MX2023001154A - Analisis mutacional de adn de plasma para la deteccion de cancer. - Google Patents
Analisis mutacional de adn de plasma para la deteccion de cancer.Info
- Publication number
- MX2023001154A MX2023001154A MX2023001154A MX2023001154A MX2023001154A MX 2023001154 A MX2023001154 A MX 2023001154A MX 2023001154 A MX2023001154 A MX 2023001154A MX 2023001154 A MX2023001154 A MX 2023001154A MX 2023001154 A MX2023001154 A MX 2023001154A
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- Prior art keywords
- door
- cancer
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Links
- 206010028980 Neoplasm Diseases 0.000 title abstract 7
- 201000011510 cancer Diseases 0.000 title abstract 5
- 238000001514 detection method Methods 0.000 title 1
- 230000000869 mutational effect Effects 0.000 title 1
- 230000000903 blocking effect Effects 0.000 abstract 4
- 206010069754 Acquired gene mutation Diseases 0.000 abstract 2
- 239000012472 biological sample Substances 0.000 abstract 2
- 238000012544 monitoring process Methods 0.000 abstract 2
- 238000012216 screening Methods 0.000 abstract 2
- 210000002966 serum Anatomy 0.000 abstract 2
- 230000037439 somatic mutation Effects 0.000 abstract 2
- 230000005540 biological transmission Effects 0.000 abstract 1
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
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- B01J19/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
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- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/574—Immunoassay; Biospecific binding assay; Materials therefor for cancer
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
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- G—PHYSICS
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- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
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- G—PHYSICS
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- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
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- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/191—Modifications characterised by incorporating an adaptor
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- C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
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- C12Q2537/00—Reactions characterised by the reaction format or use of a specific feature
- C12Q2537/10—Reactions characterised by the reaction format or use of a specific feature the purpose or use of
- C12Q2537/16—Assays for determining copy number or wherein the copy number is of special importance
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- Chemical & Material Sciences (AREA)
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- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Physics & Mathematics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Analytical Chemistry (AREA)
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- Genetics & Genomics (AREA)
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- Molecular Biology (AREA)
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- Evolutionary Biology (AREA)
- Medical Informatics (AREA)
- Pathology (AREA)
- Biomedical Technology (AREA)
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- Hospice & Palliative Care (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Hematology (AREA)
- Urology & Nephrology (AREA)
- General Physics & Mathematics (AREA)
- Medicinal Chemistry (AREA)
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- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Investigating Or Analysing Biological Materials (AREA)
Abstract
La presente invención se refiere a una frecuencia de mutaciones somáticas en una muestra biológica (por ejemplo, plasma o suero) de un sujeto sometido a la detección o monitoreo de cáncer, que se puede comparar con la del ADN constitucional del mismo sujeto. Un parámetro puede derivarse de estas frecuencias y utilizar para determinar una clasificación de un nivel de cáncer. Los falsos positivos pueden ser filtrados requiriendo que algún locus variante tenga al menos un número especificado de lecturas de secuencia variante (marcas), proporcionando así un parámetro más preciso. Las frecuencias relativas para los diferentes loci variantes pueden ser analizadas para determinar un nivel de heterogeneidad de los tumores en un paciente.
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201261662878P | 2012-06-21 | 2012-06-21 | |
| US201261682725P | 2012-08-13 | 2012-08-13 | |
| US201261695795P | 2012-08-31 | 2012-08-31 | |
| US201261711172P | 2012-10-08 | 2012-10-08 | |
| US13/801,748 US11261494B2 (en) | 2012-06-21 | 2013-03-13 | Method of measuring a fractional concentration of tumor DNA |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| MX2023001154A true MX2023001154A (es) | 2023-02-22 |
Family
ID=52274459
Family Applications (3)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| MX2014016058A MX360264B (es) | 2012-06-21 | 2013-06-14 | Analisis mutacional de adn de plasma para la deteccion de cancer. |
