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History for

onavx2

Commits on May 26, 2026
- removed l2b_getseq_meth
  lh3
  committed
  c058ae5
- in the meth mode, split at disallowed mismatches
  lh3
  committed
  0f53506
Commits on May 10, 2026
- r316: move meth conversion into inner functions
  lh3
  committed
  1496158
Commits on May 8, 2026
- Add l2b_intv2cid_meth() and refactor binary search to l2b_pos2cid()
  
  lh3
  and
  claude
  committed
  4c49814
- wip: add l2b_getseq_meth() for BS-seq base alignment
  
  lh3
  and
  claude
  committed
  3ef258d
- wip: added l2b_save_pac_meth() for BS-seq indexing
  
  lh3
  and
  claude
  committed
  1d8bde7
Commits on Apr 12, 2026
- fixed two memory leaks; there are more
  lh3
  committed
  351354c
Commits on Apr 7, 2026
- fixed a Makefile issue
  lh3
  committed
  8f174bd
Commits on Jan 18, 2026
- removed an empty line
  lh3
  committed
  a8a7c24
- retrieve ambiguous bases
  lh3
  committed
  869b473
- add getambi [ag+gp]
  lh3
  committed
  1eb3c8b
Commits on Jan 16, 2026
- don't get revcomp from l2b_getseq()
  lh3
  committed
  c2132d7
Commits on Jan 15, 2026
- added -S and -C
  lh3
  committed
  a0b6be7
Commits on Jan 12, 2026
- revamped the coordinate system to match minimap2
  lh3
  committed
  2196100
Commits on Oct 19, 2025
- output real coordinates in seed
  lh3
  committed
  a1a0788
- added overall header minibwa.h
  lh3
  committed
  3c4500b
Commits on Oct 17, 2025
- code cleanup
  lh3
  committed
  2e612f5
- save in the BWA pac format
  lh3
  committed
  4c14f77
- will do double strand in a different way
  lh3
  committed
  bfa28e0
- proper double strand
  lh3
  committed
  682281f
- backup; changes coming
  lh3
  committed
  5c993e1
- added l2bit; not tested
  lh3
  committed
  455048b
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Commit history

Commits on May 26, 2026

Commits on May 10, 2026

Commits on May 8, 2026

Commits on Apr 12, 2026

Commits on Apr 7, 2026

Commits on Jan 18, 2026

Commits on Jan 16, 2026

Commits on Jan 15, 2026

Commits on Jan 12, 2026

Commits on Oct 19, 2025

Commits on Oct 17, 2025