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CUBI Core Unit Bioinformatics, Berlin Institute of Health
- Berlin
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12:41
(UTC +01:00) - https://fullstackbio.de
- https://orcid.org/0000-0002-3051-1763
- in/manuel-holtgrewe
Highlights
- Pro
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vultr Public
vulTR characterizes MUC1 variable number tandem repeats based on alignment-free variant calling from Kestrel
Python MIT License UpdatedOct 31, 2024 -
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docs Public
Forked from actualbudget/docsMain website and documentation for Actual Budget
JavaScript UpdatedOct 6, 2024 -
hgvs Public
Forked from biocommons/hgvsPython library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
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haplotype-lso Public
Haplotyping of C. Liberibacter solanacearum from Sanger data
Python MIT License UpdatedMar 20, 2024 -
cdot Public
Forked from SACGF/cdotTranscript versions for HGVS libraries
Python MIT License UpdatedMar 8, 2024 -
hpo Public
Forked from anergictcell/hpoRust library for the Human Phenotype Ontology
Rust UpdatedJan 19, 2024 -
vuetify3-vue3-test Public
Example of using vue3/vuetify3 with unit tests
TypeScript UpdatedDec 24, 2023 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedNov 22, 2023 -
noodles Public
Forked from zaeleus/noodlesBioinformatics I/O libraries in Rust
Rust MIT License UpdatedOct 23, 2023 -
snapshottest Public
Forked from syrusakbary/snapshottestSnapshot Testing utils for Python 📸
Python MIT License UpdatedSep 22, 2023 -
drf-pydantic Public
Forked from georgebv/drf-pydanticUse pydantic with the Django REST framework
Python MIT License UpdatedSep 21, 2023 -
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedJun 13, 2023 -
rust-rocksdb Public
Forked from rust-rocksdb/rust-rocksdbrust wrapper for rocksdb
Rust Apache License 2.0 UpdatedMay 9, 2023 -
CADA Public
Forked from Chengyao-Peng/CADAJupyter Notebook GNU General Public License v3.0 UpdatedMay 5, 2023 -
biocommons.seqrepo Public
Forked from biocommons/biocommons.seqreponon-redundant, compressed, journalled, file-based storage for biological sequences
Python Apache License 2.0 UpdatedMay 4, 2023 -
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uta Public
Forked from biocommons/utaUniversal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image
Python Apache License 2.0 UpdatedFeb 16, 2023 -
wthr-server Public archive
Weather data sink and dashboard (Flask+Plotly Dash)
Python MIT License UpdatedFeb 2, 2023 -
holtgrewe.github.io Public
Full-stack Bioinformatics (my blog - I'm so 00s')
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tensorflow-feedstock Public
Forked from conda-forge/tensorflow-feedstockA conda-smithy repository for tensorflow.
Shell BSD 3-Clause "New" or "Revised" License UpdatedJan 16, 2023 -
alertmanager Public
Forked from prometheus/alertmanagerPrometheus Alertmanager
Go Apache License 2.0 UpdatedDec 22, 2022 -
inline-html Public
Forked from fschulze/inline-htmlPython script for inlining CSS stylesheets and conversion of resources to data-uri
Python UpdatedDec 20, 2022 -
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mason3 Public
Mason read simulator version 3 (with 100% more emojis and Rust)
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snakemake-profiles-slurm Public
Forked from Snakemake-Profiles/slurmCookiecutter for snakemake slurm profile
Python MIT License UpdatedJun 24, 2022 -
pb-human-wgs-workflow-snakemake Public
Forked from PacificBiosciences/pb-human-wgs-workflow-snakemakeWorkflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads
Python BSD 3-Clause Clear License UpdatedJun 15, 2022 -