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AU2002366918A1 - Biological sequence information processing method and device - Google Patents

Biological sequence information processing method and device

Info

Publication number
AU2002366918A1
AU2002366918A1 AU2002366918A AU2002366918A AU2002366918A1 AU 2002366918 A1 AU2002366918 A1 AU 2002366918A1 AU 2002366918 A AU2002366918 A AU 2002366918A AU 2002366918 A AU2002366918 A AU 2002366918A AU 2002366918 A1 AU2002366918 A1 AU 2002366918A1
Authority
AU
Australia
Prior art keywords
information processing
processing method
sequence information
biological sequence
biological
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002366918A
Inventor
Hiroki Arakawa
Kosuke Takagi
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Biomatics Inc
Original Assignee
Biomatics Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Biomatics Inc filed Critical Biomatics Inc
Publication of AU2002366918A1 publication Critical patent/AU2002366918A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G06—COMPUTING OR CALCULATING; COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F16/00—Information retrieval; Database structures therefor; File system structures therefor
    • G06F16/90—Details of database functions independent of the retrieved data types
    • G06F16/903—Querying
    • G06F16/90335—Query processing
    • G06F16/90339—Query processing by using parallel associative memories or content-addressable memories
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Theoretical Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medical Informatics (AREA)
  • Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Chemical & Material Sciences (AREA)
  • Databases & Information Systems (AREA)
  • Computational Linguistics (AREA)
  • Data Mining & Analysis (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
AU2002366918A 2001-12-11 2002-12-11 Biological sequence information processing method and device Abandoned AU2002366918A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
JP2001377632A JP3723767B2 (en) 2001-12-11 2001-12-11 Biological sequence information processing method and apparatus
JP2001-377632 2001-12-11
PCT/JP2002/012944 WO2003054744A1 (en) 2001-12-11 2002-12-11 Biological sequence information processing method and device

Publications (1)

Publication Number Publication Date
AU2002366918A1 true AU2002366918A1 (en) 2003-07-09

Family

ID=19185547

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002366918A Abandoned AU2002366918A1 (en) 2001-12-11 2002-12-11 Biological sequence information processing method and device

Country Status (3)

Country Link
JP (1) JP3723767B2 (en)
AU (1) AU2002366918A1 (en)
WO (1) WO2003054744A1 (en)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US12006539B2 (en) * 2020-03-17 2024-06-11 Western Digital Technologies, Inc. Reference-guided genome sequencing

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPS6270974A (en) * 1985-09-24 1987-04-01 Nec Corp Text search engine and its control system
JP2715465B2 (en) * 1988-08-31 1998-02-18 日本電気株式会社 Symbol string matching device
JPH03296169A (en) * 1990-04-13 1991-12-26 Nec Corp Array retrieving device
JP2865831B2 (en) * 1990-08-31 1999-03-08 株式会社日立製作所 Parallel string search device
JPH04259068A (en) * 1991-02-14 1992-09-14 Fujitsu Ltd Pattern collating device for data base
JPH06110927A (en) * 1992-09-28 1994-04-22 Nec Corp Parallel retrieval system for data in extra-large record

Also Published As

Publication number Publication date
JP2003216615A (en) 2003-07-31
JP3723767B2 (en) 2005-12-07
WO2003054744A1 (en) 2003-07-03

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase