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NZ736697B2 - Synthesis of polycyclic-carbamoylpyridone compounds - Google Patents

Synthesis of polycyclic-carbamoylpyridone compounds Download PDF

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Publication number
NZ736697B2
NZ736697B2 NZ736697A NZ73669715A NZ736697B2 NZ 736697 B2 NZ736697 B2 NZ 736697B2 NZ 736697 A NZ736697 A NZ 736697A NZ 73669715 A NZ73669715 A NZ 73669715A NZ 736697 B2 NZ736697 B2 NZ 736697B2
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New Zealand
Prior art keywords
acid
certain embodiments
solvent
sodium
group
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NZ736697A
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NZ736697A (en
Inventor
Anna Chiu
John Enquist
Nolan Griggs
Christopher Hale
Jochem Van Herpt
Norihiro Ikemoto
Katie Ann Keaton
Matt Kraft
Scott E Lazerwith
Michel Leeman
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Gilead Sciences Inc
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Publication date
Application filed by Gilead Sciences Inc filed Critical Gilead Sciences Inc
Priority claimed from NZ726859A external-priority patent/NZ726859A/en
Publication of NZ736697A publication Critical patent/NZ736697A/en
Publication of NZ736697B2 publication Critical patent/NZ736697B2/en

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    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
    • A61K31/4985—Pyrazines or piperazines ortho- or peri-condensed with heterocyclic ring systems
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K31/00—Medicinal preparations containing organic active ingredients
    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/535—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with at least one nitrogen and one oxygen as the ring hetero atoms, e.g. 1,2-oxazines
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    • C07C213/02—Preparation of compounds containing amino and hydroxy, amino and etherified hydroxy or amino and esterified hydroxy groups bound to the same carbon skeleton by reactions involving the formation of amino groups from compounds containing hydroxy groups or etherified or esterified hydroxy groups
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    • C07C235/00—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms
    • C07C235/70—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms having carbon atoms of carboxamide groups and doubly-bound oxygen atoms bound to the same carbon skeleton
    • C07C235/72—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms having carbon atoms of carboxamide groups and doubly-bound oxygen atoms bound to the same carbon skeleton with the carbon atoms of the carboxamide groups bound to acyclic carbon atoms
    • C07C235/80—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by oxygen atoms having carbon atoms of carboxamide groups and doubly-bound oxygen atoms bound to the same carbon skeleton with the carbon atoms of the carboxamide groups bound to acyclic carbon atoms having carbon atoms of carboxamide groups and keto groups bound to the same carbon atom, e.g. acetoacetamides
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    • C07C237/16—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups having the carbon atoms of the carboxamide groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton being acyclic and unsaturated
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    • C07C237/02—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups having the carbon atoms of the carboxamide groups bound to acyclic carbon atoms of the carbon skeleton
    • C07C237/20—Carboxylic acid amides, the carbon skeleton of the acid part being further substituted by amino groups having the carbon atoms of the carboxamide groups bound to acyclic carbon atoms of the carbon skeleton the carbon skeleton containing six-membered aromatic rings
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    • C07C269/00—Preparation of derivatives of carbamic acid, i.e. compounds containing any of the groups, the nitrogen atom not being part of nitro or nitroso groups
    • C07C269/06—Preparation of derivatives of carbamic acid, i.e. compounds containing any of the groups, the nitrogen atom not being part of nitro or nitroso groups by reactions not involving the formation of carbamate groups
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    • C07D213/02—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
    • C07D213/04—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
    • C07D213/60—Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D213/78—Carbon atoms having three bonds to hetero atoms, with at the most one bond to halogen, e.g. ester or nitrile radicals
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    • C07D309/34—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members
    • C07D309/36—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only ring hetero atom, not condensed with other rings having three or more double bonds between ring members or between ring members and non-ring members with oxygen atoms directly attached to ring carbon atoms
    • C07D309/40—Oxygen atoms attached in positions 3 and 4, e.g. maltol
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    • C07D319/00—Heterocyclic compounds containing six-membered rings having two oxygen atoms as the only ring hetero atoms
    • C07D319/04—1,3-Dioxanes; Hydrogenated 1,3-dioxanes
    • C07D319/06—1,3-Dioxanes; Hydrogenated 1,3-dioxanes not condensed with other rings
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    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/04—Ortho-condensed systems
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    • C07—ORGANIC CHEMISTRY
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    • C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/12—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains three hetero rings
    • C07D471/14—Ortho-condensed systems
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    • C07D471/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/22—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed systems contains four or more hetero rings
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    • C07D487/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
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    • C07D498/12—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms in which the condensed system contains three hetero rings
    • C07D498/14—Ortho-condensed systems
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    • C07D498/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms
    • C07D498/22—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms in which the condensed system contains four or more hetero rings

Abstract

synthetic method for preparing polycyclic-carbamoylpyridone compounds of Formula I where the bridged ring system is formed prior to a final hydroxyl deprotection step. A synthesis of Bictegravir is exemplified.

Description

SYNTHESIS OF POLYCYCLIC-CARBAMOYLPYRIDONE COMPOUNDS This application is a divisional application of New Zealand Application No. 726859 the specification of which as originally filed is incorporated herein in its entirety by nce.
BACKGROUND Field Novel methods of synthesis of polycyclic carbamoylpyridone compounds are disclosed. Intermediates in the synthetic pathway of polycyclic carbamoylpyridone compound are also disclosed.
Description of the Related Art Human immunodeficiency virus infection and related diseases are a major public health m worldwide. Human immunodeficiency virus type 1 (HIV-1) encodes three enzymes which are required for viral replication: reverse transcriptase, protease, and integrase. Although drugs targeting reverse transcriptase and protease are in wide use and have shown effectiveness, particularly when employed in combination, toxicity and development of resistant strains have limited their usefulness la, et al. N. Engl. J Med. (1998) 338:853–860; Richman, D. D. Nature (2001) 410:995–1001). Accordingly, there is a need for new agents that t the replication of HIV and that minimize PXR tion when inistered with other drugs.
Certain polycyclic carbamoylpyridone compounds have been found to have ral ty, as disclosed in . Accordingly, there is a need for synthetic routes for such compounds.
SUMMARY The present invention is directed to a novel synthetic process for preparing the clic carbamoylpyridone compounds of Formula I using the synthetic steps described . The present invention is also ed to particular individual steps of this process and particular individual intermediates used in this process. One embodiment of the present invention provides a process to prepare a Compound of Formula I: (Hal)n A further embodiment provides a process to prepare a Compound of Formula I (Hal)n according to the ing General Scheme 1: R\b ,Rb H N2 0 \/J\OR1 N o (?fQ—(Hann —. _ N \ Emma.» aK1\ \ o / ("R3 0~Ra c4 D—1 RON2 0R2 R10 OR1 R10 0R1 \E 0 O M1' LN1' N \ (Ha|)n _>\ N \ \ H R20 / \ / o n _. 0‘ o R3 O‘Ra N \ N \ O N \ N \ 0 o o q 0 OH General Scheme I wherein the process comprises the following steps: reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K-l to yield E-l; reacting E-l with M-l in the presence of a base to yield F—l; reacting F-l with at least one acid and N—l, or salts or co—crystals thereof, in the presence of a base to yield G-l; reacting G-l under conditions suitable to yield a compound of Formula I; wherein Hal is halogen, which may be the same or different, n is 1, 2, or 3, L is —C(Rc)2-, -C(R°)2C(R°)2—, —C(Rc)2C(R°)2C(R°)2-, or - C(Rc)2C(Rc)2C(Rc)2C(Rc)2—, each R0 is, ndently, hydrogen, halo, hydroxyl or C1—C4alkyl, each Ra, R1, and R2 is, independently, (C1-C4)alkyl, (C2-C10)aryl, or (C2-C10)aryl (C1-C4)alky1.
In some embodiments, each Rb is independently (C1—C4)alkyl.
In some embodiments, each R3, R1, and R2 is, independently, (C1—C4)a1kyl, (C6-C10)aryl, or (C6-C10)aryl (C1-C4)alky1.
Another ment provides a process to prepare a compound of Formula O \ N \ / O OH according to the following General Scheme II: Rt: ,Rb HZN \AOR‘] N 0 (?x/b K>1 N \ \ (Halln —> Kim/GWEN)" —>\ O / ocRa 0~Ra o1 D—1 2 CR2 R10 OR1 RON R10 0R1 f O O I O L NH N-1 N \ NH/\©_(Ha|)n\ N \ \ H R20 O O "@0460" _.
Ra Ra E/N?moL\’/\N \ NHAGMann\ OLW/\N \ N \ OH |/ 0 Q 0 OH General Scheme || n the process ses the following steps: reacting A-l with H—l in the presence of a catalyst, a base, and an ing reagent to yield B—l; reacting B-l with J-l in the presence of an acid to yield C-l; reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K-l to yield E-l; reacting E-l with M-l in the presence of a base to yield F—l; reacting F-l with at least one acid and N—l, in the presence of a base to yield G- reacting G-l under conditions suitable to yield a compound of Formula I; wherein Hal is halogen, n is 1, 2, or 3, L is -C(Rc)2-, -C(Rc)2C(Rc)2-, -C(Rc)2C(R°)2C(R°)2-, or - C(Rc)2C(Rc)2C(R°)2C(Rc)2—, each R0 is, independently, hydrogen, halo, hydroxyl or lkyl, each R3, Rb, R1, and R2 is, independently(C1-C4)alkyl, (C2-C10)ary1, or (C2— C10)aryl (C1—C4)all In some embodiments, Hal is halogen, which may be the same or different.
In some embodiments, each Ra, Rb, R1, and R2 is, independently, (C1- C4)alkyl, (C6—C10)aryl, or (C6-C10)aryl (C1-C4)alkyl.
In some embodiments, J-1 is in the form of a salt or a co-crystal.
In some embodiments, N—l is in the form of a salt or a co-crystal. r embodiment provides a process to prepare a Compound of Formula (Hal)n according to the following General Scheme III: O ,Rb ‘N o H2N\/I\OR1 \ \ K—1 N | n —> N \— H / H I ( a)nI O / O‘Ra O‘Ra E-1 F—1 O o El/Nfg?:oa"N \ NHAGW)\ OWAN \ N \ n L — / H | (Hal)n N \ / 0 O‘Ra 0 OH G—1 I General Scheme III n the process comprises the following steps: reacting B-l with Q—lto yield BB-l reacting BB—l with J—l to yield C—l; reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-1 with K—l to yield E-l; reacting E-l with M-l in the presence of a base to yield F—l; reacting F-lwith at least one acid and N-l, or salts or co-crystals thereof, in the presence of a base to yield G—l; reacting G-l under conditions suitable to yield a compound of Formula I; wherein Hal is halogen, n is 1, 2, or 3, L is -C(Rc)2-, 2C(Rc)2-, -C(Rc)2C(R°)2C(R°)2-, or - C(Rc)2C(Rc)2C(R°)2C(Rc)2—, each R0 is, independently, hydrogen, halo, hydroxyl or C1—C4alkyl, each R3, Rb, Rd, R1, and R2 is, independently, (C1-C4)alkyl, (C2-C10)al‘yl, or (C2- C10)aryl (C1—C4)alkyl.
In some embodiments, Hal is halogen, which may be the same or different.
In some embodiments, each Ra, Rb, Rd, R1, and R2 is, independently, (C1- C4)alkyl, (C6-C10)aryl, or (C6—C10)aryl (C1-C4)alkyl.
In some embodiments, J-1 is in the form of a salt or a stal.
Another embodiment provides a process to prepare a nd of Formula (Hal)n according to the following General Scheme IV: Rb Rh 2 N o Rzokn’oR rHAED—‘Ha't o N \ \ N I\— 0 / _, o O‘Ra 0~Ra C4 D1 O 0‘ R8 o ocRa oLY\N \ N \ SimO \ ———Ha|)n N N \ 17%), O 0tRa 0 OH wherein the process comprises the following steps: reacting C-l with an alkylated formamide acetal to yield D—l; reacting D-l with M-l to yield EE-l; reacting EE-l with K-l to yield F—l; reacting F—l with at least one acid and N—l, in the ce of a base to yield G— reacting G-l under conditions le yield a compound of Formula I; wherein Hal is halogen, nis 1,2, or3, L is —C(Rc)2-, -C(Rc)2C(Rc)2—, —C(Rc)2C(Rc)2C(Rc)2-, or — C(R°)2C(RC)2C(R°)2C(RC)2—, each R6 is, independently, hydrogen, halo, hydroxyl or C1-C4alkyl, each R8, Rb, R1, and R2 is, independently, (C1—C4)alkyl, (C2-C10)aryl, or (C2— C10)aryl (C1—C4)alkyl.
In some embodiments, Hal is halogen, which may be the same or different.
In some embodiments, each Ra, Rb, R1, and R2 is, independently, (C1- C4)alky1, (C6-C10)aryl, or (C6-C10)ary1 (C1-C4)alky1.
In some embodiments, N-1 is in the form of a salt or a co—crystal. r embodiment provides a process to prepare a compound of a R10 01 HOKHAO—WabnN \ N \ \ / o o,Ra according to the following General Scheme V: b b R1 O ‘ ’ N O H N;2 ? \ \ I (Hal)n —» N \ Ha )nI L, / H l ( o / 0‘Ra o\ c-1 D-1 2 0R2 R10 OR1 R OJY R10 0R1 I O o \E O N \ N \ M4 N \ N \ H H | —(Ha|)n —> R20 H | —(Ha|)n —’ / \ / o o 0‘ o Ra \Ra R10 0R1 \E O N \ N \ HO H I (Ha|)n \ / o O‘Ra wherein the process ses the following steps: reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K—l to yield E-l; ng E-l with M—l in the presence of a base to yield F-l; reacting F-l with a base to yield a compound of Formula 11, wherein Hal is halogen, n is 1, 2, 0r 3, each R3, Rb, R1, and R2 is, independently, (C1—C4)alkyl, (C2-C10)al'yl, or (C2— C10)aryl (C1—C4)alky1.
In some embodiments, Hal is halogen, which may be the same or different.
In some ments, each Ra, Rb, R1, and R2 is, independently, (C1- C4)alkyl, (C6—C1o)aryl, or (C6-C1o)a1'yl (C1-C4)alkyl.
Another embodiment provides a process to e a Compound of Formula (Ha|)n according to the following General Scheme VI 7_(Ha|)nOH 053i/\(>—(Hal)n RDNRbo B-1.J-1 LION/\Cj—(Hann \j: R10 0R1 RZOHOR2 0R1 T1:: Rio\EOR1 m.»a?gmy E-1 F—1 HO\[OH HOE Eli-:VN\\ —> RO2 KN/\©_(Hal)n Em/G((Habn nO \ \ N \ / —> O OH wherein the process comprises the following steps: reacting 1 under conditions suitable to yield C—l; ng C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K—l to yield E-l; reacting E-l with M—l in the presence of a base to yield F-l; reacting F-l with at least one acid to yield FF-l; reacting FF-l with N—l, or salts or co-crystals thereof, in the presence of an additive to yield G—l; reacting G-l under conditions suitable to yield a compound of Formula I; wherein Hal is halogen, which may be the same or different, n is 1, 2, or 3, L is —C(Rc)2-, -C(R°)2C(R°)2—, 2C(Rc)2C(R°)2-, or — C(Rc)2C(Rc)2C(Rc)2C(Rc)2—, each Rc is, independently, hydrogen, halo, hydroxyl or lkyl, each Rb is, independently C1-C4alkyl, each Ra, R1, and R2 is, independently, (C1-C4)alkyl, (C6—C10)aryl, or (C6-C10)aryl (C1-C4)alkyl.
Other embodiments and features will be set forth in the detailed description of the embodiments that follows, and in part will be apparent from the description, or may be learned by practice, of the claimed invention. The foregoing summary has been made with the tanding that it is to be considered as a brief and general synopsis of some of the embodiments disclosed , is provided solely for the bene?t and convenience of the reader, and is not intended to limit in any manner the scope, or range of equivalents, to which the appended claims are lawfully ed.
DETAILED DESCRIPTION In the following description, certain speci?c details are set forth in order to provide a thorough understanding of various embodiments. However, one skilled in the art will understand that the invention may be practiced without these details. The description below of several embodiments is made with the understanding that the present sure is to be considered as an exempli?cation of the claimed subject matter, and is not intended to limit the appended claims to the speci?c embodiments illustrated. The headings used throughout this disclosure are ed for ience only and are not to be construed to limit the claims in any way. Embodiments illustrated under any heading may be combined with embodiments illustrated under any other heading.
De?nitions Unless the context es otherwise, hout the present speci?cation and claims, the word "comprise" and variations thereof, such as, "comprises" and "comprising" are to be construed in an open, inclusive sense, that is as "including, but not limited to".
A pre?x such as "CH" or (Cu—CV) indicates that the following group has from u to V carbon atoms. For example, "(C1-C6)alkyl" indicates that the alkyl group has from 1 to 6 carbon atoms and 0)aryl(C1—C6)alkyl indicates that the aryl portion of the group has from 6 to 10 carbon atoms and the alkyl portion of the group has from one to six carbon atoms.
Reference throughout this speci?cation to "one ment" or "an ment" means that a particular feature, structure or characteristic bed in connection with the embodiment is included in at least one embodiment of the present invention. Thus, the appearances of the phrases "in one embodiment" or "in an embodiment" in various places throughout this speci?cation are not necessarily all referring to the same embodiment. Furthermore, the particular features, structures, or characteristics may be combined in any suitable manner in one or more embodiments.
"Amino" refers to the —NH2 l.
"Cyano" refers to the -CN l.
"Hydroxy" or "hydroxyl" refers to the —OH radical.
"Imino" refers to the =NH substituent.
"Nitro" refers to the -N02 radical.
"Oxo" refers to the =0 substituent.
"Thioxo" refers to the =S substituent.
"BZOH" refers to benzoic acid or dk . " refers to a straight or branched saturated hydrocarbon chain radical consisting solely of carbon and hydrogen atoms, having from one to twelve carbon atoms (Cl-Cu alkyl), or one to eight carbon atoms (C1-C8 alkyl), or one to six carbon atoms (C1-C6 alkyl), or one to 4 carbon atoms (C1-C4 alkyl)and which is attached to the rest of the molecule by a single bond, e.g., methyl, ethyl, n—propyl, 1-methylethyl (iSO—propyl), n-butyl, n-pentyl, methylethyl (t—butyl), 3-methylhexyl, 2-methylhexyl, ethenyl, prop-l-enyl, but-l-enyl, pent-l-enyl, penta-l,4-dienyl, ethynyl, propynyl, butynyl, pentynyl, hexynyl, and the like. Unless stated ise speci?cally in the speci?cation, an alkyl group may be optionally substituted.
In some embodiments, "Alkyl" refers to a straight or branched saturated hydrocarbon chain radical consisting solely of carbon and hydrogen atoms, having from one to twelve carbon atoms (Cl-Cu alkyl), or one to eight carbon atoms (C1-C8 alkyl), or one to six carbon atoms (C1-C6 alkyl), or one to 4 carbon atoms (C1—C4 alkyl) and which is ed to the rest of the molecule by a single bond, e.g., methyl, ethyl, n-propyl, l-methylethyl (iso-propyl), l, n-pentyl, 1,1-dimethylethyl (t—butyl), 3-methylhexyl, 2—methylhexyl, and the like. Unless stated otherwise speci?cally in the cation, an alkyl group may be optionally substituted.
"Alkenyl" refers to any group derived from a straight or branched hydrocarbon with at least one -carbon double bond. Alkenyl groups e, but are not d to, ethenyl (vinyl), yl (allyl), l-butenyl, 1,3-butadienyl, and the like. Unless otherwise speci?ed, an alkenyl group has from 2 to about 10 carbon atoms, for example from 2 to 10 carbon atoms, for example from 2 to 6 carbon atoms, for example from 2 to 4 carbon atoms.
"Alkynyl" refers to any group derived from a straight or branched hydrocarbon with at least one carbon—carbon triple bond and includes those groups having one triple bond and one double bond. Examples of alkynyl groups include, but are not limited to, ethynyl (-CECH), propargyl (-CHZCECH), (E)-pent-3 ynyl, and the like. Unless otherwise ed, an alkynyl group has from 2 to about 10 carbon atoms, for example from 2 to 10 carbon atoms, for example from 2 to 6 carbon atoms, for example from 2 to 4 carbon atoms.
"Alkoxy" refers to a radical of the formula —ORA where RA is an alkyl radical as de?ned above containing one to twelve carbon atoms, or one to eight carbon atoms, or one to six carbon atoms, or one to four carbon atoms. Unless stated otherwise speci?cally in the speci?cation, an alkoxy group may be optionally substituted. amino" refers to a radical of the formula —NHRA or —NRARA where each RA is, independently, an alkyl radical as de?ned above containing one to twelve carbon atoms, or one to eight carbon atoms, or one to six carbon atoms, or one to four carbon atoms. Unless stated otherwise speci?cally in the speci?cation, an alkylamino group may be optionally substituted.
"Thioalkyl" refers to a radical of the formula —SRA where RA is an alkyl radical as de?ned above containing one to twelve carbon atoms, or one to eight carbon atoms, or one to six carbon atoms, or one to four carbon atoms. Unless stated otherwise speci?cally in the speci?cation, a thioalkyl group may be optionally substituted.
"Aryl" refers to a clic hydrocarbon ring system radical sing hydrogen and 6 to 18 carbon atoms, or 6 to 10 carbon atoms or 6 to 8 carbon atoms.
Aryl radicals include, but are not limited to, aryl radicals derived from benzene. Unless stated otherwise speci?cally in the speci?cation, the term "aryl" or the pre?x "ar—" (such as in yl") is meant to include aryl radicals that are optionally substituted.
"Arylalkyl" (also "aralkyl") refers to a radical of the formula —RB—RC where RB is an alkyl group as de?ned above and RC is one or more aryl radicals as de?ned above, for example, benzyl. Arylalkyl groups include, but are not limited to, those groups derived from benzyl, tolyl, dimethylphenyl, 2-phenylethanyl, 2- naphthylmethyl, phenylmethylbenzyl, l,2,3,4-tetrahydronapthyl, and the like. An arylalkyl group comprises from 6 to about 30 carbon atoms, for example the alkyl group can comprise from 1 to about 10 carbon atoms and the aryl group can comprise from 5 to about 20 carbon atoms. Unless stated ise speci?cally in the speci?cation, an aralkyl group may be optionally substituted.
In some embodiments, "Arylalkyl" (also yl") refers to a radical of the formula —RB-RC where RB is an alkyl group as de?ned above and RC is one or more aryl radicals as de?ned above, for example, benzyl. Arylalkyl groups include, but are not limited to, those groups derived from benzyl, tolyl, dimethylphenyl, ylethan-l-yl, 2-naphthylmethyl, phenylmethylbenzyl, l,2,3,4-tetrahydronapthyl, and the like. An arylalkyl group comprises from 6 to about 30 carbon atoms, for e the alkyl group can comprise from 1 to about 10 carbon atoms and the aryl group can comprise from 6 to about 20 carbon atoms. Unless stated otherwise cally in the speci?cation, an aralkyl group may be optionally substituted.
"Cycloalkyl" refers to a cyclic alkyl group. A cycloalkyl group can have one or more cyclic rings and includes fused and bridged . Examples include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, adamantyl, and the like. Unless otherwise stated speci?cally in the speci?cation, a carbocyclic group may be optionally substituted.
"Carbocyclic ring" or "carbocycle" refers to a stable omatic monocyclic hydrocarbon radical consisting solely of carbon and hydrogen atoms, having from three to ?fteen carbon atoms, preferably having from three to ten carbon atoms, and which is saturated or unsaturated and attached to the rest of the molecule by a single bond. Monocyclic radicals include, for example, cyclopropyl, cyclobutyl, cyclopentyl, exyl, cycloheptyl, and cyclooctyl. Unless otherwise stated speci?cally in the speci?cation, a carbocyclic group may be optionally tuted.
"Cycloalkylalkyl" refers to a radical of the formula —RBRD where R3 is an alkyl group as de?ned above and RD is a carbocyclic radical as de?ned above. Unless stated otherwise speci?cally in the speci?cation, a cycloalkylalkyl group may be ally substituted.
In some embodiments, "Cycloalkylalkyl" refers to a radical of the formula — RBRD where R3 is an alkyl group as de?ned above and RD is a carbocyclic l as de?ned above. Unless stated otherwise speci?cally in the speci?cation, a lkylalkyl group may be optionally substituted.
"Halo" or "halogen" refers to bromo, chloro, ?uoro or iodo.
"Haloalkyl" refers to an alkyl radical, as de?ned above, that is substituted by one or more halo radicals, as de?ned above, e.g., tri?uoromethyl, di?uoromethyl, trichloromethyl, 2,2,2-tri?uoroethyl, 1,2—di?uoroethyl, 3—bromo?uoropropyl, 1,2-dibromoethyl, and the like. Unless stated otherwise speci?cally in the speci?cation, a haloalkyl group may be optionally substituted.
"Heterocyclyl" or "heterocyclic ring" refers to a stable 3— to 18-membered non—aromatic ring radical which consists of two to twelve carbon atoms and from one to six heteroatoms ed from the group consisting of nitrogen, oxygen and sulfur. In some embodiments, the heterocyclyl radical is a 3 to 12 membered non-aromatic ring, or a 3 to 8 membered non-aromatic ring, or a 3 to 6 membered non-aromatic ring. In some embodiments, the heterocyclyl radical ns one to four heteroatoms, or one to three heteroatoms, or one to two atoms, or one heteroatom. In the ments disclosed herein, the heterocyclyl radical is a monocyclic ring ; and the heterocyclyl radical may be partially or fully saturated. Examples of such heterocyclyl ls include, but are not limited to, dioxolanyl, thienyl, [l,3]dithianyl, imidazolinyl, imidazolidinyl, azolidinyl, isoxazolidinyl, morpholinyl, 2-oxopiperazinyl, 2-oxopiperidinyl, 2-oxopyrrolidinyl, oxazolidinyl, piperidinyl, piperazinyl, 4-piperidony1, pyrrolidinyl, pyrazolidinyl, thiazolidinyl, tetrahydrofuryl, trithianyl, tetrahydropyranyl, thiomorpholinyl, thiamorpholinyl, l-oxo-thiomorpholinyl, and l,l-dioxo-thiomorpholinyl. Unless stated otherwise speci?cally in the speci?cation, a cyclyl group may be optionally substituted.
In some embodiments, "Heterocyclyl" or "heterocyclic ring" refers to a stable 4— to 18-membered non-aromatic ring radical which consists of 3 to 17 carbon atoms and from one to six heteroatoms selected from the group consisting of nitrogen, oxygen and sulfur. In some embodiments, the heterocyclyl radical is a 4 to 12 ed non-aromatic ring, or a 4 to 8 ed omatic ring, or a 4 to 6 membered non-aromatic ring. In some ments, the heterocyclyl radical contains one to four heteroatoms, or one to three heteroatoms, or one to two heteroatoms, or one heteroatom. Unless stated otherwise speci?cally in the speci?cation, a heterocyclyl group may be ally substituted.
"N-heterocyclyl" refers to a heterocyclyl radical as de?ned above containing at least one nitrogen and where the point of attachment of the heterocyclyl radical to the rest of the molecule is through a nitrogen atom in the heterocyclyl l. Unless stated otherwise speci?cally in the speci?cation, an N—heterocyclyl group may be optionally substituted.
"Heterocyclylalkyl" refers to a radical of the formula —RBRE where R3 is an alkylgroup as de?ned above and RE is a heterocyclyl radical as de?ned above, and if the heterocyclyl is a nitrogen-containing heterocyclyl, the heterocyclyl may be attached to the alkyl radical at the nitrogen atom. Unless stated otherwise speci?cally in the cation, a heterocyclylalkyl group may be optionally substituted. oaryl" refers to an aryl group in which one or more of the carbon atoms (and any associated hydrogen atoms) are each independently replaced with the the same or different heteroatom selected from the group consisting of nitrogen, oxygen and sulfur. Unless ise ed, an heteroaryl group has from 5 to about 20 carbon atoms, for example from 5 to 18 carbon atoms, for example from 5 to 14 carbon atoms, for example from 5 to 10 carbon atoms. Heteroaryl groups have from one to six heteroatoms, from one to four heteroatoms, from one to three heteroatoms, from one to two heteroatoms or one heteroatom. Unless stated otherwise speci?cally in the cation, a heteroaryl group may be optionally substituted.
In some, embodiments, "Heteroaryl" refers to an aryl group in which one or more of the carbon atoms (and any associated hydrogen atoms) are each independently replaced with the the same or different heteroatom selected from the group consisting of nitrogen, oxygen and sulfur. Heteroaryl groups include, but are not limited to, groups derived from furan, imidazole, isothiazole, isoxazole, zole, e, pyrazine, pyrazole, pyridazine, ne, pyrimidine, pyrrole, tetrazole, thiadiazole, thiazole, thiophene, triazole, and the like. Unless otherwise speci?ed, an heteroaryl group has from 5 to about 20 carbon atoms, for example from 5 to 18 carbon atoms, for example from 5 to 14 carbon atoms, for example from 5 to 10 carbon atoms. Heteroaryl groups have from one to six heteroatoms, from one to four atoms, from one to three atoms, from one to two heteroatoms or one heteroatom. Unless stated otherwise speci?cally in the speci?cation, a heteroaryl group may be ally substituted.
