AU2001242280A1 - Method for detecting cytosine methylation in dna samples - Google Patents

Method for detecting cytosine methylation in dna samples

Info

Publication number: AU2001242280A1
Authority: AU; Australia
Prior art keywords: dna samples; cytosine methylation; detecting cytosine; detecting; methylation
Prior art date: 2000-02-25
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.): Granted

Application number

AU2001242280A

Other versions

AU2001242280B2 (en

Inventor

Kurt Berlin

Alexander Olek

Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)

Epigenomics AG

Original Assignee

Epigenomics AG

Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)

2000-02-25

Filing date

2001-02-23

Publication date

2001-11-15

2000-02-25 Priority claimed from DE10010280A external-priority patent/DE10010280B4/en

2001-02-23 Application filed by Epigenomics AG filed Critical Epigenomics AG

2001-11-15 Publication of AU2001242280A1 publication Critical patent/AU2001242280A1/en

2007-03-01 Application granted granted Critical

2007-03-01 Publication of AU2001242280B2 publication Critical patent/AU2001242280B2/en

2021-02-23 Anticipated expiration legal-status Critical

Status Ceased legal-status Critical Current

Links

AU2001242280A 2000-02-25 2001-02-23 Method for detecting cytosine methylation in dna samples Ceased AU2001242280B2 (en)

Applications Claiming Priority (3)

Application Number	Priority Date	Filing Date	Title
DE10010280.8		2000-02-25
DE10010280A DE10010280B4 (en)	2000-02-25	2000-02-25	Method for the detection of cytosine methylation in DNA samples
PCT/DE2001/000750 WO2001062064A2 (en)	2000-02-25	2001-02-23	Method for detecting cytosine methylation in dna samples

Related Child Applications (1)

Application Number	Title	Priority Date	Filing Date
AU2007202468A Division AU2007202468A1 (en)	1999-06-01	2007-05-30	Method for detecting cytosine methylation in DNA samples

Publications (2)

Publication Number	Publication Date
AU2001242280A1 true AU2001242280A1 (en)	2001-11-15
AU2001242280B2 AU2001242280B2 (en)	2007-03-01

Family

ID=7633311

Family Applications (2)

Application Number	Title	Priority Date	Filing Date
AU4228001A Pending AU4228001A (en)	2000-02-25	2001-02-23	Method for detecting cytosine methylation in dna samples
AU2001242280A Ceased AU2001242280B2 (en)	2000-02-25	2001-02-23	Method for detecting cytosine methylation in dna samples

Family Applications Before (1)

Application Number	Title	Priority Date	Filing Date
AU4228001A Pending AU4228001A (en)	2000-02-25	2001-02-23	Method for detecting cytosine methylation in dna samples

Country Status (9)

Country	Link
US (1)	US7524629B2 (en)
EP (1)	EP1261741B1 (en)
JP (1)	JP4498657B2 (en)
AT (1)	ATE395434T1 (en)
AU (2)	AU4228001A (en)
CA (1)	CA2399281C (en)
DE (2)	DE10010280B4 (en)
ES (1)	ES2307597T3 (en)
WO (1)	WO2001062064A2 (en)

