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DRAFT: ASV Benchmark for High Resolution MPAS Atmosphere Grids #958

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@philipc2 philipc2 commented Sep 15, 2024

Closes #956

Overview

@philipc2 philipc2 changed the title DRAFT: ASV Benchmark for 30,15, 7.5, & 3.75km Grids DRAFT: ASV Benchmark for High Resolution MPAS Atmosphere Grids Sep 15, 2024
@philipc2 philipc2 added the run-benchmark Run ASV benchmark workflow label Sep 15, 2024
@philipc2 philipc2 linked an issue Sep 15, 2024 that may be closed by this pull request
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github-actions bot commented Sep 15, 2024

ASV Benchmarking

Benchmark Comparison Results

Benchmarks that have improved:

Change Before [f50e4bb] After [6a509e3] Ratio Benchmark (Parameter)
- 406M 354M 0.87 mpas_ocean.Integrate.peakmem_integrate('480km')

Benchmarks that have stayed the same:

Change Before [f50e4bb] After [6a509e3] Ratio Benchmark (Parameter)
failed failed n/a face_bounds.Bounds.time_bounds
383M 383M 1.00 face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc'))
384M 385M 1.00 face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc'))
383M 387M 1.01 face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc'))
382M 386M 1.01 face_bounds.FaceBounds.peakmem_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc'))
1.56±0.01s 1.60±0s 1.03 face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/mpas/QU/oQU480.231010.nc'))
225±0.1ms 226±1ms 1.01 face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/scrip/outCSne8/outCSne8.nc'))
2.00±0s 2.04±0s 1.02 face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/geoflow-small/grid.nc'))
7.73±0.1ms 7.58±0.04ms 0.98 face_bounds.FaceBounds.time_face_bounds(PosixPath('/home/runner/work/uxarray/uxarray/test/meshfiles/ugrid/quad-hexagon/grid.nc'))
1.72±0.03s 1.75±0.01s 1.01 import.Imports.timeraw_import_uxarray
643±4ms 657±8ms 1.02 mpas_ocean.ConnectivityConstruction.time_face_face_connectivity('120km')
40.7±0.7ms 42.1±0.4ms 1.03 mpas_ocean.ConnectivityConstruction.time_face_face_connectivity('480km')
1.84±0.01ms 1.87±0.05ms 1.02 mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face('120km')
495±10μs 497±20μs 1.00 mpas_ocean.ConnectivityConstruction.time_n_nodes_per_face('480km')
1.35±0.01μs 1.32±0.01μs 0.98 mpas_ocean.ConstructTreeStructures.time_ball_tree('120km')
320±8ns 316±10ns 0.99 mpas_ocean.ConstructTreeStructures.time_ball_tree('480km')
812±10ns 831±4ns 1.02 mpas_ocean.ConstructTreeStructures.time_kd_tree('120km')
296±1ns 288±7ns 0.97 mpas_ocean.ConstructTreeStructures.time_kd_tree('480km')
402M 402M 1.00 mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('120km', False)
391M 391M 1.00 mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('120km', True)
362M 362M 1.00 mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('480km', False)
361M 361M 1.00 mpas_ocean.GeoDataFrame.peakmem_to_geodataframe('480km', True)
1.03±0.01s 1.04±0s 1.01 mpas_ocean.GeoDataFrame.time_to_geodataframe('120km', False)
58.0±1ms 57.0±0.5ms 0.98 mpas_ocean.GeoDataFrame.time_to_geodataframe('120km', True)
79.1±2ms 78.0±0.7ms 0.99 mpas_ocean.GeoDataFrame.time_to_geodataframe('480km', False)
5.71±0.2ms 5.40±0.2ms 0.95 mpas_ocean.GeoDataFrame.time_to_geodataframe('480km', True)
265M 263M 0.99 mpas_ocean.Gradient.peakmem_gradient('120km')
241M 241M 1.00 mpas_ocean.Gradient.peakmem_gradient('480km')
2.68±0.01ms 2.68±0.02ms 1.00 mpas_ocean.Gradient.time_gradient('120km')
287±1μs 286±2μs 1.00 mpas_ocean.Gradient.time_gradient('480km')
225±10μs 242±10μs 1.08 mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices('120km')
121±0.4μs 120±0.8μs 1.00 mpas_ocean.HoleEdgeIndices.time_construct_hole_edge_indices('480km')
370M 371M 1.00 mpas_ocean.Integrate.peakmem_integrate('120km')
179±2ms 177±0.6ms 0.98 mpas_ocean.Integrate.time_integrate('120km')
11.8±0.5ms 12.0±0.02ms 1.02 mpas_ocean.Integrate.time_integrate('480km')
346±3ms 347±0.8ms 1.00 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'exclude')
345±1ms 346±3ms 1.00 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'include')
349±4ms 345±3ms 0.99 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('120km', 'split')
22.3±0.3ms 22.8±0.3ms 1.02 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'exclude')
22.6±0.3ms 22.3±0.5ms 0.99 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'include')
22.9±0.5ms 22.5±0.5ms 0.98 mpas_ocean.MatplotlibConversion.time_dataarray_to_polycollection('480km', 'split')
54.8±0.2ms 54.7±0.1ms 1.00 mpas_ocean.RemapDownsample.time_inverse_distance_weighted_remapping
44.4±0.1ms 44.3±0.1ms 1.00 mpas_ocean.RemapDownsample.time_nearest_neighbor_remapping
360±1ms 359±0.5ms 1.00 mpas_ocean.RemapUpsample.time_inverse_distance_weighted_remapping
264±1ms 263±0.6ms 1.00 mpas_ocean.RemapUpsample.time_nearest_neighbor_remapping
239M 237M 0.99 quad_hexagon.QuadHexagon.peakmem_open_dataset
237M 236M 1.00 quad_hexagon.QuadHexagon.peakmem_open_grid
6.50±0.04ms 6.62±0.04ms 1.02 quad_hexagon.QuadHexagon.time_open_dataset
5.61±0.09ms 5.62±0.08ms 1.00 quad_hexagon.QuadHexagon.time_open_grid

@philipc2 philipc2 removed the run-benchmark Run ASV benchmark workflow label Sep 18, 2024
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ASV Benchmark for High-Resolution Grids
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