"N—heteroaryl" refers to a aryl radical as de?ned above containing at least one nitrogen and where the point of attachment of the heteroaryl radical to the rest of the le is through a nitrogen atom in the heteroaryl radical. Unless stated otherwise speci?cally in the speci?cation, an N—heteroaryl group may be optionally substituted.
"Heteroarylalkyl" refers to a l of the formula —RBRF where R3 is an alkyl group as de?ned above and RF is a heteroaryl radical as de?ned above. Unless stated otherwise speci?cally in the speci?cation, a heteroarylalkyl group may be optionally substituted.
The term "substituted" used herein means any of the above groups (i.€., alkyl, alkylene, alkoxy, alkylamino, thioalkyl, aryl, aralkyl, carbocycle, cycloalkylalkyl, haloalkyl, heterocyclyl, N—heterocyclyl, heterocyclylalkyl, heteroaryl, N—heteroaryl and/or heteroarylalkyl) wherein at least one hydrogen atom is replaced by a bond to a drogen atoms such as, but not limited to: a halogen atom such as F, Cl, Br, and I; an oxygen atom in groups such as hydroxyl groups, alkoxy groups, and ester groups; a sulfur atom in groups such as thiol groups, thioalkyl groups, sulfone groups, sulfonyl groups, and sulfoxide groups; a nitrogen atom in groups such as amines, amides, alkylamines, dialkylamines, arylamines, alkylarylamines, diarylamines, N—oxides, imides, and es; a silicon atom in groups such as trialkylsilyl groups, dialkylarylsilyl groups, alkyldiarylsilyl groups, and triarylsilyl groups; and other heteroatoms in various other groups. "Substituted" also means any of the above groups in which one or more hydrogen atoms are replaced by a higher—order bond (e.g., a double— or triple—bond) to a heteroatom such as oxygen in oxo, carbonyl, carboxyl, and ester groups; and nitrogen in groups such as imines, oximes, hydrazones, and nitriles.
For example, "substituted" es any of the above groups in which one or more hydrogen atoms are ed with — NRgRH, -NR6C(=O)RH, —NRgC(=O)NRgRH, -NRgC(=O)ORH, —NRGC(=NRg)NRgRH, — NR6SOZRH, —OC(=O)NRc;RH, —ORg, —SR(;, -SOR(;, -SOzRG, G, —SOZOR(;, =NS02RG, and —SOzNRGRH. "Substituted also means any of the above groups in which one or more hydrogen atoms are replaced with —C(=O)Rg, —C(=O)ORG, -C(=O)NR(;RH, -CH2802RG, —CHZSOZNRGRH. In the foregoing, RG and RH are the same or ent and independently hydrogen, alkyl, , alkylamino, thioalkyl, aryl, aralkyl, carbocycle, cycloalkylalkyl, haloalkyl, heterocyclyl, N—heterocyclyl, heterocyclylalkyl, heteroaryl, roaryl and/or heteroarylalkyl. "Substituted" further means any of the above groups in which one or more hydrogen atoms are replaced by a bond to an amino, cyano, hydroxyl, imino, nitro, oxo, thioxo, halo, alkyl, alkoxy, alkylamino, thioalkyl, aryl, aralkyl, carbocycle, cycloalkylalkyl, haloalkyl, heterocyclyl, N—heterocyclyl, heterocyclylalkyl, heteroaryl, roaryl and/or heteroarylalkyl group. In addition, each of the foregoing substituents may also be optionally substituted with one or more of the above substituents.
The term " ted formamide acetal " as used herein, refers to a compound of Formula: wherein each Rb is ndently (C1-C4)alkyl, RVl and RVZ are independently (C1- C6)alky1 or RV1 and RV2 er with the atoms to which they are attached form a 5 to membered heterocyclyl.
"Alkylated formamide acetal" includes, but is not limited to N,N— dimethylformamide dimethyl acetal, ethylformamide diethyl acetal, N,N— dimethylformamide diisopropyl acetal, ethylformamide yl acetal, and N,N—diisopropylformamide yl acetal.
The term " acyl donor " as used herein, refers to a reactive compound which transfers a group —CO-Rx onto another molecule, wherein Rx is (C1-C6)alkyl—Ry and Ry is selected from the group consisting of H, CN, —NRZ1RZ2 — , C(O)RZI, C(O)ORZI, -C(O)NRZIRZZ, —OC(O)NRZIRZZ, —NRZIC(O)RZZ, —NRZIC(O)NRZZ, — NRZIC(O)ORZZ, -SR21, —S(O)1_2R", —S(O)2NRZIRZZ, (0)2RZ2 , NRZ‘S(O)2R22, and OR". RZl and R22 are independently selected from the group consisting of H, C1. 6a1kyl, C2_6alkenyl, C2_6alkynyl, C1_6heteroalkyl, C3.10cycloalkyl, 3 to 12 membered heterocyclyl, C6_10aryl and 5 to 10 membered heteroaryl. In certain embodiments, Ry is H. In certain embodiments, R21 and R22 are independently selected from the group consisting of H and C1_6alkyl. Acyl donors include but are not limited to anhydrides, esters and acid chlorides such as succinic anhydride, glutaric ide, acetic anhydride, Vinyl acetate, isopropenyl acetate, 4-chlorophenyl acetate, ethyl methoxy e, acetyl chloride and benzoyl chloride.
A person skilled in the art will understand that throughout this ation, and more speci?cally in Schemes I, II, III, V and VI, compound E-l may exist in an E or in a Z con?guration or as a mixture of an E and Z con?guration. Accordingly, in n embodiments, nd E-l is in an E or a Z con?guration, or a e thereof. In certain embodiments, compound E-l is in an E con?guration. In certain embodiments, nd E-l is in an Z con?guration. In certain embodiments, compound E-l is in a mixture of Z and E con?gurations.
R OTOR1 1 O R1O>/\NH O ? \ ?/Gmann\ NH/\£2—(Hal)n\ o o o 0‘ \Ra Ra (E-1) (E)-configuration (E-1) (Z)-configuration A person skilled in the art will understand that throughout this application, compound B-1.J-1 is a salt: | \ o o 0 HzN/\[>_(Hal)n/ O O B-1 0 J-1 The term "protecting group," as used herein, refers to a labile chemical moiety which is known in the art to protect reactive groups including without limitation, hydroxyl and amino groups, against undesired reactions during synthetic procedures. yl and amino groups protected with a ting group are referred to herein as "protected hydroxyl groups" and "protected amino groups", respectively. ting groups are typically used selectively and/or onally to protect sites during reactions at other reactive sites and can then be removed to leave the unprotected group as is or available for further reactions. Protecting groups as known in the art are described generally in Greene and Wuts, Protective Groups in Organic Synthesis, 3rd n, John Wiley & Sons, New York (1999). Generally, groups are protected or t as a precursor that will be inert to reactions that modify other areas of the parent molecule for conversion into their ?nal groups at an appropriate time. Further representative protecting or precursor groups are discussed in l, et al., Protocols for Oligonucleotide Conjugates, Eds, Humana Press; New Jersey, 1994; Vol. 26 pp. 1— 72. Examples of "hydroxyl protecting groups" include, but are not limited to, t—butyl, t— butoxymethyl, methoxymethyl, tetrahydropyranyl, l-ethoxyethyl, l-(2- chloroethoxy)ethyl, 2-trimethylsilylethyl, p-chlorophenyl, 2,4-dinitrophenyl, benzyl, 2,6-dichlorobenzyl, diphenylmethyl, p-nitrobenzyl, triphenylmethyl, trimethylsilyl, ylsilyl, ldimethylsilyl, t-butyldiphenylsilyl (TBDPS), triphenylsilyl, benzoylformate, acetate, chloroacetate, trichloroacetate, tri?uoroacetate, ate, benzoate, p—phenylbenzoate, enylmethyl carbonate, mesylate and tosylate. es of "amino protecting groups" include, but are not limited to, carbamate- protecting groups, such as 2-trimethylsilylethoxycarbonyl (Teoc), l-methyl-l-(4- biphenylyl)ethoxycarbonyl (Bpoc), t—butoxycarbonyl (BOC), allyloxycarbonyl (Alloc), 9-?uorenylmethyloxycarbonyl (Fmoc), and oxycarbonyl (Cbz); amide protecting groups, such as formyl, acetyl, trihaloacetyl, benzoyl, and nitrophenylacetyl; sulfonamide-protecting groups, such as 2-nitrobenzenesulfonyl; and imine and cyclic imide protecting groups, such as phthalimido and dithiasuccinoyl.
The invention disclosed herein is also meant to ass all pharmaceutically acceptable nds of Formula I and compounds of Formula 11 being isotopically-labeled by having one or more atoms replaced by an atom having a different atomic mass or mass number. Examples of isotopes that can be incorporated into the disclosed compounds include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, ?uorine, chlorine, and iodine, such as 2H, H, 11C, 13C, 14C, 13N, 15N, 15O, 17O, 18O, 31F, 32P, 358, 18F, 36Cl, 1231, and 1251, respectively. These radiolabeled compounds could be useful to help determine or measure the effectiveness of the compounds, by terizing, for example, the site or mode of action, or binding af?nity to pharmacologically important site of action. Certain isotopically—labeled compounds of Formula I and compounds of Formula II, for example, those orating a radioactive e, are useful in drug and/or substrate tissue distribution studies. The ctive isotopes tritium, 3 z'. e. H, and carbon-l4, z'.e. 14C, are particularly useful for this purpose in view of their ease of incorporation and ready means of detection.
Substitution with heavier isotopes such as deuterium, i.e. 2H, may afford certain therapeutic advantages resulting from greater metabolic stability. For example, in viva half—life may increase or dosage ements may be reduced. Thus, heavier isotopes may be preferred in some circumstances.
Substitution with positron emitting es, such as 11C, 18F, 15O and 13N, can be useful in on Emission Topography (PET) studies for examining substrate receptor occupancy. Isotopically—labeled compounds of Formula I and compounds of Formula II can generally be prepared by conventional techniques known to those skilled in the art or by ses analogous to those described in the Examples as set out below using an appropriate isotopically—labeled reagent in place of the non-labeled reagent previously employed.
The invention disclosed herein is also meant to encompass the in viva metabolic products of the disclosed compounds. Such products may result from, for e, the oxidation, reduction, hydrolysis, amidation, esteriflcation, and the like of the administered nd, ily due to enzymatic processes. Accordingly, the invention includes compounds produced by a process sing administering a compound of this invention to a mammal for a period of time sufficient to yield a metabolic product thereof. Such products are typically identi?ed by administering a radiolabeled compound described in the embodiments herein in a detectable dose to an animal, such as rat, mouse, guinea pig, , or to human, allowing suf?cient time for metabolism to occur, and isolating its conversion ts from the urine, blood or other biological samples.
"Stable compound" and e structure" are meant to indicate a compound that is suf?ciently robust to survive isolation to a useful degree of purity from a reaction mixture, and formulation into an efficacious therapeutic agent.
"Lewis acid" refers to a group that can accept a nonbonding pair of electrons, i.e., an electron-pair acceptor. Lewis acids are able to react with a Lewis base to form a Lewis adduct, by g the electron pair supplied by the Lewis base.
"Mammal" includes humans and both domestic animals such as laboratory animals and household pets (e.g., cats, dogs, swine, cattle, sheep, goats, horses, s), and non-domestic animals such as fe and the like.
"Optional" or "optionally" means that the subsequently described event of circumstances may or may not occur, and that the description includes instances where said event or circumstance occurs and instances in which it does not. For example, "optionally tuted aryl" means that the aryl radical may or may not be substituted and that the description includes both substituted aryl radicals and aryl radicals having no substitution.
"Pharmaceutically acceptable carrier, diluent or excipient" includes without limitation any adjuvant, carrier, excipient, t, ning agent, diluent, preservative, dye/colorant, ?avor enhancer, surfactant, wetting agent, dispersing agent, suspending agent, stabilizer, ic agent, solvent, or emulsifier which has been approved by the United States Food and Drug Administration as being acceptable for use in humans or domestic animals.
"Pharmaceutically acceptable salt" refers to a salt of a compound that is pharmaceutically acceptable and that possesses (or can be ted to a form that ses) the desired pharmacological activity of the parent compound. Examples of "pharmaceutically acceptable salts" of the compounds sed herein include salts derived from an appropriate base, such as an alkali metal (for example, sodium), an alkaline earth metal (for example, magnesium), ammonium and NX4+ (wherein X is C1—C4 alkyl). Pharmaceutically acceptable salts of a nitrogen atom or an amino group include for example salts of organic carboxylic acids such as acetic, benzoic, rsulfonic, citric, glucoheptonic, gluconic, lactic, c, tartaric, maleic, malonic, malic, mandelic, onic, lactobionic, succinic, 2-napththalenesulfonic, oleic, palmitic, propionic, stearic, and trimethylacetic acids; organic sulfonic acids, such as methanesulfonic, ethanesulfonic, benzenesulfonic and p—toluenesulfonic acids; and inorganic acids, such as hydrochloric, hydrobromic, sulfuric, nitric, phosphoric and sulfamic acids. Pharmaceutically acceptable salts of a compound of a hydroxy group include the anion of said compound in combination with a suitable cation such as Na+ and NX4+ (wherein X is independently selected from H or a C1—C4 alkyl group). ceutically acceptable salts also include salts formed when an acidic proton present in the parent compound is replaced by either a metal ion, e. g., an alkali metal ion, an alkaline earth ion, or an aluminum ion; or coordinates with an organic base such as diethanolamine, triethanolamine, N—methylglucamine and the like. Also included in this de?nition are ammonium and substituted or nized ammonium salts.
Representative non-limiting lists of pharmaceutically acceptable salts can be found in S.M. Berge et al., J. Pharma Sci, 66(1), 1-19 (1977), and Remington: The Science and Practice of Pharmacy, R. Hendrickson, ed., 21st edition, cott, Williams & Wilkins, Philadelphia, PA, (2005), at p. 732, Table 38-5, both of which are hereby incorporated by reference herein.
For therapeutic use, salts of active ingredients of the compounds sed herein will typically be pharmaceutically able, i.e. they will be salts derived from a physiologically acceptable acid or base. r, salts of acids or bases which are not pharmaceutically acceptable may also ?nd use, for example, in the preparation or cation of a compound of Formula I, a compound of Formula II or another compound described herein. All salts, whether or not derived from a physiologically acceptable acid or base, are within the scope of the t ion.
Metal salts refer to salts wherein the cation is a metal, such as those formed when an acidic proton present in a compound is replaced by either a metal ion, e.g., an alkali metal ion, an alkaline earth ion, or an aluminium ion; or a metal ion coordinates with an organic base such as diethanolamine, triethanolamine, N—methylglucamine and the like.
The metal can be an alkali metal, ne earth metal, transition metal, or main group metal. Non-limiting examples of suitable metals include lithium, sodium, ium, cesium, cerium, magnesium, manganese, iron, calcium, strontium, cobalt, titanium, aluminum, , cadmium, and zinc.
Non-limiting examples of suitable metal salts include a lithium salt, a sodium salt, a potassium salt, a cesium salt, a cerium salt, a magnesium salt, a manganese salt, an iron salt, a calcium salt, a strontium salt, a cobalt salt, a titanium salt, a aluminum salt, a copper salt, a cadmium salt, and a zinc salt.
In addition, salts may be formed from acid addition of certain organic and inorganic acids, e.g., HCl, HBr, H2SO4, H3PO4 or organic sulfonic acids, to basic centers, typically amines. y, it is to be understood that the compositions herein comprise compounds disclosed herein in their un—ionized, as well as zwitterionic form, and combinations with stoichiometric amounts of water as in hydrates.
Often crystallizations produce a solvate of the compound described in the embodiments disclosed herein. As used herein, the term te" refers to an aggregate that comprises one or more molecules of a nd described herein with one or more molecules of solvent. The solvent may be water, in which case the solvate may be a hydrate. Alternatively, the t may be an c solvent. Thus, the nds of the present invention may exist as a hydrate, including a monohydrate, dihydrate, hemihydrate, sesquihydrate, trihydrate, tetrahydrate and the like, as well as the corresponding solvated forms. The compounds bed herein may be true es, while in other cases, the compound described herein may merely retain adventitious water or be a mixture of water plus some adventitious solvent.
A "pharmaceutical composition" refers to a formulation of a compound described herein and a medium generally accepted in the art for the delivery of the biologically active compound to mammals, e.g., humans. Such a medium includes all pharmaceutically acceptable carriers, diluents or excipients therefor.
"Effective amount" or "therapeutically ive amount" refers to an amount of a compound according to the ion, which when administered to a patient in need thereof, is suf?cient to effect treatment for disease-states, conditions, or disorders for which the compounds have utility. Such an amount would be sufficient to elicit the biological or medical response of a tissue system, or patient that is sought by a researcher or clinician. The amount of a compound ing to the invention which tutes a therapeutically effective amount will vary depending on such factors as the nd and its biological activity, the composition used for administration, the time of administration, the route of administration, the rate of excretion of the nd, the duration of the treatment, the type of disease-state or disorder being treated and its severity, drugs used in combination with or coincidentally with the compounds described herein, and the age, body weight, general health, sex and diet of the patient.
Such a therapeutically ive amount can be ined routinely by one of ordinary skill in the art having regard to their own knowledge, the state of the art, and this disclosure.
The term "treatment" as used herein is intended to mean the administration of a compound or composition according to the present invention to alleviate or eliminate symptoms of HIV infection and/or to reduce viral load in a patient. The term "treatment" also encompasses the administration of a compound or composition according to the present invention post—exposure of the individual to the virus but before the appearance of symptoms of the disease, and/or prior to the detection of the virus in the blood, to prevent the appearance of symptoms of the e and/or to prevent the virus from reaching detectible levels in the blood, and the administration of a compound or composition according to the present invention to t tal transmission of HIV from mother to baby, by administration to the mother before giving birth and to the child within the ?rst days of life.
The term "antiviral agent" as used herein is intended to mean an agent (compound or ical) that is effective to inhibit the formation and/or replication of a virus in a human being, including but not limited to agents that interfere with either host or viral mechanisms necessary for the formation and/or replication of a virus in a human being.
The term "inhibitor of HIV replication" as used herein is intended to mean an agent e of reducing or eliminating the ability of HIV to replicate in a host cell, Whether in vitro, ex vivo or in viva.
The compounds described herein, or their pharmaceutically acceptable salts may n one or more asymmetric s and may thus give rise to enantiomers, diastereomers, and other stereoisomeric forms that may be de?ned, in terms of absolute stereochemistry, as (R)- or (S)— or, as (D)- or (L)- for amino acids. The present ion is meant to include all such possible isomers, as well as their racemic and optically pure forms. Optically active (+) and (—), (R)- and (S)-, or (D)— and (L)- isomers may be prepared using chiral synthons or chiral reagents, or ed using conventional techniques, for example, chromatography and fractional crystallization.
Conventional techniques for the preparation/isolation of individual enantiomers include chiral synthesis from a suitable optically pure precursor or resolution of the racemate (or the racemate of a salt or derivative) using, for example, chiral high re liquid chromatography (HPLC). When the compounds described herein contain ole?nic double bonds or other centers of geometric asymmetry, and unless speci?ed otherwise, it is ed that the compounds include both E and Z geometric isomers. Likewise, all tautomeric forms are also intended to be included.
A "stereoisomer" refers to a compound made up of the same atoms bonded by the same bonds but having different three-dimensional structures, which are not interchangeable. The present invention contemplates various stereoisomers and mixtures thereof and es iomers", which refers to two stereoisomers whose molecules are nonsuperimposeable mirror images of one another.
A "tautomer" refers to a proton shift from one atom of a molecule to another atom of the same molecule. The present invention includes tautomers of any said compounds.
An "enantioenriched" compound refers to a compound which ns more than 50% of one of a pair of enantiomers. An "enantioenriched" compound may have an enantiomeric excess (%ee) of over 5%, over 10%, over 20%, over 30%, over 40%, over 50%, over 60%, over 70%, over 80%, over 90%, over 95%, over 99%, or over 99.9%.
Reference to " a value or parameter herein includes (and describes) embodiments that are directed to that value or parameter per se. For example, description referring to "about X" includes description of "X". Also, the singular forms "a" and "the" include plural references unless the context clearly es otherwise.
Thus, e.g., reference to "the compound" includes a plurality of such compounds and reference to "the assay" includes reference to one or more assays and lents thereof known to those skilled in the art.
General Schemes Certain embodiments are directed to the multistep l synthetic methods described below, namely l Schemes I—VI. All substituent groups in the steps described below are as de?ned as follows: Hal is halogen, n is 1, 2, or 3, L is —C(RC)2-, -C(Rc)2C(R°)2—, —C(Rc)2C(RC)2C(RC)2-, or - C(RC)2C(RC)2C(RC)2C(RC)2-, each R0 is, independently, hydrogen, halo, hydroxyl or C1-C4a1kyl, each Ra, Rb, Rd, R1, and R2 is, independently, alkyl, aryl, or aralkyl.
In some embodiments, Hal is halogen, which may be the same or different.
In n embodiments, each Ra, Rb, Rd, R1, and R2 is, independently, (C1- C4)a1kyl, (CZ-Clo)aryl, or (C2-C10)aryl (C1-C4)alkyl.
In some embodiments, each Ra, Rb, R1, and R2 is, independently, (C1- C4)a1kyl, (C6—C1o)aryl, or (C6-C1o)a1'y1 (C1-C4)alkyl.
In certain embodiments, each Rb is, independently, (C1—C4)alkyl.
In certain ments, each RC is, ndently, hydrogen, -F, -C1, hydroxyl, or methyl. In certain embodiments, each R0 is, independently, hydrogen, -F, or -Cl. In n embodiments, each Rc is hydrogen.
In certain embodiments, each Ra, Rb, Rd, R1, and R2 is, independently, methyl, ethyl, phenyl, or benzyl. In certain embodiments, each Ra, Rb, R1, and R2 is methyl. In ular embodiments, Rd is ethyl.
In certain embodiments, each R1 is C1-C4alkyl and each R1, together along with the atoms to which they are bonded, forms a heterocycle. In certain embodiments, each R1 is methyl or ethyl, and each R1, together along with the atoms to which they are bonded, forms a cycle. In certain embodiments, each R1 is methyl, and each R1, together along with the atoms to which they are bonded, forms a heterocycle General Scheme 1: In certain ments, a process according to general scheme 1 is provided: 0 RE Rh H2N\/kOR1 N O (:LH/? K_ 1 N \— (Ha|)n rum\ \ (Ha|)n _, O / OxRa O‘Ra 0-1 D—1 ORa o O‘Ra O o Eli/(\N\\0 o O (Hal)n Emu/O—(Ham 0 OH General Scheme I wherein the process comprises the following steps: reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K-l to yield E-l; reacting E-l with M-l in the presence of a base to yield F—l; reacting F-l with at least one acid and N-l, or salts or co—crystals f, in the presence of a base to yield G-l; reacting G—l under conditions suitable to yield a compound of Formula I.
In some embodiments, N-l is in the form of a salt or a co-crystal.
General Scheme 11: In certain embodiments, a process according to general scheme 1 is provided: Ra‘o\)kOH 0 H N \ 2 | —(Ha|)n R\b ,Rb H N2 VKOR‘I N O (EkH/? K ’1 N \— Emma—'8')" —>_\ (H3011 —> \ O / O‘Ra O‘Ra 0-1 D-‘I R OTOR1 1 RZON R OTCR1 1 o 0 o L M4 N—1 N \ NH/\©—(Ha|)n —>\ N \ \ H R20 O O ?/G(Hal)n —> O‘Ra o O‘Ra oLY\N \ \ o H | |)n N N LYN \ H \ / | \_HI( a)n O —> N \ / 0 Q 0 OH General Scheme || wherein the process comprises the following steps: reacting A-l with H—l in the presence of a catalyst, a base, and an acylating t to yield B—l; reacting B—l with J—l in the ce of an acid to yield C—l; reacting C-l with an alkylated formamide acetal to yield D-l; reacting D-l with K-l to yield E-l; reacting E-l with M-l in the presence of a base to yield F—l; reacting F—l with at least one acid and N-l in the ce of a base to yield G— reacting G-l under conditions le yield a compound of Formula I.
In some embodiments, J-l is in the form of a salt or a co-crystal.
In some embodiments, N—l is in the form of a salt or a co-crystal.
General Scheme III: In certain embodiments, a process according to general scheme I is provided: HZN \ R‘Oa deRd AG— H(61)"| OH R>5d d Q4 M O O O O —> MO‘ —> O Rt: .Rb N o H2N\}\0R1 (?x/BN \— \ K-1 (Hahn —> rN/Gmann —>\ O / O‘Ra O‘Ra C-1 0-1 RZONOR2 R10 0R1 R1O\[OR1 o O \E o L M N-1 N \ N N \ N \ \— ocRa obRa E-1 F-1 wagfoLj?N \ NHAGWE‘I)"\ OLWAN \ N \ — H(a)nI / H | N \ / O O‘Ra 0 OH G-1 I General Scheme "I wherein the s comprises the following steps: reacting B-l with Q-lto yield BB-l reacting BB—l with J—l to yield C—l; reacting C-l with an alkylated fonnamide acetal to yield D—l; reacting D-l with K—l to yield E—l; reacting E—l with M-l in the presence of a base to yield F—l; reacting F—l with at least one acid and N-l, or salts or co-crystals thereof, in the ce of a base to yield G-l; reacting G-l under conditions suitable to yield a compound of Formula I.
In some embodiments, J-1 is in the form of a salt or a co—crystal.
General Scheme IV: In certain embodiments, a s according to general scheme 1 is provided: b b 0 O R\ ,R N o RZOJKn/ORZ N \_ \ H l (Hal)n H/\(>—(Hal)nN \ 0 / . o .
O‘Ra O‘Ra C-1 D-1 0 HzN OR 1 R10 0R1 I o NH; \ \ K-1 LN1 0 ‘ R20 m/\(>_(Hal)n N \ N \ \ / ’ O _. R20 H I —(Hal)n \ / o O‘Ra O o EpNj‘jgk:oLY\N \ NFIE—(Hahn\ OY\N \ N \ / LN \ OH I/ (Hal)n O O‘Ra 0 OH General Scheme IV wherein the process comprises the following steps: reacting C-l with an alkylated formamide acetal to yield D—l; reacting D-l with M-l to yield EE-l; reacting EE-l with K-l to yield F-l; ng F—l with at least one acid and N—l, in the presence of a base to yield G— reacting G-l under conditions le to yield a compound of Formula I.
In some embodiments, N—l is in the form of a salt or a co-crystal. l Scheme V In certain embodiments, a process according to general scheme 1 is provided: O x o N o H2N\}\OR1 rHAE;N \ \ _(Ha|)n —> NH/Umann —.\ K-1 ocRa 0~Ra C- 1 D-1 R1OTCR1 WON R10 0R1 o o \E o N \ N \ M-1 N \ N \ H H I /—(Hal)n R20 H I \ /—(Hal)n —’ O O II General Scheme V wherein the process comprises the following steps: ng C-l with an alkylated formamide acetal to yield D—l; reacting D-l with K—l to yield E-l; reacting E-l with M—l in the presence of a base to yield F-l; reacting F—l with a base to yield a compound of Formula II.
General Scheme VI In certain embodiments, a process according to general scheme 1 is provided: OH H2N | —(Hal)n O | / Rt; Rh 0 0 ° ij—(Haon\ N 0 OX0 —’ B—1.J—1 o‘ OR1 R10 0R1 RZOJHrOR 1 1 o RO OR H2N 0 \ \ M1 \E K1 H H | —(Hal)n N \ N \ / R20 H I (Ha|)n _. o \ / ‘Ra O O‘Ra E—1 F-1 O O‘Ra EL»OWAN \ N \ H | —(Hal)n N \ / —> O OH l scheme VI wherein the process comprises the following steps: reacting B-1.J-1 under conditions suitable to yield C—l; reacting C-l with an alkylated formamide acetal to yield D—l; reacting D-l with K—l to yield E-l; reacting E-l with M-l in the presence of a base to yield F-l; reacting F-l with at least one acid to yield FF-l; reacting FF-l with N—l, or salts or co-crystals f, in the presence of an additive to yield G-l; reacting G-l under conditions suitable to yield a compound of Formula I.
In some embodiments reacting F-l with at least one acid yields the ing aldehyde: N \ N \ R20 H | —(Hal)n \ / o ocRa which is hydrated to give FF—l.
General Scheme V11 n embodiments are directed to the multistep synthetic method described below, namely General Scheme VII: NHPG NHPG NH N»PG Ra-M o , _ _ . HO 3'1 0" (-)—Vince lactam b—1 General scheme VII n the process comprises the following steps: hydrogenating (—)—Vince lactam and protecting the reduced product to yield a—l; reacting a—l with R3-M to yield b-l; oxidizing b-l and yzing the product of the oxidation to yield 0—1.
In General Scheme VII: PG is a protecting group; and R3M is a n-alkyl Grignard reagent or an alkyl organolithium reagent.
