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  1. mfumagalli/ngsTools mfumagalli/ngsTools Public

    Programs to analyse NGS data for population genetics purposes

    R 169 65

  2. ngsDist ngsDist Public

    Estimation of pairwise distances under a probabilistic framework

    C++ 10 7

  3. ngsF-HMM ngsF-HMM Public

    Estimation of per-individual inbreeding tracts under a probabilistic framework

    C++ 13 6

  4. ngsF ngsF Public

    Estimation of per-individual inbreeding coefficients under a probabilistic framework

    C 20 8

  5. ngsLD ngsLD Public

    Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework

    C++ 45 7

  6. prune_graph prune_graph Public

    Fast prunning of graphs based on node weights

    Rust