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remove uncertainty field from image registration regression test this was causing test errors on windows for the 0th step
fix issue with output movies for tracking not being readable on windows on windows the user now selects which codec to use when the video is created
refactor how shape functions are selected in the input file there used to be a flag quadratic_shape_function_enabled now the user sets shape_function_type to one of the types available
fix bug for model coordinates not being populated on the first step there was an assumption made that the user would always self-correlate the reference image, which isn't always true. This commit removes this assumption.
fixed bug related to ':' in path name for windows as well as openCV c… …ommands there was a test in OpenCVServer that checked for ':' to indicate an openCVServer command, on windows the file paths had this char so the test would get tripped up.
compute uncertainty for stereo as well For stereo, the uncertainty is calculated as sqrt(2*noise^2*max_m) where max_m is the max eigenvalue of the pseudo-inverse in the triangulation routine.
added missing diceutils library to tools for windows builds
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