In certain embodiments, the protecting group (PG) is selected from the group consisting of Boc, mide, benzyl, FMoc, acetyl, nylmethyl, tri?uoroacetyl, benzylidene, p-Toluenesulfonamide, p-Methoxybenzyl carbonyl, benzoyl, p-methoxybenzyl, carbamates, methoxybenzyl, p-methoxyphenyl, sulfonamides and carbobenzyloxy. In particular embodiments, the protecting group is In certain embodiments, R3M is an agnesium halide, an n- propylmagnesium halide, and n-butylmagnesium halide, methyl lithium, n-butyllithium, or n—hexyllithium. In particular embodiments, R3M is methyl magnesium bromide.
Scheme VIII Certain embodiments are directed to the multistep synthetic method bed below, namely Scheme VIII: HO HO HO UNBOCZ —’ UNBOCZ —’ UNHZ 9-1X N-1x Scheme VIII wherein the process comprises the following steps: reacting g-lx under conditions effective to yield h-1x; and reacting h-1x under conditions ive to yield N—lx.
In some embodiments, the process r comprises the following step: HO HO Dom: —’ UNBOCZ f-1X 9'1X reacting f—1x under conditions effective to yield g-lx.
In some embodiments, g-lx is hydrogenated in the presence of a catalyst and a source of hydrogen to yield h-1x.
In some embodiments, the st is selected form the group consisting of palladium (Pd) based catalysts, PtOz, Raney Nickel, RhCl(PPh3)3, Nyori’s catalyst, and Crabtree’s catalyst. Exemplary palladium catalyst include Pd/C. In some embodiments, the catalyst is selected form the group consisting of Pd/C, PtOz, Raney , RhCl(PPh3)3, Nyori’s catalyst, and Crabtree’s catalyst. In some embodiments, the catalyst is PtOz.
In certain embodiments, the source of hydrogen is formic acid, hydrazine, onapthalene, dihydroanthracene, H2 gas or Hantzch ester and isopropanol. In particular embodiments, the source of hydrogen is H2 gas. In particular embodiments, the source of hydrogen is H2 gas under an atmosphere of hydrogen.
In some embodiments, h-lx is reacted with an acid to yield N-lx. In some embodiments, the acid is a sulfonic acid, including but not limited to methanesulfonic acid, p-toluenesulfonic acid and rsulfonic acid; an inorganic acid, ing but not limited to phosphoric acid, hydrochloric acid and sulfuric acid; a carboxylic acid ing but not limited to tri?uoroacetic acid, oxalic acid and benzoic acid. In n embodiments, the acid is an inorganic acid. In particular embodiments, the acid is hydrochloric acid. In particular embodiments, the acid is anhydrous hydrochloric acid.
In some embodiments, g-lx is D‘NBoc2 and N—1x is In some embodlments, f—lx ls. . D‘OAC Certain embodiments are directed to the multistep synthetic method described below, namely General Scheme 1X: ~\NHBoc NHBoc NHBoc NHBoc ' HOD ’ HOWO ° ,6 + aHOWO + RXJLO cc-1b cc—1 a cc-1 b e-1 c—1a i NHBoc cc—1a Scheme 1X wherein the process comprises the following steps: reacting racemic c-la (which is a mixture of cc—lb and cc—la) with an acyl donor and an enzyme to yield cc—lb and e-l; ing e-l from cc-lb; and hydrolyzing e-1 to yield enantioenriched cc-1a.
In certain embodiments, Rx is )a1kyl-Ry and Ry is selected from the group consisting of H, CN, —NR21R22 — , C(O)RZI, —C(O)ORZI, —C(O)NRZIRZZ, OC(O)NRZIRZZ, —NR21C(O)R22, —NRZIC(O)NR22, —NRZ1C(O)ORZZ, —SRZI, —S(O)1_2RZI, —S(O)2NR21RZ2, —NRle(O)2RZZ and ORZl.
, NRZ18(O)2RZ2, In certain embodiments, R21 and R22 are ndently selected from the group ting of H, C1_6alkyl, C2_6alkenyl, C2_6alkynyl, teroalkyl, C3. locycloalkyl, 3 to 12 membered heterocyclyl, Calgary] and 5 to 10 membered aryl.
In n embodiments, Rx is (C1-C6)alkyl-Ry and Ry is selected from the group consisting of H, —C(O)ORZl and R21 is selected from the group consisting of H, C1_5alkyl, C3.1ocycloalkyl, and 3 to 12 membered heterocyclyl.
In certain embodiments, Rx is (C1—C6)alkyl-Ry and Ry is selected from the group consisting of H, —C(O)ORZ1 and R21 is selected from the group consisting of H and C1_6alkyl.
In certain embodiments, Rx is (C1—C4)alkyl-Ry and Ry is selected from the group consisting of H and COZH.
In certain embodiments, RX is methyl or (CH2)3—COZH. In certain embodiments, RX is (CH2)3—C02H.
In n embodiments, the acyl donor is an anhydride or an ester. In n embodiments, the anhydride includes but is not limited to glutaric anhydride and acetic anhydride. In certain embodiments, the ester includes but is not limited to Vinyl acetate, isopropenyl acetate, 4-chlorophenyl acetate and ethyl methoxy acetate. In particular embodiments, the acyl donor is glutaric anhydride.
In certain embodiments, the enzyme is a lipase. In certain embodiments, the lipase includes but is not limited to Novozyme 435, CAL—A, CAL—B, PPL, PSL-C, PSL, CRL and MML. In certain embodiments, the lipase includes but is not limited to CAL-A, CAL-B, PPL, PSL-C, PSL, CRL and MML. In n embodiments, the enzyme is CAL—B. In certain embodiments, the enzyme is Novozyme 435.
Novozyme 435 is a CAL—B lipase lized on an hydrophobic carrier (acrylin resin).
CAL-B is Candida antartica B lipase.
CAL-A is Candida antartica A lipase.
PPL is Porcine Pancreas Lipase.
PSL is Pseudomonas cepacia lipase.
PSL-C is an immobilized lipase from Pseudomonas cepacia.
CRL is Candida rugosa .
MML is Mucor miehei lipase.
Certain embodiments are directed to the multistep synthetic method described below, namely General Scheme X: NHBOC NHBoc .~ NHBoc NHBOC 0 ° J3 H0\"O —> + Ho RXJLyO + RXJLO co1b cc—1a 51 NHBoc NHBoc 910.0 . H03 cc—‘l a Scheme X wherein the s comprises the following steps: reacting racemic c-1a (which is a mixture of cc—1b and cc-la) with an acyl donor to yield racemic ee—l; reacting c ee-l (which is a mixture of e-l and e-2) with an enzyme to yield e—2 and cc-1a; and isolating enantioenriched cc- la.
In certain embodiments, RX is (C1-C6)alkyl-Ry and Ry is ed from the group consisting of H, CN, —NRZlRzz — , C(O)RZI, —C(O)ORZI, —C(O)NRZIR22, OC(O)NR21RZZ, —NRZIC(O)R22, —NR"C(0)NR22, —NRZIC(O)ORZZ, —SR21, —S(O)1.2Rzl, —S(O)2NR21RZ2, —NR"S(0)2RZ2 and OR".
, NRZ18(O)2RZZ, In certain ments, each R21 and R22 is independently selected from the group ting of H, C1_6alkyl, C2_6alkenyl, C2_6alkynyl, C1_6heteroalkyl, C3. locycloalkyl, 3 to 12 membered heterocyclyl, C6-10aryl and 5 to 10 membered heteroaryl.
In certain embodiments, Rx is (C1-C6)alkyl-Ry and Ry is selected from the group consisting of H, —C(O)ORZl and R21 is selected from the group consisting of H, kyl, C3,1ocycloalkyl, and 3 to 12 membered heterocyclyl.
In certain embodiments, Rx is (C1—C6)alkyl-Ry and Ry is selected from the group consisting of H, RZ1 and R21 is selected from the group consisting of H and C1_6alkyl.
In certain embodiments, Rx is (C1—C4)alkyl-Ry and Ry is selected from the group consisting of H and COZH.
In certain embodiments, RX is methyl or (CH2)3—COZH. In certain embodiments, RX is (CH2)3-C02H.
In certain embodiments, the acyl donor includes but is not limited to an anhydride or an acid chloride. In certain embodiments, the anhydride includes but is not d to ic anhydride and acetic anhydride. In n embodiments, the acid chloride include but is not limited to acetyl chloride and benzoyl chloride. In particular embodiments, the acyl donor is Glutaric anhydride.
In certain embodiments, the enzyme is a lipase such as but are not limited to CAL-A, CAL—B, PPL, PSL—C, PSL, CRL, and MML. In particular embodiments, the enzyme is CAL-B.
Scheme XI Certain embodiments are directed to the tep synthetic method described below, namely Scheme X1: 9NHBOC NHBoc + ‘ NHs j NHS acid HOWO + —> HO 'O + HOrd cc—‘lb 66-18 dd-2 dd,1 Scheme X1 wherein the process comprises the following steps: reacting racemic c-la (which is a mixture of cc-lb and cc-la) with a chiral acid to yield dd-l and dd-2; and isolating oenriched dd-l.
In certain embodiments, the chiral acid is selected from the group consisting e enantiomers of carboxylic acids including but not limited to: naproxen, phenyl succinic acid, malic acid, 2-pheny1propionic acid, alpha-methoxyphenyl acetic acid, tartranilic acid, 3—phenyllactic acid, a-hydroxyisovaleric acid, 2’—methoxy-tartranilic acid, (alpha—methylbenzyl)phtha1amic acid, 2’— chloro-tartranilic acid, pyroglutamic acid; e enantiomers of mandelic acid derivatives including but not limited to: mandelic acid, 2-chloromandelic acid, 4-bromo—mande1ic acid, O—acetyl mandelic acid, 4-methyl-mandelic acid; -single enantiomers of sulfonic acids including but not d to: camphor sulfonic acid; -single enantiomers of tartaric acid derivatives including but not limited to: ic acid, dibenzoyl tartaric acid hydrate, di-p—anisoyltartaric acid, di— toluyltartaric acid, dibenzoyl ic acid hydrate; -single enantiomers of phosphoric acid derivatives including but not d to: phencyphos hydrate, chlocyphos, hos, BINAP phosphate; and -single enantiomers of amino acids including but not limited tos: N—acetyl— phenylalanine, N-acetyl-leucine, N—acetyl-proline, boc-phenylalanine, and boc- homophenylalanine.
In certain ments, the chiral acid is a single enantiomers of a carboxylic acid.
In particular embodiments, the acid is (R)-Naproxen. In particular embodiments, the acid is R-(+)-mandelic acid.
In particular embodiments, the acid is (S)-Naproxen. In particular embodiments, the acid is S—(+)—mandelic acid.
In certain embodiments, the reaction with the chiral acid occurs in a solvent selected from the group consisting of water, acetonitrile, ethanol, isopropanol, methyl ethyl ketone, isopropyl acetate, dioxane, a mixture of water and a miscible organic solvents such as ethanol and isopropanol, an halogenated solvent such as dichloromethane and chloroform. In ular ments, the solvent is water or panol or a mixture thereof. In particular embodiments, the solvent is water. In particular embodiments, the solvent is isopropanol.
In certain embodiments, the reaction with the chiral acid is stirred at 0 to 120 °C, 20 to 120°C, 50 to 120 °C, 80 to 120 °C or about 100 °C. In certain embodiments, the on is d at about 20°C.
In certain embodiments, isolating dd-l comprises selectively recrystallizing dd—l. In certain embodiments, the recrystallization occurs in water, acetonitrile, ethanol, isopropanol, methyl ethyl ketone, isopropyl acetate, dioxane; a mixture of water and water-miscible organic ts such as ethanol and isopropanol, or a halogenated solvent such as dichloromethane or chloroform. In certain embodiments, the recrystallization occurs in a mixture of methyl ethyl ketone and water.
In certain embodiments, dd-l precipitates out of solution and is ?ltered.
Schemes VII —XI se steps and intermediates which are useful for the the preparation of N—l and/or a compound of Formula I.
General s — individual steps Additional embodiments are directed to the individual steps of the multistep general synthetic methods described above, namely General Schemes I-V and VI to XI.
These individual steps and intermediates of the present invention are described in detail below. All substituent groups in the steps described below are as de?ned in the multi— step method above.
A. Acylation and amidation ofMeldrum ’s acid to e C-I: R \ o H N2 «(j—(Ham OH / N \ O | J-1 + O O 0x0 M6 —~ / 0 H/\(>—(Hal)n o o 7< 0‘" H-1 c-1 1. Conversion ofA-I to 3-1 In particular embodiments, one equivalent of Meldrum’s acid (A-1) and a suitable catalyst are suspended in a suitable solvent, and the resulting solution is treated with about 1.2 equivalents of H-l. About 2 equivalents of a suitable base are slowly added to the resulting solution, ed by the addition of about 1.1 equivalents of a suitable ing reagent. The reaction occurs at about 20 to 80 °C and is d to ue until consumption of Meldrum’s acid is complete, as monitored by any suitable method known in the art.
In certain embodiments, the catalyst is a nucleophilic amine-containing compound, such as, but is not limited to, 4—dimethylaminopyridine, imidazole, 1,4- diazabicyclo[2.2.2]octane, l,8-diazabicyclo[5.4.0]undecene, or pyridine. In further embodiments, the catalyst is a nucleophilic ine containing compound, such as, but not d to, triphenylphosphine. In a particular embodiment, the catalyst is 4— dimethylaminopyridine.
In certain embodiments, the solvent for the above reaction is a polar non- protic solvent or an aromatic solvent. In certain embodiments, the solvent for the above reaction is a polar otic solvent. In certain embodiments, the solvent for the above reaction is an aromatic solvent. Exemplary polar non-protic solvents include, but are not limited to, acetonitrile, N,N—dimethylformamide, N,N-dimethylacetamide, 1,4-dioxane, or N—methylpyrrolidinone. Exemplary aromatic solvents for the above reaction include, but not limited to, pyridine, toluene, xylene, benzene, or benzene. In still further ments, the solvent is a mixture comprising at least one of the forgoing solvents. For example, in certain embodiments, the solvent is a mixture of up to three, or up to two, polar non—protic solvents selected from the group ting of acetonitrile, N,N-dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, and N- methyl—2—pyrrolidinone. In other embodiments, the solvent is a mixture of up to three, or up to two, aromatic solvents selected from the group consisting of pyridine, toluene, , benzene, and chlorobenzene. In one embodiment the solvent is a mixture of up to three, or up to two, ts selected from the group consisting of acetonitrile, N,N- ylformamide, N,N—dimethylacetamide, 1,4—dioxane, N—methyl—2—pyrrolidinone, pyridine, e, xylene, benzene, and chlorobenzene. In a further embodiment, the solvent is acetonitrile.
In certain embodiments, R21 is (C1—C4)alkyl, (C2-C10)al’yl, or (C2—C10)aryl (C1- C4)a1kyl. In certain embodiments, R8 is (C1-C4)alkyl, (C6—C10)'clryl, or 0)aryl (C1— C4)alkyl. In certain embodiments, Ra is (C1-C4)alkyl. In certain embodiments Rais — CH3,that is H—l is methoxyacetic acid.
In certain embodiments, the base is an amine base, an aromatic base, nic carbonate, a metal hydride, an alkoxide, or mixtures thereof. In certain embodiments, the base is an amine base. In certain ments, the base is an ic base. In certain embodiments, the base is an inorganic carbonate. In certain embodiments, the base is a metal hydride. In certain embodiments, the base is an alkoxide. ary amine bases include, but are not limited to, triethylamine, N,N— ropylethylamine, quinuclidine, l,4-diazabicyclo[2.2.2]octane, 1,8- diazabicyclo[5.4.0]undecene, pylamine, and tributylamine. Exemplary aromatic amine bases include, but are not limited to, pyridine. Exemplary inorganic carbonates e, but are not limited to, lithium carbonate, sodium carbonate, potassium carbonate, or cesium carbonate. Exemplary metal hydrides, include, but are not limited to, sodium hydride or potassium hydride. Exemplary alkoxides include, but are not limited to, sodium methoxide, sodium tert—butoxide or lithium tert—butoxide. In still further embodiments, the base is a mixture comprising at least one of the preceding bases. For example, in certain embodiments, the base is a mixture of up to three, or up to two, amine bases. In certain embodiments, the base is a mixture of up to three, or up to two, aromatic bases. In certain embodiments, the base is a mixture of up to three, or up to two, inorganic carbonates. In certain embodiments, the base is a mixture of up to three, or up to two, metal hydrides. In certain embodiments, the base is a mixture of up to three, or up to two, alkoxides. In certain embodiments, the base is a mixture of up to three, or up to two, bases from the group consisting of triethylamine, N,N— diisopropylethylamine, quinuclidine, l,4-diazabicyclo[2.2.2]octane, 1,8— diazabicyclo[5.4.0]undec—7—ene, tripropylamine, tributylamine, pyridine, lithium ate, sodium carbonate, potassium carbonate, cesium carbonate, sodium hydride, potassium hydride, sodium methoxide, sodium tert—butoxide and lithium tert-butoxide.
In a ular embodiment, the base is triethylamine.
In certain embodiments, the acylating reagent is a ylic acid activating reagent, a carbodiimide derivative, or a mixture thereof. In certain embodiments, the acylating reagent is a carboxylic acid activating reagent. In certain ments, the acylating reagent is a carbodiimide derivative. In certain embodiments, the acylating reagent is a mixture of a ylic acid activating reagent and a carbodiimide derivative. Exemplary carboxylic acid activating reagents include, without limitation, pivaloyl chloride, carbonyldiimidazole, l chloride, and oxalyl chloride.
Exemplary carbodiimide tives e, without limitation, carbonyldiimidazole and MN’—dicyclohexylcarbodiimide. In certain embodiments, the acylating reagent is yl chloride, carbonyldiimidazole, thionyl chloride, oxalyl de, or N,N’— dicyclohexylcarbodiimide. In certain embodiments, the acylating t is a e of up to three, or up to two, reagents from the groups consisting of pivaloyl chloride, carbonyldiimidazole, thionyl chloride, oxalyl chloride, or N,N’- dicyclohexylcarbodiimide. In certain embodiments, the acylating reagent is pivaloyl de. In certain embodiments, the reaction occurs at about 20 to 70 °C, about 20 to 60 °C, about 20 to 50 °C, about 20 to 40 oC, about 20 to 30 °C, about 30 to 80 °C, about to 70 °C, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 oC, about 40 to 80 °C, about 40 to 70 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 OC, about 70 to 80 °C, or any subrange therebetween. In particular embodiments, the reaction occurs at about 35 to 40 °C, about 40 to 45 °C, about 45 to 50 0C, or any subrange therebetween.
In particular embodiments, the catalyst is 4-dimethylaminopyridine, the t is acetonitrile, R3 is —CH3, the base is triethylamine, the acylating t is yl chloride and the reaction occurs at about 45 to 50 oC. 2. Conversion ofB-I to C-1 In a separate vessel, about 1.2 equivalents of J-l is suspended in a suitable solvent. The resulting solution is treated with about 1.5 equivalents of a le acid, and then this acidic solution is added to the above acylation reaction in progress. The reaction is allowed to continue for about 12 to about 24 hours at about 20 to 80 °C, after which time the t is removed and C-1 is recovered and puri?ed from the residue using any suitable technique known in the art, such as, but not limited to solvent extraction, silica gel chromatography and crystallization.
In certain embodiments, J-l is suspended in a polar non-protic solvent or an aromatic t. In certain embodiments, J-l is suspended in a polar non—protic solvent. In certain embodiments, J-1 is suspended in an aromatic solvent. Exemplary polar non-protic solvent include, but are not limited to, acetonitrile, N,N- dimethylformamide, methylacetamide, oxane, and N—methyl pyrrolidinone. Exemplary aromatic solvents include, but are not limited to, pyridine, toluene, xylene, benzene, and chlorobenzene. In still further embodiments, J-l is suspended in a solvent e comprising one or more polar non-protic solvents and/or one or more aromatic solvents. In certain embodiments, J-l is suspended in a solvent mixture comprising up to three, or up to two, polar non-protic solvents. In certain embodiments, J-1 is suspended in a t mixture comprising up to three, or up to two, aromatic ts. In certain embodiments, J-l is ded in a solvent mixture comprising up to three, or up to two, solvents from the group consisting of acetonitrile, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, N—methyl pyrrolidinone, pyridine, toluene, xylene, benzene, and chlorobenzene. In a further embodiment, J-l is suspended in acetonitrile.
In particular embodiments, the acid is an inorganic acid, an organic acid, or a halogenated organic acid. In certain embodiments, the acid is an inorganic acid. In certain embodiments, the acid is an organic acid. Exemplary inorganic acids, include, but are not limited to hloric acid, hydrobromic acid, and hydroiodic acid.
Exemplary organic acids, include, but are not limited to, formic acid and acetic acid. In yet other embodiments the organic acid is a halogenated organic acid. ary halogenated organic acids include, but are not limited to, trifluoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and ropropionic acid. In still further embodiments, the acid is a mixture comprising one or more organic acids and one or more inorganic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, organic acids. In n embodiments, the acid is a mixture sing up to three, or up to two, halogenated organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, nic acids. In a certain embodiment, the acid is a mixture of up to three, or up to two, acids selected from the group ting of hydrochloric acid, hydrobromic acid, hydroiodic acid, formic acid, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and per?uoropropionic acid. In a particular embodiment, the acid is tri?uoroacetic acid.
In particular embodiments, each Hal is independently —F or -Cl. In a particular embodiment, Hal is -F In certain embodiments, n = 1-3. In certain embodiments, n = 2. In certain embodiments, n = 3. In further embodiments, J-l is HZN? H2N F F or F . In certain embodiments, J-l is H2N H2N F F. In further embodiments, J-l is F.
In still r embodiments, J-l is in the form of a salt or co-crystal, such as, but not d to a salt or co-crystal of hydrochloric acid or tri?uoroacetic acid. In certain embodiments, J-l is a salt or stal of methane sulfonic acid.
For example, in certain ments, J—l is: F F H2N o HCI H2N o A F3C OH F F F or F H2N o HCI In a particular embodiment, J-1 is F F H2N?, WA.
In a particular embodiment, J-1 is F For example, in certain embodiments, I-l is: F F or F F.
CI F F F In a particular embodiment, J-1 is .
F30 o In a particular embodiment, J—l is F In certain embodiments, the reaction occurs at about 20 to 70 °C, about 20 to 60 °C, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 OC, about 30 to 80 °C, about to 70 °C, about 30 to 60 OC, about 30 to 50 °C, about 30 to 40 °C, about 40 to 80 °C, about 40 to 70 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 oC, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 OC, about 70 to 80 °C, or any subrange etween. In ular embodiments, the reaction occurs at about 35 to 40 °C, about 40 to 45 °C, about 45 to 50 0C, or any subrange therebetween.
In certain embodiments, the solvent is removed under reduced pressure. In particular embodiments, C-l is extracted from the crude residue by solvent extraction.
In a particular embodiment, the crude residue is dissolved in an organic solvent, such as ethyl acetate, and the organic layer is washed with water. The ed s layers are extracted with an organic solvent, such as ethyl acetate. The combined organic layers are washed with saturated sodium bicarbonate solution, and the combined bicarbonate washes are back extracted with an organic solvent such as ethyl acetate.
Total combined organic layers are dried over a drying agent, such as magnesium sulfate, ?ltered, and concentrated under reduced pressure. The resulting crude material is puri?ed using any suitable que, such as silica gel chromatography to yield C-l.
In particular ments, J-l is suspended in acetonitrile, the acid is tri?uoroacetic acid, J-l is F F and the reaction occurs at about 45 to 50 3. Formation ofC-1 through B—IOJ-I salt Alternatively, in certain embodiments, C-l is formed via formation of a B- 1-J-1 salt following the procedure below. 3. Formation of3-1 °J-1 salt by addition ofJ-I to B—I Rio H N \ Re 2 al)n ‘0 o o J.1 | o H N \ O O 2 I O O I /—(Hal)n X O O B 1 B-1 0 J-1 The free acid of B-l (about 1 equivalent) is dissolved in a solvent, followed by addition of J-l (about 1 to about 5 equivalents). In certain embodiments, the salt is aged for up to 12 hours, up to 10 hours, up to 8 hours, up to 6 hours, up to 4 hours, or up to 3 hours. The salt is obtained by any suitable methods known in the art, including but not limited to solvent ?ltration, extraction, crystallization, and silica gel chromatography.
In certain embodiments, the solvent for the above reaction is a polar non- protic solvent or an aromatic solvent. In certain embodiments, the solvent for the above reaction is a polar non-protic solvent. In certain embodiments, the solvent for the above on is an aromatic solvent. Exemplary polar non-protic solvents include, but are not limited to, acetonitrile, N,N—dimethylformamide, methylacetamide, oxane, or N—methylpyrrolidinone. ary aromatic solvents for the above reaction include, but not limited to, pyridine, e, xylene, benzene, or benzene. In still further embodiments, the solvent is a mixture comprising at least one of the forgoing solvents. For example, in certain embodiments, the solvent is a mixture of up to three, or up to two, polar non-protic solvents selected from the group consisting of acetonitrile, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4—dioxane, and N- methyl-2—pyrrolidinone. In other embodiments, the solvent is a mixture of up to three, or up to two, aromatic solvents selected from the group ting of pyridine, toluene, xylene, benzene, and chlorobenzene. In one embodiment the solvent is a mixture of up to three, or up to two, solvents selected from the group consisting of acetonitrile, N,N- dimethylformamide, N,N-dimethylacetamide, 1,4-dioxane, N—methylpyrrolidinone, pyridine, toluene, xylene, e, and chlorobenzene. In a further embodiment, the solvent is itrile.
In some embodiments, B-1.J-l is : 0:1?0_O + H N \ 3 /\© r1 O O In certain embodiments, the on is stirred to about 15 to 30 °C, about 20 to 70 OC, about 20 to 60 oC, about 20 to 50 oC, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 °C, about 30 to 70 OC, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 OC, about 40 to 80 °C, about 40 to 70 °C, about 40 to 60 °C, about 40 to 50 OC, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 °C, about 70 to 80 °C, or any subrange therebetween. In further embodiments, the on proceeds at about 15 to about 25 °C.
In n embodiments, the solvent is acetonitrile and the reaction proceeds at about 18 to about 25 °C. b. Formation ofC-1from salt 3-] oJ-I R1 0 N \ | \ —> (?at/Oman,o o o ' H2N/\©—(Hal)n/ o o o X C-1 B-1 0 J-1 The salt B-l-J-l (about 1 equivalent) is suspended in a suitable solvent. The resulting solution is treated with about 0.1 to l equivalents of a suitable acid. The reaction is d to continue for about 12 to about 24 hours at about 20 to 80 0C, after which time the solvent is d and C-1 is recovered and puri?ed from the residue using any suitable technique known in the art, such as, but not limited to solvent extraction, silica gel chromatography, crystallization, and ?ltration.
In certain ments, the solvent for the above reaction is a polar non- protic solvent or an aromatic solvent. In certain embodiments, the solvent for the above reaction is a polar non-protic solvent. In n embodiments, the solvent for the above reaction is an aromatic t. Exemplary polar non-protic solvents include, but are not limited to, acetonitrile, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, or N—methylpyrrolidinone. Exemplary aromatic solvents for the above reaction include, but not limited to, pyridine, toluene, xylene, benzene, or chlorobenzene. In still further embodiments, the solvent is a mixture comprising at least one of the forgoing solvents. For example, in certain ments, the solvent is a e of up to three, or up to two, polar non-protic solvents selected from the group ting of acetonitrile, N,N-dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, and N- -2—pyrrolidinone. In other embodiments, the solvent is a mixture of up to three, or up to two, aromatic solvents selected from the group consisting of pyridine, toluene, , benzene, and chlorobenzene. In one embodiment the solvent is a mixture of up to three, or up to two, solvents selected from the group consisting of acetonitrile, N,N— dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, N—methylpyrrolidinone, pyridine, toluene, xylene, benzene, and chlorobenzene. In a further embodiment, the t is acetonitrile.
In particular embodiments, the acid is an inorganic acid, an organic acid, or a halogenated organic acid. In n embodiments, the acid is an inorganic acid. In certain embodiments, the acid is an organic acid. Exemplary inorganic acids, e, but are not limited to hydrochloric acid, romic acid, hydroiodic acid. Exemplary organic acids, include, but are not d to, formic acid and acetic acid. In yet other embodiments the organic acid is a halogenated organic acid. ary nated organic acids include, but are not limited to, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and per?uoropropionic acid. In certain embodiments, the acid is tri?uoroacetic acid. In still r embodiments, the acid is a mixture comprising one or more organic acids and one or more inorganic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, halogenated organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, inorganic acids. In a certain embodiment, the acid is a mixture of up to three, or up to two, acids selected from the group consisting of hydrochloric acid, romic acid, odic acid, formic acid, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and per?uoropropionic acid. In a particular embodiment, the acid is tri?uoroacetic acid.
In certain embodiments, after the addition is complete the reaction is heated to about 20 to 70 °C, about 20 to 60 °C, about 20 to 50 oC, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 °C, about 30 to 70 °C, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 °C, about 40 to 80 °C, about 40 to 70 oC, about 40 to 60 oC, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 °C, about 70 to 80 °C, or any subrange therebetween. In further embodiments, the reaction proceeds at about 60 °C.
In ular embodiments, the solvent is acetonitrile, the acid is tri?uoroacetic acid and the reaction proceeds at about 60 °C.
B. Alkylation of C-1 toform E-I: O Rt: Rb OR1 N o K-1 NH/\©—(Hal)n\ N \ —> O _, H l /—(Hal)n ‘RE11 or c-1 D-1 R10 OR1 N \ NH/\E;_(Hal)n\ A solution of about one equivalent of C-1 in a suitable solvent is treated with about one to one and a half equivalents of an alkylated formamide acetal and is stirred at about 0 to 60 °C for about 10 hours to about 18 hours. The reaction is treated with about one equivalent of K-l, and is allowed to continue for about one to about four hours, and is then quenched via the addition of an acid. E-l is then extracted and puri?ed by any suitable methods known in the art, including but not limited to solvent extraction, crystallization, and silica gel tography.
In a particular embodiment, the solvent is a non-protic polar organic solvent such as, but not limited to, 2—methyl ydrofuran, tetrahydrofuran, acetonitrile, diisopropyl ether, methyl tert—butyl ether, N,N—dimethylformamide, N,N- dimethylacetamide, 1,4-dioxane, N—methylpyrrolidinone, or mixtures thereof. In a further embodiment, the solvent is 2-methyl tetrahydrofuran.
In certain embodiments, the alkylated formamide acetal is selected from the group consisting of N,N—dimethylformamide dimethyl acetal, N,N—dimethylformamide diethyl acetal, N,N—dimethylformamide ropyl acetal, N,N—diethylformamide dimethyl acetal, and N,N—diisopropylformamide dimethyl . In a particular embodiment, the alkylated formamide acetal is N,N—dimethylformamide yl acetal.
In particular embodiments, one equivalent of C-1 is treated with about 1.1 equivalents of the alkylated formamide acetal.
In certain embodiments, R1 is (C1-C4)alkyl, 0)aryl, or (C2—C10)aryl (C1-C4)alkyl. In n embodiments, R1 is (C1-C4)alkyl, (C5—C10)aryl, or o)aryl (C1-C4)alkyl. In certain embodiments, R1 is C1-C4alkyl. In further embodiments R1 is — CH3, that is, K-l is aminoacetaldehyde dimethyl acetal.
In certain embodiments, the reaction is quenched with an nic acid, an organic acid, or a halogenated organic acid. In certain embodiments, the acid is an inorganic acid. In certain embodiments, the acid is an c acid. In certain embodiments, the acid is a nated c acid. Exemplary inorganic acids, include, but are not limited to hydrochloric acid, hydrobromic acid, hydroiodic acid.
Exemplary organic acids, include, but are not limited to, formic acid and acetic acid.
Exemplary halogenated organic acids include, but are not limited to, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and per?uoropropionic acid. In still further embodiments, the acid is a mixture comprising one or more organic acids, one or more inorganic acids, and/or one or more halogenated organic acids. In n embodiments, the acid is a mixture sing up to three, or up to two, organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, halogenated organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, inorganic acids. In a certain embodiment, the acid is a mixture of up to three, or up to two, acids selected from the group ting of hydrochloric acid, hydrobromic acid, hydroiodic acid, formic acid, trifluoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and ropropionic acid. In a particular embodiment, the acid is tri?uoroacetic acid. In particular embodiments, the reaction is quenched with hydrochloric acid. In particular embodiments, the reaction is quenched with 2 N HCl. In certain embodiments, the reaction is not quenched.
In certain embodiments, the reaction proceeds at about 10 to 60 °C, about 10 to 50 °C, about 10 to 40 °C, about 10 to 30 OC, about 10 to 20 °C, 20 to 60 OC, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 oC, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 60 °C, or any subrange therebetween. In particular embodiments, the reaction proceeds at room ature. In further embodiments, the reaction proceeds at about 15 to about 25 °C.
In particular embodiments, the solvent is 2-methyl tetrahydrofuran, the ted formamide acetal is MN—dimethylformamide dimethyl acetal, R1 is —CH3, and the reaction proceeds at about 18 to about 23 °C.
C. Cyclization ofE-I toform F-I: R10 0R1 R205;OR R10 OR1 \E O I 0 M \ "Emmi,\ \ / N\ "/0043"\ o o 0~Ra o o In particular embodiments, a solution of about one equivalent of E-l and about one to ?ve equivalents of M-l in a ?rst suitable solvent is combined and cooled to about 0 to 5 °C. In certain embodiments, the base is slowly introduced to the reaction mixture while the internal temperature of the reaction is kept cool throughout the addition (e.g., below room temperature, or below about 25 °C, or below about 20 °C, or below about 15 °C). After the addition is complete the reaction is heated to about 20 to 80 °C for at least about 14 hours.
After this time has elapsed, the reaction may be diluted with an aqueous acidic on and a further suitable c solvent and the product extracted and puri?ed by any suitable methods known in the art, including but not d to solvent extraction, llization, and silica gel chromatography. In certain embodiments, the aqueous acidic solution is hydrochloric acid and acetic acid. For e, in certain embodiments, the aqueous acidic solution is glacial acetic acid.
In particular embodiments, the ?rst solvent is one or more alcohols, one or more polar organic ts, or a mixture of or more alcohols and one or more polar organic solvents. In certain ments, the ?rst solvent is up to three alcohols, up to three polar organic solvents, or a mixture thereof (i.e., a mixture of up to three, or up to two, alcohols and up to three, or up to two, polar c solvents). In n embodiments, the ?rst solvent is one or two alcohols, one or two polar organic solvents, or a mixture thereof (i.e., a mixture of one or two alcohols and one or two polar organic solvents). In certain ments, the ?rst solvent is an alcohol. In certain embodiments, the ?rst solvent is a polar organic solvent. Exemplary alcohols include, but are not limited to, methanol, ethanol, n-propanol, 2-propanol, butanol, and tert— butanol. Exemplary polar organic solvents include, but are not limited to, acetone, acetonitrile, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, and N- methyl—Z—pyrrolidinone. In certain embodiments, the ?rst t is methanol, l, anol, 2-propanol, butanol, tert-butanol acetone, acetonitrile, N,N- dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, or N—methyl—Z— pyrrolidinone. In a certain embodiment, the ?rst t is methanol.
In particular embodiments, the base is a metal hydride, an alkoxide, or a bis(trialkylsilyl) amide. In certain embodiments, the base is a metal hydride. In certain embodiments, the base is an alkoxide. In n embodiments, the base is a bis(trialkylsilyl) amide. Exemplary metal hydrides include, but are not limited to lithium e, sodium hydride, and potassium hydride. Exemplary alkoxides include, but are not limited to, sodium methoxide, sodium tert—butoxide, sodium ethoxide, ium tert—butoxide, potassium ethoxide, sodium tert—pentoxide, and lithium tert- butoxide. Exemplary bis(trialkylsilyl) amide bases include, but are not d to lithium imethylsilyl)amide, sodium bis(trimethylsilyl)amide, and potassium bis(trimethylsilyl)amide. In still further embodiments, the base is a mixture of at least one of the foregoing bases. In certain embodiments, the base is a mixture of up to three, or up to two, metal hydrides. In certain embodiments, the base is a mixture of up to three, or up to two, alkoxides. In certain embodiments, the base is a mixture of up to three, or up to two, metal bis(trialkylsilyl) amides. In certain embodiments, the base is a mixture of up to three, or up to two, of the following bases: lithium hydride, sodium hydride, potassium hydride, sodium ide, sodium utoxide, sodium ethoxide, potassium utoxide, ium ethoxide, sodium tert—pentoxide, lithium tert— butoxide, lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, or potassium bis(trimethylsilyl)amide. In particular embodiments, the base is sodium methoxide.
In certain embodiments, R2 is (C1—C4)alkyl, (C2—C10)aryl, or (C2—C10)aryl )alkyl. In certain embodiments, R2 is (C1-C4)alkyl, (C6—C10)3ryl, or 0)aryl (C1-C4)alkyl. In certain embodiments, R2 is C1-C4alkyl. In certain embodiments, R2 is — In certain embodiments, after the addition is complete the reaction is heated to about 20 to 70 oC, about 20 to 60 °C, about 20 to 50 OC, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 °C, about 30 to 70 °C, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 °C, about 40 to 80 °C, about 40 to 70 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 oC, about 70 to 80 °C, or any subrange therebetween.
In particular embodiments, the ?rst solvent is an alcohol, the base is an alkoxide, after the on is complete the on is heated to about 40 to about 50 oC and R2 is (C1-C4)alkyl In particular embodiments, the ?rst solvent is methanol, the base is sodium methoxide, after the addition is complete the reaction is heated to about 40 to about 50 °C and R2 is —CH3_ D. Alkylation and Cyclization 0fC-I toform F-I: 1. alkylated formamide acetal 2 H2N\i R10 0R1 . 0R1 \E 0 H | \—(Hal)n K-1 / N \ N \ 0 R20 H I n \ / O O ‘Ra 3- O RZOJKn’OR2 o o C-1 m4 F-1 In certain embodiments, about one equivalent of C-1 and about 1 to about 5 equivalents of an alkylated formamide acetal are combined in a reaction vessel, and reaction mixture is agitated for approximately 30 minutes. In n embodiments, about one lent of C-1 and about 1 to about 3 equivalents of an ted formamide acetal are combined in a reaction vessel. A ?rst suitable solvent and about one equivalent of K—l are added to the mixture, and the reaction is allowed to proceed for several hours, after which the ?rst solvent is removed by any suitable means known in the art.
The resulting material is dissolved in a second suitable solvent and about 1 to about 5 equivalents of M-l is added. The reaction mixture is cooled to about 0 °C to about 5 °C, and then about one and a half to two equivalents of a base is slowly added to the reaction mixture. The internal temperature of the reaction is kept cool throughout the addition (e. g., below room ature, or below about 25 °C, or below about °C, or below about 15 °C). After the addition is complete the reaction is heated to about 20 to 80 °C for about 8 to about 16 hours.
After this time has elapsed, the on is cooled to room ature, quenched via the on of an acid and d with the addition of an organic solvent.
The product, F-1, may then be extracted and puri?ed by any suitable methods known in the art, including but not limited to solvent extraction, crystallization and silica gel chromatography.
In certain embodiments, R3 is (C1—C4)alkyl, (C2-C10)aryl, or 0)aryl (C1- C4)alkyl. In certain embodiments, R8 is (C1-C4)alkyl, (C6—C10)aryl, or (C6—C10)aryl (C1— C4)alkyl. In certain embodiments, Ra is lkyl. In certain embodiments, Ra is —CH3.
In a particular embodiment, the ?rst solvent is a non-protic polar organic solvent such as, but not limited to, yl tetrahydrofuran, tetrahydrofuran, acetonitrile, diisopropyl ether, methyl tert—butyl ether, N,N—dimethylformamide, N,N— dimethylacetamide, 1,4—dioxane, N—methyl—2—pyrrolidinone, or mixtures thereof. In a further embodiment, the ?rst solvent is 2-methyl tetrahydrofuran.
In certain embodiments, the alkylated forrnamide acetal is selected from the group ting of N,N-dimethylformamide dimethyl acetal, methylformamide diethyl acetal, N,N—dimethylformamide diisopropyl acetal, N,N—diethylformamide dimethyl acetal, and N,N—diisopropylformamide dimethyl acetal. In a particular ment, the alkylated formamide acetal is N,N—dimethylformamide yl acetal.
In certain embodiments, R1 is (C1—C4)alkyl, (C2-C10)aryl, or (CZ—Clo)aryl (C1-C4)alkyl. In certain embodiments, R1 is (C1-C4)alkyl, (C6-C10)aryl, or (C6—C10)aryl (C1-C4)alkyl. In certain embodiments, R1 is C1-C4alkyl. In further embodiments R1 is — CH3, that is K-l is aminoacetaldehyde dimethyl acetal.
In particular embodiments, the base is a metal hydride, a ialkylsilyl) amide base, or an de. In certain embodiments, the base is a metal e. In particular embodiments, the base is a bis(trialkylsilyl) amide base. In particular embodiments, the base is an alkoxide. Exemplary metal hydrides include, but are not limited to lithium hydride, sodium hydride, and potassium hydride. Exemplary bis(trialkylsilyl) amide bases include, but are not limited to lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, and potassium bis(trimethylsilyl)amide. ary alkoxides include, but are not limited to, sodium methoxide, sodium tert—butoxide, sodium ethoxide, potassium utoxide, potassium ethoxide, sodium tert—pentoxide, and lithium tert—butoxide. In still further ments, the base is a mixture of at least one of the foregoing bases. In n embodiments, the base is a mixture of up to three, or up to two, metal es. In certain embodiments, the base is a mixture of up to three, or up to two, bis(trialkylsilyl) amide base. In certain embodiments, the base is a mixture ofup to three, or up to two, alkoxides. In n embodiments, the base is a mixture of up to three, or up to two, bases selected from the group consisting of lithium hydride, sodium hydride, potassium hydride, lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, ium bis(trimethylsilyl)amide, sodium ide, sodium tert—butoxide, sodium ethoxide, potassium tert-butoxide, potassium ethoxide, sodium tert—pentoxide, and lithium tert— butoxide. In particular embodiments, the base is sodium methoxide. In particular embodiments, a solution of base in alcohol is added to the reaction. A suitable alcohol includes but is not limited to, methanol, ethanol, n—propanol, 2-propanol, butanol, or tert—butanol. In a certain embodiment, the base is sodium ide. In a certain embodiment, the base is added as 30% solution of sodium methoxide in methanol.
In particular embodiments, the second solvent is an alcohol or a polar t. In certain ments, the second solvent is an alcohol. In certain embodiments, the second solvent is a polar solvent. Exemplary alcohols include, but are not limited to, ol, ethanol, n-propanol, 2-propanol, butanol, and tert-butanol. ary polar organic solvents include, but are not limited to, acetone, acetonitrile, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, or N—methyl pyrrolidinone. In a certain embodiment, the second solvent is methanol.
In certain embodiments, R2 is (C1-C4)alkyl, (C2—C10)aryl, 0r (C2-C10)aryl (C1—C4)alkyl. In certain embodiments, R2 is (C1-C4)alky1, (C6—C10)aryl, or (C6—C10)ary1 (C1-C4)alkyl. In certain embodiments, R2 is C1-C4alkyl. In certain embodiments, R2 is — In certain embodiments, after the addition is complete the reaction is heated to about 20 to 70 °C, about 20 to 60 °C, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 °C, about 30 to 70 °C, about 30 to 60 OC, about 30 to 50 °C, about 30 to 40 °C, about 40 to 80 °C, about 40 to 70 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 OC, about 60 to 80 °C, about 60 to 70 °C, about 70 to 80 °C, or any subrange therebetween.
In particular embodiments, R8 is )alky1,, the ?rst solvent is 2-methyl tetrahydro?Jran, the ted formamide acetal is methylformamide dimethyl acetal, R1 is (C1-C4)alkyl, the base is an alkoxide, the second solvent is an alcohol, after the addition is complete the reaction is heated to about 40 to about 50 °C, and R2 is (C1— C4)alkyl..
In particular embodiments, R3 is —CH3, the ?rst solvent is 2-methyl tetrahydrofuran, the alkylated formamide acetal is N,N—dimethylformamide dimethyl acetal, R1 is —CH3, the base is sodium ide, the second solvent is methanol, after the on is complete the reaction is heated to about 40 to about 50 °C, and R2 is -CH3_ E. Preparation ofEE-Ifrom D-I RE Rh 2 N’ o Rzo??roR o NH/\©\ \ _(Hal)n M_1 o \ N o —> \ H/\©—(Hal)n/ o O‘Ra 0 D4 OR, D—l is reacted with M—l to yield EE-l. For example. D-l is dissolved in a suitable solvent and about 1 to about 5 equivalents of M-l is added. The reaction mixture is cooled to about 0 °C to about 5 °C, and then about one and a half to two equivalents of a base is slowly added to the reaction mixture. The internal temperature of the reaction is kept cool throughout the addition (e. g., below room temperature, or below about 25 °C, or below about 20 °C, or below about 15 0C). After the addition is complete the reaction is heated to about 20 to 80 °C for about 8 to about 16 hours.
After this time has d, the reaction is cooled to room temperature, quenched via the addition of an acid and diluted with the addition of an organic solvent.
The product, EE-l, may then be extracted and d by any suitable methods known in the art, including but not limited to solvent extraction, crystallization and silica gel chromatography.
In certain embodiments, R3 is (C1-C4)alkyl, (C2—C10)aryl, or (C2-C10)aryl (C1- C4)a1kyl. In certain embodiments, R8 is (C1-C4)alkyl, (C6—C10)aryl, or (C6—C10)aryl (C1— C4)a1kyl. In certain embodiments, R3 is C1-C4alky1. In particular embodiments, Rais — In certain embodiments, Rb is (C1—C4)alkyl, 0)aryl, or (C2-C10)3,I'yl (C1-C4)alkyl. In certain embodiments, In certain ments, each Rb is, independently )alkyl, (C6—C10)aryl, or (C6-C10)aryl )alkyl. In certain embodiments, Rb is C1-C4alkyl. In further embodiments R'3 is —CH3. In certain embodiments, In certain embodiments, each Rb is —CH;.
In particular embodiments, the base is an inorganic carbonate, a metal hydride, or an alkoxide, or a mixture f. In ular embodiments, the base is an inorganic carbonate. In particular embodiments, the base is a metal hydride. In particular embodiments, the base is an alkoxide. Exemplary inorganic carbonates include, without limitation, lithium carbonate, sodium carbonate, potassium carbonate and cesium carbonate. Exemplary metal hydrides include, without limitation, sodium hydride and potassium hydride. Exemplary alkoxides include, without limitation, sodium methoxide, sodium tert—butoxide, sodium ethoxide, potassium tert—butoxide, potassium ethoxide, sodium tert—pentoxide, and lithium tert—butoxide. In certain embodiments, the base is a e of up to three, or in other embodiments, up to two, inorganic carbonates. In certain embodiments, the base is a mixture of up to three, or in other ments, up to two, metal hydrides. In n ments, the base is a e of up to three, or in other ments, up to two, alkoxides. In certain ments, the base is a mixture of up to three, or in other embodiments, up to two, bases selected from the group consisting of lithium carbonate, sodium ate, potassium carbonate, cesium carbonate, sodium hydride, potassium hydride, sodium tert—butoxide, sodium ethoxide, potassium tert—butoxide, potassium ethoxide, sodium tert—pentoxide, and lithium tert-butoxide. In particular embodiments, the base is sodium methoxide.
In particular embodiments, the t is an alcohol or a polar solvent. In certain embodiments, the solvent is an alcohol. In certain embodiments, the solvent is a polar solvent. Exemplary alcohols e, but are not limited to, methanol, ethanol, n— propanol, 2-propanol, butanol, and tert—butanol. Exemplary polar organic solvents include, but are not limited to, acetone, itrile, N,N—dimethylformamide, N,N— dimethylacetamide, l,4-dioxane, or yl-2—pyrrolidinone. In a certain embodiment, the solvent is yl—2—pyrrolidinone.
In certain embodiments, the on is quenched with an inorganic acid, an organic acid, or a halogenated organic acid. In certain embodiments, the acid is an inorganic acid. In certain embodiments, the acid is an organic acid. In certain embodiments, the acid is a halogenated c acid. Exemplary inorganic acids, include, but are not limited to hydrochloric acid, hydrobromic acid, hydroiodic acid.
Exemplary organic acids, include, but are not limited to, formic acid and acetic acid.
Exemplary halogenated organic acids e, but are not limited to, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and perfluoropropionic acid. In still further embodiments, the acid is a mixture comprising one or more organic acids, one or more inorganic acids, and/or one or more halogenated organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, nated organic acids. In certain embodiments, the acid is a mixture comprising up to three, or up to two, inorganic acids. In a certain embodiment, the acid is a mixture of up to three, or up to two, acids selected from the group consisting of hydrochloric acid, hydrobromic acid, hydroiodic acid, formic acid, tri?uoromethanesulfonic acid, tri?uoroacetic acid, trichloroacetic acid, and ropropionic acid. In a ular ment, the acid is tri?uoroacetic acid. In particular ments, the reaction is quenched with hydrochloric acid. In particular embodiments, the reaction is quenched with 2 N HCl. In certain embodiments, the reaction is not quenched.
In certain embodiments, R2 is (C1—C4)alkyl, (C2-C1o)ary1, or (CZ—Cio)aryl (C1—C4)a1kyl. In certain embodiments, R2 is (C1-C4)alkyl, 0)aryl, or (C6—C10)aryl (C1-C4)alkyl. In certain embodiments, R2 is C1-C4alkyl. In certain embodiments, R2 is — In certain embodiments, after the addition is te the reaction is heated to about 20 to 80 OC, about 20 to 80 °C, about 20 to 60 °C, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 °C, about 30 to 70 °C, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 OC, about 40 to 80 oC, about 40 to 70 oC, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 °C, about 70 to 80 °C, or any subrange therebetween.
In particular embodiments, R2 is (C1-C4)alkyl, each Rb is (C1-C4)alky1 which are the same or different, R3 is (C1-C4)alkyl, the base is an alkoxide, and the solvent is an organic solvent.
In ular embodiments, R2 is —CH3, each Rb is —CH3, RE1 is —CH3, the base is sodium methoxide, and the solvent is N—methylpyrrolidinone.
F. Condensation ofF-I with N-I toform G-I: Z:aOH/\©—(Haln HONHDZ N1 /\©’Hal)" One equivalent of F-l and a suitable solvent are combined in a reaction vessel, about 5 to 8 equivalents of a ?rst acid and about 0.2 to about 0.5 equivalent of a second acid are added. The reaction may take place between about 20 to about 100 °C.
The reaction is d to ue for about 2 to about 5 hours, after which about 1.5 equivalents of N-l and about 2 to about 3 equivalents of a base are slowly introduced to the reaction vessel. After the addition is completed, the reaction is allowed to progress for at least about 1 hour.
Water and onal solvent are added to the reaction vessel and G—l is extracted and purified by any suitable method known in the art, including but not d to solvent extraction, silica gel chromatography and crystallization.
In particular embodiments, the solvent is a non-protic polar organic solvent, such as, but not limited to, ydrofuran, acetonitrile, diisopropyl ether, methyl tert- butyl ether, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4-dioxane, or N- methylpyrrolidinone, or mixtures thereof. In certain embodiments, the solvent is a mixture of one, two or three, or in certain embodiments, a mixture of one or two of the following solvents: tetrahydrofuran, acetonitrile, diisopropyl ether, methyl tert—butyl ether, MN—dimethylformamide, MN—dimethylacetamide, 1,4-dioxane, or N—methyl pyrrolidinone. In further embodiments, the solvent is acetonitrile.
In certain embodiments, the ?rst acid is an organic acid, an organic carboxylic acid, or an inorganic acid. In certain embodiments, the first acid is an organic acid. In certain ments, the ?rst acid is an organic carboxylic acid. In certain embodiments, the first acid is an inorganic acid. Exemplary organic acids include, but are not limited to methane ic acid, tri?uoromethanesulfonic acid and tri?uoroacetic acid. Exemplary organic carboxylic acids include, but are not limited to acetic acid, formic acid, butyric acid, propionic acid, and c acid. ary inorganic acids include, but are not limited to, hydrochloric acid, hydrobromic acid, nitric acid, phosphoric acid, or sulfuric acid. In yet further embodiments, the ?rst acid is acetic acid.
In certain embodiments, the second acid is an organic acid, an organic carboxylic acid, or an inorganic acid. In certain embodiments, the second acid is an organic acid. In n embodiments, the second acid is an organic carboxylic acid. In n embodiments, the ?rst acid is an inorganic acid. Exemplary organic acids include, but are not limited to methanesulfonic acid, trifluoromethanesulfonic acid and roacetic acid. Exemplary inorganic acids include, but are not limited to, hydrochloric acid, hydrobromic acid, and sulfuric acid. Exemplary organic carboxylic acids include, but are not limited to acetic acid, formic acid, butyric acid, propionic acid, or benzoic acid. In particular embodiments, the second acid is methanesulfonic acid or formic acid.
In certain embodiments, the ?rst acid is acetic acid and the second acid is methanesulfonic acid.
In certain embodiments, the first acid and the second acid are the same acid.
In yet other embodiments, the first acid and the second acid are formic acid or acetic acid.
In certain embodiments, N-l is in solution when added to the reaction mixture.
In further embodiments, L is —CH2-CH2—, that is, N-1 is (1R,3 S)—3— yclopentan—l—ol: \O‘NHZ . In some embodiments, N-l is (3 -aminocyclopentanol).
In particular ments, N-1 is a salt or co—crystal. Suitable salts or co— crystals of N-1 include, but are not limited to, oxalic acid, hydrochloric acid, mandelic acid, R—mandelic acid, and S—mandelic acid. Suitable salts or c0—crystals 0f N-l include, but are not limited to, c acid, naproxen, S—naproxen and R-naproxen.
H0 o UNHZ 0 H0HO" In still further embodiments, N-l is O ; HO\E>‘NH O 2 HOWOH HO HC| . UNI—I2 O HC|. \O‘NHZ O 7 7 o 0 HO HO OH OH HO HO 0 0 HO, HO,’ OH OH HO HO \O—NHz ' \O‘NHz .
HO 0 OH HO HO UNHZ o UNHZ o HO mOH OH mg. 00 HO O UNH2 - I or .
HO?NH2 o O HOHOH In still further embodiments N-l1s; O ; \O‘NHZHO° HCIOD‘NHZH In certain embodiments, after the addition of the acid(s) the on is kept at about 20 to about 90 °C, about 20 to about 80 °C, about 20 to about 70 °C, about 20 to about 60 °C, about 20 to about 50 °C, about 20 to about 40 °C, about 20 to about 30 °C, about 30 to about 100 °C, about 30 to about 90 °C, about 30 to about 80 °C, about to about 70 °C, about 30 to about 60 °C, about 30 to about 50 °C, about 30 to about 40 °C, about 40 to about 100 °C, about 40 to about 90 OC, about 40 to about 80 °C, about 40 to about 70 °C, about 40 to about 60 °C, about 40 to about 50 °C, about 50 to about 100 °C, about 50 to about 90 °C, about 50 to about 80 °C, about 50 to about 70 °C, about 50 to about 60 oC, about 60 to about 100 °C, about 60 to about 90 oC, about 60 to about 80 °C, about 60 to about 70 °C, about 70 to about 80 °C, or any subrange therebetween. In still further embodiments, after the addition of the acid(s) the reaction is kept at about 65 to about 70 oC, about 70 to about 75 °C, about 75 to about 80 °C, or any subrange therebetween.
In particular embodiments, the solvent is acetonitrile, the ?rst acid is an c ylic acid, the second acid is an organic carboxylic acid, and after the addition of the acids the reaction is kept at about 70 to about 75 °C.
In particular embodiments, the solvent is acetonitrile, the ?rst acid is acetic acid, the second acid is methanesulfonic acid, after the addition of the acids the reaction \O‘NHZ o 0 H0HOH is kept at about 70 to about 75 °C, and N-l is O G. Deprotection 0f G-I toform a compound ofFormula I: O O O O N \ N \ \ \ \ / —> N \ / O O O 0‘ O OH G-1 | A reaction vessel is charged with approximately one lent of G-1 and a suitable solvent. About two to three equivalents of a metal salt, a Lewis acid, or other reagent is added to the solution. The resulting suspension is stirred at about 40 to about 100 °C for about ten minutes to about three hours. The reaction is quenched by the addition of an acid and a nd of Formula I is then extracted and puri?ed by any suitable technique known in the art, such as, but not limited to, solvent extraction, preparative HPLC and crystallization.
In a particular embodiment, the solvent is a non-protic polar organic solvent such as, but not limited to, 2—methy1tetrahydrofuran, tetrahydrofuran, acetonitrile, diisopropyl ether, methyl tert-butyl ether, N,N—dimethylformamide, N,N— dimethylacetamide, 1,4-dioxane, N—methylpyrrolidinone, or mixtures thereof. In a further embodiment, the t is acetonitrile.
In certain embodiments, G—l is reacted with at least one reagent ed from the group consisting of metal salts, Lewis acids, sodium ethanethiolate, sodium hexamethyldisiloxane, tri?uoroacetic acid, and combinations thereof.
In further embodiments, the metal salt is selected from the group consisting of magnesium bromide, lithium chloride, lithium bromide, and lithium iodide. In still further embodiments, the metal salt is m chloride.
In particular embodiments, the Lewis acid is ed from the group consisting of boron tri?uoride methyl te, boron tri?uoride l etherate, boron tri?uoride dibutyl etherate, aluminium chloride, aluminum bromide, boron trichloride, boron mide, chlorotrimethylsilane, iodotrimethylsilane, palladium, and boron tri?uoride diethyl te. In certain embodiments, the Lewis acid is selected from the group consisting of chlorotrimethylsilane, iodotrimethylsilane, sodium ethanethiolate, sodium hexamethyldisiloxane, palladium, boron tri?uoride l etherate, and tri?uoroacetic acid.
In particular embodiments, other reagents suitable to facilitate the conversion are sodium ethanethiolate, sodium hexamethyldisiloxane, and tri?uoroacetic In particular embodiments, the deprotection of G-l to form a compound of Formula I takes place in the presence of about two to about three equivalents of a reagent selected from the group consisting of: magnesium bromide, lithium chloride, lithium bromide, lithium iodide, boron tri?uoride methyl etherate, boron tri?uoride diethyl etherate, boron tri?uoride dibutyl etherate, aluminium chloride, aluminum bromide, boron trichloride, boron mide, chlorotrimethylsilane, iodotrimethylsilane, ium, boron ride diethyl etherate, chlorotrimethylsilane, iodotrimethylsilane, sodium ethanethiolate, sodium hexamethyldisiloxane, palladium, boron tri?uoride diethyl etherate, and tri?uoroacetic acid.
