| Integrated proteogenomic characterization of human high-grade serous ovarian cancer H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ... Cell 166 (3), 755-765, 2016 | 1118 | 2016 |
| Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ... Cell 177 (4), 1035-1049. e19, 2019 | 784 | 2019 |
| Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ... Cell 182 (1), 200-225. e35, 2020 | 756 | 2020 |
| Integrated proteogenomic characterization of clear cell renal cell carcinoma DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ... Cell 179 (4), 964-983. e31, 2019 | 730 | 2019 |
| A multidimensional chromatography technology for in-depth phosphoproteome analysis CP Albuquerque, MB Smolka, SH Payne, V Bafna, J Eng, H Zhou Molecular & Cellular Proteomics 7 (7), 1389-1396, 2008 | 688 | 2008 |
| Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 651 | 2021 |
| Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 540 | 2020 |
| Proteogenomic characterization of pancreatic ductal adenocarcinoma L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage, K Krug, DJ Clark, ... Cell 184 (19), 5031-5052. e26, 2021 | 539 | 2021 |
| Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 468 | 2020 |
| A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 378 | 2021 |
| OpenPiton: An open source manycore research framework J Balkind, M McKeown, Y Fu, T Nguyen, Y Zhou, A Lavrov, M Shahrad, ... ACM SIGPLAN Notices 51 (4), 217-232, 2016 | 345 | 2016 |
| Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 342 | 2021 |
| Discovery and revision of Arabidopsis genes by proteogenomics NE Castellana, SH Payne, Z Shen, M Stanke, V Bafna, SP Briggs Proceedings of the national academy of sciences 105 (52), 21034-21038, 2008 | 333 | 2008 |
| Systematic analysis of splice-site-creating mutations in cancer RG Jayasinghe, S Cao, Q Gao, MC Wendl, NS Vo, SM Reynolds, Y Zhao, ... Cell reports 23 (1), 270-281. e3, 2018 | 276 | 2018 |
| The utility of protein and mRNA correlation SH Payne Trends in biochemical sciences 40 (1), 1-3, 2015 | 268 | 2015 |
| Identification and quantification of proteoforms by mass spectrometry LV Schaffer, RJ Millikin, RM Miller, LC Anderson, RT Fellers, Y Ge, ... Proteomics 19 (10), 1800361, 2019 | 254 | 2019 |
| PECAN: library-free peptide detection for data-independent acquisition tandem mass spectrometry data YS Ting, JD Egertson, JG Bollinger, BC Searle, SH Payne, WS Noble, ... Nature methods 14 (9), 903-908, 2017 | 234 | 2017 |
| A structural examination and collision cross section database for over 500 metabolites and xenobiotics using drift tube ion mobility spectrometry X Zheng, NA Aly, Y Zhou, KT Dupuis, A Bilbao, VL Paurus, DJ Orton, ... Chemical science 8 (11), 7724-7736, 2017 | 232 | 2017 |
| Peptide-centric proteome analysis: an alternative strategy for the analysis of tandem mass spectrometry data YS Ting, JD Egertson, SH Payne, S Kim, B MacLean, L Käll, R Aebersold, ... Molecular & Cellular Proteomics 14 (9), 2301-2307, 2015 | 212 | 2015 |
| Proteogenomic data and resources for pan-cancer analysis Y Li, Y Dou, FDV Leprevost, Y Geffen, AP Calinawan, F Aguet, Y Akiyama, ... Cancer cell 41 (8), 1397-1406, 2023 | 205 | 2023 |
Richard D SmithChief Scientist and Battelle Fellow, Biological Sciences Division, PNNL; retired 2/2024Verified email at pnnl.gov
