AU2008253573A1 - Fragmentation profile based authentification of protein source - Google Patents
Fragmentation profile based authentification of protein source Download PDFInfo
- Publication number
- AU2008253573A1 AU2008253573A1 AU2008253573A AU2008253573A AU2008253573A1 AU 2008253573 A1 AU2008253573 A1 AU 2008253573A1 AU 2008253573 A AU2008253573 A AU 2008253573A AU 2008253573 A AU2008253573 A AU 2008253573A AU 2008253573 A1 AU2008253573 A1 AU 2008253573A1
- Authority
- AU
- Australia
- Prior art keywords
- subset
- proteins
- sample
- protein
- iii
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
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- 102000004169 proteins and genes Human genes 0.000 title claims description 176
- 238000013467 fragmentation Methods 0.000 title claims description 12
- 238000006062 fragmentation reaction Methods 0.000 title claims description 12
- 238000000034 method Methods 0.000 claims description 78
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 45
- 241000251468 Actinopterygii Species 0.000 claims description 31
- 239000012634 fragment Substances 0.000 claims description 26
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- 235000013372 meat Nutrition 0.000 claims description 6
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- IZWSFJTYBVKZNK-UHFFFAOYSA-N lauryl sulfobetaine Chemical compound CCCCCCCCCCCC[N+](C)(C)CCCS([O-])(=O)=O IZWSFJTYBVKZNK-UHFFFAOYSA-N 0.000 claims description 4
- 238000012163 sequencing technique Methods 0.000 claims description 4
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- 241001147156 Lates niloticus Species 0.000 claims description 3
- IZWSFJTYBVKZNK-UHFFFAOYSA-O N-dodecyl-N,N-dimethyl-3-ammonio-1-propanesulfonic acid Chemical compound CCCCCCCCCCCC[N+](C)(C)CCCS(O)(=O)=O IZWSFJTYBVKZNK-UHFFFAOYSA-O 0.000 claims description 3
- 230000007775 late Effects 0.000 claims description 3
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- DIROHOMJLWMERM-UHFFFAOYSA-N 3-[dimethyl(octadecyl)azaniumyl]propane-1-sulfonate Chemical compound CCCCCCCCCCCCCCCCCC[N+](C)(C)CCCS([O-])(=O)=O DIROHOMJLWMERM-UHFFFAOYSA-N 0.000 claims description 2
- TUBRCQBRKJXJEA-UHFFFAOYSA-N 3-[hexadecyl(dimethyl)azaniumyl]propane-1-sulfonate Chemical compound CCCCCCCCCCCCCCCC[N+](C)(C)CCCS([O-])(=O)=O TUBRCQBRKJXJEA-UHFFFAOYSA-N 0.000 claims description 2
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- BHATUINFZWUDIX-UHFFFAOYSA-O dimethyl-(3-sulfopropyl)-tetradecylazanium Chemical compound CCCCCCCCCCCCCC[N+](C)(C)CCCS(O)(=O)=O BHATUINFZWUDIX-UHFFFAOYSA-O 0.000 claims description 2
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- KCXFHTAICRTXLI-UHFFFAOYSA-N propane-1-sulfonic acid Chemical compound CCCS(O)(=O)=O KCXFHTAICRTXLI-UHFFFAOYSA-N 0.000 claims description 2
- ZIRURAJAJIQZFG-UHFFFAOYSA-N 1-aminopropane-1-sulfonic acid Chemical compound CCC(N)S(O)(=O)=O ZIRURAJAJIQZFG-UHFFFAOYSA-N 0.000 claims 1
- -1 Dimethyloctylammonio Chemical group 0.000 claims 1
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- YVNQAIFQFWTPLQ-UHFFFAOYSA-O [4-[[4-(4-ethoxyanilino)phenyl]-[4-[ethyl-[(3-sulfophenyl)methyl]amino]-2-methylphenyl]methylidene]-3-methylcyclohexa-2,5-dien-1-ylidene]-ethyl-[(3-sulfophenyl)methyl]azanium Chemical compound C1=CC(OCC)=CC=C1NC1=CC=C(C(=C2C(=CC(C=C2)=[N+](CC)CC=2C=C(C=CC=2)S(O)(=O)=O)C)C=2C(=CC(=CC=2)N(CC)CC=2C=C(C=CC=2)S(O)(=O)=O)C)C=C1 YVNQAIFQFWTPLQ-UHFFFAOYSA-O 0.000 description 4
- 229940098773 bovine serum albumin Drugs 0.000 description 4
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- BDAGIHXWWSANSR-UHFFFAOYSA-N methanoic acid Natural products OC=O BDAGIHXWWSANSR-UHFFFAOYSA-N 0.000 description 4
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- OSWFIVFLDKOXQC-UHFFFAOYSA-N 4-(3-methoxyphenyl)aniline Chemical compound COC1=CC=CC(C=2C=CC(N)=CC=2)=C1 OSWFIVFLDKOXQC-UHFFFAOYSA-N 0.000 description 2
- XTWYTFMLZFPYCI-KQYNXXCUSA-N 5'-adenylphosphoric acid Chemical compound C1=NC=2C(N)=NC=NC=2N1[C@@H]1O[C@H](COP(O)(=O)OP(O)(O)=O)[C@@H](O)[C@H]1O XTWYTFMLZFPYCI-KQYNXXCUSA-N 0.000 description 2
- XTWYTFMLZFPYCI-UHFFFAOYSA-N Adenosine diphosphate Natural products C1=NC=2C(N)=NC=NC=2N1C1OC(COP(O)(=O)OP(O)(O)=O)C(O)C1O XTWYTFMLZFPYCI-UHFFFAOYSA-N 0.000 description 2
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- 238000007738 vacuum evaporation Methods 0.000 description 2
- WKALLSVICJPZTM-UHFFFAOYSA-N 3-[decyl(dimethyl)azaniumyl]propane-1-sulfonate Chemical compound CCCCCCCCCC[N+](C)(C)CCCS([O-])(=O)=O WKALLSVICJPZTM-UHFFFAOYSA-N 0.000 description 1
- 241000264351 Argyrops spinifer Species 0.000 description 1
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- 102000007079 Peptide Fragments Human genes 0.000 description 1
- 108010033276 Peptide Fragments Proteins 0.000 description 1
- 241000936940 Plectropomus Species 0.000 description 1
