03-06
HPLC: 99.40%. Chiral HPLC: 99.59%. Column: CHIRALPAK IC (250*4.6 mm, 511,m).
Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (10:90); A:B ::
65:35;
Flow rate: 1.0 mL/min; Retention time: 21.461.
Preparation of Int-A:
Synthesis of 2-(lbenzylamino)acetonitrile (Int-A):
The experimental procedure for the synthesis racemic mixture of Int-A has been captured under CU & CV.
Synthesis of CA & CB:
0 0 0 0 Bn0 HNb, OH Step-1 OH Step-2 b__0-Step-3 0- Step-4 ¨\K HN HN HN
¨ 0 Pd(OH)2 43 OGG, Me0H 0 LIHMDS
BOMCI
0 Bn0 0 HO HN HN b:\:;1-.1Ei 0 Step-6 OBn OH 5teP-5 b2i0H Step-7 . Int-D, HATU N'' OBn DIAD, PPh3 HthcN== ...0Bn 0 0 0 0 if OH
Step-8 HNbcN Step-9 HN ,N... NH
.= =
.-' ...OH
Pd/c -.OH
BnNH,,HATU
CA
CB
HOõ,4 )_ -0H Step-A
HO_)\-OH Step-B
Bn02_2\-OH Step-C Bn0-0Bn Step-ID BnOv i-OBn NH2 (B0)20 NHBoc NaH,BnBr NHBoc K2CO3,BnBr NHBoc Ether.HCI / µIVH2 HCI II
Synthesis of methyl 2-oxopiperidine-4-carboxylate (2):
The experimental procedure for the synthesis compound 2 has been captured under the synthesis of AA-rac, AA-1 & AA-2 (as compound 2).
Synthesis of methyl 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylate (3):
To a stirring solution of compound 2 (30 g, 0.191 mol) in THF (300 mL) was added LiHMDS (1M in THF, 764 mL, 0.764 mol) at -78 C under nitrogen atmosphere. The reaction mixture was allowed to warm to -30 C and stirred for 1 h. The reaction mixture was cooled to -78 C and BOM-C1 (44.7 g, 0.286 mol) was added. The reaction mixture was allowed to stir at -78 C for 30 minutes, brought to room temperature and continued stirring for 16 h. After consumption of the starting material (by TLC), reaction mixture was cooled to 0 C, quenched Date recue/Date received 2023-03-06
17.0 Hz, 1H), 2.15 (d, J= 17.0 Hz, 1H), 1.92-1.83 (m, 1H), 1.81-1.73 (m, 1H). LCMS (ESI):
m/z 277.9 [M++1].
Synthesis of 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylic acid (4):
To a stirring solution of 3 (22 g, 0.079 mol) in THF, Me0H and H20 (300 mL, 4:1:1), Li0H.H20 (16.6 g, 0.397 mol) was added at room temperature and stirred for 16 h. After consumption of the starting material (by TLC), the reaction mixture was diluted with water (500 mL) extracted with Et20 (2 x 1 L). Aqueous layer was cooled to 0 C and pH-2 was adjusted with citric acid. Solid material was filtered and dried under vacuum to afford 4 (14 g, 67%) as an off white solid. 1H NMR (500 MHz, DMSO-d6) 6 7.37 (br s, 1H), 7.35-7.23 (m, 5H), 4.46 (s, 2H), 3.57 (d, J= 8.8 Hz, 1H), 3.43 (br d, J= 8.8 Hz, 1H), 3.17-3.04 (m, 1H), 3.06-2.98 (m, 1H), 2.53 (s, 1H), 2.08 (d, J= 17.6 Hz, 1H), 1.86-1.81 (m, 1H), 1.77-1.66 (m, 1H).
LCMS (ESI): m/z 264.0 [M++1].
Synthesis of 4-(hydroxymethyl)-2-oxopiperidine-4-carboxylic acid (5):
To a stirring solution of crude compound 4 (14 g, 0.053 mol) in Me0H (400 mL) was added 10% Pd/C (50% wet, 7 g) at room temperature and stirred under H2 atmosphere (balloon pressure) for 16 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and the pad was washed with Me0H (500 mL). Obtained filtrate was concentrated under reduced pressure. The crude material was triturated with Et20 and dried under vacuum to afford compound 5 (6 g, 65%) as an off white solid.
1H NMR (400 MHz, DMSO-do) 6 7.34 (br s, 1H), 3.51 (d, J= 10.4 Hz, 1H), 3.40 (d, J= 10.4 Hz, 1H), 3.19-3.10 (m, 1H), 3.09-2.98 (m, 1H), 2.48-2.41 (m, 2H), 2.02 (d, J= 17.1 Hz, 1H), 1.87-1.77 (m, 1H), 1.69-1.58 (m, 1H). LCMS (ESI): m/z 174.2 [M++1].
Synthesis of benzyl 0-benzyl-N-(4-(hydroxymethyl)-2-oxopiperidine-4-carbony1)-L-threoninate (6):
To a stirring solution of compound 5 (8 g, 0.046 mol) in CH2C12 (300 mL) were added DIPEA (25.5 mL, 0.138 mol), HATU (26.3 g, 0.069 mol) and It-fl (18.6 g, 0.055 mol) at 0 C
Date recue/Date received 2023-03-06
CH2C12 to obtain compound 6 (10 g, 50%) as a light yellow syrup. 111 NMR (500 MHz, DMSO-d6) 6 8.16-8.12 (m, 1H), 7.39-7.18 (m, 10H), 5.15-5.08 (m, 2H), 4.61-4.47 (m, 2H), 4.32 (d, Jr 11.5 Hz, 1H), 4.15-4.05 (m, 1H), 3.57-3.44 (m, 2H), 3.39-3.36 (m, 1H), 3.21-2.97 (m, 2H), 2.45-2.33 (m, 1H), 2.05-1.98 (m, 1H), 1.92-1.81 (m, 2H), 1.79-1.63 (m, 1H), 1.09 (t, J
= 7.1 Hz, 3H). LCMS (m/z): 455.2 [M++11.
Synthesis of benzyl (2S,3R)-3-(benzyloxy)-2-(1,6-dioxo-2,7-diazaspirop.5inonan-yl)butanoate (7):
To a solution of PPh3 (11.54 g, 0.044 mol) and DIAD (8.65 mL, 0.044 mol) in THF
(200 mL) was stirred at room temperature under nitrogen atmosphere for 20 minutes. Then compound 6 (10 g, 0.022 mol) was added to the reaction mixture and allowed to stir 16 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice and concentrated under reduced pressure. Obtained crude material was purified by silica gel column chromatography eluting 2% Me0H/ CH2C12 to afford compound 7 (8 g, 83%) as an off white solid. 1H NMR (500 MHz, DMSO-d6) 6 7.66-7.60 (m, 2H), 7.58-7.52 (m, 3H), 7.43-7.37 (m, 2H), 7.35 -7.23 (m, 3H), 7.20 (br d, J= 7.1 Hz, 1H), 5.24-5.11 (m, 2H), 4.64-4.53 (m, 2H), 4.27 (d, J= 12.1 Hz, 1H), 4.22-.416 (m, 1H), 3.53 (d, J= 5.5 Hz, 1H), 3.47-3.41 (m, 1H), 3.35 (br d, J= 4.9 Hz, 1H), 3.26 (br d, J= 5.5 Hz, 1H), 2.46-2.29 (m, 2H), 1.96-1.77 (m, 2H), 1.07 (d, J= 5.9 Hz, 3H). LCMS (ES!): m/z 437.2 [M++1].
Synthesis of (2S,3R)-2-(1,6-dioxo-2,7-diazaspiro13.51nonan-2-y1)-3-hydroxybutanoic acid (8):
To a stirring solution of crude compound 7 (8 g, 0.018 mol) in Me0H (500 mL) was added 10% Pd/C (50% wet, 5 g) at room temperature and stirred under H2 atmosphere (balloon pressure) for 16 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and the pad was washed with Me0H (500 mL). Obtained filtrate was concentrated under reduced pressure. The crude material was triturated with Et20 and dried under vacuum to afford compound 8 (3 g, 65%) as an off white solid.
111 NMR (400 MHz, DMSO-d6) 6 12.87 (br s, 1H), 7.59 (br s, 1H), 4.86-4.72 (m, 1H), 4.63-4.56 (m, 1H), Date recue/Date received 2023-03-06
LCMS (ES!):
m/z 255.0 [M++1].
Synthesis of (2S,3R)-N-benzy1-2-(1,6-dioxo-2,7-diazaspirop.5inonan-2-y1)-3-hydroxybutanamide (CA & CB):
To a stirring solution of compound 8 (1.5 g, 5.85 mmol) in CH2C12 (150 mL) were added DIPEA (3 mL, 17.4 mmol), HATU (3.3 g, 8.68 mmol) and benzylamine (752 mg, 7.02 mmol) at 0 C under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), reaction mixture was concentrated under reduced pressure to afford crude compound which was purified by column chromatography by eluting 5% Me0H/ CH2C12 to obtain racemic CA & CB
(1.55 g,) as a white solid and was separated by chiral HPLC purification to obtain CA (300 mg) as white solid and CB (300 mg) as a white solid.
CA: 113 NMIR (400 MHz, DMSO-d6) 8 8.62 (br t, J= 5.9 Hz, 1H), 7.56 (br s, 1H), 7.36-7.28 (m, 2H), 7.26-7.20 (m, 3H), 4.99 (br d, J= 4.2 Hz, 1H), 4.28 (d, J= 5.8 Hz, 2H), 4.08-3.94 (m, 2H), 3.44 (d, J= 5.9 Hz, 1H), 3.34-3.32 (m, 1H), 3.30-3.28 (m, 1H), 3.24-3.10 (m, 1H), 2.39-2.26 (m, 2H), 1.97-1.88 (m, 2H), 1.05 (d, J= 5.8 Hz, 3H). LCMS (ES!): m/z 346.0 [Nil-LEI].
HPLC: 96.16%. Chiral HPLC: 95.45%. Column: CHIRALPAK IC (250*4.6 mm, 5tim);
Mobile Phase B: DCM:Et0H:IPA (90:05:05 &0.1% DEA); Flow rate: 1.0 mL/min;
Retention time: 7.971.
CB: '11NMR (400 MHz, DMSO-d6) 8 8.63 (br t, J= 5.8 Hz, 1H), 7.55 (s, 1H), 7.34-7.28 (m, 2H), 7.27-7.21 (m, 3H), 5.02 (br s, 1H), 4.34-4.21 (m, 2H), 4.05-3.93 (m, 2H), 3.39 (s, 1H), 3.33 (br s, 1H), 3.29-3.26 (m, 1H), 3.21-3.11 (m, 1H), 2.44-2.32 (m, 2H), 1.94-1.80 (m, 2H), 1.04 (d, J= 6.0 Hz, 3H). LCMS (ESI): m/z 346.1 [M++1]. HPLC: 99.41%. Chiral HPLC:
95.23%. Column: CHIRALPAK IC (250*4.6 mm, 5um); Mobile Phase B: DCM:Et0H:IPA
(90:05:05 &0.1% DEA); Flow rate: 1.0 mL/min; Retention time: 9.413.
Preparation of Int-D:
Synthesis of (tert-butoxycarbonyI)-L-threonine (A):
To a solution of SM-2 (50 g, 0.420 mol) in 1,4-dioxane and water (500 mL, 1:1) was added NaHCO3 (133 g, 1.255 mol) portion wise at RT and stirred for 15 mm. Then Boc20 (144 mL, 0.629 mol) was added drop wise to the reaction mixture and stirring was continued at RT
for 16 h. After consumption of the starting material (by TLC), the reaction mixture was Date recue/Date received 2023-03-06
The combined organic layer was washed with brine (1 x 200 mi.), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford compound A
(80 g, 87%) as a colorless syrup. 1H-NMR (500 MHz, DMSO-d6) 8 12.5 (br s, 1H), 6.30 (d, J=
8.5 Hz, 1H), 4.50 (br s, 1H), 4.05-4.02 (m, 1H), 3.88-3.86 (m, 1H), 1.39 (s, 9H), 1.08 (d, J= 6.0 Hz, 3H).
LCMS (m/z): 218.1 [M+-1].
Synthesis of 0-benzyl-N-(tert-butoxycarbony1)-L-threonine (B):
To a stirring solution of compound A (80 g, 0.365 mol) in DMF (800 mL) was added 60% NaH (22 g, 0.913 mol) portion wise at -20 C under N2 atmosphere and stirred for 2 h.
Benzyl bromide (52 mL, 0.438 mol) drop wise and the reaction mixture was stirred at 0 C for 4 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with ice cold water and extracted with diethyl ether (2 x 500 mL). Aqueous layer acidified by using 1N HCl (pH-2). The aqueous layer was extracted with Et0Ac (2 x 1 L).
Separated organic layer washed with brine solution, dried over anhydrous Na2SO4 and concentrated under reduced pressure to afford compound B (84 g, crude) as a thick syrup. NMR
(500 MHz, DMSO-d6) 8 12.64 (br s, 1H), 7.34-7.25 (m, 5H), 6.46 (d, J= 8.5 Hz, 1H), 4.53 (d, J= 11.5 Hz, 1H), 4.39 (d, J= 12.0 Hz, 1H), 4.00-3.98 (m, 2H), 1.39 (s, 9H), 1.15 (d, J=
6.0 Hz, 3H).
Synthesis of benzyl 0-benzyl-N-(tert-butoxycarbonyl)-L-threoninate (C):
To a stirring solution of compound B (78 g, 0.252 mol) in DMF (780 mL) was added K2CO3 (87 g, 0.631 mol) at RT under N2 atmosphere and stirred for 30 min.
Benzyl bromide (45 mL, 0.378 mol) was added drop wise at RT and the reaction mixture was stirred for 16 h.
The reaction mixture was quenched with water (2 L) and extracted with diethyl ether (2 x 1 L).
The separated organic layer was washed with brine, dried over anhydrous Na2SO4 and concentrated under reduced pressure. The crude material was purified by silica gel column chromatography eluting with 10% Et0Ac/n-hexane to afford compound C (68 g, 68%) as a yellow syrup. 1111 NMR (500 MHz, DMSO-d6) 8 7.37-7.18 (m, 10H), 6.81 (d, J=
9.0 Hz, 1H), 5.08 (s, 2H), 4.49 (d, J= 12.0 Hz, 1H), 4.32 (d, J= 12.0 Hz, 1H), 4.25-4.22 (m, 1H), 4.01-3.98 (m, 1H), 1.38 (s, 9H), 1.15 (d, J= 6.0 Hz, 3H). MS (ES!): m/z 399.4 [M].
Synthesis of benzyl 0-benzyl-L-threoninate hydrochloride (D):
To a solution of compound C (68 g, 0.170 mol) in diethyl ether (500 mL) was added 4N
HC1 in 1,4-dioxane (130 mL, 0.511 mol) and stirred at RT for 16 h. After consumption of the Date recue/Date received 2023-03-06
Obtained solid was filtered off and dried under reduced pressure to afford compound D (50 g, 87%) as a white solid (HC1 salt). 1H NMR (400 MHz, DMSO-d6): 8 8.59 (s, 2H), 7.50-7.25 (m, 10H), 5.23 (d, J= 12.5 Hz, 1H), 5.16 (d, J= 12.5 Hz, 1H), 4.54 (d, J= 12.0 Hz, 1H), 4.36 (d, J= 12.0 Hz, 1H), 4.12-4.09 (m, 1H), 4.09-3.99 (m, 1H), 1.29 (d, J= 6.5 Hz, 3H).
