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================== HMMvar-func README ================== For detailed input and installation, please refer the README file in HMMvar package. Output ===== The output are the confidence scores of the four types and the corresponding predicted type for each input variant. It generates the ouput file 'classification_results.txt'. For example, the results may look like as follows. VID LoF SoF CoF GoF Prediction 1 0.000526497 0.031769 0.015776 0.951929 GoF 2 0.000216149 0.0320793 0.0064767 0.961228 GoF 3 0.000858227 0.034713 0.0232688 0.94116 GoF 4 0.00047879 0.0214025 0.0214025 0.956716 GoF 5 0.000145588 0.0291666 0.00482121 0.965867 GoF 6 0.000578636 0.0141954 0.0385871 0.946639 GoF