8000 History for l2bit.h - nh13/minibwa · GitHub

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Commits on May 26, 2026
- removed l2b_getseq_meth
  lh3
  committed
  c058ae5
Commits on May 10, 2026
- r316: move meth conversion into inner functions
  lh3
  committed
  1496158
Commits on May 8, 2026
- wip: base alignment works for tiny test dataset
  lh3
  committed
  1c58d90
- Add l2b_intv2cid_meth() and refactor binary search to l2b_pos2cid()
  
  lh3
  and
  claude
  committed
  4c49814
- wip: add l2b_getseq_meth() for BS-seq base alignment
  
  lh3
  and
  claude
  committed
  3ef258d
- wip: added l2b_save_pac_meth() for BS-seq indexing
  
  lh3
  and
  claude
  committed
  1d8bde7
Commits on Jan 18, 2026
- add getambi [ag+gp]
  lh3
  committed
  1eb3c8b
Commits on Jan 16, 2026
- don't get revcomp from l2b_getseq()
  lh3
  committed
  c2132d7
Commits on Jan 12, 2026
- revamped the coordinate system to match minimap2
  lh3
  committed
  2196100
Commits on Oct 19, 2025
- output real coordinates in seed
  lh3
  committed
  a1a0788
- added overall header minibwa.h
  lh3
  committed
  3c4500b
Commits on Oct 17, 2025
- save in the BWA pac format
  lh3
  committed
  4c14f77
- will do double strand in a different way
  lh3
  committed
  bfa28e0
- proper double strand
  lh3
  committed
  682281f
- backup; changes coming
  lh3
  committed
  5c993e1
- added l2bit; not tested
  lh3
  committed
  455048b
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