Synthesis of CC & CD:
0 0 0 0 Bn0 Hmb4H Step-1 HN b_(01-1 Step-2 1.1 0¨ Step-3 Fi b40_ Step-4 , ' 0 Pd(OH)2 0 DCC, Me0H 0 LIHMDS 0 LOH
BOMCI
0 Bn0 0 HO H 0 Step-6 N, Step-7 b2i0F1 Ste13-5 b2i0H HN
NyLN HNbcN,.
HN HN Int-C, HATU \ DIAD, PPha =n0H
0 Pd/C, Hz 0 0 'OH 0 CD
"11X, 0 HO NH2 Step-A H0 N'tbz Step-B '''N N-Cbz Step-C .--..N
I I
HO Cbz-CI HO Dimethylamine HO Hz/ Pd-C HO
EDC, HOBt L-Thr A B Int-C
Synthesis of 4-(hydroxymethyl)-2-oxopiperidine-4-carboxylic acid (5):
The experimental procedure for the synthesis compound 5 has been captured under the synthesis of CA & CB (as compound 5).
Synthesis of N-02S,3R)-1-(dimethylamino)-3-hydroxy-l-oxobutan-2-y1)-4-(hydroxymethyl)-2-oxopiperidine-4-carboxamide (6):
To a stifling solution of compound 5 (3 g, 0.017 mol) in CH2C12 (150 mL) were added DIPEA (9 mL, 0.051 mol), HATU (9.8 g, 0.025 mol) and Int-C (2.7 g, 0.019 mol) at 0 C
under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (100 mL) and extracted with CH2C12 (2 x 200 mL). The organic layer was dried over anhydrous Na2SO4 and concentrated under reduced pressure. The residue was purified by column chromatography by eluting 10% Me0H/ CH2C12 to obtain compound 6 (2.2 g, 42%) as a thick syrup. 111 NMR (500 MHz, DMSO-d6) 8 8.30 (d, J= 3.8 Hz, 1H), 7.29-7.34 (m, 1H), 7.13-7.09 (m, 1H), 5.37 (br s, 1H), 4.87 (br s, 1H), 4.75-4.62 (m, 1H), 3.94-3.81 (m, 1H), Date recue/Date received 2023-03-06
Synthesis of (2S,3R)-2-(1,6-dioxo-2,7-diazaspiro[3.5]nonan-2-y1)-3-hydroxy-N,N-dimethylbutanamide (CC & CD):
To a solution of PPh3 (4.78 g, 18.2 mmol) in THF (50 mL) was added DIAD (3.59 mL, 18.2 mmol) at room temperature under nitrogen atmosphere and the reaction mixture was stirred for 20 minutes. Compound 6 (2.2 g, 7.31 mmol) in 1,4-dioxane (20 mL) was added to the reaction mixture and allowed to stir for 16 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice and concentrated under reduced pressure.
Obtained crude material was purified by silica gel column chromatography eluting 5% Me0H/
CH2C12 to afford racemic mixture of CC & CD (1.6 g), and was resolved by reverse phase HPLC purification to obtain CC (105 mg) as a white solid and CD (108 mg) as a white solid.
CC: 1H NMR (400 MHz, D20) 8 4.70 (d, J= 7.2 Hz, 1H), 4.23-4.18 (m, 1H), 3.61 (d, J= 6.3 Hz, 1H), 3.57-3.46 (m, 2H), 3.45-3.37 (m, 1H), 3.16 (s, 3H), 2.97 (s, 3H), 2.65 (d, J= 2.3 Hz, 2H), 2.18-2.10 (m, 2H), 1.22 (d, J= 6.4 Hz, 3H). LCMS (ESI): m/z 284.2 [M++11.
HPLC:
99.41%. Chiral HPLC: 100.00%. Column: CHIRALPAK IC (250*4.6 mm, Slim); Mobile Phase A: DCM; Mobile Phase B: Et0H:IPA (50:50); A:B 85:15; Flow rate: 1.0 mL/min;
Retention time: 6.775.
CD: 1H NMR (400 MHz, D20) 8 4.71 (d, J= 7.0 Hz, 1H), 4.24 (m, 1H), 3.58-3.47 (m, 3H), 3.45-3.36 (m, 1H), 3.18 (s, 3H), 2.98 (s, 3H), 2.71 (d, J= 1.8 Hz, 2H), 2.16-2.02 (m, 2H), 1.22 (d, J= 6.4 Hz, 3H). LCMS (ESI): m/z 284.3 [M++11. HPLC: 98.28%. Chiral HPLC:
100.00%. Column: CHIRALPAK IC (250*4.6 mm, 51.1m); Mobile Phase A: DCM; Mobile Phase B: Et0H:IPA (50:50). A:B 85:15; Flow rate: 1.0 mL/min; Retention time:
10.621.
Date recue/Date received 2023-03-06
Synthesis of ((benzyloxy)carbonyI)-L-threonine (A):
To a solution of L-threonine (20 g, 0.17 mol) in 1,4-dioxane and water (1:1, 200 mL) was added NaOH (27.35 g, 0.683 mol) followed by drop wise addition of CbzCl (50%
solution in toluene, 87 mL, 0.256 mol) at 0 C and stirred at room temperature for 16 h.
The reaction was diluted with cold water (100 mL) and washed with Et0Ac (100 mL). The aqueous layer acidified with 1N HC1 solution and extracted with Et0Ac (3 x 100 mL). The organic layer was washed with brine solution (100 mL) and dried over anhydrous Na2SO4, concentrated under reduced pressure to afford compound A (32 g, 75 %) as a white solid. 11INMR
(400 MHz, DMSO-d6) 8 12.64 (br s, 1H), 7.40 - 7.28 (m, 5H), 6.95 (d, J= 8.9 Hz, 1H), 5.03 (s, 2H), 4.62 -4.53 (m, 1H), 4.12 - 4.00 (m, IH), 3.98 - 3.93 (m, 1H), 1.09 (d, J= 6.4 Hz, 3H). LCMS (ES!):
m/z 254.1 [M++1].
Synthesis of benzyl 02S,3R)-1-(dimethylamino)-3-hydroxy-1-oxobutan-2-Acarbamate (B):
To a solution of A (10 g, 39.52 mmol) in CH2C12 (100 mL) was added HOBt (8 g, 59.23 mmol), EDC.HC1 (11.35 g, 59.23 mmol), dimethylamine hydrochloride (6.44 g, 79.05 mmol) and DIPEA (22 mL, 118.5 mmol) at 0 C under nitrogen atmosphere and stirred at room temperature for 16 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (100 mL) and extracted with DCM (2 x 200 mL). The combined organic layer was washed with brine (50 mL), dried over Na2SO4 and concentrated under reduced pressure. The residue was purified by Combi-Flash chromatography eluting with 60%
Et0Ac/n-hexane to afford compound B (9 g, 81%) as a white solid. 1-11 NMR (400 MHz, DMSO-d6) ö 7.40 - 7.27 (m, 5H), 7.04 (br d, J= 8.4 Hz, 1H), 5.08 - 4.97 (m, 2H), 4.72 (d, J=
5.9 Hz, 1H), 4.41 (dd, J= 5.4, 8.4 Hz, 1H), 3.86-3.78 (m, 1H), 3.07 (s, 3H), 2.83 (s, 3H), 1.03 (d, J= 6.3 Hz, 3H). LCMS (ESI): m/z 281.1 [M++11.
Synthesis of (2S,3R)-2-amino-3-hydroxy-N,N-dimethylbutanamide (Int-C):
To a solution of B (11 g, 39.28 mmol) in Me0H (100 mL), 10% Pd/C (50% wet, 4 g) was added at room temperature and stirred under H2 atmosphere (balloon) for 16 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and washed with Me0H (50 mL). The filtrate was concentrated under reduced pressure to afford Int-C (5 g, 87%) as a white solid. 111 NMR (400 MHz, DMSO-d6) 5 3.57 Date recue/Date received 2023-03-06
Synthesis of DA & DB:
0 o 0 0 MO
OH Step-1 b___1311 Step-2 FINb-o¨ Ste b2io¨ Step-4 Pd(01-)2 HN 0 DMS, K2CO3 0 LIHMDS HN 0 LIOH
THE BOMCI
0 013n 0 0H 0 0 Bn0 0 0 0 b401.1 5tep-5 , N, Step-6 HNNO,, AN,õ, Step-7 0 Int-D, HATU 0 H Pd(OH)2 0 tHH DTAD,PPlis 0 'OH 'OH
DA
DB
HO)XNE12 Step-B. Hp".11X,N'cbz Step-C N`cbz Step-D
H
HO CbzCI HO Methylarnine Ho H2/ Pd-C Ho EDC, HOBt L-Thr B C Inta Synthesis of 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylic acid (4):
The experimental procedure for the synthesis compound 4 has been captured under the synthesis of CA & CB (as compound 4).
Synthesis of 4-((benzyloxy)methyl)-N-42S,3R)-3-hydroxy-1-(methylamino)-1-oxobutan-2-y1)-2-oxopiperidine-4-carboxamide (5):
To a stirring solution of compound 4 (5 g, 0.018 mol) in CH2C12 (100 mL) were added (2S,3R)-2-amino-3-hydroxy-N-methylbutanamide (Int-D, 2.3 g, 0.031 mol), DIPEA
(10.3 mL, 0.079 mol) and HATU (12.1 g, 0.031 mol) at 0 C under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), volatiles were removed under reduced pressure to afford crude compound which was purified by column chromatography by eluting 10% Me011/
CH2C12 to obtain compound 5 ( 6.5 g, 95%) as white solid. 1H NMR (500 MHz, DMSO-d6) 6 7.61-7.46 (m, 2H), 7.44-7.24(m, 6H), 4.87 (dd, J= 5.5, 9.0 Hz, 1H), 4.58-4.47 (m, 2H), 4.22-4.11 (m, 1H), 4.04-3.91 (m, 1H), 3.65-3.48 (m, 2H), 3.13-3.00 (in, 2H), 2.55-2.51 (m, 4H), 2.09-1.97 (m, 2H), 1.84-1.71 (m, 1H), 0.99 (d, Jr 6.3 Hz, 3H). LCMS (m/z): 378.0 [WA].
Synthesis of N-425,3R)-3-hydroxy-1-(methylamino)-1-oxobutan-2-y1)-4-(hydroxymethyl)-2-oxopiperidine-4-carboxamide (6):
To a stirred solution of compound 5 (6 g, 0.015 mol) in Me0H (60 mL), 10% Pd (OH)21C (50% wet, 3 g) was added at room temperature and stirred for 16 h under H2 atmosphere (balloon pressure). After consumption of the starting material (by TLC), the Date recue/Date received 2023-03-06
(400 MHz, DMSO-d6) 6 = 7.65-7.54 (m, 2H), 7.49 (d, J= 8.2 Hz, 1H), 7.34-7.24 (m, 1H), 5.74 (br s, 1H), 4.15-4.05 (m, 2H), 4.04-3.96 (m, 1H), 3.64-3.52 (m, 1H), 3.12-2.99 (m, 2H), 2.58 (d, J= 4.6 Hz, 3H), 2.48-2.40 (m, 1H), 2.08-1.98 (m, 1H), 1.97-1.84 (m, 1H), 1.81-1.62 (m, 1H), 1.01 (d, J= 6.3 Hz, 3H). LCMS (ES!): m/z 286.0 [M+-1].
Synthesis of (2S,3R)-2-(1,6-dioxo-2,7-diazaspiro[3.5]nonan-2-y1)-3-hydroxy-N-methylbutanamide (DA & DB):
To a solution of PPh3 (10.95 g, 0.041 mol) and DTAD (9.61 g, 0.041 mol) in THF
(40 mi.) was stirred at room temperature under nitrogen atmosphere for 15 minutes.
Then compound 6 (6 g, 0.020 mol) in THF (10 mL) was added to the reaction mixture and allowed to stir 2 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice water and concentrated under reduced pressure. Obtained crude material was purified by silica gel column chromatography eluting 10% Me0H/ CH2C12 to obtain mixture of DA &
DB (1.1 g, 19%) as white solid, which was separated by normal phase purification followed by chiral HPLC purification to obtain DA (60 mg) as hygroscopic white solid and DB (80 mg) as hygroscopic white solid.
DA: 1H NMR (400 MHz, DMSO-d6) 6 7.79-7.71 (m, 1H), 7.45 (s, 1H), 5.13 (t, Jr 5.3 Hz, 1H), 3.64-3.55 (m, 1H), 3.47 (dd, J= 5.1, 10.7 Hz, 1H), 3.18-3.07 (m, 3H), 2.92-2.83 (m, 1H), 2.63 (d, J= 4.6 Hz, 3H), 2.58-2.52 (m, 1H), 2.13 (d, J= 17.3 Hz, 1H), 2.04-1.91 (m, 1H), 1.83-1.74 (m, 1H), 1.20 (d, J = 5.5 Hz, 3H). LCMS (ES!): m/z 270.1 [M++11. HPLC:
95.39%.
Chiral HPLC: 97.28%. Column: CHIRALPAK IC (250*4.6 mm, 51..tm); Mobile Phase A: 0.1%
DEA in n-hexane; Mobile Phase B: Et0H:Me0H (50:50); A:B :: 60:40; Flow rate:
1.0 mL/min; Retention time: 8.716.
DB: 1H NMR (400 MHz, DMSO-d6) 6 7.78 (br d, J= 4.6 Hz, 1H), 7.41 (s, 1H), 5.10 (t, J= 5.3 Hz, 1H), 3.58 (dd, J= 5.4, 10.7 Hz, 1H), 3.46 (dd, J= 5.3, 10.7 Hz, 1H), 3.17-3.05 (m, 3H), 2.93-2.83 (m, 1H), 2.63 (d, J= 4.8 Hz, 3H), 2.55 (dd, J= 0.9, 17.2 Hz, 1H), 2.15 (d, J= 17.3 Hz, 1H), 2.00-1.88 (m, 1H), 1.83-1.72 (m, 1H), 1.20 (d, J= 5.6 Hz, 3H). LCMS
(ES!): m/z 270.1 [M++1]. HPLC: 96.43%. Chiral HPLC: 99.54%. Column: CHIRALPAK IC (250*4.6 mm, 51..tm); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: Et0H:Me0H
(50:50) A:B :: 60:40; Flow rate: 1.0 mL/min; Retention time: 10.289.
Date recue/Date received 2023-03-06
Synthesis of ((benzyloxy)carbony1)-L-threonine (B):
To a solution of L-threonine (20 g, 0.17 mol) in 1,4-dioxane and water (1:1, 200 mL) was added NaOH (27.35 g, 0.683 mol) followed by drop wise addition of CbzCI
(50% solution in toluene, 87 mL, 0.256 mol) at 0 C and stirred at room temperature for 16 h. The reaction mixture was diluted with cold water (100 mL) and washed with Et0Ac (100 mL).
The aqueous layer was acidified with aqueous IN HC1 and extracted with Et0Ac (3 x 100 mL).
The combined organic layer was washed with brine (100 mL) and dried over anhydrous Na2SO4, concentrated under reduced pressure to afford compound B (32 g, 75 %) as a white solid.
'H NMR (400 MHz, DMSO-d6) 6 12.64 (br s, 1H), 7.40 - 7.28 (m, 5H), 6.95 (d, J=
8.9 Hz, 1H), 5.03 (s, 2H), 4.62 - 4.53 (m, 1H), 4.12 - 4.00 (m, 1H), 3.98 - 3.93 (m, 1H), 1.09 (cl, J= 6.4 Hz, 3H). LCMS (ESI): m/z 254.1 [M++1].
