Starred repositories
A Nextflow pipeline for the production of genome assemblies from long reads and Hi-C data for the Tree of Life project
GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
Structural variation caller using third generation sequencing
napari: a fast, interactive, multi-dimensional image viewer for python
Portable package manager for Neovim that runs everywhere Neovim runs. Easily install and manage LSP servers, DAP servers, linters, and formatters.
Find, Filter, Preview, Pick. All lua, all the time.
An incremental parsing system for programming tools
Nvim Treesitter configurations and abstraction layer
Removes large or troublesome blobs like git-filter-branch does, but faster. And written in Scala
Chai-1, SOTA model for biomolecular structure prediction
Automatically exported from code.google.com/p/figtree
An extremely fast Python package and project manager, written in Rust.
HMMER: biological sequence analysis using profile HMMs
Python 3 library with good support for both reading and writing VCF
jamescasbon / PyVCF
Forked from jdoughertyii/PyVCFA Variant Call Format reader for Python.
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
Genome-scale protein function classification
Genome-scale design tool for oligo hybridization probes
Rainbow CSV - Vim plugin: Highlight columns in CSV and TSV files and run queries in SQL-like language
Accurate sample inference from amplicon data with single nucleotide resolution
TEtrimmer: a novel tool to automate manual curation of transposable elements