In certain ments, the on proceeds at about 40 to about 50 °C, about 40 to about 60 °C, about 40 to about 70 °C, about 50 to about 60 °C, about 50 to about 70 °C, about 50 to about 80 °C, about 60 to about 70 °C, about 60 to about 80 °C, or any subrange therebetween. In particular embodiments, the reaction proceeds at about 50 °C.
In particular ments, the solvent is acetonitrile, the metal salt is magnesium bromide, and the reaction proceeds at about 50 °C.
H. ysis ofF-I to yield a compound ofForm ula 11: R10 0R1 R10 0R1 T\°\ To F-1 " A reaction vessel is charged with approximately one lent of F-l and a solution of about ten to ?fteen parts of a ?rst organic solvent and about 3 to 8 parts water is prepared. About two equivalents of a base are added to the solution. The resulting suspension is stirred at about 0 to about 50 °C for about 14 to about 17 hours.
Conversion may be monitored by any suitable method known in the art, such as, but not limited to HPLC.
Water and a second organic solvent are added to the suspension and the pH adjusted to about pH 3 by the dropwise addition of a suitable acid. The product, a nd of a II, can then be extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to, solvent tion, silica gel chromatography and crystallization.
In certain embodiments, the ?rst organic solvent is an alcoholic solvent or a polar organic solvent. In certain embodiments, the ?rst organic solvent is an alcoholic solvent. In certain embodiments, the ?rst organic solvent is a polar organic solvent.
Exemplary alcoholic solvents include, without limitation, methanol, ethanol, n- ol, 2-propanol, butanol, and tert—butanol. Exemplary polar organic solvents include, but are not limited to, N,N—dimethylformamide, N,N—dimethylacetamide, 1,4— dioxane, and N—methylpyrrolidinone. In particular embodiments, the ?rst organic solvent is methanol.
In further ments, the base is ed from the group consisting of m hydroxide, sodium hydroxide, potassium hydroxide, lithium carbonate, sodium carbonate and potassium ate. In still further embodiments, the base is lithium hydroxide monohydrate.
In certain embodiments, the reaction proceeds at about 10 to about 50 °C, about 10 to about 40 °C, about 10 to about 30 oC, about 10 to about 20 oC, about 20 to about 50 °C, about 20 to about 40 °C, about 20 to about 30 °C, about 30 to about 50 °C, about 30 to about 40 °C, about 40 to about 50 °C, or any ge therebetween. In particular embodiments, the reaction proceeds at room temperature. In further embodiments, the reaction proceeds at about 18 to about 23 °C.
In particular embodiments, the base is lithium hydroxide monohydrate, the on ds at about 10 to about 50 °C and the ?rst organic solvent is methanol.
In particular embodiments, the base is lithium hydroxide monohydrate, the reaction proceeds at about 18 to about 23 °C and the ?rst organic solvent is methanol.
I. ation ofBB-Ifrom 3-1 and Q-I: Rio RdJLRd I R350] 0 o o o —> OMQRQ About one equivalent of B-1 and eight to twelve equivalents of Q-l are added to a reaction vessel and ved in a suitable organic solvent. The solution is then heated to about 85 to about 115 oC and allowed to proceed for about two to six hours, after which time the reaction is cooled to room temperature. BB-l is then puri?ed using techniques known in the art, such as, but not limited to silica gel chromatography.
In certain embodiments, the solvent is a non-polar aromatic solvent or a polar aprotic solvent. In certain embodiments, the t is a non-polar aromatic solvent. In certain embodiments, the solvent is a polar aprotic solvent. Exemplary non— polar aromatic include, but are not limited to, toluene, xylene, chlorobenzene, and dichlorobenzene. Exemplary polar c solvents include, but are not limited to, N,N— dimethylformamide, MN—dimethylacetamide, 1,4—dioxane, and ylpyrrolidinone.
In still further ments, the reaction can occur without additional solvent. In particular embodiments, the solvent is toluene.
In certain ments, the reaction proceeds at about 85 to about 105 °C, about 85 to about 95 °C, about 95 to about 105 °C, about 95 to about 115 °C, about 105 to about 115 °C, about 100 to about 105 °C, about 105 to about 110 °C, about 110 to about 115 °C, or any subrange therebetween.
In particular embodiments, the reaction proceeds at about 95 to about 115 °C, and the solvent is toluene.
In particular embodiments, the reaction proceeds at about 110 to about 115 °C, and the solvent is toluene.
J. Preparation ofG]from BB-I: H2N/\(>_(Hal)n\/ Rd Rd >4 M N \ o o —> H/\(>—(Hal)/ n About 1 equivalent of BB-l and about 1 to about 3 equivalents of J-l are combined in a reaction vessel. The compounds are dissolved in a polar non—protic solvent or an ic solvent. In certain embodiments, the compounds are dissolved is suspended in a polar otic solvent. In certain embodiments, the compounds are dissolved in an aromatic solvent. Exemplary polar otic solvent include, but are not limited to, acetonitrile, N,N-dimethylformamide, N,N-dimethylacetamide, 1,4- dioxane, and N—methylpyrrolidinone. Exemplary aromatic solvents include, but are not limited to, pyridine, toluene, xylene, benzene, and chlorobenzene. In still r embodiments, the nds are dissolved in a solvent mixture sing one or more polar non-protic solvents and/or one or more aromatic solvents. In certain embodiments, the compounds are dissolved in a t mixture comprising up to three, or up to two, polar non—protic solvents. In certain embodiments, the compounds are dissolved in a t mixture comprising up to three, or up to two, aromatic solvents.
In certain embodiments, the compounds are dissolved in a t mixture comprising up to three, or up to two, solvents from the group consisting of acetonitrile, N,N- dimethylformamide, N,N—dimethylacetamide, oxane, N—methylpyrrolidinone, pyridine, toluene, xylene, e, and chlorobenzene. In a further embodiment the compounds are dissolved in toluene.
In particular embodiments, each Hal is independently —F or -Cl. In a particular embodiment, Hal is —F In n embodiments, n = 1—3. In certain embodiments, n = 2. In certain embodiments, n = 3. In further embodiments, J-l is F F or F . In certain embodiments, J-l is HZN? H2N F F. In further embodiments, J-l is F.
In still further embodiments, J-l is in the form of a salt or co-crystal, such as, but not limited to a salt or co-crystal of hloric acid or tri?uoroacetic acid. In certain embodiments, J-l is a salt or co—crystal of methane sulfonic acid.
In certain embodiments, the reaction proceeds at about 65 to about 115 °C, about 75 to about 115 °C, about 85 to about 115 °C, about 95 to about 115 °C, about 105 to about 115 °C, about 65 to about 70 °C, about 70 to about 80 °C, about 80 to about 90 °C, about 90 to about 100 oC, about 100 to about 110 °C, about 110 to about 115 °C, or any subrange therebetween.
In certain ments, the solvent is d under d pressure. In particular embodiments, C-l is extracted from the crude residue by solvent extraction.
The resulting crude material is puri?ed using any suitable que, such as silica gel chromatography or crystallization to yield C-l.
In particular embodiments, the compounds are dissolved in an aromatic solvent, J-l is F F and the reaction proceeds at about 65 to about 115 °C.
In particular ments, the compounds are dissolved in toluene, J-l is H2N/j?>\ F F, and the reaction proceeds at about 100 to about 110 °C.
K. Preparation ofC-1from B-I.J-1 OH H2N \ | —(Hal)n | / AczdV N \ o O o —> H |/—(Ha|),, t 0 O O 7< 0w B-1.J-1 C-1 B-1.J-1, a solvent and an acid are combined in a reactor under conditions ive to produce C-l.
In certain ments, the acid is absent. In certain embodiments, the acid is a protic acid or a Lewis acid. In certain embodiments, protic acids include but are not limited to tri?uoroacetic acid, trichloroacetic acid, dichloroacetic acid, acetic acid, acetic acid, formic acid, hydrochloric acid, hydrobromic acid, para—toluenesulfonic acid and methane ic acid. In certain embodiments, Lewis acids include but are not limited to zinc chloride, magnesium bromide, magnesium triflate, copper e, and scandium tri?ate. In particular embodiments, the acid is tri?uoroacetic acid.
In n embodiments, about 10 equivalents, about 5 equivalents, about 1 equivalents, or about 0.1 equivalent of acid is used in the reaction of B-1.J-1 to form C- In certain embodiments, the solvent is toluene, heptane, water, 2- tetrahydrofuran, iso-propylacetate, N,N- dimethylformamide, N—methyl pyrrolidinone, methyl—tert—butyl ether, dimethylsulfoxide, n-butanol, acetonitrile, acetone, or a mixture thereof. In a particular embodiment, the t is acetonitrile.
In certain embodiments, B-1.J-1 is at a concentration ranging from about 2 to 40 mL/g, about 2 to 20 mL/g, about 5 to 15 mL/g. In a particular embodiment, B-1.J- l is at a concentration of about 10 mL/g.
In certain embodiments, the reaction mixture is heated to a temperature between about 20 and 110 °C, about 30 and 90 °C, about 40 and 80 °C, about 50 and 70 °C, about 55 and 65 °C, or about 58 and 61 °C. In a particular embodiment, the reaction mixture is heated to about 60 °C.
In certain embodiments, other additives are added to the reaction. In certain embodiments, the ves include but are not limited to lithium de, sodium chloride, and potassium chloride.
In certain embodiments, B—1.J-l is charged to the reactor in a single portion at about 20 °C followed by heating. In certain embodiments, B-l .J—l is charged to the reactor in portions over 1 hour during g.
In certain embodiments, the reaction is heated for about 1 to 24 hours, for about 2 to 12 hours, or for about 3 to 6 hours. In a particular embodiment, the reaction is heated for about 2.5 hours.
In n embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent tion, chromatography, crystallization or a combination thereof.
In certain embodiments, the reaction is cooled down and the reactor contents are partially distilled.
In certain embodiments, the organic phase is washed at least once with an aqueous solution. In certain embodiments, the aqueous solution contains about 23% NaCl, about 1.5% H2S04, and about 76% water. In certain embodiments, the aqueous solution contains about 20% NaCl.
In certain embodiments, a solution of the product is seeded with seeds of C- 1 which had been previously isolated. In certain ments, solid C-l is isolated by ?ltration.
In particular embodiments, each Hal is independently —F or —Cl. In a particular embodiment, each Hal is —F In certain embodiments, n = 1—3. In certain embodiments, n = 2. In certain embodiments, n = 3. In further embodiments, J-l is F F F F F or F. In certain embodiments, J-l is F In further embodiments, J-1 is F- In certain embodiments, R21 is (C1—C4)alkyl, (C6-C10)aryl, or (C6- C10)aryl(C1C4)alkyl. In certain embodiments, R21 is (C1-C4)alkyl. In certain embodiments, R3 is methyl.
In particular embodiments, R"1 is (C1-C4)alkyl, the solvent is acetonitrile, the reaction mixture is heated to about 60°C, and J-l is F F.
In particular embodiments, R21 is methyl, the solvent is acetonitrile, the on mixture is heated to about 60°C, and J-l is F F.
L. Enamineformationfrom C-I to provide D-I 0 RE ,Rb N O N \ — H( a)nI N \ o H/\© —> H | /—(Hal)n O‘Ra O C-1 Ra To a solution of C-1 and an acid in a solvent, about 0.5 to about 1.5 equivalent of an ted formamide acetal is added under conditions effective to e D-l.
In particular embodiments, one equivalent of C-1 is combined With about 1.1 lents of the alkylated formamide acetal.
In n embodiments, the alkylated formamide acetal is selected from the group consisting of ethylformamide dimethyl acetal, NN—dimethylformamide diethyl acetal, MN—dimethylformamide diisopropyl , N,N—diethylformamide dimethyl , and N,N—diisopropylformamide dimethyl acetal. In a particular embodiment, the alkylated formamide acetal is N,N—dimethylformamide dimethyl acetal.
In certain embodiments, the solvent is romethane, tetrahydrofuran, acetone, acetonitrile, ethyl acetate, isopropyl acetate, toluene, NN-dimethylformamide, MN—dimethylacetamide, 2-methyltetrahydrofuran or N-methyl-2—pyrrolidone. In a particular embodiment, the solvent is 2-methyltetrahydrofuran.
In certain embodiments, the acid is an organic acid. In certain embodiments, the organic acid includes, but is not limited to tri?uoroacetic acid, formic acid, acetic acid, sulfuric acid, tri?uoroacetic acid, trichloroacetic acid, and per?uoropropionic acid.
In certain embodiments, the acid is a mixture comprising up to three, or up to two, organic acids. In a particular embodiment, the acid is tri?uoroacetic acid.
In certain embodiments, the reaction mixture is heated to an al temperature of about 40 0C before adding the alkylated formamide acetal.
In certain embodiments, the reaction proceeds at about 0 to 75 °C, about 10 to 60 °C, about 20 to 50 °C, about 40 to 50 0C, or about 30 to 40 0C. In particular ments, the reaction proceeds at room temperature. In further embodiments, the reaction proceeds at about 40 °C.
In certain embodiments, the reaction proceeds for about 0.1 hours to about 12 hours, for about 0.1 hours to about 6 hours, for about 0.1 hour to about 3 hours, for about 0.1 hour to about 1 hour, or for about 0.2 hour to about 0.5 hour.
In certain embodiments, D—l is ted and purified by any suitable methods known in the art, including but not limited to solvent extraction, crystallization, and tography.
In certain embodiments, seeds of D-l are added and the mixture is stirred. In certain embodiments, the mixture is stirred at about 40°C for at least 1 hour.
In certain embodiments, about 0.2 to 0.6 equivalent of alkylated formamide acetal is added and the reaction e is agitated for at least about 25 minutes. The reaction mixture is cooled to room temperature and allowed to stir for about 12 hours.
In certain embodiments, the contents of the reactor are d, and the ?lter cake is rinsed with a solvent and dried to yield D-l. In certain embodiments, the solvent is a combination of 2—methyltetrahydrofuran and heptanes.
In particular embodiments, each Hal is independently —F or -Cl. In a ular embodiment, each Hal is -F In n embodiments, n = 1-3. In n embodiments, n = 2. In certain ments, n = 3.
In certain embodiments, R21 is (C1—C4)alkyl, (C6-C10)al‘yl, or (C6— C10)aryl(C1C4)alkyl. In certain embodiments, R2‘ is (C1-C4)alkyl. In certain embodiments, Ra is methyl.
In certain embodiments, each Rb is independently (C1-C4)alkyl, (C5-C10)aryl, or (C6-C10)aryl(C1C4)alkyl. In certain embodiments, each Rb is independently (C1- C4)alkyl. In certain embodiments, Rb is methyl.
In particular embodiments, Rb is (C1—C4)alkyl, R3 is (C1-C4)alkyl, the alkylated ide acetal is N,N-dimethylformamide dimethyl acetal, the t is 2- methyltetrahydrofuran, the on proceeds at about 10 to about 60 0C, the acid is tri?uoroacetic acid, each Hal is —F and n=3.
In particular embodiments, Rb is methyl, Ra is methyl, the alkylated formamide acetal is N,N—dimethylformamide dimethyl acetal, the solvent is 2- methyltetrahydrofuran, the reaction proceeds at about 40 0C, the acid is tri?uoroacetic acid, Hal is —F and n=3.
M. Formation ofF-Ifrom D-I h E-I RENR" 0 £1 R10 OR1 \ 0R1 N \ N \ N \ H | —(HaI)n K-1 H H | n / / o O O‘Ra O‘Ra E-1 O R2OJYORZ R10 OR1 To a solution of D-1 in a t, is added about 1.1 equivalent of K-l under conditions ive to produce E-l.
In certain embodiments, the solvent is an alcoholic solvent such as, but not limited to ethanol, n-propanol, 2-propanol, butanol, methanol and tert-butanol, or an aprotic polar organic solvents such as, but not limited to 2—methyl tetrahydrofuran, ydrofuran, acetone, acetonitrile, MN—dimethylformamide, N,N— dimethylacetamide, 1,4-dioxane, and N—methylpyrrolidinone. In particular embodiments, the solvent is methanol.
In certain embodiments, K-l is an aminoacetaldehyde acetal such as, but not limited to, aminoacetaldehyde diethylacetal, aminoacetaldehyde dipropylacetal, Aminoacetaldehyde dimethylacetal, and aminoacetaldehyde dibutalacetal. In certain embodiments, K-l is aminoacetaldehyde dimethylacetal.
In certain embodiments, the reaction proceeds at about 10 to 60 °C, about 10 to 50 °C, about 10 to 40 °C, about 10 to 30 °C, about 10 to 20 °C, 20 to 60 °C, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 oC, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 °C, about 40 to 60 °C, about 40 to 50 °C, about 50 to 60 °C, or any subrange therebetween. In particular embodiments, the reaction proceeds at room temperature. In further ments, the on proceeds at about 16 °C to about 23 In certain embodiments, the reaction is stirred for about 0.1 to about 12 hours, about 0.5 to about 4 hours, about 1 to about 2 hours.
Once the reaction has progressed suf?ciently to produce E-l, M—l is added to the reaction mixture.
In certain embodiments, about 1 to about 10 or about 1 to about 5 equivalents of M-l is added. In a particular embodiment, about 5 equivalents of M—l is added.
In certain embodiments, M-l is dimethyl e, diethyl oxalate, dipropyl oxalate, or dibutyl oxalate. In a particular embodiment, M-l is dimethyl oxalate.
The reaction mixture is stirred at a temperature suf?cient to e dissolution of M-l. In certain ments, the reaction mixture is stirred at about 20— 80°C, at about C, at about 20—60°C, at about 30—60°C, at about 40—50°C or at about 45°C.
In certain embodiments, a base is added to the reaction mixture following the addition of M—l.
In certain embodiments, the base is a metal hydride, an alkoxide, an inorganic carbonate, or a bis(trialkylsilyl) amide. In certain embodiments, the base is a metal hydride. In certain embodiments, the base is an de. In certain embodiments, the base is an inorganic carbonate . In certain embodiments, the base is a bis(trialkylsilyl) amide. Exemplary metal hydrides include, but are not limited to lithium hydride, sodium hydride, and potassium hydride. Exemplary alkoxides include, but are not limited to, sodium methoxide, sodium tert-butoxide, sodium de, potassium tert—butoxide, potassium ethoxide, sodium entoxide, and lithium tert- butoxide. ary bis(trialkylsilyl) amide bases include, but are not limited to lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, and potassium bis(trimethylsilyl)amide. Exemplary carbonates include, but are not limited to lithium, sodium, potassium, and cesium carbonate.
In still further embodiments, the base is a e of at least one of the foregoing bases. In certain embodiments, the base is a mixture of up to three, or up to two, metal hydrides. In certain embodiments, the base is a mixture ofup to three, or up to two, alkoxides. In certain embodiments, the base is a mixture of up to three, or up to two, metal bis(trialkylsilyl) amides. In certain embodiments, the base is a mixture of up to three, or up to two, of the following bases: lithium hydride, sodium hydride, potassium hydride, sodium methoxide, sodium tert-butoxide, sodium ethoxide, ium tert—butoxide, potassium ethoxide, sodium entoxide, lithium tert- butoxide, lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, and potassium bis(trimethylsilyl)amide.
In particular embodiments, the base is sodium methoxide. In particular ments, the base is sodium methoxide in solution in methanol.
In n embodiments, after the addition of the base, the reaction is heated to about 20 to 80 °C, 20 to 70 °C, about 20 to 60 °C, about 20 to 50 °C, about 20 to 40 °C, about 20 to 30 °C, about 30 to 80 oC, about 30 to 70 °C, about 30 to 60 °C, about 30 to 50 °C, about 30 to 40 °C, about 40 to 80 °C, about 40 to 70 oC, about 40 to 60 °C, about 40 to 50 °C, about 50 to 80 °C, about 50 to 70 °C, about 50 to 60 °C, about 60 to 80 °C, about 60 to 70 °C, about 70 to 80 °C, or any subrange therebetween. In a particular embodiment, the reaction is heated to about 42 to 48 °C. In a particular embodiment, the reaction is heated to about 45 °C.
In certain embodiments, the on is stirred for about 1 to about 24 hours, about 6 to about 24 hours, about 12 to about 20 hours, about 14 to about 18 hours.
In certain embodiments, the reaction is diluted with an aqueous solution and F-l is extracted and d by any suitable methods known in the art, including but not limited to solvent extraction, crystallization, and silica gel chromatography.
In certain embodiments, the temperature is reduced to about 34 — 37 °C over the course of about 1 hour, optionally charged with F-l seed crystals and d to age for about 1 — 2 hours. At this point, water is added and temperature is reduced to about 18 — 22 °C over 1 hour. The resulting slurry is ?ltered.
In certain embodiments, liquors are recycled to displace solids remaining in the reactor. The collected solids on the ?lter are then washed with a 1:1 mixture of water and methanol, followed by water. The collected wet cake is dried in a vacuum oven at about 36 — 42 °C for about 16 hours, providing F-l. [03 30] In certain ments, R1 is (C1—C4)alkyl, (C6-C1o)aryl, or (Cg—Cio)aryl (C1-C4)alkyl. In certain embodiments, R1 is C1-C4alkyl. In further ments R1 is — CH3, that is, K-l is aminoacetaldehyde dimethyl acetal.
In certain embodiments, R2 is (C1-C4)alkyl, (C6—C10)aryl, or (C6-C10)aryl (C1-C4)alkyl. In certain embodiments, R2 is C1-C4alkyl. In n embodiments, R2 is — [03 32] In particular embodiments, each Hal is ndently —F or —Cl. In a particular embodiment, Hal is -F In certain embodiments, n = 1-3. In certain embodiments, n = 2. In certain embodiments, n = 3. [03 33] In certain embodiments, R3 is (C1—C4)alkyl, (C6—C1o)aryl, or (C6— Cio)aryl(C1C4)alkyl. In certain embodiments, Ra is (C1-C4)alkyl. In certain embodiments, R8 is methyl. [03 34] In certain ments, each Rb is independently (C1—C4)alky1, (C6—C10)aryl, or (C6-Clo)aryl(C1C4)alkyl. In certain embodiments, each Rb is independently (C1- C4)alkyl. In certain embodiments, Rb is methyl. [03 35] In particular embodiments, Rb is methyl, R21 is (C1-C4)alkyl, each Hal is —F, n=3, R2 is )alkyl, R1 is (C1—C4)alkyl, the solvent is an alcoholic solvent, K—l is aminoacetaldehyde dimethylacetal, the ?rst on proceeds at about 2 to about 40 °C, the second reaction is heated to about 20 to about 80°C, the base is n de, and M—1 is dimethyl oxalate [03 36] In particular embodiments, Rb is methyl, Ra is methyl, Hal is —F, n=3, R2 is — CH3, R1 is —CH3, the solvent is ol, K-l is aminoacetaldehyde dimethylacetal, the ?rst reaction proceeds at about 16 to about 23 °C, the second reaction is heated to about 45°C, the base is sodium methoxide, and M-1 is dimethyl oxalate N. Acetal hydrolysis 0fF-I toform FF-I [03 37] To a solution of F-l in a solvent, is added about 0.1 to 1 equivalent of a ?rst acid and about 2 to 20 lents of a second acid under ions effective to produce FF-l.
In some embodiments, about 0.1 to 0.5 equivalent of the ?rst acid is added.
In particular embodiments, about 0.1 equivalent of the ?rst acid is added.
In some embodiments, the solvent is a polar organic solvent or a weak protic acid. In some embodiments, the polar organic solvent include, but is not limited to propionitrile, tetrahydroduran, oxane, acetonitrile and ethyl acetate. In some embodiments, the weak protic acid include, but is not limited to formic acid, propionic acid and butyric acid. In a particular embodiment, the solvent is acetonitrile.
In some embodiments, the ?rst acid is a strong protic acid including, but not limited to esulfonic acid, sulfuric acid, hydrochloric acid, tri?uoroacetic acid, p- Toluenesulfonic acid and camphorsulfonic acid.
In a particular embodiment, the ?rst acid is enesulfonic acid. In a ular embodiment, the ?rst acid is p—Toluenesulfonic acid monohydrate.
In some embodiments, the second acid is a weak protic acid including, but not limited to acetic acid, formic acid, propionic acid and butyric acid. In a particular embodiment, the second acid is acetic acid.
The reaction is then heated to about 20 to 120 °C, about 40 to 100 °C, about 60 to 80 °C, or about 70 to 80 °C. In a particular embodiment, the reaction is heated to about 75 0C.
In certain embodiments, the reaction is stirred for about 1 to about 24 hours, for about 4 to about 14 hours, for about 8 to about 10 hours.
In certain embodiments, water is added to the on mixture.
In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In certain embodiments, the mixture is concentrated under reduced re to remove the solvent. The resultant slurry is then aged at room temperature for about 2 hours, ?ltered and washed with water. The cake is dried in a vacuum oven at 50 0C for at least 10 hours to give FF-l.
In certain embodiments, R1 is (C1—C4)alkyl, (C6-C10)aryl, or (C6—C10)aryl (C1-C4)alkyl. In certain embodiments, R1 is C1-C4alky1. In further embodiments R1 is — In certain embodiments, R2 is (C1—C4)alkyl, (Ce-Clo)aryl, or o)aryl (C1-C4)alkyl. In n ments, R2 is C1-C4alky1. In certain embodiments, R2 is — [03 50] In particular embodiments, each Hal is ndently —F or -Cl. In a particular embodiment, Hal is -F In certain embodiments, n = 1-3. In certain embodiments, n = 2. In n embodiments, n = 3.
In certain embodiments, Ra is (C1-C4)alkyl, (C6-C10)aryl, or (C6- C10)aryl(C1C4)alkyl. In certain embodiments, R3 is (C1-C4)alkyl. In n embodiments, R3 is methyl. [03 52] In particular embodiments, R3 is (C1—C4)alkyl, each Hal is —F, n=3, R2 is (C1- C4)alkyl, R1 is (C1-C4)alkyl, the reaction is heated to about 20 to aout 120 °C, the ?rst acid is p-Toluenesulfonic acid, the second acid is acetic acid, and the solvent is acetonitrile. [03 53] In particular ments, R3 is methyl, Hal is —F, n=3, R2 is —CH3, R1 is — CH3, the reaction is heated to about 75 0C, the first acid is p-Toluenesulfonic acid, the second acid is acetic acid, and the solvent is acetonitrile.
O. Cyclization ofFF-I and N-I toform G-I HO O HO OH \E 0 N \ E L \ / R20 N | \—(Hal)n NH2 o N-1 QWH?—(Hann0 N \ / O O Q o O‘Ra The starting material FF-l, N-l, or a salt or tal thereof, and an additive are combined with a solvent under conditions effective to produce G-l.
In certain embodiments, the additive is a carboxylate salt such as, but not limited to sodium acetate, potassium acetate, m acetate, sodium propionate, and potassium propionate. In certain embodiments, the additive is a carbonate such as, but not limited to sodium carbonate, potassium carbonate, lithium carbonate, and cesium carbonate. In certain embodiments, the additive is a water scavenger such as but not limited to molecular sieves, trimethyl orthoacetate, and trimethyl orthoformate. In particular embodiments, the ve is potassium acetate. [03 56] In certain embodiments, about 1 to about 2 or about 1 to about 1.5 equivalents of N—l or a salt or co-crytal thereof, is used. [03 57] In certain embodiments, about 1 to about 5 equivalents of ve are used.
In ular embodiments, about 2.5 equivalents of additive is added.
In certain embodiments, the solvent is acetonitrile, ethyl acetate, e, 2- methyl tetrahydrofuran, isopropyl acetate, dichloromethane, or a e thereof. In ular embodiments, the solvent is dichloromethane. [03 59] In certain embodiments, the reaction is stirred at about 0 to about 40 °C, about 10 to about 30 °C, about 15 to about 25 °C, about 20 °C, In certain embodiments, G-l is extracted and optionally puri?ed by any suitable que known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In particular embodiments, the reaction mixture is washed with an aqueous solution and evaporated to dryness. In particular embodiments, the residue is dissolved in ylfonnamide and the resulting solution is added to water over about 2 hours, while agitating. The product slurry is aged at about 20 0C for about 12 hours and filtered. The product cake is washed with water and dried to afford G-l.
In certain embodiments, N-l is in solution when added to the reaction In further embodiments, L is —CH2—CH2—.
In particular embodiments, N-l is (lR,3 S)aminocyclopentan-l-ol: \O‘NHz In particular embodiments, N-l is a free base or is synthesized and used without isolation.
In particular ments, N-l is a salt or co-crystal. le salts or co— crystals of N-1 include, but are not limited to, benzoic acid, acetic acid, fumaric acid, methanesulfonic acid, p-toluenesulfonic acid, oxalic acid, hydrochloric acid, naproxen, S-naproxen, R-naproxen, mandelic acid, elic acid, and S-mandelic acid.
HO 0 GM, ° H0HO" In still further ments, N-l is O \|:>—NH O "OHOH HO HO 2 UNHz ' HC' \O‘NHZ 0 HCI 7 7 7 O O HO HO OH OH HO HO UNHZ o UNHZ o O O HO, HO, OH OH Ho HO UNHZ o \O—NHZ o HO O OH HO HO UNHZ o UNHZ o HO OH \O‘NHZ 0O HO O \O‘NHZ o O | or In particular embodiments, N-1 is a salt or co-crystal with benzoic acid.
