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Histopathology Research

Collection of Repositories related to Histopathology and Image Analysis

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  1. Deeplearning-digital-pathology Deeplearning-digital-pathology Public

    Forked from bdunnette/Deeplearning-digital-pathology

    Full package for applying deep learning to virtual slides.

    Python 3

  2. Histopathology-Imaging Histopathology-Imaging Public

    Forked from sarahmu/Histopathology-Imaging

    CS 231N Project

    Python 2

  3. Histopathologic_Cancer_Detection Histopathologic_Cancer_Detection Public

    Forked from HariniNarasimhan/Histopathologic_Cancer_Detection

    The Kaggle Competition as Histopathologic cancer detection is to identify the metastatic tissue in the histopathology scans of lymph nodes

    Jupyter Notebook 1

  4. proc_histopathology_image proc_histopathology_image Public

    Forked from binLearning/proc_histopathology_image

    Preprocessing prostate biopsy specimen images which will be used for deep learning.

    Python 1

  5. Quantitative-Histology Quantitative-Histology Public

    Forked from ritamluis/Quantitative-Histology

    Image processing of histopathology slides

    Jupyter Notebook 1

  6. PC-CHiP PC-CHiP Public

    Forked from gerstung-lab/PC-CHiP

    Pan-Cancer Computational Histopathology

    Python 1

Repositories

Showing 10 of 485 repositories
  • pyslyde Public Forked from PharosKCL/pyslyde

    Histopathology whole slide image library

    histopathology/pyslyde's past year of commit activity
    Python 0 MIT 8 0 0 Updated Oct 30, 2026
  • wsi-rs Public Forked from frames-sg/wsi-rs

    Rust whole-slide image (WSI) reader for digital pathology: open SVS, NDPI, DICOM VL WSI, CZI, MIRAX, VSI, and TIFF slides with tile/region access and JPEG/JPEG 2000/HTJ2K decode.

    histopathology/wsi-rs's past year of commit activity
    Rust 1 3 0 0 Updated Oct 30, 2026
  • wsi-dicom Public Forked from frames-sg/wsi-dicom

    Convert whole-slide imaging files to DICOM VL Whole Slide Microscopy

    histopathology/wsi-dicom's past year of commit activity
    Rust 0 1 0 0 Updated Oct 30, 2026
  • medical-imaging Public Forked from GoogleCloudPlatform/medical-imaging

    Accelerate ingestion/transformation of pathology images into DICOMWeb

    histopathology/medical-imaging's past year of commit activity
    Python 0 Apache-2.0 15 0 0 Updated Oct 26, 2026
  • SlidePrep Public Forked from INOU-2025/SlidePrep

    Microscopy image stitching pipeline tool

    histopathology/SlidePrep's past year of commit activity
    Python 0 MIT 1 0 0 Updated Oct 9, 2026
  • qTrace Public Forked from McKeeInformatics/qTrace

    Open-source QuPath extension for real-time workflow provenance capture

    histopathology/qTrace's past year of commit activity
    Java 0 GPL-3.0 1 0 0 Updated Oct 9, 2026
  • cytomine Public Forked from cytomine/cytomine

    A web platform for collaborative analysis of very large bio-medical images

    histopathology/cytomine's past year of commit activity
    Java 0 Apache-2.0 12 0 0 Updated Sep 11, 2026
  • cytario-web Public Forked from cytario/cytario-web

    Image Management System for Digital Pathology at any scale. Part of the cytario platform.

    histopathology/cytario-web's past year of commit activity
    TypeScript 0 AGPL-3.0 1 0 0 Updated Aug 28, 2026
  • hover_next_train Public Forked from digitalpathologybern/hover_next_train

    Training/Evaluation code for HoVer-NeXt

    histopathology/hover_next_train's past year of commit activity
    Python 0 GPL-3.0 10 0 0 Updated Aug 26, 2026
  • HistoCAM_Nature_Communications Public Forked from coopermaira/HistoCAM_Nature_Communications

    Code made available for reproducibility of HistoCAM Nature Communications publication

    histopathology/HistoCAM_Nature_Communications's past year of commit activity
    C++ 0 1 0 0 Updated Aug 20, 2026

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