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ondist

Commits on Oct 20, 2026
- sync: assemble 0.7-nh13.dev+e4fd5f7 on upstream 74bdd48
  web-flow
  committed
  2d3e83b
- sync: assemble 0.7-nh13.dev+f7d7f14 on upstream 74bdd48
  web-flow
  committed
  e79a76c
Commits on Sep 7, 2026
- sync: assemble 0.7-nh13.dev+357865b on upstream f0e1174
  web-flow
  committed
  3acddbc
Commits on Sep 6, 2026
- sync: assemble 0.7-nh13.dev+7df2016 on upstream f0e1174
  web-flow
  committed
  c30023a
Commits on Aug 23, 2026
- sync: assemble 0.7-nh13.dev+3d10d42 on upstream f0e1174
  web-flow
  committed
  c887691
Commits on Aug 22, 2026
- sync: assemble 0.7-nh13.dev+06ab16c on upstream f0e1174
  web-flow
  committed
  3f6bd4a
- sync: assemble 0.7-nh13.dev+6ca35d1 on upstream f0e1174
  web-flow
  committed
  b0eb65c
Commits on Aug 20, 2026
- sync: assemble 0.7-nh13.dev+1647092 on upstream f0e1174
  web-flow
  committed
  a708168
Commits on Aug 8, 2026
- sync: assemble 0.7-nh13.dev+55906d5 on upstream c42d875
  web-flow
  committed
  3fdf5ad
- sync: assemble 0.7-nh13.dev+32d519b on upstream c42d875
  web-flow
  committed
  0faa4fe
Commits on Aug 7, 2026
- sync: assemble 0.7-nh13.dev+6304587 on upstream d6d9f87
  web-flow
  committed
  23d2376
Commits on Aug 3, 2026
- sync: assemble 0.6-nh13.dev+f3e277f on upstream ebc59ea
  web-flow
  committed
  86a27e0
- sync: assemble 0.6-nh13.dev+037d411 on upstream ebc59ea
  web-flow
  committed
  95703a7
- sync: assemble 0.6-nh13.dev+5b59eeb on upstream ebc59ea
  web-flow
  committed
  800583d
- sync: assemble 0.6-nh13.dev+173bcab on upstream ebc59ea
  nh13
  committed
  f32240e
- build: identify this build as 0.6-nh13.dev+895fb2e
  web-flow
  committed
  35d3a86
- merge alt-liftgroup (feat/alt-aware-liftgroup)
  web-flow
  committed
  895fb2e
- merge submem-ablation (feat/submem-ablation)
  web-flow
  committed
  11872f1
- merge soft-clip-penalty (feat/soft-clip-penalty)
  web-flow
  committed
  a991796
- merge meth-sam-tags (feat/issue-14-meth-sam-tags)
  web-flow
  committed
  6d59460
- merge meth-cleanups (chore/meth-cleanups)
  web-flow
  committed
  cb99c47
- feat(meth): add --meth-tags to select which Bismark tags --meth emits
  nh13
  committed
  e1ab15c
Commits on Jul 30, 2026
- Release minibwa-0.6 (r416)
  lh3
  committed
  ebc59ea
Commits on Jul 27, 2026
- r415: -I was not working
  lh3
  committed
  8ca238f
Commits on Jul 26, 2026
- Release minibwa-0.5 (r414)
  lh3
  committed
  3065ca8
Commits on Jul 24, 2026
- r412: renamed --xa-ratio to --outs
  lh3
  committed
  bb39631
Commits on Jul 20, 2026
- r411: added --xa-ratio and -I; document new opts
  lh3
  committed
  84019dc
- r410: refactored mmap
  lh3
  committed
  0e6367c
Commits on Jul 19, 2026
- r409: added --mmap=lite mode
  lh3
  committed
  f88db46
- add --mmap option to load the index via mmap()
  
  lh3
  and
  claude
  committed
  d46dd7b
Commits on Jul 16, 2026
- r405: support bs-seq in APIs
  lh3
  committed
  317a3bb
- r404: improve paired-end mapq
  lh3
  committed
  98e89de
Commits on Jul 12, 2026
- Release minibwa-0.4 (r400)
  lh3
  committed
  b2dcea9
Commits on Jul 5, 2026
- r399: penalize clipping during rescoring
  lh3
  committed
  870ce8e
Commits on Jun 30, 2026
- r396: fixed a few typos in CLI help messages
  lh3
  committed
  84d4135

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Commits on Jun 30, 2026