Synthesis of benzyl 42S,3R)-3-hydroxy-1-(methylamino)-1-oxobutan-2-yDcarbamate (C):
To a solution of B (6 g, 23.71 mmol) in CH2C12 (100 mL) were added HOBt (4.8 g, 35.57 mmol), EDC.HC1 (6.83 g, 35.57 mmol), methylamine (2M in THF) (23.7 mL, 47.43 mmol) and DIPEA (13 mL, 71.14 mmol) at 0 C under nitrogen atmosphere and stirred at room temperature for 16 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (200 mL) and extracted with DCM (2 x 200 mL). The combined organic layer was washed with aqueous 10% citric acid (100 ml), saturated aqueous NaHCO3 (100 mL), brine (100 mL), dried over Na2SO4 and concentrated under reduced pressure. The residue was purified by Combi-Flash chromatography eluting with 80% Et0Ac/n-hexane to afford compound C (2.5 g, 39%) as a white solid. 1E NMR (400 MHz, DMSO-d6) 6 7.77 (br d, J= 4.4 Hz, 1H), 7.40 - 7.27 (m, 5H), 6.84 (br d, J= 8.8 Hz, 1H), 5.10 - 4.98 (m, 2H), 4.74 (d, J
= 6.0 Hz, 1H), 3.99 - 3.88 (m, 1H), 3.85 (dd, J=4.2, 8.7 Hz, 1H), 2.59 (d, Jr 4.6 Hz, 3H), 1.03 (d, J= 6.4 Hz, 3H). LCMS (ESI): m/z 267.1 [M++1].
Synthesis of (2S,3R)-2-amino-3-hydroxy-N-methylbutanamide (Int-D):
To a solution of C (2.5 g, 9.39 mmol) in Me0H (30 mL), 10% Pd/C (50% wet, 1 g) was added and stirred under H2 atmosphere (balloon) for 16 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and washed with Me0H and H20 (250 mL, 1:1). The filtrate was concentrated under reduced pressure to afford hit-D (1.1 g, 88%) as a white solid. 1E NMR (400 MHz, DMSO-d6) 6 7.82 (br d, J= 2.5 Hz, Date recue/Date received 2023-03-06
Synthesis of DC & DD:
0 0 0 Bt10 0 Bn0 HNOH Step-1 FiNb4¨ Step-2 LIHMDS EiNb40¨ Step-3 HNh4OH Step-4 0 DMS, K2CO3 0 LiOH
HATU
THF BOMCI Glycine methyl SM 1 2 3 ester.HCI
0 Bn0 0 HO 0 0 Step-6 Step-7 SteP-5 re Pd/C, H2 "" d DTAD, PPh3 HN N¨) Methanolic.N.H3 HN N--)rNH2 0 0 \ 0 0 DC
Synthesis of 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylic acid (3):
The experimental procedure for the synthesis compound 3 has been captured under the synthesis of CA & CB (as compound 3).
Synthesis of methyl (4-((benzyloxy)methyl)-2-oxopiperidine-4-carbonyl)glycinate (4):
To a stirring solution of compound 3 (7 g, 0.026 mol) in CH2C12 (70 mL) were added DIPEA (14.2 mL, 0.079 mol), Glycine methyl ester.HC1 (3.67 g, 0.029 mol) and HATU (12.1 g, 0.031 mol) at 0 C under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water and extracted with CH2C12 (2 x 200 mL). The organic layer was washed with saturated aqueous NII4C1, dried over anhydrous Na2SO4 and concentrated under reduced pressure to afford crude compound which was purified by column chromatography by eluting with 5% Me0H/ C112C12 to obtain compound 4 ( 8 g, 90%) as thick syrup. III NMR (400 MHz, DMSO-d6) 6 8.20 (t, J= 5.7 Hz, 1H), 7.40-7.24 (m, 6H), 4.48 (s, 2H), 3.94-3.73 (m, 2H), 3.61 (s, 3H), 3.59-3.46 (m, 2H), 3.19-3.03 (m, 2H), 2.55 (dd, J= 1.0, 17.1 Hz, 1H), 2.05 (d, J= 17.1 Hz, 1H), 1.97-1.90 (m, 1H), 1.83-1.72 (m, 1H).
LCMS (m/z):
335.1 [M4+1].
Date recue/Date received 2023-03-06
To a stirring solution of compound 4 (8 g, 0.023 mol) in Me0H (160 mL) was added 10% Pd/C (50% wet, 4 g) at room temperature and stirred for 48 h under H2 atmosphere (balloon pressure). After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and the pad was washed with Me0H (500 mL). Obtained filtrate was concentrated under reduced pressure. The crude material was triturated with Et20/
n-pentane and dried under vacuum to afford compound 5 (4 g, 70%) as white solid. 1H NMR
(400 MHz, DMSO-d6) 6 8.12 (t, J= 5.6 Hz, 1H), 7.27(s, 1H), 5.05 (t, J= 5.3 Hz, 1H), 3.96-3.85 (m, 1H), 3.81-3.69 (m, 1H), 3.62 (s, 3H), 3.53-3.41 (m, 2H), 3.19-3.05 (m, 2H), 2.48-2.42 (m, 1H), 2.04-1.87 (m, 2H), 1.78-1.71 (m, 1H). LCMS (ESI) m/z 245.1 [M++11.
Synthesis of methyl 2-(1,6-dioxo-2,7-diazaspiro[3.5]nonan-2-ypacetate (6):
To a solution of PPh3 (13.19 g, 0.0503 mol) and DTAD (11.58 g, 0.0503 mol) in THF
(20 mL) was stirred at room temperature under nitrogen atmosphere for 15 minutes. Then compound 5 (4.1 g, 0.016 mol) in THF (20 mL) was added to the reaction mixture and allowed to stir 3 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice and concentrated under reduced pressure. Obtained crude material was purified by neutral alumina column chromatography eluting 4% Me0H/ CH2C12 to obtain compound 6 (1.9 g, 50%) as white solid. 1H NMR (400 MHz, DMSO-d6) 6 7.61-7.52 (m, 1H), 4.03 (d, J= 1.6 Hz, 2H), 3.31-3.27 (m, 1H), 3.21-3.15 (m, 4H), 2.45-2.33 (m, 2H), 1.99-1.85 (m, 2H), 1.52-1.41 (m, 2H). LCMS (ESI): m/z 277.0 [M++1].
Synthesis of 2-(1,6-dioxo-2,7-diazaspiroP.511nonan-2-ypacetamide (DC & DD):
To a solution of compound 6 (1 g, 0.004 mol) in Me0H (10 mL) was added methanolic ammonia (20 mL) at room temperature in sealed tube. The reaction mixture was stirred for 16 h. After consumption of the starting material (by TLC), volatiles were evaporated under reduced pressure. Obtained crude material was purified by neutral alumina column chromatography eluting 4% Me0H/ CH2C12 to obtain mixture of DC & DD (220 mg, 23%) as white solid. Two more batched were performed to obtain 260 mg of mixture of DC
& DD. The mixture (480 mg) was separated by chiral HPLC purification to obtain DC (187 mg) as white solid and DD (190 mg) as white solid.
DC: 1H NMR (400 MHz, D20) 6 4.15-4.03 (m, 2H), 3.60-3.51 (m, 2H), 3.49-3.39 (m, 2H), 2.80-2.68 (m, 2H), 2.23-2.11 (m, 2H). LCMS (ESI): m/z 212.0 [M++1]. HPLC:
99.13%.
Chiral HPLC: 100.00%. Column: CHIRALPAK IA (250*4.6 mm, 5 m); Mobile Phase A:
Date recue/Date received 2023-03-06
DD: 1H NMR (400 MHz, D20) 6 4.14-4.03 (m, 2H), 3.59-3.51 (m, 2H), 3.49-3.38 (m, 2H), 2.81-2.68 (m, 2H), 2.24-2.11 (m, 2H). LCMS (ES!): m/z 212.0 [M++1]. HPLC:
99.58%.
Chiral HPLC: 100.00%. Column: CHIRALPAK IA (250*4.6 mm, 5 m); Mobile Phase A:
0.1% DEA in n-hexane; Mobile Phase B: DCM:Me0H (50:50); A:B :: 70:30; Flow rate: 1.0 mL/min; Retention time: 11.513.
Synthesis of DE & DF:
0 Bno 0 Bn0 OH Step-1 p¨ Step-2 0¨ Step-3. pH Step-4 DMS, K2CO3 HN\ LIFIMDS HN\ / LOH HN Isobutyl THF BOMCI amine, Bn0 0 0H
Step4 Step-6 HN N
HN
DIAD, PPh3 HN 0 0 DE
DF
Synthesis of 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylic acid (3):
The experimental procedure for the synthesis compound 3 has been captured under the synthesis of CA & CB (as compound 3).
Synthesis of 4-((benzyloxy)methyl)-N-isobuty1-2-oxopiperidine-4-carboxamide (4):
To a stirring solution of compound 3 (7 g, 0.026 mol) in CH2C12 (100 mL) were added DIPEA (13.8 mL, 0.079 mol), isobutyl amine (2.3 g, 0.031 mol) and HATU (12.1 g, 0.031 mol) at 0 C under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water and extracted with CH2C12 (2 x 200 mL). The organic layer was washed with brine, dried over anhydrous Na2SO4 and concentrated under reduced pressure to afford crude compound which was purified by column chromatography by eluting with 5%
Me0H/ CH2C12 to obtain compound 4 ( 8 g, 95%) as thick syrup. 1H NMR (400 MHz, DMSO-d6) 6 7.68 (t, J= 5.8 Hz, 1H), 7.38-7.25 (m, 6H), 4.46 (s, 2H), 3.57 (d, J=
9.3 Hz, 1H), 3.46 (d, J= 9.2 Hz, 1H), 3.19-2.99 (m, 2H), 2.96-2.86 (m, 2H), 2.57 (dd, J= 1.4, 17.1 Hz, 1H), 2.04 (d, J--= 17.1 Hz, 1H), 1.98-1.89 (m, 1H), 1.85-1.63 (m, 2H), 0.80 (d, J= 6.7 Hz, 6H). LCMS (m/z):
319.3 [M++1].
Date recue/Date received 2023-03-06
To a stirring solution of compound 4 (8.5 g, 0.026 mol) in Me0H (150 mL) was added 10% Pd/C (50% wet, 8 g) at room temperature and stirred for 48 h under H2 atmosphere (balloon pressure). After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and the pad was washed with Me0H (500 mL). Obtained filtrate was concentrated under reduced pressure. The crude material was triturated with Et20/
n-pentane and dried under vacuum to afford compound 5 (2.9 g, 50%) as white solid.
1H NMR (400 MHz, DMSO-d6) 6 7.59 (t, J= 5.7 Hz, 1H), 7.26 (s, 1H), 5.10-4.99 (m, 1H), 3.51-3.39 (m, 2H), 3.16-3.07 (m, 1H), 3.06-2.97 (m, 1H), 2.95-2.82(m, 2H), 2.45 (d, J= 1.6 Hz, 1H), 2.01-1.85 (m, 2H), 1.80-1.61 (m, 2H), 0.81 (d, J= 6.7 Hz, 6H). LCMS
(ES!): m/z 229.0 [M++11. HPLC: 99.56%.
Synthesis of 2-isobuty1-2,7-diazaspiro[3.5]nonane-1,6-dione (DE & DF):
To a solution of PPh3 (7.5 g, 0.028 mol) and DTAD (6.7 g, 0.028 mol) in THF
(10 mL) was stirred at room temperature under nitrogen atmosphere for 15 minutes. Then compound 5 (2.2 g, 0.009 mol) in THF (12 mL) was added to the reaction mixture and allowed to stir 3 h.
After consumption of the starting material (by TLC), reaction mixture was quenched with ice and concentrated under reduced pressure. Obtained crude material was purified by neutral alumina column chromatography eluting 4% Me0H/ CH2C12 to obtain mixture of DE
& DF
(800 mg, 79%) as white solid. 300 mg of racemic of DE & DF was separated by chiral HPLC
purification to obtain DE (62 mg) as white solid and DF (69 mg) as white solid.
DE: 1H NMR (400 MHz, DMSO-d6) 8 7.56 (br s, 1H), 3.29 (br s, 1H), 3.24-3.09 (m, 3H), 2.91 (d, J= 6.8 Hz, 2H), 2.43-2.29 (m, 2H), 1.94-1.76 (m, 3H), 0.85 (d, J= 6.7 Hz, 6H). LCMS
(ES!): m/z 211.2 [M++1]. HPLC: 99.55%. Chiral HPLC: 100.00%. Column: CHIRALPAK
IA (250*4.6 mm, 51.1m); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B:
Et0H
A:B 80:20; Flow rate: 1.0 mL/min; Retention time: 9.693.
DF: 1H NMR (400 MHz, DMSO-d6) ö 7.56 (br s, 1H), 3.29 (br s, 1H), 3.24-3.10 (m, 3H), 2.91 (d, J= 6.7 Hz, 2H), 2.42-2.29 (m, 2H), 1.96-1.74 (m, 3H), 0.85 (d, J= 6.7 Hz, 6H). LCMS
(ESI): m/z 211.2 [M++1]. HPLC: 99.20%. Chiral HPLC: 100.00%. Column: CHIRALPAK
IA (250*4.6 mm, 51..tm); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B:
Et0H; A:B
:: 80:20; Flow rate: 1.0 mL/min; Retention time: 12.647.
Date recue/Date received 2023-03-06
0 Bn0 o Bn0 Step-1 0_ Step-2 0_ Step-3 0H Step-4 HNs ¨bOH LiHMDS HN HN
0 DMS, K,CO3 0 0 LOH Methyl THF BOMCI amine, Bn0 I 01-I 0 NH Step-6 ' H2 HNNH DTAD, PPh3 DG
DH
Synthesis of 4-((benzyloxy)methyl)-2-oxopiperidine-4-carboxylic acid (3):
The experimental procedure for the synthesis compound 3 has been captured under the synthesis of CA & CB (as compound 3).
Synthesis of 4-((benzyloxy)methyl)-N-methyl-2-oxopiperidine-4-carboxamide (4):
To a stirring solution of compound 3 (7 g, 0.026 mol) in CH2C12 (140 mL) were added DIPEA (14.28 mL, 0.079 mol), HATU (12.1 g, 0.031 mol) and methyl amine (2M
solution in THF, 14.6 mL, 0.029 mol) at 0 C under nitrogen atmosphere. The reaction mixture was brought to room temperature and stirred for 16 h. After consumption of the starting material (by '1tC), reaction mixture was diluted with CH2C12 (200 mL) and washed with saturated aqueous NH4C1. The organic layer was dried over anhydrous Na2SO4 and concentrated under reduced pressure to afford crude compound which was purified by combiFlash chromatography by eluting 2% Me0H/ EtOAc to obtain compound 4 ( 4 g, 54%) as white solid. 1H NMR
(500 MHz, DMSO-d6) 8 7.63 (br d, J= 4.3 Hz, 1H), 7.40-7.25 (m, 6H), 4.46 (s, 2H), 3.53-3.41 (m, 2H), 3.10-2.94 (m, 2H), 2.60 (d, J= 4.3 Hz, 3H), 2.57-2.53 (m, 1H), 2.05 (d, J= 17.1 Hz, 1H), 1.96-1.85 (m, 1H), 1.79-1.69 (m, 1H). LCMS (m/z): 277.0 [M++1].
Synthesis of 4-(hydroxymethyl)-N-methyl-2-oxopiperidine-4-carboxamide (5):
To a stirring solution of compound 4 (4 g, 0.014 mol) in Me0H (80 mL) was added 10% Pd/C (50% wet, 4 g) at room temperature and stirred for 16 h under H2 atmosphere (balloon pressure). After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and the pad was washed with Me0H (100 mL). Obtained filtrate was concentrated to obtain crude material which was purified by silica gel column chromatography by eluting 8% Me0H/ CH2C12 to afford compound 5 (1.6 g, 59%) as white solid. 1H NMR (400 MHz, DMSO-d6) 8 7.55 (d, J= 4.4 Hz, 1H), 7.27 (s, 1H), 5.04-4.92 (m, Date recue/Date received 2023-03-06
LCMS (ESI):
m/z 187.1 [M++1].