- 102000016611 Proteoglycans Human genes 0.000 description 1
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- QAOWNCQODCNURD-UHFFFAOYSA-L Sulfate Chemical compound [O-]S([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-L 0.000 description 1
- 241000384512 Trachichthyidae Species 0.000 description 1
- 241000851507 Upeneus tragula Species 0.000 description 1
- 241001463139 Vitta Species 0.000 description 1
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- TUJKJAMUKRIRHC-UHFFFAOYSA-N hydroxyl Chemical compound [OH] TUJKJAMUKRIRHC-UHFFFAOYSA-N 0.000 description 1
- 238000002372 labelling Methods 0.000 description 1
- 230000029226 lipidation Effects 0.000 description 1
- 239000007788 liquid Substances 0.000 description 1
- 239000011159 matrix material Substances 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 230000011987 methylation Effects 0.000 description 1
- 238000007069 methylation reaction Methods 0.000 description 1
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- 229920000642 polymer Polymers 0.000 description 1
- 229920001184 polypeptide Polymers 0.000 description 1
- 102000035123 post-translationally modified proteins Human genes 0.000 description 1
- 108091005626 post-translationally modified proteins Proteins 0.000 description 1
- 235000004252 protein component Nutrition 0.000 description 1
- 238000000734 protein sequencing Methods 0.000 description 1
- 238000000275 quality assurance Methods 0.000 description 1
- 238000003908 quality control method Methods 0.000 description 1
- 235000020995 raw meat Nutrition 0.000 description 1
- 230000007017 scission Effects 0.000 description 1
- 229910052709 silver Inorganic materials 0.000 description 1
- 239000004332 silver Substances 0.000 description 1
- 229910001961 silver nitrate Inorganic materials 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 239000011734 sodium Substances 0.000 description 1
- 238000004611 spectroscopical analysis Methods 0.000 description 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
- G01N33/6851—Methods of protein analysis involving laser desorption ionisation mass spectrometry
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Chemical & Material Sciences (AREA)
- Hematology (AREA)
- Urology & Nephrology (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Biomedical Technology (AREA)
- Immunology (AREA)
- Microbiology (AREA)
- Medicinal Chemistry (AREA)
- Biotechnology (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Biophysics (AREA)
- Optics & Photonics (AREA)
- Food Science & Technology (AREA)
- Cell Biology (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2008253573A AU2008253573A1 (en) | 2007-05-17 | 2008-05-02 | Fragmentation profile based authentification of protein source |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2007902650 | 2007-05-17 | ||
| AU2007902650A AU2007902650A0 (en) | 2007-05-17 | Sample Identification Method | |
| AU2008253573A AU2008253573A1 (en) | 2007-05-17 | 2008-05-02 | Fragmentation profile based authentification of protein source |
| PCT/AU2008/000614 WO2008141358A1 (fr) | 2007-05-17 | 2008-05-02 | Authentification, basée sur le profil de fragmentation, d'une source de protéine |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AU2008253573A1 true AU2008253573A1 (en) | 2008-11-27 |
Family
ID=40031299
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2008253573A Abandoned AU2008253573A1 (en) | 2007-05-17 | 2008-05-02 | Fragmentation profile based authentification of protein source |
Country Status (2)
| Country | Link |
|---|---|
| AU (1) | AU2008253573A1 (fr) |
| WO (1) | WO2008141358A1 (fr) |
Families Citing this family (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DE102013104866A1 (de) * | 2013-05-11 | 2014-11-27 | Kesseböhmer Holding e.K. | Behältnis und Verfahren zum Auslösen einer Antriebsvorrichtung des Behältnisses |
Family Cites Families (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| DK589785A (da) * | 1985-12-18 | 1987-06-19 | Samuelsson Ernst Gunnar | Peptidpraeparat, fremgangsmaade til fremstilling deraf samt anvendelse af peptidpraeparatet |
| US6864099B2 (en) * | 2000-05-05 | 2005-03-08 | Purdue Research Foundation | Affinity selected signature peptides for protein identification and quantification |
| WO2002065126A2 (fr) * | 2001-02-15 | 2002-08-22 | Auburn University | Utilisation de troponine i comme proteine de marquage d'especes pour la speciation de la viande dans des produits crus et traites thermiquement |
-
2008
- 2008-05-02 WO PCT/AU2008/000614 patent/WO2008141358A1/fr not_active Ceased
- 2008-05-02 AU AU2008253573A patent/AU2008253573A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| WO2008141358A1 (fr) | 2008-11-27 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| MK4 | Application lapsed section 142(2)(d) - no continuation fee paid for the application |