In particular embodiments, N-1 is D‘NHz In particular embodiments, each Hal is independently —F or -Cl. In a particular embodiment, each Hal is -F In certain embodiments, n = 1—3. In certain embodiments, n = 2. In certain embodiments, n = 3.
In n embodiments, R2 is )alkyl, 0)aryl, or (C6-C10)aryl (C1-C4)alkyl. In certain embodiments, R2 is C1-C4alkyl. In certain embodiments, R2 is — In certain embodiments, Ra is (C1—C4)alkyl, (Cs—Cio)aryl, or (C6— C10)aryl(C1C4)alkyl. In certain embodiments, R‘11 is (C1-C4)alkyl. In n embodiments, R3 is methyl.
In particular embodiments, R3 is )alkyl, each Hal is —F, n=3, R2 is — . \O‘NHZ . CH3, N-l . . . . 1s the solvent 1s dichloromethane, the reaction is stirred at about 0 to about 40 °C and the ve is potassium acetate.
In particular embodiments, Ra is methyl, Hal is —F, n=3, R2 is —CH3, N-l is the solvent IS d1chloromethane, the reactlon ls st1rred at about 20 °C and the additive is potassium acetate.
P. Conversion of (-)-Vince lactam to b-I through a-I NH (1) enation O (2) Protection ( - _) Vince lactam_ b—1 PG=protecting group A catalyst, a solvent and (—)-Vince lactam are stirred in a reactor, which is purged with an inert gas. A source of hydrogen is added.
In certain embodiments, the hydrogen source is formic acid, hydrazine, dihydronapthalene, dihydroanthracene, hydrogen gas, or Hantzch ester and isopropanol.
In ular ments, the hydrogen source is hydrogen gas.
In certain embodiments, the catalyst is a platinum catalyst such as PtOz, a nickel catalyst such as Raney Nickel, a rhodium catalyst such as RhCl(PPh3)3, a palladium catalyst, a ruthenium catalyst such as s catalyst or an iridium catalyst such as Crabtree’s catalyst. In some embodiments, the catalyst is selected form the group consisting of Pd/C, PtOZ, Raney Nickel, RhCl(PPh3)3, Nyori’s catalyst, and ee’s catalyst. In particular embodiments, the catalyst is Pd/C. [03 78] In certain embodiments, the solvent is a polar aprotic solvent such as THF, 2—MeTHF, e, diethyl ether, diisopropyl ether, DME, MTBE, CPME, EtOAc, and DCM. In certain embodiments, the solvent is a polar protic solvent such as methanol, ethanol, n-butanol, and panol. In particular ments, the solvent is 2— methyltetrahydrofuran.
In certain embodiments, the reaction is stirred at about 0 to 65 °C, about 10 to 55 oC about 15 to 45 oC, about 20 to 40 OC, about 25 to 35 °C.
In certain embodiments, the reactor is maintained at about 0.30 to about 0.35 In certain embodiments, the reaction takes place over about 1 to about 24 hours, about 1 to about 12 hours, about 3 to about 9 hours, about 6.5 hours. [03 82] In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not d to solvent extraction, tography, crystallization or a combination f.
In certain embodiments, the reaction is ?ltered through celite washed with 2- MeTHF to yield the hydrogenated t in solution. [03 84] In certain embodiments, to a solution of the hydrogenated product, a second catalyst is added, as well as an activated source for a protecting group. [03 85] In certain embodiments, the second catalyst is a nucleophilic amine- containing compound such as imidazole, derivatives of 4-dimethylaminopyridine, 1,4- diazabicyclo[2.2.2]octane, 1,8-diazabicyclo[5.4.0]undec—7—ene, and ne, or a nucleophilic phosphine containing compound such as triphenylphosphine. In particular embodiments, the second catalyst is thylaminopyridine (DMAP). [03 86] In certain embodiments, the activated source of protecting group is BoczO.
In particular embodiments, B0020 is prepared in on in 2-MeTHF.
In certain embodiments, the protecting group is Boc.
In certain embodiments, the reaction occurs in a polar aprotic t such as THF, EtOAc, DCM, acetonitrile or 2-MeTHF. In particular ments, the reaction occurs in 2-MeTHF.
In certain embodiments, the reaction occurs at temperatures in the range from about 20 to 80 °C, about 25 to 70 °C, about 35 to 60 °C, about 45 to 50 °C.
In n embodiments, the reaction occurs for about 0.5 to about 12 hours, about 1 to about 6 hours, about 1 to about 3 hours, about 2 hours.
In n embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In certain embodiments, the solution is concentrated and a second solvent is added.
In certain embodiments, the second solvent is a polar c solvent such as THF, Dioxane, DME, diisopropyl ether, diethyl ether, MTBE, CPME, 2-MeTHF and toluene. In particular embodiments, the second solvent is 2-MeTHF.
In certain embodiments, the solution is maintained at about —50 to 30 °C, about —50 to 30 °C, about —30 to 20 °C, about —20 to 10 °C, about -10 to 0 °C.
Following hydrogenation and addition of the ting group PG, a nucleophile R3M is added to the reaction mixture.
In certain embodiments, nucleophile R3M is a n-alkyl Grignard reagent such as ethylmagnesium halides, n-propylmagnesium halides, and n—butylmagnesium halides or an organolithium reagent such as methyl lithium, n—butyllithium, and llithium.
In particular ments, the nucleophile is methyl magnesium bromide.
In certain embodiments, nucleophile R3M is added, while maintaining the reaction within the desired temperature range, over about 1 to about 12 hours, about 3 to about 9 hours, about 5 to about 7 hours, about 6 hours. After the addition is complete, the mixture is stirred for an additional about 0.5 to about 12 hours, about 0.5 to about 6 hours, about 0.5 to about 4 hours, about 1 to about 2 hours.
In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable que known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a ation thereof.
In certain embodiments, following addition of nucleophile R3M, 15% aqueous ACOH is added while maintaining the temperature at about 0 to 5 0C to adjust the pH to approximately 7. The layers are separated and the organic layer is washed with water twice. The organic layer is concentrated to 4 to 5 Volumes under reduced re at about :45 °C. The solution is azeotroped with 2-MeTHF. The ?nal solution is concentrated under reduced pressure to about 2.5 to 3 Volumes and n—Heptane is slowly added while maintaining the temperature at 30 to 35 0C. In certain embodiments, b—l seeds are added and the mixture is stirred at about 30 to 35 °C for about 5 to 10 hours.
In certain embodiments, additional n-heptane is added while maintaining the temperature at 30 to 35 °C over approximately 5 h. The contents are cooled to —5 to 0 °C and held for approximately 1 to 2 hours. The t is collected by ?ltration, washed with n—heptane at —5 to 0 0C, and dried under d pressure at 40 to 45 °C to afford b-l.
In particular embodiments, the hydrogen source is hydrogen gas, the catalyst is a palladium catalyst, the solvent for the enation is yltetrahydrofuran, the hydrogenation reaction is stirred at about 0 to about 65 0C, the second catalyst is a nucleophilic amine-containing nd, the activated source of ting group is Boc20, the protection reaction occurs in 2—MeTHF at about 25 to 70 °C, the second solvent is F, and the nucleophile is methyl magnesium bromide.
In particular embodiments, the hydrogen source is hydrogen gas, the catalyst is Pd/C, the solvent for the hydrogenation is 2-methyltetrahydrofuran, the hydrogenation reaction is stirred at about 25 to 35 0C, the second catalyst is 4- Dimethylaminopyridine, the activated source of protecting group is BoczO, the protection reaction occurs in 2—MeTHF at about 45 to 50 °C, the second solvent is 2- MeTHF, and the nucleophile is methyl magnesium bromide.
Q. Conversion ofb-I to c-I (1) oxidant (2) hydronSIs To a solution of b-l in a solvent, an oxidant is added and the reaction is stirred.
In certain ments, PG is a protecting group. In certain embodiments, the protecting group PG is B00.
In certain ments, the solvent is a polar aprotic solvent such as DCM, 1,2-dichloroethane, e, chlorobenzene, robenzene, chloroform, carbon tetrachloride and DMF, or a polar protic solvent such as water, acetic acid, methanol, and ethanol. In particular ments, the solvent is toluene.
In certain embodiments, the oxidant is en peroxide, oxone, t-butyl hydrogen peroxide, tri?uoroperacetic acid (TFPAA), nitroperbenzoic acid, monopermaleic acid (MPMA), monoperphthalic acid, monoperphthalic acid ium salt, persulfuric acid, performic acid, peracetic acid, perbenzoic acid, a silylated peracid, benzeneperoxyseleninic acid, sodium perborate, meta— chloroperoxybenzoic acid, or a resin-bound peracid. In particular embodiments, the oxidant is meta—chloroperoxybenzoic acid (mCPBA).
In certain embodiments, mCPBA is added in several portions every 4 to 6h.
In n embodiments, the reaction is stirred within the temperature range of -10 to 50 °C, 0 to 40 °C, 10 to 45 °C, 15 to 40 °C, 20 to 35 °C, 25 to 30 °C.
In certain embodiments, the reaction is stirred for l to 48h, 6 to 36h, 10 to In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In ular embodiments, 20% NaHSO3 is added, then 10% NaOH is added. The organic layer is washed with water and concentrated to afford the oxidized product in solution.
To a solution of the oxidized t, is added water, a solvent and a base or an acid.
In certain embodiments, the solvent is a polar protic solvent such as methanol, ethanol, panol or water, or a combination of at least one polar aprotic solvent with a polar c solvent such as THF, Dioxane, DME, disopropylether, diethyl ether, MTBE, CPME, or toluene. In particular embodiments, the solvent is a combination of toluene, methanol, and water.
In certain embodiments, the base is an hydroxide base such as m hydroxide, sodium hydroxide and potassium hydroxide or a silanolate base such as sodium trimethylsilanolate and potassium trimethylsilanolate. In particular embodiments, the base is lithium hydroxide.
In certain embodiments, the acid is a concentrated strong acid such as sulfuric and hloric acid.
In certain embodiments, the reaction is stirred at about 0 to 80 oC, about 5 to 70 °C, about 10 to 60 °C, about 15 to 50 °C, about 20 to 40 °C, about 25 to 30 °C.
In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In particular embodiments, toluene and 25% NaCl are added and the layers separated. The organic layer is washed with a solution of 20% NaCl adjusted to about pH 7 to about pH 8 with 1 N HCl. The organic layer is ?ltered and concentrated.
Toluene is added and the distillation continued. Toluene and active carbon are added.
The mixture is warmed to about 30 to about 40 °C and stirred for about 2 to 6 h. The contents are , filtered through celite and washed with toluene. The filtrate is concentrated. n—heptane is added over about 1 to 2 hours and the mixture is optionally seeded with c-1 and d for an additional approximately 2 to 3 hours. n-heptane is added and the mixture is stirred for about 2 to 3 h. The mixture is cooled to about 10 to OC and stirred for an additional approximately 3 to 5 h. The product is collected by ?ltration and washed with n-heptane at about 10 to 15 oC. The product is dried to afford c-l.
In particular embodiments, the ting group PG is Boc, the solvent is a polar aprotic solvent, the oxidant is mCPBA, the reaction is stirred at 10 to 45 °C, the hydrolysis occurs in a combination of toluene, methanol, and water at about 10 to 60 °C, and the base is an hydroxide base.
In particular embodiments, the protecting group PG is Boc, the t is toluene, the oxidant is mCPBA, the reaction is stirred at 25 to 30 °C, the hydrolysis occurs in a combination of toluene, methanol, and water at about 25 to 30 °C, and the base is lithium hydroxide.
R. Resolution ofc-Ia — Selective Acylation FNHBoc NHBoc FNHBoc NHBoc NHBoc H010 O , H013 # H00 , RAOD cc—1b cc—1a cc—1b e—1 cc—1a c—1a (+/—): racemic mixture of cc—1 b and cc-1a In n embodiments, enantioenriched cc-la is obtained through tically catalyzed selective acylation.
In this process, the racemic starting al c-1a is a mixture of cc-lb and cc-la (i.e., c—la (+/—) and is dissolved in a solvent.
In certain embodiments, the solvent is a polar aprotic solvent, a non-polar solvent, a polar protic solvent, a mixture of organic ts with aqueous buffers or a e f. ary polar aprotic solvents include but are not limited to diethyl ether, diisopropyl ether, methyl t—butyl ether, 2-methyltetrahydrofuran, tetrahydrofuran, dichloromethane and chloroform. Exemplary non-polar solvents include but are not limited to toluene, hexane and heptane. Exemplary polar protic solvents e but are not limited to t-butanol. In particular embodiments, the solvent used is toluene.
Once the racemic ng material c-la is dissolved in the solvent, about 1 equivalent of an acyl donor is added. In certain embodiments, the acyl donor is an anhydride or an ester. In certain ments, the anhydride include but is not limited to ic ide and acetic anhydride. In certain embodiments, the ester include but is not limited to vinyl acetate, isopropenyl acetate, 4-chlorophenyl acetate and ethyl methoxy acetate. In particular embodiments, the acyl donor is glutaric anhydride.
In certain embodiments, Rx is (C1-C6)alkyl-Ry and Ry is selected from the group consisting of H, CN, —NRZlR22 — , C(O)R21, —C(O)ORZ1, —C(O)NRZlRZZ, OC(O)NR21RZZ, (O)RZ2, —NRZIC(O)NRZZ,—NR21C(O)ORZZ, —SR", —S(O)1.2R21, —S(O)2NR21RZZ, —NRzls(O)2RZ2 and OR".
, NRZIS(O)2RZZ, In certain embodiments, R21 and R22 are independently selected from the group consisting of H, C1_6alkyl, C2_6alkenyl, C2_6alkynyl, C1_6heteroalkyl, C3. locycloalkyl, 3 to 12 membered heterocyclyl, C6_1oaryl and 5 to 10 membered heteroaryl.
In certain embodiments, RX is (C1-C4)alkyl-Ry and Ry is selected from the group consisting of H and COZH.
In certain embodiments, Rx is methyl or (CH2)3—COZH. In n embodiments, RX is (CH2)3-COZH.
About 15 % by weight of an enzyme is added. In certain embodiments, the enzyme is a lipase. In certain ments, the lipase includes but is not limited to Novozyme 435, CAL-A, CAL—B, PPL, PSL-C, PSL, CRL and MML. In certain embodiments, the lipase includes but is not limited to CAL-A, CAL—B, PPL, PSL—C, PSL, CRL and MML. In particular embodiments, the enzyme used is Novozyme 435.
In certain ments, the reaction is allowed to stir for about 1 to 48h for about 6 to 48h, for about 12 to 30h, for about 20 to 26h, for about 23h.
In certain embodiments, the on is allowed to stir at about 0 to 60 °C at about 5 to 30 °C, at about 10 to 15 °C.
In certain ments, additional enzyme is added and the reaction is allowed to proceed for about 1 to 48h at about 0 to 60 0C. In certain embodiments, about 5 % by weight of additional enzyme is added and the reaction is allowed to proceed for about 6 to 24h at about 5 to 30 °C. In particular embodiments, additional enzyme is added and the reaction is allowed to proceed for about 12h at about 10 to 15 In certain embodiments, the ester formed e—l is extracted and ally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In n embodiments, precipitated enzyme solids are removed by ?ltration and rinsed with solvent. The desired e-l is extracted into a basic aqueous layer such as aqueous Na2C03. The aqueous is washed with an organic solvent (such as MTBE) to remove undesired material. A t (such as THF) is then added to the aqueous layer, which ns e-l, followed by hydroxide.
In certain embodiments, the solvent is a polar aprotic solvent. Exemplary polar aprotic solvent include but are not limited to l ether, diisopropyl ether, methyl t-butyl ether, 2—methyltetrahydrofuran, tetrahydrofuran, dichloromethane and chloroform. In particular embodiments, the solvent is THF.
Exemplary sources of hydroxide include but are not limited to sodium ide, potassium hydroxide and lithium hydroxide. In particular embodiments, the source of hydroxide is sodium hydroxide.
In certain embodiments, the mixture is allowed to stir for about 1 to 24h at about 0 to 60 °C. In certain embodiments, the mixture is allowed to stir for about 1 to 12h at about 5 to 30 °C. In particular embodiments, the e is allowed to stir for about 4 h at about 15 to 20 °C.
In certain embodiments, the product cc-la is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not d to solvent extraction, chromatography, crystallization or a combination thereof.
In particular embodiments, the layers are separated, and the organic layer is concentrated.
In certain embodiments, the c phase is concentrated and cc-la is tallized in a solvent with the addition of seeds of cc-la. In certain ments, the solvent is a mixture of THF, dichloromethane and water, and the recrystallization is conducted at about 40 to 50°C.
In certain embodiments, the omeric excess (%ee) of the product is about 50 to 100, about 75 to 100, about 90 to 100, about 95 to 100, about 98 to 100, about 98.5 to 100, about 98.5 to 99, about 99 to 100, about 99.5 to 100, about 99.9 to In particular embodiments, c-la is dissolved in a ar solvent, the acyl donor is glutaric ide, RX is (CH2)3-COZH, the enzyme used is a lipase, the reaction is stirred at about 10 to 15 °C, cc-lb is removed by ?ltration, the hydrolysis occurs in THF at about 5 to 30 °C, and the source of hydroxide is sodium hydroxide.
In particular embodiments, c—la is dissolved in toluene, the acyl donor is glutaric anhydride, Rx is (CH2)3—COZH, the enzyme used is Novozyme 435, the reaction is stirred at about 10 to 15 °C, cc—lb is removed by ?ltration, the hydrolysis occurs in THF at about 15 to 20 °C, and the source of hydroxide is sodium hydroxide.
S. Resolution ofc-Ia — Selective Hydrolysis NHBOC NHBoc NHBoc NHBoc O 0 0 HO\" + —> HO RXJLO",© + RXJLO cc—1 b 00-1 a e—1 (+/-) ee—1: racemic mixture of e-1 and e—2 c—1a (+/—): racemic mixture of cc—1 b and cc—1a ‘ NHBoc NHBoc O : RX’ILO\\‘© + H0 :f cc—1a In certain embodiments, enantioenriched cc-1a is ed through enzymatically catalyzed selective hydrolysis.
A mixture of the starting material, c—la, an acyl donor, a base and a catalyst in a solvent, is stirred.
In certain embodiments, the acyl donor includes but is not limited to an anhydride or an acid de. In certain embodiments, the anhydride es but is not limited to succinic anhydride and acetic anhydride. In certain embodiments, the acid chloride include but is not limited to acetyl chloride and benzoyl chloride. In particular embodiments, the acyl donor is glutaric anhydride.
In certain embodiments, Rx is (C1—C6)alkyl-Ry and Ry is selected from the group consisting of H, CN, —NR21R22, C(O)RZI, —C(O)ORZI, —C(O)NRZIRZZ, — OC(O)NR21RZZ, —NR21C(O)RZZ, —NR21C(O)NRZ2, —NR21C(O)ORZ2, —SRZ1, —S(O)1.2Rzl, —S(O)2NR21RZZ, —NRzls(0)2RZ2 and 01121.
, NRZIS(O)2RZZ, In certain embodiments, R21 and R22 are independently selected from the group consisting of H, C1_6alkyl, C2_6alkenyl, C2_5alkynyl, C1_6heteroalkyl, C3. oalkyl, 3 to 12 membered heterocyclyl, C6_10aryl and 5 to 10 membered heteroaryl.
In n embodiments, RX is (C1-C4)alkyl-Ry and Ry is selected from the group ting of H and COZH.
In certain embodiments, Rx is methyl or (CH2)3-C02H. In certain embodiments, RX is (CH2)3—COZH.
In certain embodiments, the catalyst includes but is not limited to nucleophilic amine—containing compounds and nucleophilic phosphine ning compounds. In certain embodiments, the nucleophilic containing compounds include but are not limited to imidazole, derivatives of thylaminopyridine, 1,4- diazabicyclo[2.2.2]octane, 1,8-diazabicyclo[5.4.0]undecene, and pyridine. In certain embodiments, the nucleophilic phosphine containing compounds include but are not limited to triphenylphosphine. In particular ments, the catalyst is 4- dimethylaminopyridine.
In certain ments, the base includes but is not limited to amine bases, aromatic amine bases, inorganic carbonates, metal hydrides and alkoxides. In certain embodiments, the amine bases include but are not limited to N,N— diisopropylethylamine, quinuclidine, 1,4-diazabicyclo[2.2.2]octane, 1,8- diazabicyclo[5.4.0]undecene, tripropylamine, and tributylamine. In n embodiments, the aromatic amine bases include but are not limited to pyridine. In certain ments, the inorganic carbonate bases include but are not d to lithium carbonate, sodium carbonate, potassium carbonate, and cesium carbonate. In certain embodiments, the metal hydride bases include but are not limited to sodium hydride, and potassium hydride. In certain embodiments, the alkoxide bases include but are not limited to sodium methoxide, sodium tert—butoxide and lithium tert-butoxide. In particular embodiments, the base is pyridine.
In certain embodiments, the solvent is an aromatic solvent or a polar non- protic solvent. In certain embodiments, the aromatic solvent includes but is not d to pyridine, toluene, xylene, benzene, and chlorobenzene. In certain ments, the polar non-protic solvent includes but is not limited to N,N—dimethylformamide, N,N— dimethylacetamide, oxane, N—methyl-2—pyrrolidinone, and dichloromethane. In ular embodiments, the solvent is ne.
In certain embodiments, the reaction mixture is stirred for about 1 to 48h, for about 6 to 24h, for about 12h.
In n embodiments, the reaction mixture is stirred at about 0 to 120 °C, at about 20 to 100 °C, at about 40 to 80 °C, or at about 60 °C.
In certain embodiments, the product ee-l is extracted and optionally puri?ed by any le que known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In particular embodiments, the reaction mixture is evaporated to dryness, dissolved in DCM and washed with a 0.2 M HCl aqueous solution. The organic layer is evaporated to dryness. The e is stirred with water and the pH adjusted to about 7.8 with a 2 M NaOH solution. The water layer is washed with DCM. The water layer is then acidi?ed to pH 4 with 3 N HCl aqueous solution and extracted DCM. The ed organic layers are dried over NaZSO4, ?ltered and evaporated. Trituration with pentane followed by ?ltration and drying under vacuum yields ee-l. ee-l is suspended in a t, an enzyme is added.
In certain embodiments, the solvent is a polar aprotic solvent, 21 non-polar solvent or a mixtures of organic solvents with aqueous s. In certain embodiments, the polar aprotic solvent includes but is not d to diethyl ether, diisopropyl ether, methyl t—butyl ether, 2-methy1tetrahydrofuran, tetrahydrofuran, dichloromethane, and chloroform. In certain embodiments, non—polar solvents include but are not limited to hexane and heptane. In particular embodiments, the solvent is diisopropyl ether: phosphate buffer 1:2.
In certain embodiments, the enzyme is a lipase such as but are not limited to CAL—A, CAL-B, PPL, PSL-C, PSL, CRL, and MML. In particular embodiments, the enzyme is CAL-B.
In certain embodiments, the reaction is stirred at 0 to 60 °C, at 10 to 50 °C, at 20 to 40 °C, at about 30°C.
In certain embodiments, the reaction is stirred for 24 to 200h, 50 to 150h, about 100h.
In certain ments, the product cc-1a is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination f.
In certain embodiments, e-2 is removed by extraction with an aqueous layer.
In certain embodiments, the product e—2 is removed by extraction in a basic aqueous layer.
In particular embodiments, the reaction e is ?ltered and the layers of the ?ltrate are separated. The solid is washed with DCM and the ?ltrate is used to extract the s layer. The ed organic layers are washed with 5% NazCO3, brine and dried. Filtration and evaporation of the volatiles under reduced pressure affords cc—la.
In particular embodiments, the acyl donor is an anhydride, RX is (C1- C4)alkyl-Ry’ Ry is ed from the group consisting of H and COZH, the catalyst is 4— dimethylaminopyridine, the base for the ?rst step is pyridine, the solvent for the ?rst step is an aromatic t, the reaction mixture in the ?rst step is stirred at about 0 to about 60 °C, the solvent for the hydrolysis is diisopropyl ether: ate buffer 1:2, the enzyme is CAL-B, and hydrolysis reaction is stirred at about 0 to about 30°C.
In particular embodiments, the acyl donor is glutaric anhydride, Rx is —COZH, the catalyst is 4—dimethylaminopyridine, the base for the ?rst step is pyridine, the solvent for the ?rst step is pyridine, the reaction mixture in the ?rst step is stirred at about 60 0C, the solvent for the hydrolysis is ropyl ether: phosphate buffer 1:2, the enzyme is CAL—B, the hydrolysis reaction is stirred at about 30°C, and e— 2 is removed by extraction in a basic aqueous layer.
In certain embodiments, the enantiomeric excess (%ee) of the product is about 50 to 100, about 75 to 100, about 90 to 100, about 95 to 100, about 98 to 100, about 98.5 to 100, about 98.5 to 99, about 99 to 100, about 99.5 to 100, about 99.9 to T. cal resolution of c-la NHBOC NHBOC + — ‘_ 9 NHa FNHa and O D —. + H0 ,Q + 13 cc_’]b CC—1a (id-2 Cid-1 In certain embodiments, c-la is resolved via a classical resolution process.
In this process, c-la, an acid, and a solvent are combined.
In certain embodiments, the acid is selected from the group ting of: -single enantiomers of carboxylic acids including but not limited to: naproxen, phenyl succinic acid, malic acid, 2-phenylpropionic acid, alpha-methoxy- phenyl acetic acid, tartranilic acid, 3-phenyllactic acid, d-hydroxyisovaleric acid, 2’—methoxy-tartranilic acid, (alpha—methylbenzyl)phthalamic acid, 2’- chloro-tartranilic acid, pyroglutamic acid; -single omers of mandelic acid derivatives including but not limited to: mandelic acid, 2-chloromandelic acid, 4-bromo-mandelic acid, O-acetyl ic acid, 4-methyl-mandelic acid; e enantiomers of sulfonic acids including but not limited to: camphor sulfonic acid; -single enantiomers of tartaric acid derivatives including but not d to: tartaric acid, dibenzoyl ic acid hydrate, di-p-anisoyltartaric acid, di- toluyltartaric acid, dibenzoyl tartaric acid hydrate; -single enantiomers of phosphoric acid derivatives including but not limited to: phencyphos hydrate, chlocyphos, anisyphos, BINAP phosphate; and e enantiomers of amino acids including but not limited to: N—acetyl- phenylalanine, N—acetyl-leucine, yl-proline, boc-phenylalanine, and boc— homophenylalanine.
In some embodiments, the acid is (S)—Naproxen or S—(+)-mandelic acid. In particular embodiments, the acid is (S)-Naproxen. In particular embodiments, the acid is S-(+)-mandelic acid.
In certain embodiments, the solvent is water, acetonitrile, l, isopropanol, methyl ethyl ketone, pyl acetate, dioxane, a e of water and a water-miscible organic solvents such as ethanol and isopropanol, an halogenated solvent such as dichloromethane and chloroform. In particular embodiments, the t is water or isopropanol or a mixture thereof. In particular embodiments, the solvent is water. In particular embodiments, the solvent is isopropanol.
In certain embodiments, the reaction is stirred at 0 to 120 °C, 2 to 120°C, 50 to 120 °C, 80 to 120 °C about 100 0C. In certain embodiments, the reaction is stirred at about 20 °C.
In certain embodiments, the product is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination f.
In certain embodiments, dd-l precipitates out of solution and is ?ltered. The solid may be further recrystallized in a solvent such as isopropanol.
In particular embodiments, removal of the solvent by evaporation yields a mixture of dd—l and dd-2. The mixture is suspended in a solvent.
In certain embodiments, dd-l is selectively recrystallized.
In certain ments, the solvent is water, acetonitrile, ethanol, isopropanol, methyl ethyl ketone, pyl acetate, dioxane; a mixture of water and miscible c solvents such as ethanol and isopropanol, or a halogenated solvent such as dichloromethane or chloroform. In particular embodiments, the solvent is a mixture of methyl ethyl ketone and water.
In n embodiments, the e is stirred at about 0 to 100 °C, about 20 to 80 °C, about 40 to 60°C.
In certain embodiments, the mixture is allowed to cool to room temperature and the solid is isolated by ?ltration, dried and recrystallized from 10% water in methyl ethyl ketone to provide enantioenriched dd—l.
In particular embodiments, the acid is S—(+)-mandelic acid or (S)-Naproxen, the solvent is water or isopropanol, the reaction is stirred at about 0 to about 20°C, and dd—l the product is isolated by solvent extraction, chromatography, crystallization or a ation thereof.
In particular embodiments, the acid is S—(+)-mandelic acid, the solvent is isopropanol, the reaction is d at about 20°C, and dd—l precipitates out of solution.
In particular embodiments, the acid is the acid is (S)-Naproxen, the solvent is water, the reaction is stirred at about 20°C, and dd-l is selectively recrystallized in a mixture of methyl ethyl ketone and water.
