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🏷 Visualize and optionally limit the size of your Pull Requests

Shell 402 78 Updated Oct 2, 2026
Python 10 12 Updated Nov 5, 2026

🤗 smolagents: a barebones library for agents that think in code.

Python 30,232 3,198 Updated Nov 3, 2026

This repository contains the Hugging Face Agents Course.

MDX 34,535 2,477 Updated Nov 3, 2026

A workflow language for data-driven computational pipelines

Groovy 3,524 822 Updated Nov 6, 2026

Drawing centromere constriction at chromosome ideograms, plotted with karyoploteR package from R

HTML 2 Updated May 10, 2022

Run INSERT-seq as an nf-core pipeline

Nextflow 1 Updated Dec 20, 2021

Stochastic Testing and Input Manipulation for Unbiased Learning Systems

Nextflow 32 14 Updated Oct 26, 2026

A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.

Nextflow 41 14 Updated Nov 5, 2026

Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

Groovy 58 32 Updated Nov 6, 2026

Simple test framework for Nextflow pipelines

Java 194 44 Updated Apr 27, 2026

A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.

Groovy 29 12 Updated Nov 5, 2026

Params validation plugin for Nextflow pipelines

Groovy 47 18 Updated Aug 7, 2024

A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as t…

Nextflow 65 39 Updated Oct 26, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 1 Updated Dec 16, 2025

Python package with helper tools for the nf-core community.

Python 1 Updated Apr 24, 2026

Python package with helper tools for the nf-core community.

Python 330 268 Updated Nov 6, 2026

Repository to host tool-specific module files for the Nextflow DSL2 community!

Nextflow 436 1,138 Updated Nov 6, 2026
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