Synthesis of 2-methyl-2,7-diazaspiro[3.5]nonane-1,6-dione (DG & DH):
To a solution of PPh3 (5.91 g, 0.022 mol) and DTAD (5.19 g, 0.022 mol) in THF
(10 mI,) was stirred at room temperature under nitrogen atmosphere for 15 minutes.
Then compound 5 (1.4 g, 0.007 mol) in THF: 1,4-dioxane (20 mL, 1:1) was added to the reaction mixture and allowed to stir 2 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice and concentrated under reduced pressure.
Obtained crude material was purified by neutral alumina column chromatography eluting 4%
Me0H/ CH2C12 to afford crude compound which was purified by column chromatography by eluting 5%
Me0H/ CH2C12 to obtain mixture of DG & DH (880 mg, 69%) as white solid, which was separated by chiral HPLC purification to obtain DG (230 mg) as white solid and DH (300 mg) as white solid.
DG: 1H NMR (400 MHz, DMSO-d6) 6 7.55 (br s, 1H), 3.30-3.25 (m, 1H), 3.20-3.11 (m, 2H), 3.09 (d, Jr 5.5 Hz, 1H), 2.72 (s, 3H), 2.44-2.25 (m, 2H), 1.95-1.79 (m, 2H).
LCMS (ESI): m/z 169.1 [M++11. HPLC: 99.31%. Chiral HPLC: 100.00%. Column: CHIRALPAK IA
(250*4.6 mm, 51..tm); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: Et0H; A:B
:: 80:20;
Flow rate: 1.0 mL/min; Retention time: 11.061.
DH: 1H NMR (400 MHz, DMSO-d6) 6 7.55 (br s, 1H), 3.30-3.25 (m, 1H), 3.20-3.11 (m, 2H), 3.09 (d, J= 5.4 Hz, 1H), 2.72 (s, 3H), 2.42-2.27 (m, 2H), 1.93-1.82 (m, 2H).
LCMS (ESI): m/z 169.0 [M++11. HPLC: 99.37%. Chiral HPLC: 97.14%. Column: CHIRALPAK IA (250*4.6 mm, 5um); Mobile Phase A: 0.1% DEA in n-hexane; Mobile Phase B: Et0H; A:B ::
80:20;
Flow rate: 1.0 mL/min; Retention time: 13.372.
Date recue/Date received 2023-03-06
EtO0C COOEt Xs--COOEt ACOOH
EtO0C COOEt Step-1 HN Step-2 N co0Et Step-3 N c00Et Br DMF F Na0Et/Et0H KOH, Et0H
F
1 Nla SM- A
1 H,N O 2 4 COO EL
Step-4 0 N NH 4/ Step-5 N N= Step-6 0 N
NH' 0111 THE Me0H NaBI-14, DIAD,TPP, 0 THF,DMF Wi DIPEA, BX
HATU,DCM F F 8 F BY
Synthesis of diethyl 2((4-fluorophenyl)amino)malonate (2):
To a stirred solution of diethyl 2-bromomalonate, SM-1 (100.0 g, 420.0 mmol) in DMF
(500 mL), 4-fluoroaniline, 1 (46.7 g, 420.0 mmol) was added at 0 C and stirred at 100 C for 12 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water, solid obtained was filtered and dried to afford compound 2 (95.0 g, 84%) as a light brown solid. LCMS (ES!): m/z 270.10 [M++11.
Synthesis of diethyl 1-(4-fluorophenyl)-3-methyl-5-oxopyrrolidine-2,2-dicarboxylate (4):
To a stirred solution of compound 2 (25.0 g, 92.9 mmol) and methyl (E)-but-2-enoate 3 (10.8 mL, 102.1 mmol) in Et0H (100 mL) was added Na0Et (25 mL, 21% solution in Et0H) in sealed tube. The reaction mixture was stirred at 80 C for 12 h. After consumption of the starting material (by TLC), reaction mixture was concentrated under reduced pressure, diluted with water (250 mL) and extracted with Et0Ac (3 x 300 mL). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 15-30% Et0Aci hexane to afford 4 (12.0 g, 38%) as a brown oil. LCMS (ES!): m/z 338.0 1M++11.
Synthesis of 2-(ethoxycarbonyl)-1-(4-fluoropheny1)-3-methyl-5-oxopyrrolidine-2-carboxylic acid (5):
To a stirred solution of 4 (11.0 g, 32.6 mmol) in Et0H (40 mL) and KOH (2.73 g, 48.9 mmol) in H20 (10 mL) was added drop wise.at RT and stirred for 12 h. After consumption of the starting material (by TLC), mixture was concentrated under reduced pressure, diluted with water (200 mL) and extracted with diethyl ether (200 mL). The aqueous layer was acidified with 1N HC1 (pH--2) and extracted with Et0Ac (5 x 200 mL). Combined organic layer was Date recue/Date received 2023-03-06
Synthesis of ethyl 2-(lbenzylcarbamoyl)-1-(4-fluoropheny1)-3-methyl-5-oxopyrrolidine-2-carboxylate (7):
To a stirred solution of 5 (1.0 g, 3.23 mmol) in DCM (10 mL), benzyl amine 6 (0.41 g, 3.87 mmol), HATU (1.84 g, 4.84 mmol), DIPEA (1.4 mL, 8.07 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), mixture was quenched with water (30 mL) and extracted with DCM (3 x 20 mL). The combined organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-50% Et0Ac/hexane to afford 7 (0.92 g, 72%) as a yellow oil. LCMS (ESI): m/z 398.43 [M++1].
Synthesis of N-benzy1-1-(4-fluoropheny1)-2-(hydroxymethyl)-3-methyl-5-oxopyrrolidine-2-carboxamide (8):
To a stirred solution of 7 (2.3 g, 5.77 mmol) in THF and Me0H (3:1, 20 mL), NaBHa (1.09 g, 28.8 mmol) was added at 0 C portion wise over period of 20 min and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (30 mL) and extracted with Et0Ac (3 x 50 mL). The combined organic layer was washed with brine (50 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-50%
Et0Ac/
hexane to afford 8 (1.36 g, 66%) as a white solid. LCMS (ESI): m/z 357.0 [M++11.
Synthesis of 2-benzyl-5-(4-fluoropheny1)-8-methyl-2,5-diazaspiro[3.4]octane-1,6-dione (BX & BY):
To a stirred solution of triphenylphosphine (1.30 g, 4.96 mmol) in THF (20 mL), diisopropyl azodicarboxylate (1.0 g, 4.96 mmol) was added dropwise at 0 C and stirred at same temperature for 20 min. A solution of compound 8 (1.36 g, 3.81 mmol) in THF and DMF
(15 mL/1.5 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), mixture was diluted with water (30 mL) and extracted with Et0Ac (3 x 30 mL). The combined organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% acetone/ hexane to afford isomeric mixture of compounds BX
Date recue/Date received 2023-03-06
followed by chiral HPLC to afford BX (0.19 g) and BY (0.19 g) as an off white solid.
BX: 1H NMR: (400 MHz, DMSO-d6): 8 7.31 -7.15 (m, 7H), 6.79- 6.77 (d, J= 6.8 Hz, 2H), 4.46 -4.42 (d, J=15.6 Hz, 1H), 4.11 -4.07 (d, J=15.6 Hz, 1H), 3.49 - 3.47 (d, J= 7.2 Hz, 1H), 2.98 -2.96 (d, J= 6.8 Hz, 1H), 2.79 -2.55 (m, 2H), 2.25 -2.18 (m, 1H), 1.13 - 1.11 (d, J
= 6.8 Hz, 3H). LCMS (ESI): m/z 339.0 [M++1]. HPLC: 98.99%. Chiral HPLC: 100%.
Column: YMC Chiral Amylose-SA (250*4.6 mm, 5jAm); Mobile Phase A: n-Hexane:
CH3COOH (99&0.1% CH3COOH); Mobile Phase B: IPA (30%); A:B :: 70:30, Flow rate:
1.0 mLimin; Retention time: 5.863.
BY: 1H NMR: (400 MHz, DMSO-d6): 8 7.31 -7.15 (m, 7H), 6.79- 6.77 (d, J= 7.2 Hz, 2H), 4.46 -4.42 (d, J= 15.6 Hz, 1H), 4.11 -4.07 (d, J= 15.6 Hz, 1H), 3.49 - 3.47 (d, J= 7.2 Hz, 1H), 2.98 -2.96 (d, J= 6.8 Hz, 1H), 2.79 - 2.54 (m, 2H), 2.25 - 2.18 (m, 1H), 1.13 - 1.11 (d, J
= 7.2 Hz, 3H). LCMS (ES!): m/z 339.0 [M++1]. HPLC: 99.76%. Chiral HPLC:
99.57%.
Column: YMC Chiral Amylose-SA (250*4.6 mm, Sum); Mobile Phase A: n-Hexane:
CH3COOH (99&0.1% CH3COOH); Mobile Phase B: IPA(30%); A:B :: 70:30, Flow rate:
1.0 rnLimin; Retention time: 9.895.
Synthesis of CE & CF:
p-1 ElOOCICOOEt ste EtO0C COOEt _______ Step-3 0 N COOEt Step-3 0 N 000E1 [MAFBr IA F Na0Et/Et0H KOH, Et0H
Fle4 F "' OH
it Step-4 Stap-5 Step-6 *
mc 0 N NH * ome , NaBH4, 0 Ni-NH ome DIAD,TP
NH P, THF*Me0H 411i THF, DMF
DIPEA, Me0 MO
HATU, DCM
0$91 OMe Step-7 H step-e , n CAN ACI; NOHN ome Sfi a 2 mow Cs2CO3, ACN "IP
CE
CF
Date recue/Date received 2023-03-06
The experimental procedure for the synthesis compound 5 has been captured under the synthesis of BX & BY (as compound 5).
Synthesis of ethyl 2-((2,4-dimethoxybenzyl)carbamoy1)-1-(4-fluoropheny1)-3-methyl-5-oxopyrrolidine-2-carboxylate (7):
To a stirred solution of compound 5 (15 g, 48.5 mmol) in DCM (150 mL), (2,4-dimethoxyphenyOmethanamine, 6 (9.73 g, 58.2 mmol), HATU (27.6 g, 72.7 mmol) and DIPEA
(21.1 mL, 121.2 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h.
After consumption of the starting material (by TLC), reaction was quenched with water (200 mL) and extracted with DCM (3 x 200 mL). The combined organic layer was washed with brine (250 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-50% Et0Ac/hexane to afford compound 7(11.0 g, 49.5%) as a yellow oil. LCMS (ES!): m/z 459.0 [WM.
Synthesis of N-(2,4-dimethoxybenzy1)-1-(4-fluoropheny1)-2-(hydroxymethyl)-3-methyl-5-oxopyrrolidine-2-carboxamide (8):
To a stirred solution of compound 7 (11.0 g, 24.0 mmol) in THF and Me0H (3:1, mL), NaBI-14 (4.56 g, 120.0 mmol) was added at 0 C portion wise over period of 10 min.
Reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (200 mL) and extracted with Et0Ac (3 x 200 mL). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 8 (9.0 g, 90%) as a white solid.
LCMS (ES!): m/z 417.0 [M++1].
Synthesis of 2-(2,4-dimethoxybenzyl)-5-(4-fluoropheny1)-8-methyl-2,5-diazaspiroP.4]octane-1,6-dione (9):
To a stirred solution of tiphenylphosphine (8.18 g, 31.2 mmol) in THF (100 mL), diisopropyl azodicarboxylate (6.32 g, 31.2 mmol) was added dropwise at 0 C
and stirred at same temperature for 20 min. A solution of compound 8 (10.0 g, 24.0 mmol) in THF and DMF
(15 mL/1.5 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (150 mL) and extracted with Et0Ac (3 x 150 mL). The combined organic layer was washed with brine (200 mL), dried Date recue/Date received 2023-03-06
Synthesis of 5-(4-fluoropheny1)-8-methyl-2,5-diazaspiro 13.41octane-1,6-dione (10):
To a stirred solution of compound 9 (8.0 g, 20.0 mmol) in acetonitrile and H20 (7:3, 100 mL) ceric ammonium nitrate (22.0 g, 40.0 mmol) was added portion wise at 0 C and stirred reaction mixture at RT for 5 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (150 mL) and extracted with EtOAc (3 x 150 mL). The combined organic layer was washed with brine (200 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 10 (4.0 g, 80%) as a yellow solid.
LCMS (ESI):
m/z 249.0 [M++1].
Synthesis of 2-(5-(4-fluoropheny1)-8-methy1-1,6-dioxo-2,5-diazaspiropAloctan-2-yl)acetamide (CE & CF):
To a stirred solution of compound 10 (4.0 g, 16.1 mmol) in acetonitrile (50 mL), Cs2CO3 (10.5 g, 32.2 mmol), 2-bromoacetamide (2.66 g, 19.3 mmol) were added at RT and stirred for 12 h. After consumption of the starting material (by TLC), the reaction mixture was diluted with water (75 mL) and extracted with EtOAc (3 x 75 mL). The combined organic layer was washed with brine (100 mL), dried over Na2SO4 and concentrated under reduced pressure.
The crude product was purified by column chromatography using 2-5% Me0H/ DCM
to afford isomeric mixture of compounds CE and CF (0.35 g) as an off white solid. The isomeric mixture was purified by preparative HPLC followed by chiral HPLC to afford CE
(0.08 g) and CF (0.14 g) as an off white solid.
CE: 1H NMR (400 MHz, DMSO-d6): 6 7.32 - 7.22 (m, 5H), 7.05 (brs, 1H), 3.80 -3.76 (d, J=
16. 8 Hz, 1H), 3.68 -3.66 (d, J= 6.8 Hz, 1H), 3.62 -3.58 (d, J= 16.8 Hz, 1H), 3.23 -3.21 (d, J
= 6.8 Hz, 1H), 2.76 - 2.57 (m, 2H), 2.26 -2.20 (m, 1H), 1.23 - 1.21 (d, J= 6.8 Hz, 3H).
LCMS (ESI): m/z 306.0 [M++1]. HPLC: 99.74%. Chiral HPLC: 99.58%. Column: YMC
Chiral Amylose-SA (250*4.6 mm, 5um); Mobile Phase A: n-Hexane:CH3COOH (0.1%
CH3COOH); B: IPA(25%); A:B 75:25, Flow rate: 1.0 mL/min; Retention time:
7.109.
CF: 1H NMR (400 MHz, DMSO-d6) 6 7.32 - 7.22 (m, 5H), 7.04 (brs, 1H), 3.80 -3.76 (d, J=
16.8 Hz, 1H), 3.68 - 3.66 (d, J= 6.8 Hz, 1H), 3.62 - 3.58 (d, J= 16.8 Hz, 1H), 3.23 - 3.21 (d, J
= 6.4 Hz, 1H), 2.74 - 2.57 (m, 2H), 2.26 -2.20 (m, 1H), 1.23 - 1.21 (d, J= 7.2 Hz, 3H).
LCMS (ESI): m/z 306.0 [M++1]. HPLC: 99.82%. Chiral HPLC: 99.49%. Column: YMC
Chiral Amylose-SA (250*4.6 mm, 51.1m). Mobile Phase A: n-Hexane: CH3COOH
(99&0.1%
Date recue/Date received 2023-03-06
Retention time:
9.958.