In n embodiments, the enantiomeric excess (%ee) of the product is about 50 to 100, about 75 to 100, about 90 to 100, about 95 to 100, about 98 to 100, about 98.5 to 100, about 98.5 to 99, about 99 to 100, about 99.5 to 100, about 99.9 to U. Allylic Amination HO HO Dom —’ UNBOCZ f-1x 9-1X In certain embodiments, an allylic ion process for obtaining g-1x is provided. In this process, a ligand and a catalyst are mixed in degassed solvent, followed by addition of f—lx, a base and a nucleophile.
In certain embodiments, the ligand is absent, tricyclohexylphosphine, 1,3- bis(diphenylphosphino)propane; 1,2-bis(diphenylphosphino)ethane, triphenylphosphine or 1,1’-bis(diphenylphosphino)ferrocene. In particular embodiments, the ligand is nylphosphine.
In certain embodiments, the catalyst is a Palladium catalyst such as Pd(OAc)2, PdC12(PPh3), Pd(tBuzPh)2Clz, Tris(dibenzylideneacetone)dipalladium (0) and Pd(amphos)2Clz. In particular embodiments, the st is Tris(dibenzylideneacetone)dipalladium (0).
In certain embodiments, the solvent is an ether such as dimethoxyethane, THF or MeTHF, an aromatic solvent such as toluene and benzene. In particular embodiments, the solvent is THF.
In certain embodiments, the base is potassium isopropoxide, cesium hydroxide, Hunig’s base or a carbonate base such as cesium carbonate, potassium carbonate and sodium ate. In particular embodiments, the base is cesium carbonate.
In certain ments, the phile is a amide such as potassium phthalamide, an azide such as sodium azide or TMS—azide, an amine such as benzylamine or dibenzylamine, a carboxylate such as di-tert-butyl iminodicarboxylate.
In particular embodiments, the nucleophile is di-tert-butyl icarboxylate.
In certain embodiments, about 1 equivalent of nucleophile is added.
In certain embodiments, the reaction is stirred at about 20 to 80 °C, about 30 to 70 °C, about 40 to 60 °C, about 50 °C.
In certain embodiments, the mixture is heated to about 50 0C for approximately 18 h.
In certain embodiments, the product formed is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to t extraction, tography, crystallization or a combination thereof.
In certain embodiments, the mixture is cooled and water and ethyl acetate are added. The layers are separated and the organic phase is washed with ethyl acetate.
The combined organics are concentrated to dryness. The residue is d by silica gel column chromatography (0 to 40% ethyl acetate in hexane). The ed material is dissolved in MeTHF, washed with 5% aq. KOH, concentrated, and puri?ed by silica gel column chromatography (0 to 10% methanol in dichloromethane) to provide g-lx.
In particular embodiments, the ligand is triphenylphosphine, the catalyst is a palladium cataloyst, the solvent is an ether, the base is a carbonate base, the phile is t-butyl iminodicarboxylate, and the reaction is stirred at about 20 to about 80 In particular embodiments, the ligand is triphenylphosphine, the catalyst is Tris(dibenzylideneacetone)dipalladium (0), the solvent is THF, the base is cesium carbonate, the nucleophile is di-tert-butyl iminodicarboxylate, and the reaction is d at about 50 °C.
V. Hydrogenation H0 HO UNBOCZ —’ UNBOCZ 9-1X h-1x In certain embodiments, a hydrogenation process for ing h-1x is provided. In this process, g-lx and a catalyst are combined in a solvent, followed by addition of a source of hydrogen.
In certain embodiments, the catalyst is a platinum catalyst such as PtO2, a palladium catalyst, a nickel st such as Raney Nickel, a rhodium catalyst such as RhCl(PPh3)3, a ruthenium catalyst such as Nyori’s catalyst, or an iridium catalyst such as ee’s catalyst. In some embodiments, the catalyst is selected form the group consisting of Pd/C, PtO2, Raney Nickel, RhCl(PPh3)3, Nyori’s catalyst, and Crabtree’s catalyst. In particular embodiments, the catalyst is PtO2.
In certain embodiments, the solvent is a polar aprotic solvent such as THF, 2-MeTHF, dioxane, l ether, diisopropyl ether, DME, MTBE, CPME, EtOAc and DCM or a polar protic solvent such as methanol, isopropanol, ethanol, and n-butanol. In particular embodiments, the solvent is isopropanol.
In certain embodiments, the reaction is d at about 0 to 65 °C, about 5 to 55 °C about 10 to 45 °C about 10 to 35 °C or about 15 to 25 °C , , , In certain ments, the source of hydrogen is formic acid, hydrazine, dihydronapthalene, dihydroanthracene, H2 gas or Hantzch ester and isopropanol. In particular embodiments, the source of hydrogen is H2 gas. In particular ments, the source of en is an atmosphere of hydrogen.
In n embodiments, the reaction is stirred for 1 to 48h, 6 to 24h, 10 to 20h, 16 to 20h, or about 18h.
In certain embodiments, h-lx is extracted and optionally puri?ed by any suitable technique known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In certain embodiments, the mixture is ?ltered through celite and used without further puri?cation in the uent deprotection.
In particular embodiments, the catalyst is a platinum catalyst, the solvent is a polar protic solvent, the reaction is stirred at about 5 to 55 °C, and the source of hydrogen is H2 gas.
In particular embodiments, the catalyst is PtO2, the solvent is isopropanol, the on is stirred at about 15 to 25 °C, and the source of hydrogen is H2 gas.
W. Deprotection HO HO UNBOCZ_’ UNHZ N—1 x In certain embodiments, a deprotection process for obtaining N—lx is provided. In this process, h—lx is added to an acid in a solvent.
In certain ments, the acid is a sulfonic acid such as methanesulfonic acid, p-toluenesulfonic acid and camphorsulfonic acid, an inorganic acid such as oric acid, hloric acid and sulfuric acid, a carboxylic acid such as tri?uoroacetic acid, oxalic acid and benzoic acid. In particular embodiments, the acid is anhydrous hloric acid.
In certain embodiments, the solvent is an alcoholic solvent such as methanol, isopropanol and ethanol, or a polar aprotic solvent such as dioxane, acetonitrile and dichloromethane, or water. In certain embodiments, the t is an alcoholic solvent. In certain embodiments, the solvent is a polar aprotic solvent. In n embodiments, the solvent is water. In certain embodiments, the solvent is methanol, isopropanol, ethanol, dioxane, acetonitrile, dichloromethane, or water. In particular embodiments, the solvent is isopropanol.
In certain embodiments, the reaction is stirred at about 0 to 80 oC, about 0 to 60 °C, about 5 to 45 °C about 10 to 35 °C or about 15 to 25 °C.
, , In n embodiments, about 1 to 10 equivalents, about 5 to 10 equivalents, or about 7 equivalents of acid is used.
In certain embodiments, the reaction is stirred for about 1 to 48h, about 6 to 24h, about 12 to 24h, or about 18h.
In n embodiments, the product formed, N—1x, is extracted and optionally puri?ed by any suitable que known in the art, such as, but not limited to solvent extraction, chromatography, crystallization or a combination thereof.
In ular embodiments, the reaction is cooled to approximately 0 °C and the product N—1x is ted by ion.
In particular embodiments, the acid is an inorganic acid, the solvent is an alcoholic solvent, and the reaction is stirred at 5 to 45 °C.
In particular embodiments, the acid is anhydrous hydrochloric acid, the solvent is isopropanol, and the reaction is stirred at 15 to 25 OC.
EXAMPLES In order for this invention to be more fully understood, the following examples are set forth. These examples are for the e of illustrating embodiments, and are not to be construed as limiting the scope of this disclosure in any way. The reactants used in the examples below may be obtained either as described herein, or if not bed herein, are themselves either commercially available or may be ed from commercially available materials by methods known in the art.
In one embodiment, a multi-step synthetic method for preparing a compound of Formula I is provided, as set forth below. In certain embodiments, each of the dual steps of the Schemes set forth below is provided. Examples and any combination oftwo or more successive steps of the below Examples are provided.
A. Acylation and amidation ofMeldrum ’s acid toform C-Ia: O F o o 0H W tBuCOCI F F DMAP, Et3N | J-1a N o o + /o —» o o —. H X OH MeCN,50°C TFA,MeCN,50°C o F F 7< 0\ In a reaction , Meldrum’s acid (101 g, 1.0 lent) and 4— dimethylaminopyridine (1.8 g, 0.2 equivalents) were combined with acetonitrile (300 mL). The resulting solution was treated with methoxyacetic acid (6.2 mL, 1.2 equivalents). Triethylamine (19.4 mL, 2.0 equivalents) was added slowly to the resulting solution, followed by pivaloyl chloride (9.4 mL, 1.1 equivalents). The reaction was then heated to about 45 to about 50 oC and aged until consumption of Meldrum’s acid was deemed complete.
A separate reaction vessel was charged with acetonitrile (50 mL) and J—la (13.4 g, 1.2 equivalents). The resulting solution was treated with tri?uoroacetic acid (8.0 mL, 1.5 equivalents), and then this acidic solution was added to the acylation reaction in progress at about 45 to about 50 0C.
The reaction was allowed to age for at least 18 hours at about 45 to about 50 °C, after which time the t was removed under reduced re. The crude e was dissolved in ethyl acetate (150 mL), and the organic layer was washed with water. The combined aqueous layers were extracted with ethyl acetate. The combined organic layers were washed with saturated sodium bicarbonate on, and the combined bicarbonate washes were back extracted with ethyl acetate. The combined organic layers were dried over magnesium sulfate, ?ltered, and concentrated under reduced pressure. The resulting crude material was puri?ed twice via silica gel chromatography to yield C-la. 1H NMR (400 MHz, coon); 5 7.12 (br, 1H), 6.66 (app t, J: 8.1 Hz, 2H), 4.50 (app d, J= 5.7 Hz, 2H), 4.08 (s, 2H), 3.44 (s, 2H), 3.40 (s, 3H). 13c NMR (100 MHz, CDC13): 3 203.96, 164.90, 162.37 (ddd, J: 250.0, 15.7, 15.7 Hz), 161.71 (ddd, J = 250.3, 14.9, 10.9 Hz), 110.05 (ddd, J: 19.7, 19.7, 4.7 Hz), 100.42 (m), 77.58, 59.41, 45.71, 31.17 (t, J= 3.5 Hz). LCMS, Calculated: 275.23, Found: 275.97 (M).
B. Alkylation of C-1a toform E-Ia: O F OMe MezN O F "2N\/kOMe /O\[O\ O F N DMFDMA \ N N \ N 0 F F H H 2-MeTHF 0 F F o o F F \ 0\ (2- a1 D-1a E1- a A solution of C-la (248 mg, 1.0 equivalent) and 2-methy1tetrahydrofuran (1.3 mL) was d with N,N—dimethylformamide dimethylacetal (0.1 mL, 1.1 equivalent) and stirred at room temperature ght (~14 hours). The reaction was treated with aminoacetaldehyde dimethyl acetal (0.1 mL, 1.0 equivalents), and was allowed to age for about 2 hours, and then was quenched via the addition of 2 N HCl (1.5 mL).
The reaction was d via the addition of ethyl acetate, and phases were separated. The aqueous layer was extracted with ethyl acetate. The combined organic layers were washed with brine, dried over magnesium sulfate, ?ltered, and concentrated under reduced pressure. The crude residue was purified via silica gel chromatography to yield E-la. 1H NMR (400 MHz, CDC13): 610.85(s, 1H), 9.86 (s, 1H), 8.02 (d, J= 13.1 Hz, 1H), 6.65 (dd, J: 8.7, 7.7 Hz, 2H), 4.53 (d, J: 3.9 Hz, 2H), 4.40 (t, J: 5.1 Hz, 1H), 4.18 (s, 2H), 3.42 (s, 6H), 3.39 (m, 2H), 3.37 (s, 3H). 13C NMR (100 MHz, CDC13):5193.30, 169.15, 162.10 (ddd, J=248.9, 15.5, 15.5 Hz), 161.7 (ddd,J= 250.0, 14.9, 11.1 Hz), , 111.08 (dde= 19.9, 19.9, 4.7 Hz) 103.12,100.29(ddd, J: 28.1, 17.7, 2.3 Hz), 76.30, 58.83, 54.98, 53.53, 51.57, 29.89 (t, J: 3.3 Hz). LCMS, Calculated: 390.36, Found: 390.92 (M).
C. Cyclization ofE-Ia toform F-Ia: O O 0\ / \E \ o F N \ N O \ NaOMe MeOH / O F F 40 C O o\ E-1a F-1a E-la (0.2 g, 1.0 equivalent), dimethyl oxalate (0.1 g, 2.5 equivalents) and methanol (1.5 mL) were combined and cooled to about 0 to about 5 °C. Sodium methoxide (0.2 mL, 30% solution in methanol, 1.75 equivalents) was introduced to the reaction slowly while keeping the internal temperature of the reaction below about 10 °C throughout the addition. After the addition was completed the reaction was heated to about 40 to about 50 °C for at least 18 hours.
After this time had elapsed, the reaction was diluted with 2 N HCl (1.5 mL) and ethyl acetate (2 mL). The phases were separated, and the aqueous phase was extracted with ethyl acetate. The combined organic layers were washed with brine, dried over magnesium e, d, and solvent was removed under reduced pressure. The resulting crude oil was puri?ed via silica gel chromatography to afford F- 1H NMR (400 MHz, CDC13): 8 10.28 (t, J= 5.5 Hz, 1H), 8.38 (s, 1H), 6.66 — 6.53 (m, 2H), 4.58 (d, J= 5.6 Hz, 2H), 4.43 (t, J= 4.7 Hz, 1H), 4.00 (d, .1: 4.7 Hz, 2H), 3.92 (s, 3H), 3.88 (s, 3H), 3.32 (s, 6H). 13C NMR (100 MHz, CDC13): 8 173.08, 163.81, , 162.14 (ddd, J: 249.2, 15.6, 15.6 Hz), 161.72 (ddd, .1: 250.5, 15.0, .9 Hz), 149.37, 144.64, , 119.21, 110.53 (ddd, J= 19.8, 4.7, 4.7 Hz), 102.70, 100.22 (m), 60.68, 56.75, 55.61, 53.35, 30.64. LCMS, Calculated: 458.39, Found: 459.15 (M+H).
D. Alkylation and cyclization of C-1a toform F-Ia: 1. DMFDMA o F H2N\)O\Me o / \ O F N we 2 ' H - 2 M THFe 1 N \ n O F F O O \ / O F F \ 3 ' /°\ o o C-1a NaOMe, MeOH, 40 °C F-1a To a reaction vessel were added C-la (245 mg, 1.0 equivalent) and N,N— dimethylformamide dimethylacetal (0.5 mL, 4.3 lent). The reaction mixture was agitated for approximately 30 s. The reaction was then treated with 2—methyl tetrahydrofuran (2.0 mL) and aminoacetaldehyde dimethyl acetal (0.1 mL, 1.0 equivalent). The reaction was allowed to age for several hours and then solvent was removed under reduced pressure.
The resulting material was dissolved in methanol and dimethyl oxalate was added (0.3 g, 2.5 equivalents). The reaction mixture was cooled to about 0 to about 5 °C, and then sodium methoxide (0.4 mL, 30% solution in ol, 1.75 equivalents) was introduced to the reaction slowly. After the addition was completed the reaction was heated to about 40 to about 50 °C.
After this time had elapsed, the reaction was cooled to room temperature and ed via the addition of 2 N HCl (1.5 mL). The reaction was then diluted with ethyl acetate, and the ing phases were ted. The aqueous layer was extracted with ethyl acetate. The combined organic layers were dried over magnesium sulfate, ?ltered, and concentrated under reduced pressure. The crude residue was purified via silica gel chromatography to yield F-la. 1H NMR (400 MHz, CDC13): 5 10.28 (t, J: 5.5 Hz, 1H), 8.38 (s, 1H), 6.66 — 6.53 (m, 2H), 4.58 (d, J: 5.6 Hz, 2H), 4.43 (t, J: 4.7 Hz, 1H), 4.00 (d, J: 4.7 Hz, 2H), 3.92 (s, 3H), 3.88 (s, 3H), 3.32 (s, 6H). 13C NMR (100 MHz, : 8 173.08, 163.81, 162.17, 162.14 (ddd, J= 249.2, 15.6, 15.6 Hz), 161.72 (ddd, J: 250.5, 15.0, .9 Hz), 149.37, 144.64, 134.98, 119.21, 110.53 (ddd, J: 19.8, 4.7, 4.7 Hz), 102.70, 100.22 (m), 60.68, 56.75, 55.61, 53.35, 30.64. LCMS, Calculated: 458.39, Found: 459.15 (M+H).
E. Condensation ofF-Ia with N-Ia toform G-Ia: \E o F O F H 1. CH3503H. AcOH o N \ N CH3CN, 75 °c \1/\N \ N H N O \ 0 \ o F F F F F-1a N-1a 6'13 K2C03, MeCN, 75 °C To a reaction vessel were added F-la (202 mg, 1.0 equivalent) and acetonitrile (1.4 mL). The resulting solution was treated with glacial acetic acid (0.2 mL, 6.0 equivalents) and methane sulfonic acid (0.01 mL, 0.3 equivalents). The reaction was then heated to about 70 to about 75 °C.
After 3 hours, a solid mixture of N-la (0.128g, 1.5 lents) and potassium carbonate (0.2 g, 2.7 equivalents) was introduced to the reaction at about 70 to about 75 °C. After the addition was completed, the reaction was allowed to progress for at least about 1 hour.
After this time had elapsed, water (1.4 mL) and dichloromethane (1.4 mL) were introduced to the reaction. The phases were ted, and the aqueous layer was extracted with dichloromethane. The combined organic layers were dried over magnesium e, then were d and concentrated under reduced pressure. The resulting crude material was puri?ed via silica gel chromatography to obtain G-la. 1H NMR (400 MHz, : 8 10.23 (t, J= 5.5 Hz, 1H), 8.39 (s, 1H), 6.60 (t, J= 8.1 Hz, 2H), 5.29 (dd, J= 9.5, 3.7 Hz, 2H), 4.57 (d, J= 5.4 Hz, 3H), 4.33 (dd, .1: 12.8, 3.8 Hz, 1H), 4.02 — 3.87 (m, 1H), 3.94 (s, 3H), 2.06 — 1.88 (m, 4H), 1.78 (dd, J= 17.2, 7.5 Hz, 1H), 1.55 — 1.46 (m, 1H). 13C NMR (100 MHz, CDC13): 8 174.53, 163.75, 162.33 (dd, J= 249.4, 15.7, 15.7 Hz), 161.86 (ddd, J= 250.4, 14.9, 10.9 Hz), 154.18, 154.15, 142.44, 129.75, 118.88, 110.58 (ddd, J= 19.8, 4.7, 4.7 Hz), 100.42 (m), 77.64, 74.40, 61.23, 54.79, 51.13, 38.31, 30.73, 29.55, 28.04. LCMS, Calculated: 463.14, Found: 464.15 (M+H).
F. Deprotection 0f G-Ia toform a compound ofFormula Ia: 0 F o F H H O"? MBr \ 92 O \ N O mot—» wtF F \ o F F o o\ 0 OH G-1a Ia G-la (14 g) was suspended in acetonitrile (150 mL) and dichloromethane (150 mL). MgBrz (12 g) was added. The reaction was heated to 40 to 50 °C for approximately 10 min before being cooled to room temperature. The reaction was poured into 0.5M HCl (140 mL) and the layers separated. The organic layer was washed with water (70 mL), and the organic layer was then trated. The crude product was puri?ed by silica gel Chromatography (100% dichloromethane up to 6% ethanol/dichloromethane) to afford Ia.
G. ysis of F-Ia toform II-a: / \E \ O F / \E \ O F /O \ HO \ o F F OH o F F o o\ o o\ F-1a Ila| To a reaction vessel were added F-la (480 mg, 1.0 equiv.), methanol (5.8 mL) and water (2.4 mL). To the resulting homogeneous solution, lithium hydroxide monohydrate (88 mg, 2.0 ) is added. The resulting suspension was stirred at room temperature for about 17 hours.
Water (15 mL) and ethyl acetate were added, then 1N HCl was added dropwise until the pH was about 3. The layers were mixed and separated, the aqueous layer extracted with ethyl acetate (15 mL), and the combined organic layers dried over NagsO4. The organic layer was removed by evaporation. The aqueous layer was then brought to pH <2, and extracted twice with ethyl acetate (2 x 15 mL). The combined organic layers were dried over NaZSO4, mixed with the e from the previous extraction and the solvent was removed by evaporation. The residue was taken up in MTBE (2.4 mL), to form a slurry, which was ?ltered and washed with MTBE to provide 1002. 1H NMR (400 MHz, CDC13): 8 10.43 (t, J: 5.2 Hz, 1H), 9.65 (bs, 1H), 8.52 (s, 1H), 6.67 (t, .1: 8.0 Hz, 2H), 4.67 (d, J= 6.0 Hz, 2H), 4.58 (t, .1: 4.8 Hz, 1H), 4.16 (d, .1: 4.8 Hz, 1H), 3.91 (s, 3H), 3.37 (s, 6H). 13C NMR (100 MHz, CDC13): 5 173.04, , 162.10, , 145.28, 137.25, 118.66, 102.46, 100.35 (t, J: 30.7 Hz), 87.42, 61.30, 57.09, 55.55, 30.94.
H. Preparation ofBB-Iafrom B-Ia: I 0 PhCH3 ft O O + —> O 0 Et Et 115 0C OMO\ O O x BB-1a To a reaction vessel was added B-la (0.2 g, 1.0 equivalent) and 3-pentanone (1.0 mL, 10.0 lents). These compounds were then dissolved in toluene (1.0 mL) and heated to about 110 to about 115 oC. The reaction was maintained at this temperature for about 4 hours, after which time the reaction was cooled to room ature and solvent was removed. The resulting crude material was puri?ed over silica gel to afford BB-la. 1H NMR (400 MHz, CDC13): 8 5.46 (t, J = 1.1 Hz, 1H), 3.97 (d, J= 1.0 Hz, 2H), 3.42 (s, 3H), 1.99 (m, 4H), 0.98 (t, J= 7.5 Hz, 6H). 13C NMR (100 MHz, CDC13): 8 167.63, 160.94, 111.05, 93.04, 70.07, 59.27, 28.08, 7.40. LCMS, Calculated: 200.10, Found 200.79 (Mt). 1. Preparation ofC-1afrom BB-Ia: Et Et F o o OX0 N 18 OMO\ PhCH3,115°C K/O\HF BB-1a C48 To a reaction vessel was added BB-la (0.08 g, 1.0 lent) and N-la (0.08 g, 1.1 equivalents). These compounds were then dissolved in toluene (1.5 mL) and heated to about 115 °C. After about 1 h, the reaction was cooled and solvent was removed. The ing crude material was puri?ed via silica gel chromatography to obtain C-la.
All spectral data collected for C-la matched that provided above.
J. Formation of3-1aOJ-Ia salt: OH HZN/? F F 0H F o o J-1a I 0 0 0 0 0 —> HzN/? x °><° F F B-1a B-1a O J-1a The free acid of B-la (4.4 g) was dissolved in 50 mL acetonitrile and J-la (3.3 g, 1.0 equivalent) in 30 mL acetonitrile was added. The desired salt was obtained and was aged for about one hour at room temperature. The solids were filtered and the cake was rinsed with 2 x 10 mL acetonitrile to afford the product. 1H NMR (400 MHz, 6) a 7.40 (bs, 3H), 6.11 (t, J= 7.7 Hz, 2H), 3.12 (s, 2H), 2.92 (s, 2H), 2.08 (s, 3H), 0.35 (s, 6H). 13C NMR (101 MHz, DMSO-dg) 8 191.98, 164.66, 163.06 (dt, J= 248.6, 16.2 Hz), 161.82 (ddd, J= 250.4, 15.8, 10.4 Hz), 107.39 (td, J: 20.0, 4.7 Hz), 101.16 (m), 100.01, 87.01, 77.71, 58.39, 30.45, 26.37.
K. Formation 0fB-IaoJ-Ia salt: Meldrum’s acid (10.1 g, 1.1 equivalents) and DMAP (0.6 g, 0.08 equivalents) were dissolved in 300 mL acetonitrile. Methoxyacetic acid (5.8 g, 1 equivalents) and 17.6 g (2.1 equivalents) Hunig’s base were added. The solution was warmed to about 45 °C and 8.4 g (1.1 equivalents) of pivaloyl chloride in 30 mL of itrile was added over about 1 hour.
After about 2.5 hours at about 45 °C, the on was cooled to room temperature and was concentrated under vacuum. The resulting oil was dissolved in 110 mL dichloromethane, cooled over ice bath, and extracted with 50 mL 1N HCl. The layers were ted, and the aqueous layer was extracted with 40 mL dichloromethane. The combined organic layer was concentrated and diluted in acetonitrile and evaporated again. The material was dissolved in 220 mL acetonitrile.
After cooling over an ice bath, tri?uorobenzylamine (11.4 g, 1.1 lents) and the mixture at about 9 °C was allowed to warm up to room temperature and agitated as the slurry thickened. After about 2 hours, 220 mL MTBE was added slowly and the slurry was aged overnight. The slurry was cooled over ice bath for about 3 hours and was ?ltered, rinsed with 50 mL cold 1:1 acetonitrile/MTBE, and dried overnight in a vacuum oven to afford the product.
L. Amidation using the B-IaoJ-Ia salt toform C-Ia o F H F TFA M o o c HzN/? _" o F F F F o\ V C-1a B-1a 9 J-1a The salt B-1a°J—1a (3.7g, 1.0 equivalent) was ded in 50 mL of acetonitrile, and then was treated with tri?uoroacetic acid (0.1 mL, 0.1 equivalent). The reaction was heated to about 40 to about 50 °C for approximately 18 hours, and then cooled to room ature. Solvent was removed under reduced pressure, and the resulting residue was suspended in 5 s of 2-methyl tetrahydrofuran and 5 volumes of hexanes were added dropwise over 1 h. The resulting mixture was allowed to stir for at least 24 hours, and then the resulting slurry was filtered to afford the product.
M. Amidation ofB-IaJ-Ia to C-Ia: 0 F l H2N o o F F TFA,MeCN H o 0 X 60°C 0 F F H3C CH3 0CH3 -la (75.077 g, 198.97 mmol, 1.0 equivalent), acetonitrile (750 mL), and tri?uoroacetic acid (1.5 mL, 20 mmol, 0.1 equiv) were combined in a reactor. The reactor was heated until the internal temperature reached about 58 °C, and the r ts were aged between about 58 — 61 °C for about 3.5 hours. The jacket temperature was then adjusted to about 45 °C and vacuum was applied. The reactor contents were distilled until about 150 mL remained. iso-Propylacetate (3 00 mL) was then charged to the reactor, and distillation was continued until the volume reached about 150 mL. iso-Propylacetate (150 mL) was then charged to the reactor, the jacket temperature was adjusted to about 20 °C, and contents were allowed to reach an al ature of < 25 °C. A wash on (22.8% NaCl, 1.5% HZSO4, 75.7% water, 300 mL) was charged to the reactor, and the contents were agitated for about 30 minutes.
The bottom phase was separated, and a second wash solution (22.8% NaCl, 1.5% H2SO4, 75.7% water, 300 mL) was charged to the reactor. After agitating for about 15 minutes, the bottom phase was separated, and 20% aqueous NaCl (3 00 mL) was charged to the reactor and agitated for about 15 minutes. The bottom phase was separated. Heptane (150 mL) was charged to the reactor, followed by seed (51 mg, 0.1 wt%). The mixture was aged for about 30 minutes, during which a slurry formed.
Additional heptane (450 mL) was then charged over no less than 30 minutes. The jacket ature was then adjusted to about 29 °C, and solvent was distilled under vacuum until the reactor contents reached a volume of about 450 mL. The slurry was then cooled to an internal temperature of about 5 °C over no less than 1 hour. The reactor contents were discharged and solids were collected by ion. The mother liquors were recycled twice in order to displace solids from the reactor, each time allowing the internal temperature to reach about <6 °C before discharging. A solution of heptane/iso— acetate (75% v/v, 225 mL) was then charged to the reactor, and when the internal temperature reached < 6 °C, the slurry was rinsed forward through the ?lter cake. The wet cake was then dried under vacuum at about 40 °C for about 18 hours, providing C- 1H NMR (400 MHz, CDC13): 5 7.12 (br, 1H), 6.66 (app t, J: 8.1 Hz, 2H), 4.50 (app (1, J= 5.7 Hz, 2H), 4.08 (s, 2H), 3.44 (s, 2H), 3.40 (s, 3H). 13C NMR (100 MHz, CDC13): 8 203.96, 164.90, 162.37 (ddd, J=250.0, 15.7, 15.7 Hz), 161.71 (ddd, J = 250.3, 14.9, 10.9 Hz), 110.05 (ddd, J= 19.7, 19.7, 4.7 Hz), 100.42 (111), 77.58, 59.41, 45.71, 31.17 (t, J= 3.5 Hz). LCMS, Calculated: 275.23, Found: 275.97 (M).
