| Transforming clinical microbiology with bacterial genome sequencing X Didelot, R Bowden, DJ Wilson, TEA Peto, DW Crook Nature Reviews Genetics 13 (9), 601-612, 2012 | 985 | 2012 |
| ClonalFrameML: efficient inference of recombination in whole bacterial genomes X Didelot, DJ Wilson PLoS computational biology 11 (2), e1004041, 2015 | 951 | 2015 |
| Multilocus sequence typing as a replacement for serotyping in Salmonella enterica M Achtman, J Wain, FX Weill, S Nair, Z Zhou, V Sangal, MG Krauland, ... PLoS Pathogens 8 (6), e1002776, 2012 | 867 | 2012 |
| Diverse Sources of C. difficile Infection Identified on Whole-Genome Sequencing DW Eyre, ML Cule, DJ Wilson, D Griffiths, A Vaughan, L O'Connor, CLC Ip, ... New England Journal of Medicine 369 (13), 1195-1205, 2013 | 791 | 2013 |
| Inference of bacterial microevolution using multilocus sequence data X Didelot, D Falush Genetics 175 (3), 1251-1266, 2007 | 781 | 2007 |
| The global distribution and spread of the mobilized colistin resistance gene mcr-1 R Wang, L Van Dorp, LP Shaw, P Bradley, Q Wang, X Wang, L Jin, ... Nature communications 9 (1), 1179, 2018 | 726 | 2018 |
| A comparison of homologous recombination rates in bacteria and archaea M Vos, X Didelot The ISME journal 3 (2), 199-208, 2008 | 609 | 2008 |
| Within-host evolution of bacterial pathogens X Didelot, AS Walker, TE Peto, DW Crook, DJ Wilson Nature Reviews Microbiology 14 (3), 150-162, 2016 | 538 | 2016 |
| Impact of recombination on bacterial evolution X Didelot, MCJ Maiden Trends in microbiology 18 (7), 315-322, 2010 | 458 | 2010 |
| Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter SK Sheppard, X Didelot, G Meric, A Torralbo, KA Jolley, DJ Kelly, ... Proceedings of the national academy of sciences 110 (29), 11923-11927, 2013 | 375 | 2013 |
| Effects of control interventions on Clostridium difficile infection in England: an observational study KE Dingle, X Didelot, TP Quan, DW Eyre, N Stoesser, T Golubchik, ... The Lancet Infectious Diseases 17 (4), 411-421, 2017 | 372* | 2017 |
| Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131 N Stoesser, AE Sheppard, L Pankhurst, N De Maio, CE Moore, R Sebra, ... MBio 7 (2), 10.1128/mbio. 02162-15, 2016 | 365* | 2016 |
| Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease BC Young, T Golubchik, EM Batty, R Fung, H Larner-Svensson, ... Proceedings of the National Academy of Sciences, 2012 | 354 | 2012 |
| Helicobacter pylori genome evolution during human infection L Kennemann, X Didelot, T Aebischer, S Kuhn, B Drescher, M Droege, ... Proceedings of the National Academy of Sciences 108 (12), 5033, 2011 | 328 | 2011 |
| Genomic infectious disease epidemiology in partially sampled and ongoing outbreaks X Didelot, C Fraser, J Gardy, C Colijn Molecular biology and evolution 34 (4), 997-1007, 2017 | 316 | 2017 |
| Emergence of methicillin resistance predates the clinical use of antibiotics J Larsen, CL Raisen, X Ba, NJ Sadgrove, GF Padilla-González, ... Nature 602 (7895), 135-141, 2022 | 313 | 2022 |
| A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance DW Eyre, T Golubchik, NC Gordon, R Bowden, P Piazza, EM Batty, ... BMJ open 2 (3), e001124, 2012 | 308 | 2012 |
| Bayesian inference of ancestral dates on bacterial phylogenetic trees X Didelot, NJ Croucher, SD Bentley, SR Harris, DJ Wilson Nucleic acids research 46 (22), e134-e134, 2018 | 300 | 2018 |
| Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data T Jombart, A Cori, X Didelot, S Cauchemez, C Fraser, N Ferguson PLoS computational biology 10 (1), e1003457, 2014 | 297 | 2014 |
| Measurably evolving pathogens in the genomic era R Biek, OG Pybus, JO Lloyd-Smith, X Didelot Trends in ecology & evolution 30 (6), 306-313, 2015 | 281 | 2015 |
Daniel FalushShanghai Institute of Immunity and InfectionVerified email at ips.ac.cn