Families Citing this family (37)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
US7611869B2 (en)	2000-02-07	2009-11-03	Illumina, Inc.	Multiplexed methylation detection methods
US8076063B2 (en)	2000-02-07	2011-12-13	Illumina, Inc.	Multiplexed methylation detection methods
US7955794B2 (en)	2000-09-21	2011-06-07	Illumina, Inc.	Multiplex nucleic acid reactions
US7582420B2 (en)	2001-07-12	2009-09-01	Illumina, Inc.	Multiplex nucleic acid reactions
DE10010282B4 (en) *	2000-02-25	2006-11-16	Epigenomics Ag	Method for the detection of cytosine methylation in DNA samples
DE10010281B4 (en) *	2000-02-25	2005-03-10	Epigenomics Ag	Ligase / polymerase method for the detection of cytosine methylation in DNA samples
DE10151055B4 (en)	2001-10-05	2005-05-25	Epigenomics Ag	Method for detecting cytosine methylation in CpG islands
US20110151438A9 (en) *	2001-11-19	2011-06-23	Affymetrix, Inc.	Methods of Analysis of Methylation
DE10160983B4 (en) *	2001-12-05	2004-12-09	Epigenomics Ag	Method and integrated device for the detection of cytosine methylation
US6960436B2 (en) *	2002-02-06	2005-11-01	Epigenomics Ag	Quantitative methylation detection in DNA samples
US7238518B2 (en)	2002-10-04	2007-07-03	Nisshinbo Industries, Inc.	Oligonucleotide-immobilized substrate for detecting methylation
US20060094016A1 (en) *	2002-12-02	2006-05-04	Niall Gormley	Determination of methylation of nucleic acid sequences
US20050009059A1 (en) *	2003-05-07	2005-01-13	Affymetrix, Inc.	Analysis of methylation status using oligonucleotide arrays
US20060134650A1 (en) *	2004-12-21	2006-06-22	Illumina, Inc.	Methylation-sensitive restriction enzyme endonuclease method of whole genome methylation analysis
ES2647483T3 (en)	2005-04-01	2017-12-21	Epigenomics Ag	Improved bisulfite conversion of DNA
AU2006236363B2 (en)	2005-04-15	2012-11-01	Epigenomics Ag	A method for providing DNA fragments derived from a remote sample
US20060292585A1 (en) *	2005-06-24	2006-12-28	Affymetrix, Inc.	Analysis of methylation using nucleic acid arrays
EP3095878A1 (en)	2005-11-17	2016-11-23	Epigenomics AG	Method for the determination of the dna methylation level of a cpg position in identical cells within a tissue sample
US7820385B2 (en) *	2006-03-22	2010-10-26	The United States Of America As Represented By The Department Of Health And Human Services, Centers For Disease Control And Prevention	Method for retaining methylation pattern in globally amplified DNA
US7901882B2 (en)	2006-03-31	2011-03-08	Affymetrix, Inc.	Analysis of methylation using nucleic acid arrays
US8084734B2 (en) *	2006-05-26	2011-12-27	The George Washington University	Laser desorption ionization and peptide sequencing on laser induced silicon microcolumn arrays
WO2008096146A1 (en)	2007-02-07	2008-08-14	Solexa Limited	Preparation of templates for methylation analysis
US20080213870A1 (en) *	2007-03-01	2008-09-04	Sean Wuxiong Cao	Methods for obtaining modified DNA from a biological specimen
WO2008149237A2 (en)	2007-06-08	2008-12-11	Epigenomics Ag	Method for methylation analysis
CN104673888B (en) *	2008-08-15	2017-09-19	卡斯凯德生物体系股份有限公司	Detect nucleic acid
WO2010048337A2 (en)	2008-10-22	2010-04-29	Illumina, Inc.	Preservation of information related to genomic dna methylation
US8110796B2 (en)	2009-01-17	2012-02-07	The George Washington University	Nanophotonic production, modulation and switching of ions by silicon microcolumn arrays
US9490113B2 (en) *	2009-04-07	2016-11-08	The George Washington University	Tailored nanopost arrays (NAPA) for laser desorption ionization in mass spectrometry
EP2309005B1 (en)	2009-08-03	2015-03-04	Epigenomics AG	Methods for preservation of genomic DNA sequence complexity
US20110104695A1 (en)	2009-11-05	2011-05-05	Epigenomics Ag	Methods of predicting therapeutic efficacy of cancer therapy
WO2011100749A2 (en)	2010-02-15	2011-08-18	Cascade Biosystems, Inc.	Methods and materials for detecting viral or microbial infections
US8623616B2 (en)	2010-02-15	2014-01-07	Cascade Biosystems, Inc.	Methods and materials for detecting contaminated food products
EP2536848B1 (en)	2010-02-15	2017-07-19	Cascade Biosystems, Inc.	Methods and materials for detecting genetic or epigenetic elements
US8470533B2 (en)	2010-02-15	2013-06-25	Cascade Biosystems, Inc.	Methods and materials for assessing RNA expression
EP2788505B1 (en)	2011-12-06	2017-08-23	MDxHealth SA	Methods of detecting mutations and epigenetic changes
US20140272967A1 (en)	2013-03-13	2014-09-18	Abbott Molecular Inc.	Systems and methods for isolating nucleic acids
EP2971171A4 (en)	2013-03-14	2016-11-02	Abbott Molecular Inc	Multiplex methylation-specific amplification systems and methods

Family Cites Families (13)

* Cited by examiner, † Cited by third party
Publication number	Priority date	Publication date	Assignee	Title
US6013431A (en) *	1990-02-16	2000-01-11	Molecular Tool, Inc.	Method for determining specific nucleotide variations by primer extension in the presence of mixture of labeled nucleotides and terminators
US5605798A (en) *	1993-01-07	1997-02-25	Sequenom, Inc.	DNA diagnostic based on mass spectrometry
SE501439C2 (en) *	1993-06-22	1995-02-13	Pharmacia Lkb Biotech	Method and apparatus for analyzing polynucleotide sequences
DE19515552A1 (en) *	1995-04-27	1996-10-31	Europ Lab Molekularbiolog	Simultaneous sequencing of nucleic acids
US5728526A (en) *	1995-06-07	1998-03-17	Oncor, Inc.	Method for analyzing a nucleotide sequence
ATE364718T1 (en)	1997-04-01	2007-07-15	Solexa Ltd	METHOD FOR DUPLICATION OF NUCLEIC ACID
US6251594B1 (en) *	1997-06-09	2001-06-26	Usc/Norris Comprehensive Cancer Ctr.	Cancer diagnostic method based upon DNA methylation differences
DE19754482A1 (en) *	1997-11-27	1999-07-01	Epigenomics Gmbh	Process for making complex DNA methylation fingerprints
AUPP312998A0 (en)	1998-04-23	1998-05-14	Commonwealth Scientific And Industrial Research Organisation	Diagnostic assay
WO1999058721A1 (en) *	1998-05-12	1999-11-18	Whitehead Institute For Biomedical Research	Multiplex dna amplification using chimeric primers
JP2002518060A (en) *	1998-06-24	2002-06-25	グラクソグループリミテッド	Nucleotide detection method
DE10010282B4 (en) *	2000-02-25	2006-11-16	Epigenomics Ag	Method for the detection of cytosine methylation in DNA samples
DE10010281B4 (en)	2000-02-25	2005-03-10	Epigenomics Ag	Ligase / polymerase method for the detection of cytosine methylation in DNA samples

2000
- 2000-02-25 DE DE10010280A patent/DE10010280B4/en not_active Expired - Fee Related
2001
- 2001-02-23 US US10/220,090 patent/US7524629B2/en not_active Expired - Fee Related
- 2001-02-23 WO PCT/DE2001/000750 patent/WO2001062064A2/en not_active Ceased
- 2001-02-23 CA CA2399281A patent/CA2399281C/en not_active Expired - Fee Related
- 2001-02-23 DE DE50113970T patent/DE50113970D1/en not_active Expired - Lifetime
- 2001-02-23 EP EP01915054A patent/EP1261741B1/en not_active Expired - Lifetime
- 2001-02-23 AU AU4228001A patent/AU4228001A/en active Pending
- 2001-02-23 ES ES01915054T patent/ES2307597T3/en not_active Expired - Lifetime
- 2001-02-23 AT AT01915054T patent/ATE395434T1/en not_active IP Right Cessation
- 2001-02-23 JP JP2001561142A patent/JP4498657B2/en not_active Expired - Fee Related
- 2001-02-23 AU AU2001242280A patent/AU2001242280B2/en not_active Ceased

Publication	Publication Date	Title
AU2001242280A1 (en)	2001-11-15	Method for detecting cytosine methylation in dna samples
AU2001242279A1 (en)	2001-11-15	Ligase/polymerase method for detecting cytosine methylation in DNA samples
AU4227901A (en)	2001-09-03	Ligase/polymerase method for detecting cytosine methylation in dna samples
AU2001242277A1 (en)	2001-11-15	Method for detecting cytosine methylation in DNA samples
AU2002212188A1 (en)	2002-06-06	Method for determining the degree of methylation of defined cytosines in genomic DNA in the sequence context 5'-CPG-3'
AU2002222614A1 (en)	2002-07-01	Method of detecting polymorphism in dna by using mass spectroscopy
AU2001275650A1 (en)	2002-03-21	Method for detecting cytosine methylations
AU2002311897A1 (en)	2002-11-18	Nucleic acid detection in pooled samples
AU2002363259A1 (en)	2003-07-10	Method for the detection of cytosine methylation in immobilised DNA samples
AU2001241733A1 (en)	2001-09-03	Methods for determining single nucleotide variations
AU4975300A (en)	2000-11-17	Dna melting curve analysis
IL138229A0 (en)	2001-10-31	Method and system for detecting nucleic acids
AU2002224328A1 (en)	2002-04-02	Methods and compositions for detecting cancers associated with methylation of hmlh1promoter dna
AU2003903430A0 (en)	2003-07-17	Method for detection of alkylated cytosine in dna
AU5885100A (en)	2001-01-30	Method for determining dna double-stranded breaks
AU3922802A (en)	2002-05-27	Methods for identifying nucleotides at defined positions in target nucleic acidsusing fluorescence polarization
AU4099001A (en)	2001-09-24	Nucleic acid detection method and system
AU2003230619A1 (en)	2003-09-22	Compositions and methods for detecting nucleic acid methylation
AU2001286756A1 (en)	2002-03-04	Device for identifying the presence of a nucleotide sequence in a dna sample
AU2001239749A1 (en)	2001-08-27	Method for detecting a biological entity in a sample
AU2001270635A1 (en)	2002-02-18	Method for detecting mutations in nucleotide sequences
AU2001275032A1 (en)	2001-12-11	Methods for detecting dna damage and screening for cancer therapeutics
AU2003302685A1 (en)	2004-06-23	Methylation dna detecting method
AU2002227292A1 (en)	2002-06-11	Process for detecting low abundance rna in intact cells
AU2001292922A1 (en)	2002-04-29	Nucleic acid detection