Commits · v1.4.1 · HumanGenetics AmsterdamUMC / bioinf / pipelines / tanuki

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Feb 09, 2024
- Merge branch 'dev' into 'main' · ea23c52e
  Roxane Boyer authored Feb 09, 2024
  View commits for tag v1.4.1 v1.4.1
  ea23c52e
- / hotfix> Removed mention of fastqc in multiqc · d70749aa
  Roxane Boyer authored Feb 09, 2024
  
  d70749aa
- Merge branch 'dev' into 'main' · dad3a723
  Roxane Boyer authored Feb 09, 2024
  View commits for tag v1.4.0 v1.4.0
  dad3a723
- Focused on rename variables · b6e89e74
  Roxane Boyer authored Feb 09, 2024
  
  b6e89e74
- Fixing the unpaired / paired issue · baf53ccc
  Roxane Boyer authored Feb 09, 2024
  
  baf53ccc
- Fancier solution to detect fastq · 9a36295b
  Roxane Boyer authored Feb 09, 2024
  
  9a36295b
- Trying to concat all reads into one str · d45e9fe7
  Roxane Boyer authored Feb 09, 2024
  
  d45e9fe7
- Giving all reads to STAR · 86e087b6
  Roxane Boyer authored Feb 09, 2024
  
  86e087b6
- Changing a little how to call export-qc option · 2c0bdf4c
  Roxane Boyer authored Feb 09, 2024
  
  2c0bdf4c
- -fix : Reverting env because takes too long to instal env again · 7d189454
  Roxane Boyer authored Feb 09, 2024
  
  7d189454
Feb 08, 2024
- stoopid · 2e417d32
  Roxane Boyer authored Feb 08, 2024
  
  2e417d32
- Updating env of tanuki to add ruamel yaml hopefully · 77872511
  Roxane Boyer authored Feb 08, 2024
  
  77872511
- Import yaml for slack hooks · 5ac77014
  Roxane Boyer authored Feb 08, 2024
  
  5ac77014
- Forgot a mention of fastqc · 9513aab2
  Roxane Boyer authored Feb 08, 2024
  
  9513aab2
- It's workiiiing... Almost · 69e5f84b
  Roxane Boyer authored Feb 08, 2024
  
  69e5f84b
- man · 2f91e78e
  Roxane Boyer authored Feb 08, 2024
  
  2f91e78e
- baka · dfd99836
  Roxane Boyer authored Feb 08, 2024
  
  dfd99836
- ooops · 8c70fe9a
  Roxane Boyer authored Feb 08, 2024
  
  8c70fe9a
- - Feat : Modifying snakemake according to the new init_worflow · c41b0f7c
  Roxane Boyer authored Feb 08, 2024
  c41b0f7c
- - feat : Tested sucessfully test data set #17 and as well sample recognition... · d6d42185
  Roxane Boyer authored Feb 08, 2024
  d6d42185
- Changing export qc option for test mode · 06a54f16
  Roxane Boyer authored Feb 08, 2024
  
  06a54f16
- test2 · 18ca20a7
  Roxane Boyer authored Feb 08, 2024
  
  18ca20a7
- test · 525b1e70
  Roxane Boyer authored Feb 08, 2024
  
  525b1e70
- test · 55a4fbcb
  Roxane Boyer authored Feb 08, 2024
  
  55a4fbcb
- Test · 91b1d539
  Roxane Boyer authored Feb 08, 2024
  
  91b1d539
- Dammit · b173c787
  Roxane Boyer authored Feb 08, 2024
  
  b173c787
- Changing test output · a7c873b2
  Roxane Boyer authored Feb 08, 2024
  
  a7c873b2
- oooopsie · b04c4be2
  Roxane Boyer authored Feb 08, 2024
  
  b04c4be2
- Oopsie · 1c322010
  Roxane Boyer authored Feb 08, 2024
  
  1c322010
- Test · 3538364a
  Roxane Boyer authored Feb 08, 2024
  
  3538364a
- test · 594cbb1d
  Roxane Boyer authored Feb 08, 2024
  
  594cbb1d
- testing · 61473268
  Roxane Boyer authored Feb 08, 2024
  
  61473268
- Forgot stuff · e64b6fdb
  Roxane Boyer authored Feb 08, 2024
  
  e64b6fdb
- typos · f5115f03
  Roxane Boyer authored Feb 08, 2024
  
  f5115f03
- Working on #17 and #16 · b5a5a520
  Roxane Boyer authored Feb 08, 2024
  
  b5a5a520
Feb 07, 2024
- - Starting to work on adding a sample parsing for RNAseq pipeline · 9f6af4f9
  Roxane Boyer authored Feb 07, 2024
  
  9f6af4f9
- - hotfix: Correct genome reference · 5330c9c7
  Roxane Boyer authored Feb 07, 2024
  
  5330c9c7
Jan 23, 2024
- Updae of README · 3c2fc116
  Roxane Boyer authored Jan 23, 2024
  
  3c2fc116
- Increasing width · a226a372
  Roxane Boyer authored Jan 23, 2024
  
  a226a372
- New banner · 9eb88b2e
  Roxane Boyer authored Jan 23, 2024
  
  9eb88b2e