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  1. mbovpan mbovpan Public

    Mbovpan is a nextflow bioinformatic pipeline for Mycobacterium bovis pangenome analysis. The goal of Mbovpan is to help researchers to study the M. bovis pangenome in an automatic and easy way.

    Nextflow 4 1

  2. MetagenomicsToolsEvaluation MetagenomicsToolsEvaluation Public

    This repository contains scripts to run 9 different shotgun metagenomics profiling software on a rat tissue dataset as well as scripts for their downstream analysis (import into R, alpha/beta diver…

    Shell 3

  3. Lab-SocialGeneticStructure Lab-SocialGeneticStructure Public

    A Repository to combine information regarding the data for covid-19, human TB, and how social structures impact transmission.

    HTML 1

  4. Bovis-PangenomeOfReservoirs Bovis-PangenomeOfReservoirs Public

    HTML

  5. QualifyingExamExamples QualifyingExamExamples Public

    A collection of Written & Oral Exam materials to make preparing for the UGA QualifyingExam

    2

  6. MinION_Transcriptome MinION_Transcriptome Public

    Python

Repositories

Showing 9 of 9 repositories
  • mbovpan Public

    Mbovpan is a nextflow bioinformatic pipeline for Mycobacterium bovis pangenome analysis. The goal of Mbovpan is to help researchers to study the M. bovis pangenome in an automatic and easy way.

    salvadorlab/mbovpan’s past year of commit activity
    Nextflow 4 1 4 0 Updated May 21, 2024
  • LegallSalvador_MbovisPangenome Public

    Data, scripts, and useful resources for the analysis of global M. bovis isolates

    salvadorlab/LegallSalvador_MbovisPangenome’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 18, 2023
  • MinION_Transcriptome Public
    salvadorlab/MinION_Transcriptome’s past year of commit activity
    Python 0 0 1 0 Updated Apr 13, 2023
  • MetagenomicsToolsEvaluation Public

    This repository contains scripts to run 9 different shotgun metagenomics profiling software on a rat tissue dataset as well as scripts for their downstream analysis (import into R, alpha/beta diversity, & differential abundant analysis).

    salvadorlab/MetagenomicsToolsEvaluation’s past year of commit activity
    Shell 3 0 1 0 Updated Jan 17, 2023
  • LegallSalvador2022_MbovisAcrossScales Public

    files necessary to create figures

    salvadorlab/LegallSalvador2022_MbovisAcrossScales’s past year of commit activity
    0 0 1 0 Updated Jun 10, 2022
  • Summer2021_mbov Public

    Materials for paper submission

    salvadorlab/Summer2021_mbov’s past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2021
  • QualifyingExamExamples Public

    A collection of Written & Oral Exam materials to make preparing for the UGA QualifyingExam

    salvadorlab/QualifyingExamExamples’s past year of commit activity
    0 2 0 0 Updated Aug 29, 2021
  • Bovis-PangenomeOfReservoirs Public
    salvadorlab/Bovis-PangenomeOfReservoirs’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 22, 2021
  • Lab-SocialGeneticStructure Public

    A Repository to combine information regarding the data for covid-19, human TB, and how social structures impact transmission.

    salvadorlab/Lab-SocialGeneticStructure’s past year of commit activity
    HTML 1 0 0 0 Updated Jun 12, 2020

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