| Model-based evaluation of clustering validation measures M Brun, C Sima, J Hua, J Lowey, B Carroll, E Suh, ER Dougherty Pattern Recognition 40 (3), 807-824, 2007 | 344 | 2007 |
| Inference from clustering with application to gene-expression microarrays ER Dougherty, J Barrera, M Brun, S Kim, RM Cesar, Y Chen, M Bittner, ... Journal of Computational Biology 9 (1), 105-126, 2002 | 223 | 2002 |
| Identification of the genetic basis for complex disorders by use of pooling-based genomewide single-nucleotide–polymorphism association studies JV Pearson, MJ Huentelman, RF Halperin, WD Tembe, S Melquist, ... The American Journal of Human Genetics 80 (1), 126-139, 2007 | 187 | 2007 |
| Steady-state probabilities for attractors in probabilistic Boolean networks M Brun, ER Dougherty, I Shmulevich Signal Processing 85 (10), 1993-2013, 2005 | 131 | 2005 |
| Clustering algorithms: on learning, validation, performance, and applications to genomics L Dalton, V Ballarin, M Brun Current genomics 10 (6), 430-445, 2009 | 122 | 2009 |
| Three methods for optimization of cross-laboratory and cross-platform microarray expression data P Stafford, M Brun Nucleic acids research 35 (10), e72, 2007 | 71 | 2007 |
| A probabilistic theory of clustering ER Dougherty, M Brun Pattern Recognition 37 (5), 917-925, 2004 | 67 | 2004 |
| Unraveling gene-gene interactions regulated by ligands of the aryl hydrocarbon receptor. CD Johnson, Y Balagurunathan, MG Tadesse, MH Falahatpisheh, M Brun, ... Environmental health perspectives 112 (4), 403-412, 2004 | 66 | 2004 |
| Conditioning-based modeling of contextual genomic regulation ER Dougherty, M Brun, JM Trent, ML Bittner IEEE/ACM Transactions on Computational Biology and Bioinformatics 6 (2), 310-320, 2008 | 60 | 2008 |
| Analysis of genetic association using hierarchical clustering and cluster validation indices IA Pagnuco, JI Pastore, G Abras, M Brun, VL Ballarin Genomics 109 (5-6), 438-445, 2017 | 57 | 2017 |
| SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays J Hua, DW Craig, M Brun, J Webster, V Zismann, W Tembe, K Joshipura, ... Bioinformatics 23 (1), 57-63, 2007 | 56 | 2007 |
| Multiresolution analysis for optimal binary filters ER Dougherty, J Barrera, G Mozelle, S Kim, M Brun Journal of Mathematical Imaging and Vision 14 (1), 53-72, 2001 | 55 | 2001 |
| ARITHMETIC MEAN BASED COMPENSATORY FUZZY LOGIC A BOUCHET, JI PASTORE, RE ANDRADE, M BRUN, V BALLARIN International Journal of Computational Intelligence and Applications 10 (02 …, 2011 | 41 | 2011 |
| Differential expression of IGFBP-5 and two human ESTs in thyroid glands with goiter, adenoma and papillary or follicular carcinomas BS Stolf, AF Carvalho, WK Martins, FB Runza, M Brun, R Hirata, ... Cancer letters 191 (2), 193-202, 2003 | 36 | 2003 |
| Multiresolution design of aperture operators R Hirata Junior, M Brun, J Barrera, ER Dougherty Journal of Mathematical Imaging and Vision 16 (3), 199-222, 2002 | 35 | 2002 |
| The coefficient of intrinsic dependence (feature selection using el CID) T Hsing, LY Liu, M Brun, ER Dougherty Pattern Recognition 38 (5), 623-636, 2005 | 33 | 2005 |
| Computational and biological inference of gene regulatory networks of the LINE-1 retrotransposon KS Ramos, Q He, T Kalbfleisch, DE Montoya-Durango, I Teneng, ... Genomics 90 (2), 176-185, 2007 | 28 | 2007 |
| On the number of close-to-optimal feature sets ER Dougherty, M Brun Cancer informatics 2, 189, 2006 | 28 | 2006 |
| Evaluation of speckle-interferometry descriptors to measuring drying-of-coatings E Blotta, V Ballarín, M Brun, H Rabal Signal Processing 91 (10), 2395-2403, 2011 | 27 | 2011 |
| Genetic test bed for feature selection A Choudhary, M Brun, J Hua, J Lowey, E Suh, ER Dougherty Bioinformatics 22 (7), 837-842, 2006 | 27 | 2006 |
