BIFO
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RiboDetector
RiboDetector PublicAccurate and rapid RiboRNA sequences Detector based on deep learning
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traitar
traitar PublicForked from aweimann/traitar
From genomes to phenotypes: Traitar, the microbial trait analyzer
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Repositories
- seq2geno2pheno Public
- seminar-plotting Public
- seminar-dlmb-2025-winter-public Public archive
Materials for the "Seminar: Deep Learning for Molecular Biology" on 2025W at TU Braunschweig (https://www.helmholtz-hzi.de/en/research/research-topics/bacterial-and-viral-pathogens/computational-biology-of-infection-research/workshop/seminar-deep-learning-for-molecular-biology/)
- SeqDesk Public
Self-hosted web platform for sequencing facilities: orders, samples, MIxS metadata, sequencing files, bioinformatics pipelines, and ENA submission.
- stecher-science Public
Code, data and documentation for the Stecher study, organized by contributing analysis.
8000 poll-include-fragment>hzi-bifo/stecher-science's past year of commit activity - slurm_gpu_idle_killer Public
- Metax Public
Metax: Accurate Cross-Domain Taxon Profiling via a Probabilistic Model of Genome Coverage
- covid-germany-mcmc Public
SARS-CoV-2 lineage importations and spread are reduced after nonpharmaceutical interventions in phylogeographic analyses
- seqdesk-pipeline-template Public template
Starter template for building a SeqDesk pipeline package (Nextflow) for the official pipeline store — see https://seqdesk.org/docs/pipelines/adding-pipelines
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