| An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17 (1), 184, 2016 | 486 | 2016 |
| Comprehensive large-scale assessment of intrinsic protein disorder I Walsh, M Giollo, T Di Domenico, C Ferrari, O Zimmermann, SCE Tosatto Bioinformatics 31 (2), 201-208, 2015 | 172 | 2015 |
| NeEMO: a method using residue interaction networks to improve prediction of protein stability upon mutation M Giollo, AJM Martin, I Walsh, C Ferrari, SCE Tosatto BMC genomics 15 (Suppl 4), S7, 2014 | 138 | 2014 |
| INGA: protein function prediction combining interaction networks, domain assignments and sequence similarity D Piovesan, M Giollo, E Leonardi, C Ferrari, SCE Tosatto Nucleic acids research 43 (W1), W134-W140, 2015 | 100 | 2015 |
| RepeatsDB: a database of tandem repeat protein structures T Di Domenico, E Potenza, I Walsh, R Gonzalo Parra, M Giollo, ... Nucleic acids research 42 (D1), D352-D357, 2014 | 80 | 2014 |
| CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods Genome biology 25 (1), 53, 2024 | 56 | 2024 |
| Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges R Daneshjou, Y Wang, Y Bromberg, S Bovo, PL Martelli, G Babbi, ... Human mutation 38 (9), 1182-1192, 2017 | 51 | 2017 |
| BOOGIE: predicting blood groups from high throughput sequencing data M Giollo, G Minervini, M Scalzotto, E Leonardi, C Ferrari, SCE Tosatto PLoS One 10 (4), e0124579, 2015 | 47 | 2015 |
| Amazon Nova Sonic: Technical report and model card AAG Intelligence Amazon Technical Reports, 2025 | 46* | 2025 |
| Protein function prediction using guilty by association from interaction networks D Piovesan, M Giollo, C Ferrari, SCE Tosatto Amino Acids 47 (12), 2583-2592, 2015 | 40 | 2015 |
| Improved robustness to disfluencies in rnn-transducer based speech recognition V Mendelev, T Raissi, G Camporese, M Giollo ICASSP 2021-2021 IEEE International Conference on Acoustics, Speech and …, 2021 | 33 | 2021 |
| Design and analysis of a Petri net model of the Von Hippel-Lindau (VHL) tumor suppressor interaction network G Minervini, E Panizzoni, M Giollo, A Masiero, C Ferrari, SCE Tosatto PloS one 9 (6), e96986, 2014 | 25 | 2014 |
| Exploring subgroup performance in end-to-end speech models A Koudounas, E Pastor, G Attanasio, V Mazzia, M Giollo, T Gueudre, ... ICASSP 2023-2023 IEEE International Conference on Acoustics, Speech and …, 2023 | 19 | 2023 |
| Towards comprehensive subgroup performance analysis in speech models A Koudounas, E Pastor, G Attanasio, V Mazzia, M Giollo, T Gueudre, ... IEEE/ACM Transactions on Audio, Speech, and Language Processing 32, 1468-1480, 2024 | 18 | 2024 |
| Bootstrap an end-to-end ASR system by multilingual training, transfer learning, text-to-text mapping and synthetic audio M Giollo, D Gunceler, Y Liu, D Willett arXiv preprint arXiv:2011.12696, 2020 | 18 | 2020 |
| Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges B Cai, B Li, N Kiga, J Thusberg, T Bergquist, YC Chen, N Niknafs, ... Human mutation 38 (9), 1266-1276, 2017 | 18 | 2017 |
| Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI M Carraro, G Minervini, M Giollo, Y Bromberg, E Capriotti, R Casadio, ... Human mutation 38 (9), 1042-1050, 2017 | 17 | 2017 |
| Crohn disease risk prediction—Best practices and pitfalls with exome data M Giollo, DT Jones, M Carraro, E Leonardi, C Ferrari, SCE Tosatto Human mutation 38 (9), 1193-1200, 2017 | 15 | 2017 |
| Towards big data visualization for monitoring and diagnostics of high volume semiconductor manufacturing D Gkorou, A Ypma, G Tsirogiannis, M Giollo, D Sonntag, G Vinken, ... Proceedings of the Computing Frontiers Conference, 338-342, 2017 | 15 | 2017 |
| The Victor C++ library for protein representation and advanced manipulation L Hirsh, D Piovesan, M Giollo, C Ferrari, SCE Tosatto Bioinformatics 31 (7), 1138-1140, 2015 | 11 | 2015 |
Silvio TosattoFull Professor of Bioinformatics, Department of Biomedical Sciences, University of PaduaVerified email at unipd.it
