Repository navigation

Commits

History for

onavx2

Commits on Jun 15, 2026
- Release minibwa-0.1 (r363)
  lh3
  committed
  2109737
- r361: output SAM by default
  lh3
  committed
  343a451
Commits on May 27, 2026
- r352: heuristic to lower bs-seq mapq
  lh3
  committed
  2757adb
- r351: trigger matesw for LCR reads
  lh3
  committed
  d599bf4
Commits on May 26, 2026
- r350: fixed a bug in seed split under --meth
  lh3
  committed
  ee27d1b
- r349: resumed versioning
  lh3
  committed
  14f3b0a
Commits on May 20, 2026
- r332: further optimization by antigravity
  lh3
  committed
  313ef54
- r331: minor optimization
  lh3
  committed
  6682bfb
Commits on May 19, 2026
- r329: reduced unnecessary extension a little bit
  lh3
  committed
  6a60f45
Commits on May 18, 2026
- r328: fixed incorrect score sum in PE mode
  lh3
  committed
  5dd6642
Commits on May 10, 2026
- r318: revert; also disable pairing in ex-batch
  lh3
  committed
  20ed35f
- r316: move meth conversion into inner functions
  lh3
  committed
  1496158
- r311: bugfix in mate rescue
  lh3
  committed
  760a859
Commits on May 9, 2026
- r310: support bs-seq in public API
  lh3
  committed
  e1ebe92
- r309: support bs-seq in mb_map public API
  lh3
  committed
  38077ab
- r308: is_pe is redundant in mb_map_batch
  lh3
  committed
  bd09926
- r307: documented the --meth mode
  lh3
  committed
  c11cede
Commits on May 8, 2026
- wip: add is_meth param to mb_idx_load, rename ex-sgl to ex-one
  
  lh3
  and
  claude
  committed
  7f008a1
Commits on May 5, 2026
- r291: reduce poor mate rescue given good alignment
  lh3
  committed
  befa657
- r290: fixed unshadowed chimeric hits after rescue
  
  lh3
  and
  gemini-cli
  committed
  5c997ee
- r289: mate rescue from both ends
  lh3
  committed
  c2d25bb
Commits on May 3, 2026
- r285: added mb_map_batch() for batch alignment
  
  lh3
  and
  claude
  committed
  3f9fb44
- r284: finished the simple API
  lh3
  committed
  b119f58
Commits on May 2, 2026
- r283: update versioning
  lh3
  committed
  84f4faa
Commits on Apr 26, 2026
- r271: tuned mapQ for long reads
  lh3
  committed
  5292ce4
- r270: fixed unintended chain sorting
  lh3
  committed
  74f77fb
Commits on Apr 24, 2026
- r269: fix inconsistent subchain selection
  lh3
  committed
  5f5edb6
- r268: fixed an out-of-bound access
  lh3
  committed
  5f794b9
Commits on Apr 21, 2026
- r265: added Usage
  lh3
  committed
  6030fcf
Commits on Apr 20, 2026
- r262: trade accuracy for performance
  lh3
  committed
  d8e9226
- r261: fix a bug in the last commit
  lh3
  committed
  efec5fc
Commits on Apr 19, 2026
- r260: adaptive batch size
  lh3
  committed
  d01698d
- r259: mix short- and long-read mapq
  lh3
  committed
  cf61e30
Commits on Apr 18, 2026
- r258: add license; optional gpl code and mimalloc
  lh3
  committed
  f465348
- r257: include the mimalloc source code
  lh3
  committed
  86ed795

Breadcrumbs

User selector

Datepicker

Commit history

Commits on Jun 15, 2026

Commits on May 27, 2026

Commits on May 26, 2026

Commits on May 20, 2026

Commits on May 19, 2026

Commits on May 18, 2026

Commits on May 10, 2026

Commits on May 9, 2026

Commits on May 8, 2026

Commits on May 5, 2026

Commits on May 3, 2026

Commits on May 2, 2026

Commits on Apr 26, 2026

Commits on Apr 24, 2026

Commits on Apr 21, 2026

Commits on Apr 20, 2026

Commits on Apr 19, 2026

Commits on Apr 18, 2026