Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

PEtab visualization tool

Advanced Multilanguage Interface to CVODES and IDAS

PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

distributed, likelihood-free inference

python Parameter EStimation TOolbox

Just Another Beautiful progress BAR

PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology