8000 add missing lint test documentation and add pre-commit check for them by mashehu · Pull Request #4052 · nf-core/tools · GitHub
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@mashehu
@mashehu mashehu commented Feb 18, 2026
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@mashehu
mashehu requested a review from mirpedrol February 18, 2026 19:23
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codecov 8000 Bot commented Feb 18, 2026 •
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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 78.45%. Comparing base (0345e8b) to head (fc818ee).
⚠️ Report is 1 commits behind head on dev.

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@mashehu mashehu added this to the 4.0.0 milestone Mar 31, 2026
@JulianFlesch JulianFlesch left a comment
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Looking good. But some of these new checks are failing if run on our existing linting functionality.
For example:

tools/nf_core/modules/lint/module_changes.py:67: 'check_local_copy' used in module_changes() but not documented in its docstring

We can fix these also later, when the linting tests are changed

@mashehu
mashehu merged commit 7feb0a2 into nf-core:dev Apr 1, 2026
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