| SIMDRAM: a framework for bit-serial SIMD processing using DRAM N Hajinazar, GF Oliveira, S Gregorio, JD Ferreira, NM Ghiasi, M Patel, ... Proceedings of the 26th ACM International Conference on Architectural …, 2021 | 219 | 2021 |
| SMASH: Co-designing Software Compression and Hardware-Accelerated Indexing for Efficient Sparse Matrix Operations K Kanellopoulos, N Vijaykumar, C Giannoula, R Azizi, S Koppula, ... Proceedings of the 52nd Annual IEEE/ACM International Symposium on …, 2019 | 135 | 2019 |
| FLIN: enabling fairness and enhancing performance in modern NVMe solid state drives A Tavakkol, M Sadrosadati, S Ghose, J Kim, Y Luo, Y Wang, NM Ghiasi, ... 2018 ACM/IEEE 45th Annual International Symposium on Computer Architecture …, 2018 | 125 | 2018 |
| CROW: A low-cost substrate for improving DRAM performance, energy efficiency, and reliability H Hassan, M Patel, JS Kim, AG Yaglikci, N Vijaykumar, NM Ghiasi, ... Proceedings of the 46th International Symposium on Computer Architecture …, 2019 | 121 | 2019 |
| FIGARO: Improving system performance via fine-grained In-DRAM data relocation and caching Y Wang, L Orosa, X Peng, Y Guo, S Ghose, M Patel, JS Kim, JG Luna, ... 2020 53rd Annual IEEE/ACM International Symposium on Microarchitecture …, 2020 | 104 | 2020 |
| GenStore: a high-performance in-storage processing system for genome sequence analysis N Mansouri Ghiasi, J Park, H Mustafa, J Kim, A Olgun, A Gollwitzer, ... Proceedings of the 27th ACM International Conference on Architectural …, 2022 | 95 | 2022 |
| SeGraM: A universal hardware accelerator for genomic sequence-to-graph and sequence-to-sequence mapping DS Cali, K Kanellopoulos, J Lindegger, Z Bingöl, GS Kalsi, Z Zuo, ... Proceedings of the 49th Annual International Symposium on Computer …, 2022 | 69 | 2022 |
| Reducing DRAM latency via charge-level-aware look-ahead partial restoration Y Wang, A Tavakkol, L Orosa, S Ghose, NM Ghiasi, M Patel, JS Kim, ... 2018 51st Annual IEEE/ACM International Symposium on Microarchitecture …, 2018 | 66 | 2018 |
| Codic: A low-cost substrate for enabling custom in-dram functionalities and optimizations L Orosa, Y Wang, M Sadrosadati, JS Kim, M Patel, I Puddu, H Luo, ... 2021 ACM/IEEE 48th Annual International Symposium on Computer Architecture …, 2021 | 51 | 2021 |
| BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysis C Firtina, J Park, M Alser, JS Kim, DS Cali, T Shahroodi, NM Ghiasi, ... NAR Genomics and Bioinformatics 5 (1), lqad004, 2023 | 47* | 2023 |
| GenStore: A High-Performance and Energy-Efficient In-Storage Computing System for Genome Sequence Analysis NM Ghiasi, J Park, H Mustafa, J Kim, A Olgun, A Gollwitzer, DS Cali, ... arXiv preprint arXiv:2202.10400, 2022 | 39 | 2022 |
| RawHash: enabling fast and accurate real-time analysis of raw nanopore signals for large genomes C Firtina, N Mansouri Ghiasi, J Lindegger, G Singh, MB Cavlak, H Mao, ... Bioinformatics 39 (Supplement_1), i297-i307, 2023 | 34 | 2023 |
| Analysis of metagenomic data S Liu, JS Rodriguez, V Munteanu, C Ronkowski, NK Sharma, M Alser, ... Nature Reviews Methods Primers 5 (1), 5, 2025 | 32 | 2025 |
| Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs J Lindegger, D Senol Cali, M Alser, J Gómez-Luna, NM Ghiasi, O Mutlu Bioinformatics 39 (5), btad151, 2023 | 23 | 2023 |
| SIMDRAM: An End-to-End Framework for Bit-Serial SIMD Computing in DRAM N Hajinazar, GF Oliveira, S Gregorio, J Ferreira, NM Ghiasi, M Patel, ... arXiv preprint arXiv:2105.12839, 2021 | 23 | 2021 |
| Venice: Improving Solid-State Drive Parallelism at Low Cost via Conflict-Free Accesses R Nadig, M Sadrosadati, H Mao, NM Ghiasi, A Tavakkol, J Park, ... Proceedings of the 50th Annual International Symposium on Computer …, 2023 | 22 | 2023 |
| Flin: Enabling fairness and enhancing performance in modern nvme solid state drives. In 2018 ACM/IEEE 45th Annual International Symposium on Computer Architecture (ISCA) A Tavakkol, M Sadrosadati, S Ghose, J Kim, Y Luo, Y Wang, NM Ghiasi, ... IEEE 10, 397-410, 2018 | 19 | 2018 |
| MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing NM Ghiasi, M Sadrosadati, H Mustafa, A Gollwitzer, C Firtina, J Eudine, ... 2024 ACM/IEEE 51st Annual International Symposium on Computer Architecture …, 2024 | 18* | 2024 |
| Dataplant: In-DRAM Security Mechanisms for Low-Cost Devices L Orosa, Y Wang, I Puddu, M Sadrosadati, K Razavi, J Gómez-Luna, ... arXiv preprint arXiv:1902.07344, 2019 | 18* | 2019 |
| ALP: Alleviating CPU-Memory Data Movement Overheads in Memory-Centric Systems NM Ghiasi, N Vijaykumar, GF Oliveira, L Orosa, I Fernandez, ... IEEE Transactions on Emerging Topics in Computing, 2022 | 16 | 2022 |