Synthesis of CG & CH:
Step-1 SOCl2, DMF
EtO0CyCOOEt Step-2 Et003_N /V, Step-3 E OtO0C,T OEt Step-4 0 COOEt n ' reLCOOEt Br ,Ersii 0 ACN EtO0C \ H2, Pd/C, Et0Ac --'NH 2 ¨ I
---""----)LCI
SM-1 SM-2 3 4 Pyridine, 5 DCM
s,õ
0 COOEt 0 HO
N--iCOOEt 1 Step-5 ,-/--\-.1.(NCOOEt Step-6 CO0E1 Step-7.T, ---'---).L' =
I mCPBA, DCM 0 COOEt Na0Et, Et0H N COOEt (TfO)20, Py TfO BnHN BnHN BnHN
COOEt Step-8 COOEt Step-9 COOEt Step-10 0 COOEt 0 N c00El Bn-NH, ' N COOEt i KOH, Et0H N COON Bn-NH2, DIPEA7 1 1 N TNH fe Pyridine, DCM HATU, DCM
BnHN
OH .BnHN
Step-11 Step-13 H2N
Step-12 'NN
NaBH4, ' 0 N NH . N
\ TPP, DIAD,THF , N H2, Pd/C, Me0H N
THF, Me0H 0 '''' \ 0 0 \ 0 CG
CH
Synthesis of (E)-but-2-enoyl chloride (2):
Thionyl chloride (118 mL) was added in stirred solution of (E)-but-2-enoic acid, compound 1(125.0 g, 1.45 mmol) and DMF (1- 2 drops) at 0 C and stirred reaction mixture at 50 C for 2 h. After consumption of the starting material, reaction mixture was concentrated under reduced pressure to afford compound 2 (100 g, crude) as a colourless oil.
Synthesis of diethyl 2-(benzyl(methyl)amino)malonate (3):
To a stirred solution of diethyl 2-bromomalonate SM-1 (100 g, 420.0 mmol) in acetonitrile (1L), N-methyl-1-phenylmethanamine SM-2 (101.8 g, 840.0 mmol) was added at 0 C and reaction mixture stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was filtered and filtrate was concentrated under reduced pressure to afford 3 (200 g, crude) as a yellow oil. LCMS (ESI): m/z 280.15 1M++1].
Synthesis of diethyl 2-(methylamino)malonate (4):
Date recue/Date received 2023-03-06
Pd/C (50% wet, 15 g) was added at RT and stirred under hydrogen atmosphere (balloon) for 12 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and washed with Et0Ac (600 mL). The filtrate was concentrated under reduced pressure to afford compound 4 (84 g, crude) as a light yellow oil.
LCMS (ESI): m/z 190 [M++1].
Synthesis of diethyl (E)-2-(N-methylbut-2-enamido)malonate (5):
To a stirred solution of compound 4 (87 g, 460 mmol) in DCM (500 mL), (E)-but-enoyl chloride, 2 (57.7 g, 552 mmol), pyridine (72.6 g, 920 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (700 mL) and extracted with DCM (3 x 600 mL). The combined organic layer was washed with brine (700 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% Et0Ac/hexane to afford compound 5 (61 g, 51.6%) as a light yellow liquid.
Synthesis of diethyl 2-(N,3-dimethyloxirane-2-carboxamido)malonate (6):
To a stirred solution of compound 5 (61.0 g, 237 mmol) in DCM (700 mL), mCPBA
(122.7 g, 711.2 mmol) was added at 0 C and reaction mixture was stirred at RT
for 12 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water (700 mL) and extracted with DCM (3 x 600 mL). The combined organic layer was washed with brine (700 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% Et0Ac/ hexane to afford compound 6 (43.0 g, 66.3%) as a colourless liquid. LCMS (ESI): m/z 273.95[M++1].
Synthesis of diethyl 4-hydroxy-1,3-dimethy1-5-oxopyrrolidine-2,2-dicarboxylate (7):
To a stirred solution of compound 6 (43.0 g, 1516 mmol) in Et0H (420 mL), Na0Et (20.9 g, 307.3 mmol) was added at RT and stirred for 1 h. After consumption of the starting material (by TLC), the reaction mixture was concentrated under reduced pressure. Reaction mixture was diluted with water (500 mL) and extracted with DCM (3 x 400 mL).
The combined organic layer was washed with 1N HCI solution (500 mL) and brine (500 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 7 (40M
g, crude) as a light brown liquid.
Date recue/Date received 2023-03-06
To a stirred solution of compound 7 (40.0 g, 146.3 mmol) in DCM (400 mL), triflic anhydride (82.5 g, 292.7 mmol), pyridine (35 mL, 438.9 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (400 mL) and extracted with DCM (3 x 400 mL). The combined organic layer was washed with brine (500 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 8 (25.0 g, crude) as a light brown liquid.
Synthesis of diethyl 4-(benzylamino)-1,3-dimethy1-5-oxopyrrolidine-2,2-dicarboxylate (9):
To a stirred solution of compound 8 (25.0 g, 61.7 mmol) in DCM (250 mL), pyridine (74 mL, 92.5 mmol), benzyl amine (9.90 g, 92.5 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (300 mL) and extracted with DCM (3 x 300 mL).
The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% Et0Ac/hexane to afford to afford compound 9 (12.0 g, 53.8%) as a brown liquid.
Synthesis of 4-(lbenzylamino)-2-(ethoxycarb ony1)-1,3-dimethy1-5-oxopyrr olidine-2-carboxylic acid (10):
To a stirred solution of compound 9 (3.0 g, 8.28 mmol) in Et0H (30 mL), KOH
(0.46 g, 8.28 mmol) in H20 (10 mL) was added drop wise at RT and stirred for 4 h. After consumption of the starting material (by TLC), reaction mixture was concentrated under reduced pressure.
Mixture was diluted with water (40 mL) and extracted with diethyl ether (30 mL). The aqueous layer was acidified with 1N HC1 (pH-2) and extracted with Et0Ac (5 x 40 mL).
The combined organic layer was washed with brine (50 mL), dried over Na2SO4 and concentrated under reduced pressure. Crude product was purified by column chromatography using 10-30%
Et0Ac/ hexane to afford to afford compound 10 (2.5 g, 92%) as a pale yellow solid. LCMS
(ESI): m/z 335 [M++11.
Synthesis of ethyl 4-(lbenzylamino)-2-(benzylcarbamoy1)-1,3-dimethyl-5-oxopyrrolidine-2-carboxylate (11):
Date recue/Date received 2023-03-06
Synthesis of N-benzy1-4-(benzylamino)-2-(hydroxymethyl)-1,3-dimethyl-5-oxopyrrolidine-2-earboxamide (12):
To a stirred solution of compound 11 (2.0 g, 4.72 mmol) in THF and Me0H (3:1, mL), NaBH4 (0.89 g, 23.6 mmol) was added at 0 C portion wise over period of 10 min and stirred reaction mixture at RT for 4 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (40 mL) and extracted with Et0Ac (3 x 40 mL). The combined organic layer was washed with brine (40 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 12 (1.70 g, crude) as a pale yellow solid.
Synthesis of 2-benzy1-7-(benzylamino)-5,8-dimethy1-2,5-diazaspiro[3.4l0ctane-1,6-dione (13):
To a stirred solution of triphenylphosphine (1.51 g, 5.79 mmol) in THF (60 mL), di-isopropyl azodicarboxylate (1.17 g, 5.79 mmol) was added drop wise at 0 C and stirred at same temperature for 20 min. A solution of compound 12 (1.70 g, 4.45 mmol) in THF (15 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), mixture was diluted with water (30 mL) and extracted with DCM (3 x 30 mL). The combined organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 13 (2.0 g, crude) as a pale yellow solid. LCMS (ESI): m/z 363.43 [M++11.
Date recue/Date received 2023-03-06
CH):
To a stirred solution of compound 13 (2.0 g, 5.50 mmol) in Me0H (50 mL), 10%
Pd/C
(30% wet, 2.0 g) was added at RT and stirred under H2 atmosphere (balloon) for 12 h. After consumption of the starting material, reaction mixture was filtered through a pad of celite and washed with Me0H (100 mL). The filtrate was concentrated under reduced pressure. The crude product was purified by column chromatography using 2-5% Me0H/ DCM to afford isomeric mixture of compounds CG and CH (0.38 g) as an off white solid. The isomeric mixture was purified by preparative HPLC followed by chiral HPLC to afford CG (0.12 g) and CH (0.12 g) as an off white solid.
CG: 1H NMR (400 MHz, DMSO-d6) 8 7.41 - 7.28 (m, 5H), 4.46 (s, 2H), 3.38 - 3.34 (m, 3H), 2.66 (s, 3H), 2.47 - 2.44 (m, 1H), 1.74 (brs, 2H), 0.89 - 0.87 (d, J= 6.8 Hz, 3H). LCMS (ES!):
m/z 274.0 [M++1]. HPLC: 97.21%. Chiral HPLC: 99.49%. Column: Phenomenix Cellulose-4 (250*4.6 mm, 51.1m); Mobile Phase A: n-Hexane:TFA (99&0.1% 11A); Mobile Phase B:
IPA(60%); A:B :: 40:60, Flow rate: 1.0 mL/min; Retention time: 10.351.
CH: 1H NMR (400 MHz, DMSO-d6) 6 7.41 - 7.25 (m, 5H), 4.41 (s, 2H), 3.38 - 3.35 (m, 3H), 2.66 (s, 3H), 2.47 - 2.44 (m, 1H), 1.75 (brs, 2H), 0.895 - 0.876 (d, J = 7.6 Hz, 3H). LCMS
(ESI): m/z 274.0 [M++11. HPLC: 97.48%. Chiral HPLC: 97.49%. Column: Phenomenix Cellulose-4 (250*4.6 mm, 511m); Mobile Phase A: n-Hexane: ITA (99&0.1% 11A);
Mobile Phase B: IPA(60%); A:B :: 40:60, Flow rate: 1.0 mL/min; Retention time:
16.639.
Synthesis of DI & DJ:
Etooc.õ.r.cooEt stip-A E100C,(C C)gaih Step-B EtO0CCOOEt Step-1 ----c,C00Et Br Hz Pd/C,E10Ac Ne0E 00t/Et0H - r% COOEt *
Int-A B Cfonn 1 Step-2 .Z.c..COOH step_3 X-riN Step-4 0 Step.5 ' N CO& 40 D1AD, TPP, THF
KOH, E1OH 0 N COOEt HATU I 0 fp"' NaBH4, THF Me0H 0 N OH
R = 2,4-110MeBn Step-6 Ste-7 CS2CO3, 0 CAN, CH3CN H20 0 N
NH p Bromoacetami 0 0 de, I 0 H2N
0.1 Date recue/Date received 2023-03-06
To a stirred solution of diethyl 2-bromomalonate Int-A (100 g, 420.0 mmol) in acetonitrile (1000 mL), N-methyl-l-phenylmethanamine SM-1 (101.8 g, 840.0 mmol) was added at 0 C and mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was filtered, filtrate was concentrated under reduced pressure to afford B (200 g, crude) as a yellow oil. LCMS (ESI): m/z 280.15 [M++1].
Synthesis of diethyl 2-(methylamino)malonate (Int-C):
To a stirred solution of compound B (125 g, 447.4 mmol) in Et0Ac (1250 mL), 10%
Pd/C (50% wet, 15 g) was added at RT and stirred under hydrogen atmosphere (balloon) for 12 h. After consumption of the starting material (by TLC), mixture was filtered through a pad of celite and washed with Et0Ac (600 mL). The filtrate was concentrated under reduced pressure to afford compound C (84 g, crude) as a light yellow oil. LCMS (ESI): m/z 190 [M++1].
Synthesis of diethyl 1,3-dimethy1-5-oxopyrrolidine-2,2-dicarboxylate (1):
To a stirred solution of compound C (50.0 g, 264.4 mmol) and methyl (E)-but-2-enoate (29.1 mL, 291.0 mmol) in Et0H (300 mL) was added Na0Et (60 mL, 21% solution in Et0H) in sealed tube. The reaction mixture was heated at 80 C for 12 h. After consumption of the starting material (by TLC), reaction mixture was concentrated under reduced pressure, diluted with water (250 mL) and extracted with Et0Ac (3 x 400 mL). The combined organic layer was washed with brine (300 mi.), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 15-30% Et0Ac/ hexane to afford 1(40.0 g, 58%) as a brown oil. LCMS (ESI): m/z 258.25 [M++11.
Synthesis of 2-(ethoxycarbony1)-1,3-dimethyl-5-oxopyrrolidine-2-carboxylic acid (2):
To a stirred solution of 1 (40.0 g, 155.6 mmol) in Et0H (200 mL), KOH (8.70 g, 155.6 mmol) in H20 (50 mL) was added drop wise at RT and stirred for 4 h. After consumption of the starting material (by TLC), mixture was concentrated under reduced pressure, diluted with water (300 mL) and extracted with diethyl ether (400 mL). The aqueous layer was acidified with 1N HCl (pH-2) and extracted with Et0Ac (4 x 300 mL). The Combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure to afford 2 (30.0 g, crude) as a yellow solid. LCMS (ESI): m/z 230.2 [M++1].
Date recue/Date received 2023-03-06
To a stirred solution of compound 2 (30 g, 131.0 mmol) in DCM (500 mL), (2,4-dimethoxyphenyl)methanamine, (26 g, 157.2 mmol), HATU (74.6 g, 196.5 mmol) and DIPEA
(39.2 mL, 229.2 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h.
After consumption of the starting material (by TLC), reaction was quenched with water (200 mL) and extracted with DCM (3 x 300 mL). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-50% Et0Ac/hexane to afford compound 3 (30.0 g, 60%) as a yellow oil. LCMS (ESI): m/z 379.2 [M++11.
Synthesis of N-(2,4-dimethoxybenzy1)-2-(hydroxymethyl)-1,3-dimethyl-5-oxopyrrolidine-2-carboxamide (4) To a stirred solution of compound 3 (30.0 g, 79.2 mmol) in THF/Me0H (3:1, 120 mL), NaBH4 (15.0 g, 396.8 mmol) was added at 0 C portion wise over period of 10 min. Reaction mixture was stirred at RT for 4 h. After consumption of the starting material (by '1tC), reaction mixture was diluted with water (300 mL) and extracted with Et0Ac (3 x 300 mL).
The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 4 (24.0 g, crude) as a colourless sticky oil. LCMS
(ESI): m/z 337.2 [W+11.
Synthesis of 2-(2,4-dimethoxybenzy1)-5,8-dimethy1-2,5-diazaspiro[3.410ctane-1,6-dione (5):
To a stirred solution of triphenylphosphine (24.3 g, 92.85 mmol) in THF (150 mi.), diisopropyl azodicarboxylate (14.4 g, 71.4 mmol) was added dropwise at 0 C
and stirred at same temperature for 20 min. then the solution of compound 4 (24.0 g, 71.4 mmol) in THF
(150 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (200 mL) and extracted with Et0Ac (3 x 250 mL). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-70% Et0Ac/hexane to afford compound 5 (17.0 g, 74%) as a colorless oil. LCMS (ESI): m/z 319.1 [M++11.
Date recue/Date received 2023-03-06
To a stirred solution of compound 5 (17.0 g, 53.4 mmol) in acetonitrile/1120 (4:1, 250 mL) solution of ceric ammonium nitrate (58.6 g, 106.9 mmol) in H20 (50 mL) was added drop-wise at 0 C and stirred reaction mixture at RT for 5 h. After consumption of the starting material (by TLC), mixture was concentrated under reduced pressure. The residue was purified by reverse phase column chromatography to afford compound 6 (3.0 g, 33%) as a white solid.
