Commits · master · Salvatore Cosentino / sonicparanoid2 · GitLab

Sep 12, 2025
- bumped min version for multiple packages · 972837ac
  Salvatore Cosentino authored Sep 12, 2025
  
  View commits for tag 2.0.9 2.0.9
  
  972837ac
- version bump (for release) · 6344d080
  Salvatore Cosentino authored Sep 12, 2025
  
  6344d080
Sep 11, 2025
- fix typos and adjust links · 902f5d8c
  Salvatore Cosentino authored Sep 11, 2025
  
  902f5d8c
- version bump to 2.0.9b1 · f97a9be0
  Salvatore Cosentino authored Sep 11, 2025
  
  f97a9be0
- removed redundant contact information · ae1ba48c
  Salvatore Cosentino authored Sep 11, 2025
  
  ae1ba48c
- bump min build ver to 1.3.0 · c2d59edf
  Salvatore Cosentino authored Sep 11, 2025
  
  View commits for tag 2.0.9a16 2.0.9a16
  
  c2d59edf
- fix gensim versioning error · 91e1cfa4
  Salvatore Cosentino authored Sep 11, 2025
  
  91e1cfa4
- updated release info · 11fa9f89
  Salvatore Cosentino authored Sep 11, 2025
  
  11fa9f89
- update contact and citation · 4b2ad7b4
  Salvatore Cosentino authored Sep 11, 2025
  
  4b2ad7b4
- contact email update · 66dbf632
  Salvatore Cosentino authored Sep 11, 2025
  
  66dbf632
- set min smart-open ver to 7.3.1 · dd11b698
  Salvatore Cosentino authored Sep 11, 2025
  
  dd11b698
- set min gensim ver to 4.3.3 · c61ef501
  Salvatore Cosentino authored Sep 11, 2025
  
  c61ef501
- update email address · e4cb3216
  Salvatore Cosentino authored Sep 11, 2025
  
  e4cb3216
- version bump 2.0.9a15 · dd1b6138
  Salvatore Cosentino authored Sep 11, 2025
  
  dd1b6138
- increased mini cython ver to 3.1.0 · 0f520d4d
  Salvatore Cosentino authored Sep 11, 2025
  
  0f520d4d
Sep 09, 2025
- removed Cython legacy code for dataclasses · 16c70618
  Salvatore Cosentino authored Sep 09, 2025
  
  16c70618
- increase min cython to 3.0.10 · eed857e9
  Salvatore Cosentino authored Sep 09, 2025
  
  eed857e9
Aug 31, 2024
- always use HIGHEST_PROTOCOL for pickling · f1fdc38c
  Salvatore Cosentino authored Aug 31, 2024
  
  f1fdc38c
Aug 28, 2024
- version bump · 66284286
  Salvatore Cosentino authored Aug 28, 2024
  
  66284286
- allow double version for MMseqs binaries · 386c8f52
  Salvatore Cosentino authored Aug 28, 2024
  
  386c8f52
Aug 27, 2024
- minor fixes from pyright · f6f34222
  Salvatore Cosentino authored Aug 27, 2024
  
  f6f34222
- Merge branch 'dev-release-209' of https://gitlab.com/salvo981/sonicparanoid2 into dev-release-209 · 8502b479
  Salvatore Cosentino authored Aug 27, 2024
  8502b479
Aug 26, 2024
- fixed typo · 0fb3203b
  Salvatore Cosentino authored Aug 26, 2024
  
  0fb3203b
- version bump · a6baf0bb
  Salvatore Cosentino authored Aug 26, 2024
  
  a6baf0bb
- detect mini-forge (mamba) installations · 0fccb1aa
  Salvatore Cosentino authored Aug 26, 2024
  
  0fccb1aa
Aug 20, 2024
- add detailed info on how convert MSA and create the profile DB · d3dacfb0
  Salvatore Cosentino authored Aug 20, 2024
  
  d3dacfb0
- specify complete path for each software package included · a92f3d5a
  Salvatore Cosentino authored Aug 20, 2024
  
  a92f3d5a
- version bumb 2.0.9a3 · 3697cc54
  Salvatore Cosentino authored Aug 20, 2024
  
  3697cc54
- update changelog · 5dfa648d
  Salvatore Cosentino authored Aug 20, 2024
  
  5dfa648d
- upgraded linux binaries for blast+ to v2.15.0 · 3f44b404
  Salvatore Cosentino authored Aug 20, 2024
  
  3f44b404
- update required blastp version · d94be97b
  Salvatore Cosentino authored Aug 20, 2024
  
  d94be97b
- add condition for MacOS when retreiving paths to binary files (e.g. mmseqs) · 5bb5150f
  Salvatore Cosentino authored Aug 20, 2024
  
  5bb5150f
- add path to wiki page · b1e34e13
  Salvatore Cosentino authored Aug 20, 2024
  
  b1e34e13
Aug 19, 2024
- remined of things to fix · af6de934
  Salvatore Cosentino authored Aug 19, 2024
  
  af6de934
- allow to install on MacOS using PyPI · 73e66fc2
  Salvatore Cosentino authored Aug 19, 2024
  
  73e66fc2
Aug 17, 2024
- minor imporvements · 9c72364b
  Salvatore Cosentino authored Aug 17, 2024
  
  9c72364b
- create a single function to obtain various sys info · 3c8171cb
  Salvatore Cosentino authored Aug 17, 2024
  
  3c8171cb
- add function to obtain various system information · 5d90d230
  Salvatore Cosentino authored Aug 17, 2024
  
  5d90d230
- first commit for version 2.0.9 · cca88eff
  Salvatore Cosentino authored Aug 17, 2024
  
  cca88eff
Aug 07, 2024
- delete redumdant files · 7602398f
  Salvatore Cosentino authored Aug 07, 2024
  
  7602398f