N. eformation ofD-Iafrom C-Ia o F H DMFDMA o F F O\ 2-MeTHF TFA C-la (8.4 g, 1.0 equiv) was charged to a reactor, followed by the addition of 2—methy1tetrahydrofuran (166.7 mL, 20 volumes, 0.18 M) and tri?uoroacetic acid (231.9 uL, 0.1 equiv). The reaction mixture was heated to an internal temperature of about 40 oC, and DMF—DMA (3.0 mL, 0.75 equiv) was quickly added. The reaction mixture is agitated for a few minutes, followed by the addition of D-la seeds (20 mgs, 0.002 equivalent) at about 40 OC. The genous mixture was aged at 40 °C for about one hour. An onal portion of DMF-DMA was added (1.5 mL, 0.37 equivalent), and the reaction mixture was agitated for about 25 s. One final portion of DMF-DMA (1.5 mL, 0.37 equiv) was added, and the reaction mixture was cooled from about 40 °C to room temperature and allowed to agitate overnight. [05 55] The contents of the reactor were ?ltered, and the ?lter cake was rinsed with a solvent combination of 2—methy1tetrahydrofuran and heptanes (67.1 mL, 8 volumes) to provide D-la. 1H NMR (400 MHz, CDC13): 6 8.34 (br, 1H), 7.83 (s, 1H), 6.63 (m, 2H), 4.53 (s, 2H), 4.12 (s, 2H), 3.34 (s, 3H), 3.10 (s, 6H). 13C NMR (100 MHz, CDC13): 6 192.33, 165.85, 163.03, , 158.00, 110.89, 103.50, 100.05, 76.11, 58.77, 44.74, 30.61. LCMS, Calculated: 330.12, Found: 330.91 (M).
O. Condensation and cyclization ofD-Ia toform F-Ia via E—Ia /0 o o / \ \OJVNH? \E O F N \ N O \ MeOH NaOMe MeOH / O F F 45°C 0 0\ D-la (70.0 g, 212 mmol, 1.0 equivalent) was charged to an inerted 1 L reactor. To this reactor was then charged methanol (420 mL, 6 volumes) and aminoacetaldehyde dimethylacetal (I, 28.8 mL, 233 mmol, 1.1 equivalent). The reactor jacket temperature was maintained between about 16 and 23 °C.
After aging the reaction for about 1 — 2 hours, dimethyl e (2, 125 g, 1.06 mol, 5.0 equivalents) was charged to the reactor and the r jacket temperature was increased to between about 42 — 48 °C. Upon achieving complete ution of dimethyl oxalate, the reactor was charged with sodium ide as a solution in methanol (84.7 g, 25 wt%, 197 mmol, 1.85 equivalents). The reactor jacket temperature was maintained between about 42 — 48 °C for about 14 — 18 h.
Reactor jacket temperature was reduced to about 34 — 37 °C over the course of about 1 h. Upon reaching a stable temperature in this range, the reactor was charged with F-la seed crystals (0.350 g, ca. 0.5 wt%) and d to age for about 1 — 2 h. At this point, water (420 mL, 6 volumes) was charged to the reactor over the course of about 2 — 3 hours. The reactor jacket temperature was reduced to about 18 — 22 °C over about 1 h.
The resulting slurry was discharged from the reactor, and the solids collected by ion. Liquors were ed to displace solids remaining in the reactor. The ted solids on the ?lter were then washed with a 1:1 mixture of water and ol (420 mL, 6 s), ed by water (420 mL, 6 V). The collected wet cake was dried in a vacuum oven at about 36 — 42 0C for about 16 h, providing F-la. 1H NMR (400 MHz, CD013): a 10.28 (t, J= 5.5 Hz, 1H), 8.38 (s, 1H), 6.66 — 6.53 (m, 2H), 4.58 (d, J= 5.6 Hz, 2H), 4.43 (t, J= 4.7 Hz, 1H), 4.00 (d, J: 4.7 Hz, 2H), 3.92 (s, 3H), 3.88 (s, 3H), 3.32 (s, 6H). 13C NMR (100 MHz, CDC13): 8 173.08, 163.81, 162.17, 162.14 (ddd, J= 249.2, 15.6, 15.6 Hz), 161.72 (ddd, J= 250.5, 15.0, .9 Hz), 149.37, 144.64, 134.98, 119.21, 110.53 (ddd, J: 19.8, 4.7, 4.7 Hz), 102.70, 100.22 (m), 60.68, 56.75, 55.61, 53.35, 30.64. LCMS, Calculated: 458.39, Found: 459.15 (M+H).
P. Acetal hydrolysis ofF-Ia toform FF-1a: / TN \ "m\ O F O F TsOH.H20, AcOH \[N \ Hm /O \ MeCN, 75 °C \ O F F /0 O F F (90% yield) O O\ 0 O\ F 1a FF-1 a To a solution of F-la (10.0 g, 1.0 lent) and acetonitrile (50 mL) was —Toluenesulfonic acid monohydrate (0.414 g, 0.10 equivalent) and acetic acid (16.3 mL, 12 equivalent). The reaction was then heated to about 75 °C and aged for about 8—10 hours. Once the reaction completion was con?rmed by HPLC, the reaction was cooled to room temperature and water (60 mL) was added. The mixture was then concentrated under reduced pressure to remove acetonitrile. The resultant slurry was then aged at room temperature for about 2 hours, ?ltered, washed with water (2 X 30 mL). The cake was dried in vacuum oven at about 50 °C for about 10 hours to give FF- 1H NMR (400 MHz, DMSO-d6): 0 10.34 (t, J: 8.0 Hz, 1H), 8.45 (s, 1H), 7.19 (m, 2H), 6.37 (m, 2H), 4.96 (m, 1H), 4.55 (d, .1: 4.0 Hz, 2H), 3.95 (m, 2H), 3.93 (s, 3H). 3.79 (s, 3H). 13C NMR (100 MHz, DMSO-d6): 5 172.32, 163.47, 162.10, 161.93 (dt, J: 246, 15.0 Hz), 161.41 (ddd, J: 247, 15.0, 11.0 Hz), 148.01, 145.57, 135.84, 118.32, 111.48 (td, .1= 20.0, 5.0 Hz), 101.17 (m), 87.99, 60.55, 60.50, 53.98, .37. LCMS, Calculated: 431.1061, Found: 431.1062 (M+H).
Q. Cyclization of FF-la and N-la.BzOH to form G-la HOTOH o F O F N \ N o H HO NH2 KOAc \f/\N \ N /O \ + —> H O F F ' BzOH DCM N \ O F F o o \ N-1a O O\ FF-1a FF-la (90.0 g, 1.0 equiv), N—la.BzOH (60.7 g, 1.3 equiv), and potassium acetate (51.3 g, 2.5 equiv) were charged to a reactor. Dichloromethane (DCM, 1.1L) was d and the mixture was agitated at about 20 °C until the reaction is complete.
A 5% aqueous NaHC03 solution (540 mL) was charged to the reactor and the mixture was agitated until the solids completely dissolve. The phases were separated and the bottom c phase was charged back to the reactor. Water (450 mL) was charged to the reactor and the mixture was agitated for about 15 minutes. The phases were ted and the organic phase was distilled to dryness.
The crude G—la was dissolved in dimethylformamide (DMF, 180 mL) and the resulting solution was d to a reactor containing water (1.1L) over about 2 hours, while agitating the water. The t slurry was aged at about 20 °C for about 12 hours and then ?ltered. The t cake was washed with water (360 mL) and dried to afford G—la. 1H NMR (400 MHz, CDC13): 5 10.23 (t, J= 5.5 Hz, 1H), 8.39 (s, 1H), 6.60 (t, J= 8.1 Hz, 2H), 5.29 (dd, J= 9.5, 3.7 Hz, 2H), 4.57 (d, J= 5.4 Hz, 3H), 4.33 (dd, J= 12.8, 3.8 Hz, 1H), 4.02 — 3.87 (m, 1H), 3.94 (s, 3H), 2.06 — 1.88 (m, 4H), 1.78 (dd, .1: 17.2, 7.5 Hz, 1H), 1.55 — 1.46 (m, 1H). 13C NMR (100 MHz, CDC13): 6 174.53, 163.75, 162.33 (dd, J= 249.4, 15.7, 15.7 Hz), 161.86 (ddd, J= 250.4, 14.9, 10.9 Hz), 154.18, 154.15, 142.44, 129.75, 118.88, 110.58 (ddd, J= 19.8, 4.7, 4.7 Hz), 100.42 (m), 77.64, 74.40, 61.23, 54.79, 51.13, 38.31, 30.73, 29.55, 28.04. LCMS, Calculated: 463.14, Found: 464.15 (M+H).
R. Conversion of (-)-Vince lactam to b-la Pd/C, H NHBoc 2, 2—MeTHF; NH N30 MeMgBr B0C20, DMAP O 0 (-)-Vince lactam a-1a b-1 a Wet Pd/C (0.138 kg) was charged to a r followed by 2—MeTHF (421 kg) and (—)-Vince lactam (55 kg). The vessel was purged with nitrogen followed by hydrogen. The contents were adjusted to about 25 to 35 °C and the hydrogen maintained at about 0.30 to 0.35 MPa. After about 6.5 h, the reaction was deemed te by HPLC. The contents were ?ltered h celite (11 kg) and washed with 2-MeTHF (102 kg). The t was obtained in solution.
A solution of BoczO in 2—MeTHF was prepared as follows: Boc20 (123 kg) was charged to a reactor followed by 2-MeTHF (60 kg). After a solution was achieved, it was discharged into a container and rinsed forward with F (44.6 kg) and held until further use.
The solution of the product of the enation was charged to a reactor and concentrated under reduced pressure to about 5 to 6 V at :45 °C. DMAP (0.34 kg) was charged and the mixture warmed to about 45 to 50 °C. The solution of BoczO was added over approximately 2 h and the mixture allowed to stir for an additional 2 h at the target temperature. After this time, the reaction was deemed complete by HPLC. 2— MeTHF was charged (480 kg) and the solution trated under reduced pressure to about 4 to 5 V at about :45 °C. This process was repeated twice more to remove t— BuOH. 2-MeTHF was charged (278.8 kg) to afford a-la in solution.
The solution of a—la was diluted with 2—MeTHF (405.8 kg) and cooled to — to 0 °C. MeMgBr (35% in 2-MeTHF, 201.3 kg) was added over approximately 6h to maintain the temperature at about -10 to 0 0C. After the addition was complete, the e was stirred for an additional approximately 1 to 2 h at which time the reaction was complete as determined by HPLC. 15% aqueous AcOH (350 kg) was added ining the temperature at about 0 to 5 0C to adjust the pH to approximately 7. The layers were separated and the organic layer was washed with water twice (726 kg total water used). The organic layer was concentrated to about 4 to 5 V under reduced pressure at about :45 °C. The solution was azeotroped with 2-MeTHF three times to about 4 to 5 V each time (2810 kg 2-MeTHF used). The ?nal solution was concentrated under reduced pressure to about 2.5 to 3 V. n—Heptane (126 kg) was slowly added ining the temperature at 30 to 35 °C. b—la seeds were added (0.7 kg) and the mixture stirred at about 30 to 35 °C for 5 to 10 h. Additional ane was added (200.4 kg) maintaining the temperature at about 30 to 35 °C over approximately h. The contents were distilled under reduced pressure at about 5 45 °C to about 6 to 7 V. Additional n-heptane was added (243.2 kg) maintaining the temperature at about 30 to 35 °C over approximately 1 to 2 h. The contents were distilled under reduced pressure at about 5 45 °C to about 6 to 7 V. Additional n—heptane was added (241.4 kg) maintaining the temperature at about 30 to 35 °C over approximately 1 to 2 h. The contents were distilled under reduced pressure at about 5 45 °C to about 6 to 7 V. onal n-heptane was added (253.6 kg) maintaining the temperature at about 30 to °C over approximately 1 to 2 h. The contents were cooled to about -5 to 0 oC and held for approximately 1 to 2 h. Product was collected by ?ltration, washed with n- heptane (187 kg) at about -5 to 0 °C, and dried under reduced re at about 40 to 45 °C to afford single enantiomer b-la.
S. sion ofb-la t0 cc-Ia NHBOC NHBoc b-1a cc-1a b-la (90.9 kg) and toluene (822 kg) were charged to a reactor and stirred at to 30 °C to e a solution. m-CPBA (174 kg) was charged into the reactor in 5 portions (4 to 6 h between additions). The reaction was allowed to stir at about 25 to 30 °C until the reaction was deemed complete by HPLC (approximately 10 to 20 h). 20% NaHS03 (428 kg) was added maintaining the temperature about below 30 °C and the mixture stirred until negative with starch potassium iodide paper. 10% NaOH (698 kg) was added ining the temperature about below 30 °C. The mixture was stirred for approximately 30 to 60 min. The organic layer was washed with water (500 kg) and the organic layer concentrated under d re at about 5 45 °C to 5 to 6 V. The temperature was adjusted to 15 to 25 0C to afford the oxidized product in solution.
Water (90 kg), methanol (70 kg), and LiOH-HZO (29.5 kg) were added to the solution of the ed product and the mixture stirred at 25 to 30°C for 3 to 6 h at which time the reaction was deemed complete by HPLC. Toluene (390 kg) and 25% NaCl (278 kg) were added to the mixture and stirred for about 30 to 60 min. The layers were separated and 20% NaCl (259 kg) were added to the organic layer. The pH of the solution was adjusted to about 7 to 8 with 1 N HCl (7.6 kg) and the layers separated.
The organic layer was washed with 20% NaCl (259.4 kg). The organic layer was ?ltered and concentrated under reduced pressure at about 5 45 °C to about 4.5 to 5.5 V.
Toluene (385.6 kg) was charged and the distillation/toluene addition were repeated until KF S 0.05%. Toluene (3 85.3 kg) was charged followed by active carbon (6.5 kg). The mixture was warmed to about 30 to 40 °C and stirred for about 2 to 6 h. The contents were cooled, ?ltered through celite (6.3 kg), and washed with toluene (146 kg). The e was concentrated under reduced pressure at about 5 45 °C to about 1.5 to 1.6 V.
The e was stirred for about 30 to 60 min at about 30 to 35 °C. n—Heptane (87 kg) was charged over about 1 to 2 h and the mixture seeded with cc-la (0.516 kg) and stirred for an additional 2 to 3 h. ane (286.4 kg) was slowly charged and stirred for about 2 to 3 h. The mixture was cooled to about 10 to 15 OC and stirred for an additional about 3 to 5 h. The product was collected by ?ltration and washed with n— heptane (40 kg) at about 10 to 15 OC. The product was dried under reduced pressure at about 35 to 45 °C to afford single omer cc-la.
T. Classical resolution of c-la NHBOC NHBoc + — ltlH O S 9NH3 3 S-Naproxen S oxen HO" + H0 HO\\‘© + H0 cc—1b cc—1a dd—2a (id—1a c—1a(+/-); racemic mixture of 00-1 b and co1a A vessel was charged with c—la (10.0g, 1 equivalent), (S)—Naproxen (1 1.5 g 1.03 mmol) and water (200 mL). The mixture was re?uxed ght, after which the mixture had turned dark. Removal of the solvent by rotary evaporation yielded the desired salt as a brown solid. The mixture of dd—2a and dd-la (3.0 g) was suspended in MEK (50 mL) and the mixture was heated to re?ux. Water was added (4 mL). The mixture was allowed to cool to room temperature. The solid was isolated by ?ltration, dried and recrystallized from 10% water in MEK (30 mL) to afford dd-la which showed an optical purity >90%ee.
U. Classical resolution ofc-Ia ¢NHBoc NHBoc itiH ' if""3 .
Q (d 3 15 S—mandelic acud- 9 S-mandelic acid H0 .Q + HO cc-1b 00-15 dd-2b dd_1 b 0-13 (+/—): racemic mixture of 00-1 b and cc—ia To a solution of c—la (89.7 mgs, 1.0 equiv) in IPA (0.9 mL) was quickly added a solution of S—(+)—mandelic acid (134.9 mgs, 1.0 equiv) in IPA (0.9 mL). The e was stirred at approximately room temperature and solid precipitate was observed after approximately 20 minutes. The slurry was stirred for an additional 15 s, and the solids were ?ltered and collected. The solids obtained from the initial salt formation were recrystallized in IPA and was slowly cooled from approximately 80 °C to approximately 0 °C to e the enantioenriched t dd—lb.
V. Enzymatic resolution ofc-Ia — Selective Acylation ‘NHBoc NHBoc NHBoc NHBoc o’ g 0‘ 0 13 . . HOW HO" + H0 _. H0" 0 00-1 b cc-1a 6‘1 a cc-1b c—ia (+/-): racemic mixture of cc-1b and 00-131 NHBoc 66-131 Toluene (500 mL) was added to a reaction vessel followed by c—la (50 g, 1 eq.). Glutaric anhydride (28.4 g, 1 eq.) was added followed by Novozyme 435 (7.5 g, wt%). The reaction was allowed to stir for approximately 23 h at approximately 10 to 15 °C. onal Novozyme (2.5 g, 5 wt%) was charged and the reaction allowed to d for imately 12 h at approximately 10 to 15 °C. Solids were removed by ?ltration and rinsed with toluene (100 mL). The organic phase was washed with 10% NaZCO3 (250 mL) followed by 5% NazCO3 (250 mL). The combined aqueous phases were washed with MTBE (2 x 500 mL). THF (150 mL) was added to the resulting aqueous phase followed by sodium ide (14.9 g, 3 equivalents). The mixture was allowed to stir for approximately 4 h at approximately 15 to 20 °C. The layers were separated, and the THF layer was concentrated. The s layer was extracted with dichloromethane (2 x 250 mL). The residue from the THF layer was dissolved in the combined dichloromethane, and the mixture washed with water (250 mL). The organic phase was concentrated to approximately 100 mL and water (300 mL) was added. The mixture was r concentrated to approximately 250 mL at approximately 55 to 60 °C. The mixture was cooled to approximately 47 °C over approximately 1 h, seeds of the product (200 mg) were added and the mixture aged for approximately 1 h at approximately 45 to 47 °C. The mixture was cooled to approximately 25 °C over approximately 2 h and aged approximately 0.5 h. The solids were collected by ?ltration and washed with water (50 mL). The product was dried at approximately 35 to 40 °C under vacuum to afford the desired product cc—la (>95%ee).
W. Enzymatic tion ofc-Ia — Selective Hydrolysis éNHBOC NHBoc O yNHBoc NHBoc Hog HOW .0O HOWO HOW ,dO + —> o‘ + O cc»1b 001 a 6‘1 a (+/-) ee—1a: race-mic e of e-1a and e-2a 01a (+/—): racemic mixture of cc-1b and cc—1a J CAL-B NHBoc WWWO + mg A e of compound c-la (50 g, 1 eq.), glutaric anhydride (42.5 g, 1.5 eq.) and DMAP (50 mg, 0.001 eq.) in 300 mL pyridine was stirred overnight at approximately 60 °C. The reaction mixture was evaporated to s. uently the residue was dissolved in DCM (250 mL) and washed with 3 x 250 mL 0.2 M HCl (aq.). The organic layer was evaporated to dryness. The residue was stirred with 300 mL water and the pH was adjusted to 7.8 with approximately 300 mL 2 M NaOH solution. The water layer was washed with DCM (3 x 70 mL). The water layer was then acidi?ed to pH 4 with 3 N HCl (aq) and extracted with DCM (4 x 150 mL and 2 x 100 mL). The combined organic layers were dried over Na2804, ?ltered and evaporated, yielding a colorless oil which crystalized upon standing. Trituration with pentane (~100 mL) followed by ?ltration and drying under vacuum yielded racemic ee—la. c ee—la (1.008 g) was suspended in diisopropyl ether (10 mL). To the suspension was added 200 mM sodium phosphate buffer pH 7 (20 mL) and Cal—B (0.2 g). The reaction mixture was shaken at 250 rpm, 30 0C for ~100 h (>80%ee observed after 91.5 h). The reaction mixture was ?ltered and the layers of the ?ltrate were separated. The solid was washed with DCM (2 x 10 mL). The ?ltrate was used to extract the aqueous layer. The aqueous layer was extracted a second time with DCM (10 mL). The combined organic layers were washed with 5% NagCO3 (2 x 20 mL), brine (10 mL) and dried over NaZSO4. Filtration and evaporation of the volatiles under reduced pressure ed the desired product cc—la.
X. Allylic Amination off-1a toform g-la HO HO D‘OAC ' UNBOCZ Triphenylphosphine (0.37 g, 0.02 eq) and Pd2(dba)3 (0.32 g, 0.005 eq) were mixed in degassed THF (200 mL) at approximately room temperature for approximately 20 min. f-la (10 g, 1 eq, single enantiomer), CsZCO3 (46 g, 2 eq) and di— tert-butyl iminodicarboxylate (16.05 g, 1.05 eq) were added and the mixture heated to 50 °C for imately 18 h. The mixture was cooled and water (100 mL) and ethyl acetate (50 mL) were added. The layers were separated and the c phase was washed 2 x ethyl e. The combined cs were dried over sodium sulfate and concentrated to dryness. The residue was puri?ed by silica gel column chromatography (0 to 40% ethyl acetate in hexane). The isolated al was dissolved in MeTHF, washed with 5% aq. KOH, concentrated, and puri?ed by silica gel column chromatography (0 to 10% methanol in dichloromethane) to e the desired product g-la.
Y. enation ofg-Ia toform h-Ia HO HO UNBOCz ' \O—NBocz g—la (1.0 g) and PtOz (0.008 g) were combined in isopropanol (10 mL). The vessel was ?ushed with H2 gas and stirred under an atmosphere of hydrogen at approximately room temperature for approximately 18 h. The mixture was ?ltered through celite and used t further puri?cation in the subsequent deprotection.
Z. Deprotection ofh-Ia toform N-Ia HO HO \O‘NBOCZ —’ UNHZ h-1a N-1a Acetyl chloride (1.7 mL, 7 eq) was combined with isopropanol (5 mL) and stirred at approximately room ature for approximately 15 min to generate HCl in isopropanol. Crude starting material h-la in isopropanol (2.5 mL) was added and rinsed forward with isopropanol (2.5 mL). After approximately 18 h, the slurry was cooled to approximately 0 °C and N—la was ted by ?ltration. 1H NMR (CD3OD) con?rmed the desired product was isolated.
Each of the nces including all patents, patent applications and publications cited in the present application is incorporated herein by reference in its entirety, as if each of them is individually incorporated. Further, it would be appreciated that, in the above ng of invention, the skilled in the art could make n changes or modi?cations to the invention, and these equivalents would still be within the scope of the disclosure de?ned by the appended claims of the application.

Claims (35)

1. A s to prepare a compound of Formula I: according to the following General Scheme VI wherein the process comprises the following steps: reacting B-1.J-1 in the presence of an acid to yield C-1; ng C-1 with an alkylated formamide acetal to yield D-1; reacting D-1 with K-1 to yield E-1; reacting E-1 with M-1 in the presence of a base to yield F-1; reacting F-1 with at least one acid to yield FF-1; reacting FF-1 with N-1, or salts or co-crystals thereof, in the presence of an additive to yield G-1; reacting G-1 under conditions suitable to yield a compound of Formula I; wherein Hal is halogen, which may be the same or different, n is 1, 2, or 3, L is -C(Rc)2-, -C(Rc)2C(Rc)2-, -C(Rc)2C(Rc)2C(Rc)2-, or -C(Rc)2C(Rc)2C(Rc)2C(Rc)2-, each Rc is, independently, hydrogen, halo, hydroxyl or C1-C4alkyl, each Ra, R1, and R2 is, independently, (C1-C4)alkyl, (C6-C10)aryl, or (C6-C10)aryl (C1-C4)alkyl; each Rb is ndently (C1-C4)alkyl.
2. The process of claim 1 wherein B-1.J-1 is reacted in an acid selected from the group ting of an inorganic acid, an c acid, a halogenated organic acid, a Lewis acid and mixtures thereof.
3. The s of claim 2 wherein the acid is ed from the group consisting of hydrochloric acid, hydrobromic acid, hydroiodic acid, trifluoromethanesulfonic acid, formic acid, trifluoroacetic acid, trichloroacetic acid, perfluoropropionic acid, dichloroacetic acid, chloroacetic acid, acetic acid, para-toluenesulfonic acid, e sulfonic acid, zinc chloride, magnesium bromide, magnesium triflate, copper triflate, scandium triflate, and a mixture thereof.
4. The process of claim 2 or 3 wherein the acid is trifluoroacetic acid.
5. The process of any one of claims 1 to 4 wherein the alkylated formamide acetal is ed from the group consisting of N,N-dimethylformamide dimethyl acetal, N,N- dimethylformamide diethyl acetal, N,N-dimethylformamide diisopropyl acetal, N,N- lformamide dimethyl acetal, and isopropylformamide dimethyl acetal.
6. The process of any one of claims 1 to 5 n the alkylated formamide acetal is N,N-dimethylformamide dimethyl acetal.
7. The process of any one of claims 1 to 6 n C-1 is reacted with an alkylated formamide acetal in the presence of an acid selected from the group consisting of trifluoroacetic acid, formic acid, acetic acid, ic acid trifluoroacetic acid, trichloroacetic acid, and perfluoropropionic acid.
8. The process of claim 7, wherein the acid is trifluoroacetic acid.
9. The process of any one of claims 1 to 8 wherein K-1 is selected from the group consisting of aminoacetaldehyde diethylacetal, aminoacetaldehyde dipropylacetal, aminoacetaldehyde dimethylacetal, and aminoacetaldehyde lacetal.
10. The process of any one of claims 1 to 9 wherein K-1 is aminoacetaldehyde dimethylacetal.
11. The process of any one of claims 1 to 10 wherein M-1 is selected from the group consisting of dimethyl oxalate, diethyl oxalate, dipropyl oxalate, and dibutyl oxalate.
12. The process of any one of claims 1 to 11 wherein M-1 is dimethyl oxalate.
13. The process of any one of claims 1 to 12 wherein E-1 is reacted with M-1 in the presence of a base selected from the group consisting of a metal hydride, an de, an inorganic carbonate, a bis(triaklylsilyl)amide base, and a mixture thereof.
14. The process of claim 13 wherein the base is selected from the group consisting of sodium hydride, ium hydride, lithium hydride, sodium methoxide, sodium tert-butoxide, sodium de, potassium tert-butoxide, potassium ethoxide, sodium tert-pentoxide, lithium tert-butoxide, lithium bis(trimethylsilyl)amide, sodium bis(trimethylsilyl)amide, ium bis(trimethylsilyl)amide, lithium carbonate, sodium carbonate, potassium carbonate, cesium carbonate, and a mixture thereof.
15. The process of claim 13 or 14, n the base is sodium methoxide.
16. The process of any one of claims 1 to 15 wherein F-1 is reacted with at least one acid selected from the group consisting of an organic acid, an inorganic acid, an organic carboxylic acids, and mixtures thereof.
17. The process of claim 16 wherein the at least one acid is selected from the group consisting of esulfonic acid, acetic acid, trifluoromethanesulfonic acid, trifluoroacetic acid, hloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, formic acid, butyric acid, propionic acid, benzoic acid, p-toluenesulfonic acid, camphorsulfonic acid, and mixtures thereof.
18. The process of claim 16 or 17, wherein the at least one acid is p-toluenesulfonic acid.
19. The process of any one of claims 1 to 18 wherein L is –CH2-CH2-.
20. The process of any one of claims 1 to 19 n N-1 is .
21. The process of any one of claims 1 to 20 wherein N-1 is in the form of a salt or cocrystal.
22. The s of claim 21 wherein N-1 is .
23. The process of any one of claims 1 to 22 wherein N-1 is in solution.
24. The process of any one of claims 1 to 23 wherein the additive is selected from the group consisting of a carboxylate salt, an inorganic carbonate, a metal hydride, an alkoxide, a water ger and a mixture thereof.
25. The process of any one of claims 1 to 24 wherein the additive is selected from the group consisting of m carbonate, sodium carbonate, potassium carbonate, cesium carbonate, sodium hydride, potassium hydride, lithium hydride, sodium methoxide, sodium tert-butoxide, sodium ethoxide, potassium tert-butoxide, ium ethoxide, sodium tert- pentoxide, lithium tert-butoxide, sodium propionate, potassium propionate, molecular sieves, trimethyl orthoacetate, potassium acetate, sodium acetate, lithium acetate and trimethyl orthoformate.
26. The process of any one of claims 1 to 25 wherein the additive is potassium acetate.
27. The s of any one of claims 1 to 26, wherein G-1 is reacted with at least one reagent selected from the group consisting of metal salts, Lewis acids, sodium thiolate, sodium hexamethyldisiloxane, trifluoroacetic acid, and combinations thereof.
28. The process of claim 27, wherein the at least one reagent is selected from the group consisting of ium bromide, lithium chloride, lithium bromide, lithium iodide, aluminum trichloride, aluminum tribromide, chlorotrimethylsilane, iodotrimethylsilane, boron oride, boron tribromide, sodium ethanethiolate, sodium thyldisiloxane, palladium, boron trifluoride diethyl etherate, and trifluoroacetic acid.
29. The process of claim 27 or 28, wherein the at least one reagent is magnesium bromide.
30. The process of any one of claims 1 to 29 wherein each Ra, Rb, R1, and R2 is, independently C1-C4alkyl.
31. The process of any one of claims 1 to 30 wherein: R2 is –CH3; and/or R1 is –CH3; and/or Ra is –CH3; and/or Rb is –CH3.
32. The process of any one of claims 1 to 31 wherein each Hal is independently –F or -
33. The process of any one of claims 1 to 32 wherein Hal is F.
34. The process of any one of claims 1 to 33 wherein n is 3.
35. The s of any one of claims 1 to 34 wherein J-1 is .
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