LCMS (ESI): m/z 169.0 [M++1].
Synthesis of 2-(5,8-dimethy1-1,6-dioxo-2,5-diazaspiro[3.4]octan-2-y1)acetamide (DI & DJ):
To a stirred solution of compound 6 (1.2 g, 7.10 mmol) in acetonitrile (60 mL), Cs2CO3 (4.64 g, 14.2 mmol), 2-bromoacetamide (1.17 g, 8.52 mmol) were added at RT and stirred for 12 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through pad of celite, filtrate was concentrated under reduced pressure. The crude product was purified by column chromatography using 2-5% Me011/ DCM to afford mixture of compounds DI & DJ (0.85 g) as an off white solid. The mixture was purified by preparative HPLC
followed by chiral HPLC to afford DI (0.12 g) and DJ (0.078 g) as an off white solid.
DI: 1H NMR: (400 MHz, DMSO-d6): 8 7.48 (brs, 1H), 7.13 (brs, 1H), 3.85 - 3.82 (d, J= 9.2 Hz, 2H), 3.68 - 3.67 (d, J= 6 Hz, 1H), 3.41 - 3.40 (d, J= 6.4 Hz, 1H), 2.71 (s, 3H), 2.61 - 2.57 (m, 1H),2.49-2.41 (m, 1H), 1.97-1.90 (m, 1H), 1.12 - 1.11 (d, J = 6.8 Hz, 3H).
LCMS (ESI):
m/z 226.0 [W+1]. HPLC: 99.17%. Chiral HPLC: 99.49%. Column: YMC Chiral Amylose-SA (250*4.6 mm, 51..im); Mobile Phase A: MTBE: 11-A (80 &0.1% CH3COOH); Mobile Phase B: IPA(20%); Flow rate: 1.0 mL/min; Retention time: 15.43.
DJ: 1H NMR (400 MHz, DMSO-d6): 8 7.48 (brs, 1H), 7.13 (brs, 1H), 3.85 - 3.82 (d, J= 9.2 Hz, 2H), 3.68 -3.67 (d, J= 6 Hz, 1H), 3.41 -3.40 (d, J= 6.4 Hz, 1H), 2.71 (s, 3H), 2.63 -2.57 (m, 1H),2.47-2.41 (m, 1H), 1.97-1.90 (m, 1H), 1.12 - 1.11 (d, J = 6.8 Hz, 3H).
LCMS (ESI):
m/z 226.0 [M++1]. HPLC: 98.2%. Chiral HPLC: 98.77%. Column: YMC Chiral Amylose-SA
(250*4.6 mm, 5 m); Mobile Phase A: MTBE:TFA (0.1% CH3COOH); Mobile Phase B:
IPA(20%); Flow rate: 1.0 mL/min; Retention time: 19.20.
Date recue/Date received 2023-03-06
EtO0C COOEt ACOOEt ________________ EtO0C COOEt Step-S '1-- Step-1 0 N COOEt Y HN
Br F 0 Na0EgEt0H 41 Int-A W HA Int-B F
fiLome I
F
Int-C
TBSO,A,-NH 2 .---.c..CONHR
Step-4 4.7.0NHR NH, Step-2 Step-3 0 N COOEt Step-5 1 .0 N COOEt 0 N
KOH, Me0H DIAD, TPP 4 HATU, 4 T HrmHe4(; 1.4 4 II 2 D DI PcENIA , THE
Rn Threonine Step-6 0 N . ..---c\N Ø NH2 jytt,OH 0 N Hz sLep-A IcILNH, S")-13' ITEirjNH2 Tf=f¨ 7 TBAF, 00 THF NH, A Cbz-CI NHCbz TBSCI NHCbz Pd/C
OK
D
F DL
Synthesis of Diethyl 2((4-fluorophenyl)amino)malonate (Int-B):
To a stirred solution of diethyl 2-bromomalonate, It-1 (100.0 g, 420.0 mmol) in DMF
(500 mL), 4-fluoroaniline (46.7 g, 420.0 mmol) was added at 0 C and stirred at 100 C for 12 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water, solid obtained was filtered and dried to afford compound 1 (95.0 g, 84%) as a light brown solid. LCMS (ESI): m/z 270.10 [M++1].
Synthesis of diethyl 1-(4-fluorophenyI)-3-methyl-5-oxopyrrolidine-2,2-dicarboxylate (1):
To a stirred solution of compound Irit-B (25.0 g, 92.9 mmol) and methyl (E)-but-2-enoate C (10.8 mL, 102.1 mmol) in Et0H (100 mL) was added Na0Et (25 mL, 21%
solution in Et0H) in sealed tube. The reaction mixture was stirred at 80 C for 12 h. After consumption of the starting material (by TLC), reaction mixture was concentrated under reduced pressure, diluted with water (250 mL) and extracted with Et0Ac (3 x 300 mL). The combined organic layer was washed with brine (300 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 15-30%
Et0Ac/
hexane to afford 2 (12.0 g, 38%) as a brown oil. LCMS (ESI): m/z 338.0 [M++1].
Date recue/Date received 2023-03-06
To a stirred solution of 1 (11.0 g, 32.6 mmol) in Et0H (40 mL), KOH (2.73 g, 48.9 mmol) in H20 (10 mL) was added drop wise at RT and stirred for 12 h. After consumption of the starting material (by TLC), mixture was concentrated under reduced pressure, diluted with water (200 mL) and extracted with diethyl ether (200 mL). The aqueous layer was acidified with IN HC1 (p11-2) and extracted with Et0Ac (5 x 200 mL). Combined organic layer was washed with brine (300 mI,), dried over Na2SO4 and concentrated under reduced pressure to afford 2 (8.0 g, 80%) as a yellow solid. LCMS (ESI): m/z 310.0 [M++1].
Synthesis of ethyl 2-0(25,3R)-1-amino-3-((tert-butyldimethylsilyl)oxy)-1-oxobutan-2-yflcarbamoyl)-1-(4-fluorophenyl)-3-methyl-5-oxopyrrolidine-2-carboxylate (3A/3B):
To a stirred solution of compound 2 (4 g, 12.94 mmol) in DCM (50 mL), Int-D
(3.3 g, 14.23 mmol), HATU (7.37 g, 19.41 mmol) and DIPEA (5.6 mL, 32.35 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), reaction was quenched with water (200 mL) and extracted with DCM (3 x 200 mL).
The combined organic layer was washed with brine (250 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 30-80% Et0Ac/hexane to afford compound 3A (3.0 g, 44%) and 3B (2.8 g, 41%) as a yellow oil. LCMS (ESI): m/z 524.20 [M++1].
Synthesis of N-42S,3R)-1-amino-3-((tert-butyldimethylsilyl)oxy)-1-oxobutan-2-y1)-1-(4-fluoropheny1)-2-(hydroxymethyl)-3-methyl-5-oxopyrrolidine-2-carboxamide (4A):
To a stirred solution of compound 3A (3.0 g, 5.73 mmol) in THF/Me0H (3:1,20 mL), NaBH4 (1.08 g, 28.65 mmol) was added at 0 C portion wise over period of 10 min. Reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (20 mL) and extracted with Et0Ac (3 x 20 mL). The combined organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 4A (2.64 g, 96%) as a yellow oil.
LCMS (ESI):
m/z 482.3 [M++1].
Date recue/Date received 2023-03-06
To a stirred solution of compound 3B (2.8 g, 5.35 mmol) in THF/Me0H (3:1, 20 mL), NaBH4 (2 g, 53.53 mmol) was added at 0 C portion wise over period of 10 min.
Reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (20 mL) and extracted with Et0Ac (3 x 20 mL). The combined organic layer was washed with brine (30 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 4B (2.38 g, 92%) as a yellow oil.
LCMS (ESI):
m/z 482.3 [M++1].
Synthesis of (25,3R)-3-((tert-butyldimethylsilyl)oxy)-2-(5-(4-fluoropheny1)-8-methyl-1,6-dioxo-2,5-diazaspiro[3.41octan-2-y1)butanamide (5A):
To a stirred solution of triphenylphosphine (2.1 g, 8.26 mmol) in THF (10 mL), diisopropyl azodicarboxylate (1.67 g, 8.26 mmol) was added dropwise at 0 C
and stirred at same temperature for 20 min. then the solution of compound 4A (2.64 g, 5.50 mmol) in THF(15 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (50 mL) and extracted with Et0Ac (3 x 50 mL). The combined organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated under reduced pressure to afford crude compound which was purified by column chromatography using 0-30 % Acetone in DCM as eluent to afford 5A
(1.9 g, 76%) as a yellow oil. LCMS (ESI): m/z 464.05 [M+1j+.
Synthesis of (2S,3R)-3-((tert-butyldimethylsilyl)oxy)-2-(5-(4-fluoropheny1)-8-methyl-1,6-dioxo-2,5-diazaspiro[3.41octan-2-y1)butanamide (5B):
To a stirred solution of triphenylphosphine (1.94 g, 7.42 mmol) in THF (10 mL), diisopropyl azodicarboxylate (1.5 g, 7.42 mmol) was added dropwise at 0 C and stirred at same temperature for 20 min. then the solution of compound 4B (2.38 g, 4.94 mmol) in THF(15 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (50 mL) and extracted with Et0Ac (3 x 50 mL). The combined organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated under reduced pressure to afford crude compound which was purified by column chromatography using 0-30 % Acetone in DCM as eluent to afford 5B
(1.6 g, 69%) as a yellow oil. LCMS (ESI): m/z 464.10 [M++1].
Date recue/Date received 2023-03-06
To a stirred solution of compound 5A (1.9 g, 4.1 mmol) in THF (20 mL) 1BAF (1M
in THF (1.6 g, 6.15 mmol) was added portion-wise at RT and reaction mixture was heated at 60 C
for 1 h. After consumption of the starting material (by TLC), reaction mixture was diluted with brine (15 mL) and extracted with DCM (3 x 15 mL). The combined organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound DK (0.2 g, 14%) as a white solid. LCMS (ESI): m/z 350.15 1M++11.
Synthesis of: (2S,3R)-2-(5-(4-fluorop heny1)-8-methy1-1,6-dioxo-2,5-diazas piro [3.4] oc tan-2-y1)-3-hydroxybutanamide (DL):
To a stirred solution of compound 5B (1.6 g, 3.45 mmol) in THF (20 mL) TBAF
(1M in THF,(1.6 g, 6.15 mmol) was added portion-wise at RT and reaction mixture was heated at 60 C at RT for 1 h. After consumption of the starting material (by TLC), reaction mixture was diluted with brine (15 mL) and extracted with DCM (3 x 15 mL). The combined organic layer was washed with brine (20 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound DL (0.15 g, 14%) as a white solid.
DK: 111NMR (400 MHz, DMSO-d6): 6 7.39 (brs, 1H), 7.26-7.18 (m, 4H), 7.03 (brs,1H), 4.94 (d, J= 6.0 Hz, 1H), 3.91-3.89 (d, J= 7.2 Hz, 1H), 3.84 - 3.79 (m, 1H), 3.76 -3.74 (d, J= 7.2 Hz, 1H), 3.34-3.27 (d, J = 7.2 Hz,1H), 2.71 - 2.68 (m, 1H), 2.63 - 2.57 (m, 1H), 2.26 - 2.20 (m, 1H),1.22-1.20 (d, J= 6.8 Hz, 3H), 1.04-1.02 (d, J= 6.0 Hz, 3H). LCMS
(ESI): m/z 349A5 [M -1-11. HPLC: 95.77%. Chiral HPLC: 100%. Column: YMC ChiralArt Cellulose-Sc (250*4.6 mm, 51.1m); Mobile Phase A: Hexane:DEA:1'1A (0.1% DEA & 0.1%TFA);
Mobile Phase B: IPA(40%); Flow rate: 1.0 mL/min; Retention time: 7.615.
DL: 11-INMR (400 MHz, DMSO-d6): 6 7.38 (brs, 1H), 7.30-7.23 (m, 4H), 7.08 (brs,1H) ,4.77-4.75 (d, J= 5.2 Hz, 1H), 3.98-189 (m, 3H), 3.34-3.32 (m, 111), 2.71 -2.68 (m, 1H), 2.63 - 2.57 (m, 1H), 2.26 - 2.20 (m, 1H),1.22-1.20 (d, J= 6.8 Hz, 3H), 1.04-1.02 (d, J=
6.0 Hz, 3H).
LCMS (ESI): m/z 350.10 [M++11. HPLC: 96.62%. Chiral HPLC: 100%. Column: YMC
ChiralArt Cellulose-Sc (250*4.6 mm, 51.im); Mobile Phase A: Hexane:DEA:II A
(0.1% DEA
& 0.1%TFA); Mobile Phase B: IPA(40%); Flow rate: 1.0 mL/min; Retention time:
7.644.
Date recue/Date received 2023-03-06
0 COOEt 0 R HOx_c Step-1 õ.õ1---\,irr:Iy000Et Step-2 COOEt Step-3 COOEt N COOEt reCPBA 0 N COOEt 0 CDOEt BnNH2, N CONHBn Na0Et/Et0H
Step-4 TBSO Step-5 TBSOz..
OH Step-6 TBSO HO
COOEt 9 Step-7 NP
TD BmSACp1 , 0 N cONHBn NaBB4 CONHBn TPP, DIAD, N
THF \ 0 TBAF, THE 0 N\
DN
1.1*-OH Step-A it CI
SOCI, DMF
rEt N
EtO0C COOEt Step-B EtOoc step-c EtO0C yCOOEt Step-D 0 h-N I 00E1 Br ,Frj olp ACN E100C \ H2, Pd/C, Et0Ac SM-1 SM-2 3 4 Pyridine, DCM
Synthesis of (E)-but-2-enoyl chloride (2):
Thionyl chloride (118 inL) was added in stirred solution of (E)-but-2-enoic acid, compound 1 (125.0 g, 1.45 mmol) and DMF (1- 2 drops) at 0 C and stirred reaction mixture at 50 C for 2 h. After consumption of the starting material, reaction mixture was concentrated under reduced pressure to afford compound 2 (100 g, crude) as a colourless oil.
Synthesis of diethyl 2-(benzyl(methyl)amino)malonate (3):
To a stirred solution of diethyl 2-bromomalonate SM-1 (100 g, 420.0 mmol) in acetonitrile (1L), N-methyl-1-phenylmethanarnine SM-2 (101.8 g, 840.0 mmol) was added at 0 C and reaction mixture stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was filtered and filtrate was concentrated under reduced pressure to afford 3 (200 g, crude) as a yellow oil. LCMS (ESI): m/z 280.15 [M++1].
Synthesis of diethyl 2-(methylamino)malonate (4):
To a stirred solution of compound 3 (125.0 g, 447.4 mmol) in Et0Ac (1250 inL), 10%
Pd/C (50% wet, 15 g) was added at RT and stirred under hydrogen atmosphere (balloon) for 12 h. After consumption of the starting material (by TLC), the reaction mixture was filtered through a pad of celite and washed with Et0Ac (600 mL). The filtrate was concentrated under reduced pressure to afford compound 4 (84 g, crude) as a light yellow oil.
LCMS (ES1): m/z 190 [M4+1].
Date recue/Date received 2023-03-06
To a stirred solution of compound 4 (87 g, 460 mmol) in DCM (500 mL), (E)-but-enoyl chloride, 2 (57.7 g, 552 mmol), pyridine (72.6 g, 920 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (700 mL) and extracted with DCM (3 x 600 mL). The combined organic layer was washed with brine (700 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% Et0Ac/hexane to afford compound 5 (61 g, 51.6%) as a light yellow liquid.
Synthesis of diethyl 2-(N,3-dimethyloxirane-2-carboxamido)malonate (6):
To a stirred solution of compound 5 (61.0 g, 237 mmol) in DCM (700 mL), mCPBA
(122.7 g, 711.2 mmol) was added at 0 C and reaction mixture was stirred at RT
for 12 h. After consumption of the starting material (by TLC), reaction mixture was quenched with ice cold water (700 mL) and extracted with DCM (3 x 600 mL). The combined organic layer was washed with brine (700 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-30% Et0Ac/ hexane to afford compound 6 (43.0 g, 66.3%) as a colourless liquid. LCMS (ES1): m/z 273.95[M++1].
Synthesis of diethyl 4-hydroxy-1,3-dimethy1-5-oxopyrrolidine-2,2-dicarboxylate (7):
To a stirred solution of compound 6 (43.0 g, 153.6 mmol) in Et0H (420 mL), Na0Et (20.9 g, 307.3 mmol) was added at RT and stirred for 1 h. After consumption of the starting material (by TLC), the reaction mixture was concentrated under reduced pressure. Reaction mixture was diluted with water (500 mL) and extracted with DCM (3 x 400 mL).
The combined organic layer was washed with 1N HC1 solution (500 mL) and brine (500 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 7 (40.0 g, crude) as a light brown liquid.
Synthesis of ethyl 2-(benzylcarbamoy1)-4-hydroxy-1,3-dimethy1-5-oxopyrrolidine-carboxylate (8):
To a stirred solution of compound 7 (25.0 g, 91.5 mmol) in DCM (250 mL), pyridine (22 mL, 274.5 mmol), benzyl amine (12.7 g, 118.6 mmol) were added at 0 C and reaction mixture was stirred at RT for 12 h. After consumption of the starting material (by TLC), the reaction mixture was quenched with water (300 mL) and extracted with DCM (3 x 300 mL).
Date recue/Date received 2023-03-06
Synthesis of ethyl 2-(benzylcarbamoy1)-4-((tert-butyldimethylsilyl)oxy)-1,3-dimethy1-5-oxopyrrolidine-2-carboxylate (9):
To a stirred solution of compound 8 (12.0 g, 35.9 mmol) in DCM (250 mL), TBDMS-Cl (5.95 g, 39.5 mmol), imidazole (3.66 g, 53.8 mmol) was added portion wise at 0 C and stirred at RT for 16 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (100 mL) and extracted with DCM (3 x 200 mL). The combined organic layer was washed with brine (150 mL), dried over Na2SO4 and concentrated under reduced pressure. The Crude product was purified by column chromatography using 10-40%
Et0Ac/
hexane to afford to afford compound 9 (15 g, 93%) as a pale yellow solid. LCMS
(ES!): m/z 449.25 [M++1].
Synthesis of N-benzy1-4-((tert-butyldimethylsilyl)oxy)-2-(hydroxymethyl)-1,3-dimethyl-5-oxopyrrolidine-2-carboxamide (10):
To a stirred solution of compound 9 (15.0 g, 33.4 mmol) in THF/Me0H (3:1, 160 mL), NaB1-14 (6.3 g, 167,4 mmol) was added at 0 C portion wise over period of 10 min and stirred reaction mixture at RT for 4 h. After consumption of the starting material (by TLC), reaction mixture was diluted with water (150 mL) and extracted with Et0Ac (3 x 200 mL).
The combined organic layer was washed with brine (150 mL), dried over Na2SO4 and concentrated under reduced pressure to afford compound 10 (10.0 g, crude) as a pale yellow oil. LCMS
(ESI): m/z 407.25 [M++1].
Synthesis of 2-benzy1-7-((tert-butyldimethylsilyl)oxy)-5,8-dimethy1-2,5-diazaspiroP.4]octane-1,6-dione (11):
To a stirred solution of triphenylphosphine (8.3 g, 32.0 mmol) in TI-IF (100 mL), di-isopropyl azodicarboxylate (6.4 g, 32.0 mmol) was added drop wise at 0 C and stirred at same temperature for 20 min. Then the solution of compound 10 (10.0 g, 24.6 mmol) in THF (100 mL) was added and stirred reaction mixture at RT for 12 h. After consumption of the starting material (by TLC), mixture was diluted with water (100 mL) and extracted with DCM (3 x 200 mL). The combined organic layer was washed with brine (150 mL), dried over Na2SO4 and concentrated under reduced pressure. The Crude product was purified by column Date recue/Date received 2023-03-06
Synthesis of 2-benzyl-7-hydroxy-5,8-dimethy1-2,5-diazaspiro[3.410ctane-1,6-dione (DM &
DN):
To a stirred solution of compound 11(8.0 g, 20.61 mmol) in THF (150 mL), '113AF
(1M, solution in THF, 30 mL, 30.9 mmol) was added at RT and stirred at 50 C
for 4 h. After consumption of the starting material (by TLC), the reaction mixture was concentrated under reduced pressure, diluted with water (100 mi.) and extracted with DCM (3 x 150 mL). The combined organic layer was washed with brine (150 mL), dried over Na2SO4 and concentrated under reduced pressure. The crude product was purified by column chromatography using 10-40% Et0Ac/hexane to afford mixture of compounds DM & DN (3.0 g) as an off white solid.
The mixture was purified by preparative HPLC followed by chiral HPLC to afford DM (0.14 g) and DN (0.14 g) as an off white solid.
DM: 1H NMR: (400 MHz, DMSO-d6): 6 7.42 - 7.23 (m, 5H), 4.48 (s, 2H), 4.28 -4.22 (m, 1H), 4.20 (s, 1H), 3.48 -3.44 (m, 1H), 3.42 (s, 2H), 2.82 (s, 3H), 1.38- 1.37 (d, J = 6.8 Hz, 3H). LCMS (ESI): m/z 275.0 [M++1]. HPLC: 98.92%. Chiral HPLC: 100%. Column:
ChiralPak IC (250*4.6 mm, 51.tm); Mobile Phase A: CO2; Mobile Phase B:
IPA(40%):0.1 %
NH3; Flow rate: 3.0 mL/min; Retention time: 4.48.
DN: 1H NMR : (400 MHz, DMSO-d6): 6 7.42 - 7.23 (m, 5H), 4.48 (s 2H), 4.26 -4.25 (m, 1H), 4.20 (s, 1H), 3.47 - 3.46 (m, 1H), 3.42 (s, 2H), 2.82 (s, 3H), 1.38 -1.37 (d, J = 6.4 Hz, 3H). LCMS (ESI): m/z 275.05 [M++11. HPLC: 99.56%. Chiral HPLC: 100%. Column:
ChiralPak IC (250*4.6 mm, 51.tm); Mobile Phase A: CO2; Mobile Phase B:
IPA(40%):0.1 %
NH3; Flow rate: 3.0 mL/min; Retention time: 4.48.
X-Ray Crystal Structure Determination of AA-2 Compound AA-2 (40 mg) was dissolved in methanol (2 mL) at 40 C, allowed to cool to room temperature and was left standing for 72 h to form crystals. Crystals were isolated and examined with a microscope. Single crystal X-ray diffraction analysis also was performed.
The results of the crystal X-ray diffraction analysis are shown in Table 1.
Table 1 shows detailed data for the crystal structure, and shows that the crystals are orthorhombic and have a P212121 space group. Analysis of the single crystal diffraction data shows that the absolute configuration of the carbon at the Spiro center is (S), as determined by the PLATON technique Date recue/Date received 2023-03-06
(D¨cH3 HN/ )N1 Table 1 Empirical Formula C151-118N203 Formula weight 274.31 Temperature 294(2) K
Wavelength 0.71073 A
Crystal system Orthorhombic Space group P212121 Unit cell dimensions a = 6.348(3) A a=90 .
b = 9.402(4) A 13=90 .
c = 47.10(2) A y=90 .
Volume 2811(2) A3 Density (calculated) 1.296 Mg/m3 Absorpotion coefficient 0.091 mm-1 F(000) 1168 Crystal size 0.440 x 0.320 x 0.220 mm3 Date recue/Date received 2023-03-06
Index ranges -7<=h<=8, -5<=k<=12, -62<=1<=48 Reflections collected 15836 Independent reflections 6953 [R(int) = 0.03451 Completeness to 0 = 25.242 99.4 %
Refinement method Full-matrix least-squares on F2 Data / restraints / parameters 6953 / 0 / 371 Goodness-of-fit on F2 0.979 Final R indices [I>2a(I)] R1 = 0.0600, wR2 = 0.1495 R indices (all data) RI = 0.1117, wR2 = 0.1733 Absolute structure parameter 0.1(5) Largest cliff. peak and hole 0.145 and -0.188 A-3 Measurement Bruker D8 QUEST PHOTON-100 Detector Software Used SHELXTL-PLUS
Consequently, compound AA-1 would have the (R) configuration at the Spiro center as follows:
Date recue/Date received 2023-03-06
)N HN
>
Following the above procedures, the following compounds and stereoisomers thereof were or are prepared. It will be appreciated by a person of skill in the art that for the structures shown, additional stereoisomers such as diastereomers and/or enantiomers are included in the present disclosure.
Date recue/Date received 2023-03-06
Compound Structure AB
NH
O N
AC z-H2N,õ
AD OH
EtO0C
EtO0C N 0 AE NH
EtO0C
EtO0C N 0 AF NH
EtO0C
HOOC N
AG .µNH2 HOOC N
H2N,,, NH
AI
H2N,, NH
N
H
= NH
HOOC¨a AK Ph NH
v H
Date recue/Date received 2023-03-06
AL ---, EtO0C>C.
AM Ph AN
HO
NH
N
AO, AP 0 NI..
..10H
AQ, AR
H2NJ eiz\ NH2 NI"
= "OH
kite AS, AT
NI
/0 =
Ph AV, AW 0 H2N ¨N H2 NI..
d 0 Date recue/Date received 2023-03-06
0'7-N = . ioH
RP
F
AZ, BA 0 \
NI = =
\110H
F
F
BB, BC H 0 õN
N
\
NI.. H2 N ='OH
BD, BE
NH
\
NI"
o'7".N ="OH
H
BF, BG H 0 1.---N===,..---N,..\¨NH2 CD'''''''NH ="OH
BH, BI H 0 c =\---NH2 NI ' =
e¨N = = IOH
H
. BJ, BK 1 0 H2N \N,..---NH2 N "10H
H
BL, BM 0 H2N \ \
NI..
"10H
Date recue/Date received 2023-03-06
H
BO
(-)c N
_ H
BP
HN
NH
H
BQ
N
0.7N I 0 H
BR
H
Ph Ph 0 0 Ph BT, BU 0 0 HN )cNi =
= .10H
BV, BW 0\\
HN )c1\11 =
OH
Date recue/Date received 2023-03-06
CA, CB
0\\ 0 )"µ NH
HN
= .10H
CC, CD 0\\ 0 /
HN )cNi.=
..10H
CE, CF
N \o CG, CH
o N
\ 0 CI, CJ 0 1\1' )cN-PMB
CK, CL 0 N-PMB
CM, CN
HN )cN-PMB
Date recue/Date received 2023-03-06
HN )cN-PMB
CO, CR 0 HN cN-PMB
CS, CT 0\\
N\ ,)N-PMB
CU, CV 0 HN )cN-Bn CW, CX 0\
-N> XN8n CY, CZ 0 NN -Bn DA, DB 0\\
HN
N
''OH
DC, DD 0 HN )cN
DE, DF
HN/ Xl.\r\N-) )/
Date recue/Date received 2023-03-06
\
DI, DJ
N \ho DK, DL 0 DM, DN
HO
0 \O
B. POSITIVE EMOTIONAL LEARNING (PEL) TEST
This example demonstrates the positive emotional learning (PEL) test.
Experiments were conducted as described in Burgdorf et al., "The effect of selective breeding for differential rates of 50-kHz ultrasonic vocalizations on emotional behavior in rats,"
Devel. Psychobiol., 51:34-46 (2009). Rat 50-kHz ultrasonic vocalization (hedonic USVs) is a validated model for the study of positive affective state and is best elicited by rough-and-tumble play. 50-kHz ultrasonic vocalizations have previously been shown to be positively correlated with reward and appetitive social behavior in rats, and to reflect a positive affective state.
The PEL assay measures the acquisition of positive (hedonic) 50-kHz ultrasonic vocalizations (USVs) to a social stimulus, heterospecific rough and tumble play stimulation.
Heterospecific rough-and-tumble play stimulation was administered by the experimenter's right hand. One hour after administration of test compound or vehicle negative control (0.5%
sodium carboxymethyl cellulose in 0.9% sterile vehicle), animals received 3 min of heterospecific rough-and-tumble play that consisted of alternating 15 sec blocks of heterospecific play and 15 sec of no-stimulation. High frequency ultrasonic vocalizations Date recue/Date received 2023-03-06
The experiment had a vehicle control group, where a typical maximum effect was lower than 6.0 50 kHz USVs per 15 seconds.
C. NMDAR AGONIST ASSAYS
Assays were conducted as described by Moskal et al., "GLYX-13: a monoclonal antibody-derived peptide that acts as an N-methyl-D-aspartate receptor modulator,"
Neuropharmacology, 49, 1077-87, 2005. These studies were designed to determine if the test compounds act to facilitate NMDAR activation in NMDAR2A, NMDAR2B, NMDAR2C or NMDAR2D expressing HEK cell membranes as measured by increases in [31-INK-801 binding.
In the assay, 300 ps of NMDAR expressing HEK cell membrane extract protein was preincubated for 15 minutes at 25 C in the presence of saturating concentrations of glutamate (50 M) and varying concentrations of test compound (1x10-15M ¨ 1x10-7M), or 1 mM glycine.
Following the addition of 0.3 Ci of [31-11MK-801 (22.5 Ci/mmol), reactions were again incubated for 15 minutes at 25 C (nonequilibrium conditions). Bound and free [3H]MK-801 were separated via rapid filtration using a Brandel apparatus.
In analyzing the data, the DPM (disintegrations per minute) of [31-I]MK-801 remaining on the filter were measured for each concentration of test compound or for 1 mM glycine. The DPM values for each concentration of a ligand (N=2) were averaged. The baseline value was determined from the best fit curve of the DPM values modeled using the GraphPad program and the log(agonist) vs. response(three parameters) algorithm was then subtracted from all Date recue/Date received 2023-03-06
The tables below summarize the results for the wild type NMDAR agonists NMDAR2A, NMDAR2B, NMDAR2C, and NMDAR2D, and whether the compound is not an agonist (-), is an agonist (+), or is a strong agonist (+-F), where column A
is based on the %
maximal [31-1]MK-801 binding relative to 1 mM glycine (- =0; < 100% = +; and >
100% = ++);
and column B is based on log ECso values (0 = -; > 1x10-9 M (e.g., -8) = +;
and < 1x10-9 M
(e.g., -10) = -HF).
Compound A B A B
AA-2 - - + ++
AA-1 - - + -H-AA-rac - - + ++
CC - - + ++
CD + -1-1- + ++
BX - - + -H-BY - - -CE - - - - , CF - - + ++
CG - - + ++
CH - - -CM -CN + -H- ++
CO + -H- -CP + -H- + -1-CU + ++
CV + -H- + ++
DG + -H- -DH + -H- -HE -H-CW -H- -HI-CX + -H- + -H-CY + -H- -CZ + + - -CS -HE ++
CT + -H- -DA - - - -Date recue/Date received 2023-03-06
DE + -H- +-I-DF + -H- -1-DC + -H- -H-DD - - + ++
DI + -H- +-I-DJ _ _ + ++
DK -I¨F -I- -DL + -I¨F - -DM + + - -DN + -H- - _ CA - - - -CB - - + ++
CI + -H- -I- +-I-CJ + -H- -H- -H-CK - - -CL + -H- -I- -H-Compound A B A B
AA-2 - - + -H-AA-1 - - + +
AA-rac - - + ++
D. PHARMACOKINETICS
Sprague Dawley rats were dosed intravenously using a normal saline formulation containing 2 mg/kg of the compounds identified in the below table. The table below summarizes the results of the IV pharmacokinetics.
