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AU2001284351A1 - Method for haplotyping by mass spectrometry - Google Patents

Method for haplotyping by mass spectrometry

Info

Publication number
AU2001284351A1
AU2001284351A1 AU2001284351A AU8435101A AU2001284351A1 AU 2001284351 A1 AU2001284351 A1 AU 2001284351A1 AU 2001284351 A AU2001284351 A AU 2001284351A AU 8435101 A AU8435101 A AU 8435101A AU 2001284351 A1 AU2001284351 A1 AU 2001284351A1
Authority
AU
Australia
Prior art keywords
mass spectrometry
haplotyping
snps
single nucleotide
relates
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2001284351A
Inventor
Ivo Glynne Gut
Doris Lechner
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Consortum National De Recherche En Genomique (CNRG)
Original Assignee
Centre National de Genotypage
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Centre National de Genotypage filed Critical Centre National de Genotypage
Publication of AU2001284351A1 publication Critical patent/AU2001284351A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6858—Allele-specific amplification

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
  • Electron Tubes For Measurement (AREA)

Abstract

The invention relates to a method for performing haplotyping of multiple single nucleotide polymorphisms (SNPs) that uses allele specific PCR and mass spectrometry analysis;
AU2001284351A 2000-07-24 2001-07-23 Method for haplotyping by mass spectrometry Abandoned AU2001284351A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
EP00402112A EP1176212A1 (en) 2000-07-24 2000-07-24 Method for haplotyping by mass spectrometry
EP00402112 2000-07-24
PCT/IB2001/001646 WO2002008462A1 (en) 2000-07-24 2001-07-23 Method for haplotyping by mass spectrometry

Publications (1)

Publication Number Publication Date
AU2001284351A1 true AU2001284351A1 (en) 2002-02-05

Family

ID=8173780

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2001284351A Abandoned AU2001284351A1 (en) 2000-07-24 2001-07-23 Method for haplotyping by mass spectrometry

Country Status (8)

Country Link
US (1) US20040053260A1 (en)
EP (2) EP1176212A1 (en)
AT (1) ATE338829T1 (en)
AU (1) AU2001284351A1 (en)
CA (1) CA2417201A1 (en)
DE (1) DE60122899T2 (en)
ES (1) ES2271066T3 (en)
WO (1) WO2002008462A1 (en)

Families Citing this family (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7435541B2 (en) 2000-05-23 2008-10-14 Sequenom, Inc. Restriction enzyme genotyping
CA2409774A1 (en) * 2000-05-23 2001-11-29 Variagenics, Inc. Methods for genetic analysis of dna to detect sequence variances
US20030124592A1 (en) * 2001-10-24 2003-07-03 Bioprofile, Llc Methods for detecting genetic haplotypes by interaction with probes
DE602004021902D1 (en) 2003-01-17 2009-08-20 Univ Boston haplotype analysis
EP1536021A1 (en) * 2003-11-27 2005-06-01 Consortium National de Recherche en Genomique (CNRG) Method for HLA typing
CN103717751A (en) * 2011-05-19 2014-04-09 塞昆纳姆股份有限公司 Products and methods for multiplex nucleic acid identification
JP6445426B2 (en) 2012-05-10 2018-12-26 ザ ジェネラル ホスピタル コーポレイション Method for determining nucleotide sequence
CA2938080A1 (en) 2014-01-27 2015-07-30 The General Hospital Corporation Methods of preparing nucleic acids for sequencing
EP3286327B1 (en) 2015-04-24 2021-11-10 Agena Bioscience, Inc. Multiplexed method for the identification and quantitation of minor alleles and polymorphisms
CN114350766A (en) 2015-04-24 2022-04-15 基纳生物技术有限公司 Parallel method for detecting and quantifying minor variants
CN111334583B (en) * 2020-01-19 2023-03-31 中国检验检疫科学研究院 Method for identifying aedes species based on PCR-MS mass spectrometry scanning

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
ES2091976T3 (en) * 1991-06-20 1996-11-16 Hoffmann La Roche PERFECTED METHODS FOR THE AMPLIFICATION OF NUCLEIC ACID.
US5556772A (en) * 1993-12-08 1996-09-17 Stratagene Polymerase compositions and uses thereof
WO1997047766A1 (en) * 1996-06-10 1997-12-18 University Of Utah Research Foundation Rapid, accurate identification of dna sequence variants by electrospray mass spectrometry
US5856104A (en) * 1996-10-28 1999-01-05 Affymetrix, Inc. Polymorphisms in the glucose-6 phosphate dehydrogenase locus
US6476208B1 (en) * 1998-10-13 2002-11-05 Genset Schizophrenia associated genes, proteins and biallelic markers
US6475736B1 (en) * 2000-05-23 2002-11-05 Variagenics, Inc. Methods for genetic analysis of DNA using biased amplification of polymorphic sites

Also Published As

Publication number Publication date
ES2271066T3 (en) 2007-04-16
CA2417201A1 (en) 2002-01-31
EP1303638A1 (en) 2003-04-23
DE60122899D1 (en) 2006-10-19
US20040053260A1 (en) 2004-03-18
EP1176212A1 (en) 2002-01-30
DE60122899T2 (en) 2007-04-05
WO2002008462A1 (en) 2002-01-31
EP1303638B1 (en) 2006-09-06
ATE338829T1 (en) 2006-09-15

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