| MX2018013085A MX2018013085A (es) | 2012-06-21 | 2014-12-19 | Analisis mutacional de adn de plasma para la deteccion de cancer. |
| MX2023001154A MX2023001154A (es) | 2012-06-21 | 2014-12-19 | Analisis mutacional de adn de plasma para la deteccion de cancer. |
Family Applications Before (2)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| MX2014016058A MX360264B (es) | 2012-06-21 | 2013-06-14 | Analisis mutacional de adn de plasma para la deteccion de cancer. |
| MX2018013085A MX2018013085A (es) | 2012-06-21 | 2014-12-19 | Analisis mutacional de adn de plasma para la deteccion de cancer. |
Country Status (18)
| Country | Link |
|---|---|
| US (3) | US11261494B2 (es) |
| EP (4) | EP2864501B1 (es) |
| JP (4) | JP6371280B2 (es) |
| KR (7) | KR102375645B1 (es) |
| CN (3) | CN113151474A (es) |
| AU (4) | AU2013278994C1 (es) |
| CA (2) | CA2876327C (es) |
| DK (2) | DK3456843T3 (es) |
| EA (2) | EA037292B1 (es) |
| ES (2) | ES2894479T3 (es) |
| HU (1) | HUE056915T2 (es) |
| IL (5) | IL311127B2 (es) |
| MX (3) | MX360264B (es) |
| PT (1) | PT3456843T (es) |
| SG (2) | SG11201408113QA (es) |
| TW (4) | TWI786428B (es) |
| WO (1) | WO2013190441A2 (es) |
| ZA (1) | ZA201409281B (es) |
Families Citing this family (119)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| KR102222378B1 (ko) | 2007-07-23 | 2021-03-04 | 더 차이니즈 유니버시티 오브 홍콩 | 핵산 서열 불균형의 결정 |
| US8583380B2 (en) | 2008-09-05 | 2013-11-12 | Aueon, Inc. | Methods for stratifying and annotating cancer drug treatment options |
| US20190010543A1 (en) | 2010-05-18 | 2019-01-10 | Natera, Inc. | Methods for simultaneous amplification of target loci |
| US10316362B2 (en) | 2010-05-18 | 2019-06-11 | Natera, Inc. | Methods for simultaneous amplification of target loci |
| US11939634B2 (en) | 2010-05-18 | 2024-03-26 | Natera, Inc. | Methods for simultaneous amplification of target loci |
| US12221653B2 (en) | 2010-05-18 | 2025-02-11 | Natera, Inc. | Methods for simultaneous amplification of target loci |
| US11408031B2 (en) | 2010-05-18 | 2022-08-09 | Natera, Inc. | Methods for non-invasive prenatal paternity testing |
| US9677118B2 (en) | 2014-04-21 | 2017-06-13 | Natera, Inc. | Methods for simultaneous amplification of target loci |
| US11322224B2 (en) | 2010-05-18 | 2022-05-03 | Natera, Inc. | Methods for non-invasive prenatal ploidy calling |
| US12152275B2 (en) | 2010-05-18 | 2024-11-26 | Natera, Inc. | Methods for non-invasive prenatal ploidy calling |
| WO2012040387A1 (en) | 2010-09-24 | 2012-03-29 | The Board Of Trustees Of The Leland Stanford Junior University | Direct capture, amplification and sequencing of target dna using immobilized primers |
| BR112013016708B1 (pt) | 2010-12-30 | 2021-08-17 | Foundation Medicine, Inc | Otimização de análise multigene de amostras de tumor |
| CA2824387C (en) | 2011-02-09 | 2019-09-24 | Natera, Inc. | Methods for non-invasive prenatal ploidy calling |
| US9892230B2 (en) | 2012-03-08 | 2018-02-13 | The Chinese University Of Hong Kong | Size-based analysis of fetal or tumor DNA fraction in plasma |
| US11261494B2 (en) | 2012-06-21 | 2022-03-01 | The Chinese University Of Hong Kong | Method of measuring a fractional concentration of tumor DNA |
| US20150011396A1 (en) | 2012-07-09 | 2015-01-08 | Benjamin G. Schroeder | Methods for creating directional bisulfite-converted nucleic acid libraries for next generation sequencing |
| US20140100126A1 (en) | 2012-08-17 | 2014-04-10 | Natera, Inc. | Method for Non-Invasive Prenatal Testing Using Parental Mosaicism Data |
| US20160040229A1 (en) | 2013-08-16 | 2016-02-11 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| US10876152B2 (en) | 2012-09-04 | 2020-12-29 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| EP4036247B1 (en) | 2012-09-04 | 2024-04-10 | Guardant Health, Inc. | Methods to detect rare mutations and copy number variation |
| US11913065B2 (en) | 2012-09-04 | 2024-02-27 | Guardent Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| US20130309666A1 (en) | 2013-01-25 | 2013-11-21 | Sequenom, Inc. | Methods and processes for non-invasive assessment of genetic variations |
| US20140274738A1 (en) | 2013-03-15 | 2014-09-18 | Nugen Technologies, Inc. | Sequential sequencing |
| EP3421613B1 (en) * | 2013-03-15 | 2020-08-19 | The Board of Trustees of the Leland Stanford Junior University | Identification and use of circulating nucleic acid tumor markers |
| EP3068883B1 (en) | 2013-11-13 | 2020-04-29 | Nugen Technologies, Inc. | Compositions and methods for identification of a duplicate sequencing read |
| SG10201804519RA (en) | 2013-12-28 | 2018-07-30 | Guardant Health Inc | Methods and systems for detecting genetic variants |
| EP3957749A1 (en) * | 2014-04-21 | 2022-02-23 | Natera, Inc. | Detecting tumour specific mutations in biopsies with whole exome sequencing and in cell-free samples |
| US12492429B2 (en) * | 2014-04-21 | 2025-12-09 | Natera, Inc. | Detecting mutations and ploidy in chromosomal segments |
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| KR102696857B1 (ko) | 2014-07-25 | 2024-08-19 | 유니버시티 오브 워싱톤 | 무세포 dna를 생성하는 조직 및/또는 세포 유형을 결정하는 방법 및 이를 사용하여 질환 또는 장애를 확인하는 방법 |
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