AUCiast Cl , Co 11/2 Vss Compound (hr) (hr*ng/ (mL/min/k (ng/mL) (1-11(0 mL) 0 AA-2 1986.7 3370 1.25 9.82 0.54 AA-1 2335.11 3433.21 1.12 9.69 0.76 AA-rac 5791 6297 3.31 5.28 0.56 CC 7934.77 2125.34 2.11 15.65 0.5 CB 4320.17 1316.92 1.77 25.31 1.2 Date recue/Date received 2023-03-06
AUCIast CSF Brain TRIM( C111311 Compound (hr) (ng/mL) (hr*ng/ CM/11 CMIII %F
mL) (ng/mL) (ng/mL) AA-2 0.25 11342.1 17262.4 1476.3 1107.2 100 AA-1 0.33 8922.48 15492.47 N/A N/A 90 AA-rac 0.67 5809 17793 1466.9 951 57 CC 0.42 190.93 701.13 0 0 7 CB 0.5 143.28 297.31 31.02 7.38 5 CI 0.25 5051.91 5059.74 1113.94 996.66 97 CL 0.25 1799.14 1429.34 866.42 707.6 37 E. NOVEL OBJECT RECOGNITION (NOR) Experiments were conducted as described previously (Hirst et al., 2006). Rats were habituated to the NOR test box twice a day for two consecutive days prior to testing. Each habituation session was comprised of a 3 mm exposure to the empty test box (46 x 30 x 45 cm), followed by 1 min in the side annex (13 x 30 x 45 cm) and a further 3 min in the test box, thereby mimicking the test protocol. A vehicle dose was administered prior to one of the habituation sessions on each habituation day. The NOR test comprised two test sessions, Ti and T2, each lasting for 3 min. On the first test day, Ti, rats were habituated to the empty test box for 3 min, and then placed in the side annex for approximately 1 min whilst two identical test objects were placed in the test arena equally spaced to each other and the side walls. The rat was then returned to the test arena and allowed to freely explore the objects for a further 3 min. At the end of the test session the rat was returned to its home cage.
Following a 24 h inter-trial interval, the recall trial (T2) was conducted. T2 was similar to Ti except that one of the 'familiar' objects was substituted for a novel one of a similar size and color but different shape.
Date recue/Date received 2023-03-06
Ti and T2 trials were recorded and files were scored remotely by an investigator blinded to the treatments. Exploration was scored as time spent sniffing or licking the objects, when the nose was in contact with the object and was moving (i.e. when the animal was sniffing). Sitting on the object or next to it with the nose directed away was not classed as exploration.
For the Compound AA-2 study, Compound AA-2 (1 mg/kg, oral gavage) or vehicle (CMC Saline, oral gavage) was administered 60 minutes before Ti. Animals were assessed for total exploration time of novel vs. familiar objects in T2 (Figure 1A), difference in exploration time between familiar and novel object in T2 (Figure 1B) and discrimination index (d2) [= (time spent exploring the novel object in T2 - time spent exploring the familiar object in T2)/total exploration time of both objects in T21 (Figure 1C).
F: PORSOLT ASSAY
A non-clinical in vivo pharmacology study (Porsolt assay) was performed to measure antidepressant-like effects. A negative control (0.5% sodium carboxymethyl cellulose in 0.9%
sterile saline vehicle) and a positive control (fluoxetine) are shown for comparison against test compound. The study allowed for the evaluation of the effects of each compound on the Porsolt forced swim test as assessed by the rats' response (reduced floating time) during a 5-minute swimming test.
Male 2-3 month old Sprague Dawley rats were used (Harlan, Indianapolis, IN).
Rats were housed in Lucite cages with aspen wood chip bedding, maintained on a 12:12 light:dark cycle (lights on at 5 AM), and given ad libitum access to Purina lab chow (USA) and tap water throughout the study.
The Porsolt forced swim test adapted for use in rats was performed as described by Burgdorf et al., (The long-lasting antidepressant effects of rapastinel (GLYX-13) are associated with a metaplasticity process in the medial prefrontal cortex and hippocampus.
Neuroscience 308:202-211, 2015). Animals were placed in a 46 cm tall x 20 cm in diameter clear glass tube filled to 30 cm with tap water (23 1 C) for 15 min on the first day (habituation) and 5 min on the subsequent test day. Positive control fluoxetine was dosed 3 times (24 h, 5 h and 1 h) prior Date recue/Date received 2023-03-06
Animals received a 15 min habituation session 1 day before the 5 min test.
Water was changed after every other animal. Animals were videotaped, and floating time as defined as the minimal amount of effort required to keep the animals head above water was scored offline by a blinded experimenter with high inter-rater reliability (Pearson's r> .9).
The results for test compounds are shown in the table below. Each compound tested at dose level shown. Significance vs. vehicle group for each experiment is marked. A compound marked "Yes" was found to be statistically significant (p <= 0.05) from vehicle at dose level shown. A compound marked "No" was not statistically significant from vehicle.
Data was averaged for test compound and vehicle groups (N approximately 8 per group) and the percent reduction in floating for group treated with test compound relative to group treated with vehicle is shown.
1 h post-dose 24 h post-dose Compound Dose Significance reduction Dose Significance reduction (mg/kg) vs. vehicle in float (mg/kg) vs.
vehicle in float time time Fluoxetine 20 Yes 54% N/A N/A N/A
AA-2 0.1 Yes 51.5% 0.1 Yes 77.80%
AA-1 0.1 Yes 74.4% 0.1 Yes 69.50%
AA-rac 0.1 Yes 77.4% 0.1 Yes 74.40%
G. BENNETT ASSAY
The Bennett model of mechanical analgesia is used to assess the analgesic effects of compounds as measured by paw withdrawal threshold. Bennett GJ, Xie YK, "A
peripheral mononeuropathy in rat that produces disorders of pain sensation like those seen in man," Pain 33:87-107, 1988. Sciatic nerve chronic constriction nerve injury surgery is performed on animals with testing for analgesic response once animals have recovered from surgery but still exhibit a low threshold of paw withdrawal after application of von Frey filaments. Vehicle animals receive the surgery and then receive vehicle rather than test compound. Animals were tested 1 hr, 24 h and 1 wk post-test compound or vehicle administration.
Male 2-3 month old Sprague Dawley rats were used. Harlan was the supplier for all studies. Rats were housed in Lucite cages with aspen wood chip bedding, maintained on a Date recue/Date received 2023-03-06
Rats were anesthetized using inhaled isoflurane (2.5%). Sciatic nerve chronic constriction nerve injury surgery was performed as previously described (Bennett and Xie, 1988). An incision (-1.5 cm in length) was made with a scalpel blade dorsally through skin on the right hind limb, parallel and posterior to femur. Using a small pointed hemostat, the biceps femoris and gluteus superficialis muscles were separated. Using curved blunt forceps, the common sciatic nerve was isolated and exposed. For the mechanical analgesia studies, the whole sciatic nerve was ligated. Using hemostats/forceps and chromic gut (5-0), the nerve was loosely ligated with a square knot; 3 ligatures, 1 mm apart were placed on the nerve. The ligatures were tightened to the point that the suture did not slide up or down the nerve. This protocol resulted in a partial loss-of-function of the nerve. Testing occurred approximately 2 weeks post-surgery.
During testing, rats were acclimated to the surface of a suspended wire mesh grid (1 cm X 1 cm, with the wire being 0.3 cm in diameter) for 15-20 min. Starting from the smallest, each Von Frey filament was pressed perpendicularly to the plantar surface of the affected (ipsilateral) hind paw until slightly bent and then held for 6 second. If an obvious hind paw withdrawal or a flinching behavior immediately after the withdrawal of the filament was not observed, the next larger filament was used in the same manner. In case of a response, a lower filament was used. This was repeated until six responses were collected.
For all studies, animals were baselined prior to study start to test for allodynia (defined as a paw withdrawal threshold under 5). A subset of animals was tested with gabapentin (150 mg/kg, PO) to ensure at least 50% analgesia. Once it was confirmed animals were ready for study initiation, animals were balanced across groups. All study investigators were blind to treatment conditions. Animals were dosed with 0.1, 1, 10, or 30 mg/kg of test compound via oral gavage (PO), control sets of animals were dosed with gabapentin (150 mg/kg, PO) or vehicle (0.5% Na-CMC in 0.9% sterile saline, PO). Testing occurred 1 h post-dosing with animals retested 24 hrs and 1 week post-dosing. The percent analgesia calculations for each animal were made using the following equation: % analgesia = [(log(x) ¨ y) /
((log (z) ¨ y)] *
100, where x = the paw withdrawal threshold for the drug-treated animal in grams, y = the average of the log(x) values for the vehicle treated group, and z = the paw withdrawal threshold Date recue/Date received 2023-03-06
38.1% at 1 h, 24.3% at 24 h, and 41.4% at 1 wk; and for 30 mg/kg dose: 24.4%
at 1 h, 8.7% at 24 h, and 34.5% at 1 wk. The study had a gabapentin control group, where example (typical) gabapentin control values for 150 mg/kg dose are 72% at 1 h, 16% at 24h, and 0% at 1 wk. For the study, gabapentin was confirmed effective (demonstrating at least 50%
analgesia at 1 h post-administration). Gabapentin was not different from vehicle and resulted in no analgesia (<5%) at 24 h and 1 week post-administration.
EQUIVALENTS
Those skilled in the art will recognize, or be able to ascertain using no more than routine experimentation, many equivalents to the specific embodiments of the disclosure described herein.
Date recue/Date received 2023-03-06
Claims (33)
X
N ¨ R3 m (I) or a pharmaceutically acceptable salt, and/or a stereoisomer, wherein:
m is 2 and n is 1, or m is 0 and n is 2;
X is 0 or S;
R1 is selected from the group consisting of hydrogen, -C1-C6alkyl, -C(0)-Ci-C6alkyl, -Cl-C6alkylene-C3-C6cycloalkyl, and phenyl;
R2 is independently selected for each occurrence from the group consisting of hydrogen, and -Cl-C6alkyl;
R3 is selected from the group consisting of hydrogen, -Ci-C6alkyl, -C(0)-R31, -C(0)-0-Ci-C6alkyl, and phenyl;
R31 is selected from the group consisting of hydrogen, and -Cl-C6alky1;
wherein any aforementioned Cl-C6alkyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from ¨C(0)NR1Rb, hydroxyl, -SH, phenyl, and halogen; and any aforementioned phenyl, independently for each occurrence, is optionally substituted by one, two or three substituents each independently selected from -Ci-C3a1koxy, and halogen;
R4 is independently selected for each occurrence from the group consisting of hydrogen, hydroxyl, -Ci-C4alkyl, --NRaRb, -N(Ra)-phenyl, -N(Ra)-Ci-C6a1ky1ene-pheny1, -I\T(Ra)-C(0)-Cl_C6alkyl, -and -N(Ra)-C(0)-0-C1_C6a1ky1;
IV and R1) are each independently for each occurrence selected from the group consisting of hydrogen, and -CI-C4alkyl;
le is independently selected for each occurrence from the group consisting of hydrogen and phenyl; and two R6moieties together with the carbon to which they are attached form a carbonyl or thiocarbonyl moiety.
Date recue/Date received 2023-03-06
x R4R4R5 R1- N X. N ¨ R3 R2) R2R2 R2 Y (Ia), wherein Y is 0 or S.
N ¨R3 R1 0 (lb).
each occurrence from the group consisting of hydrogen, hydroxyl, methyl, -NH2, H , y' 401 N
u H'I\V Me'N N 4 , and H-
Date reçue/Date received 2023-03-06
O yRa sl:Zb o ,Ra =N
iRb 0 Ra ,Fta 0 ,Ra OH I Nkb oH = SH ; / __ Ns and -.)¨NSIRb ;
wherein:
R66 is selected from the group consisting of hydrogen and -Ci-C3alkoxy; and W
and Rb are each independently selected for each occurrence from the group consisting of hydrogen and -Ci-C6alkyl.
Date reçue/Date received 2023-03-06 o o CH, cH3 HN N HN N
>
Ph z-- Ph :-.
_ ON
H2N,,./\ NH )N HO
\( ' cNH NH NH
r, /
N , N
,.., H ,,L) , 0 H
, , , , 0 0 NH.
H2N NH2 H2N NH2 0õ7---N
\
-.--"OH
NI ,= NI- ____ .---N1 -=-r1OH 07-1/ \:10H
H
0 Nle0 , , 0 H2Nc NH2 \
7,10H
0 ) zo II N N 0d H
Ph F
, , , H2Nc. NH2 NI =
"--N -10H 0,..õ.
,N NH2 --N NH2 \ \
Ni.= F 0 10H
NI-,=-*-N
H H
, , , 0 j\-11 A _______________ H 0 0 I NI" NH2 N
\
NI" NH2 H2N \ \N,.. __ NH2 -..---N e 0 H Ce-HN -HN
*
(:)0 H2N N ,c 41 H2N >0 HN
N NH
.---N N
,.., 0 N
..., H 0 , %., H 0 ,..., µ.., H n , , s' , Date reçue/Date received 2023-03-06 __ 11 Ph EN11.* >0 HN 0 ONN ___________ /
N N
,."---N 0 ,,--N 0 ,- _,L Ph k., H 0 ..., H 0 Ph 0 0 , , N
0\\ 0 0 0 HN/ )c\NI== HN YI.NrµNi=,t \ _____ =.1 \ ___________ OH
, , , N __ \
0 0 11 R\ 0 /
HN )c,N1., OH HN )cNi,.
\ _____ =., \ ______ =10H
, , , H2N 41 (D, 0 S
N -N )N-PMB / / ____ N N-PMB HN N-PMB
\ \ ____________ \ __ ,..,."-N
%., \ 0 0 0 0 , , S
0\ 0 0\
HN )N-PMB HN> )cN-PMB -N
, , \ ).N-PMB HIN)' )cN-Bn , \ ___________ \ \
, 0\ 0 0 -N )N-Bn 0 r-N .)N-Bn HN\ eõ,, ,,i1õ,N, HNhcN-\
\ / NH2 0 0 '''OH 0 0 , , , , N=.=1 =.10H
/ > )c HN N HN XI N---\
\ 0 N
0 0 0 0 H2N F , and , , , N
kJ \ 0 , Date reçue/Date received 2023-03-06 or a pharmaceutically acceptable salt and/or a stereoisomer thereof, wherein PMB is p-methoxybenzyl and Bn is benzyl.
/
HN NH HN N¨PMB
and 0 or a pharmaceutically acceptable salt, and/or a stereoisomer thereof, wherein the PMB is p-methoxybenzyl.
0¨CH3 HN )N
or a pharmaceutically acceptable salt thereof.
cell dimensions a = 6.348(3) A, a = 90 b = 9.402(4) A, [3 = 90 c = 47.10(2) A, y = 90';
space group = P212121;
Volume = 2811(2) A;
Date recue/Date received 2023-03-06 crystal system = orthorhombic; and molecules per unit cell = 8.
and a pharmaceutically acceptable excipient.
depression, Alzheimer's disease, attention deficit disorder, schizophrenia, or anxiety;
a migraine;
neuropathic pain;
Date recue/Date received 2023-03-06 traumatic brain injury; or a neurodevelopmental disorder related to synaptic dysfunction.
Date recue/Date received 2023-03-06
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