| Plant dicer-like proteins: double-stranded RNA-cleaving enzymes for small RNA biogenesis A Fukudome, T Fukuhara Journal of Plant Research 130 (1), 33-44, 2017 | 172 | 2017 |
| Specific requirement of DRB4, a dsRNA-binding protein, for the in vitro dsRNA-cleaving activity of Arabidopsis Dicer-like 4 A Fukudome, A Kanaya, M Egami, Y Nakazawa, A Hiraguri, H Moriyama, ... RNA 17 (4), 750-760, 2011 | 102 | 2011 |
| Distinct substrate specificities of Arabidopsis DCL3 and DCL4 H Nagano, A Fukudome, A Hiraguri, H Moriyama, T Fukuhara Nucleic acids research 42 (3), 1845-1856, 2014 | 101 | 2014 |
| Purification and characterization of Arabidopsis thaliana oligosaccharyltransferase complexes from the native host: a protein super‐expression system for structural … IS Jeong, S Lee, F Bonkhofer, J Tolley, A Fukudome, Y Nagashima, ... The Plant Journal 94 (1), 131-145, 2018 | 59 | 2018 |
| A DCL3 dicing code within Pol IV-RDR2 transcripts diversifies the siRNA pool guiding RNA-directed DNA methylation A Loffer, J Singh, A Fukudome, V Mishra, F Wang, CS Pikaard Elife 11, e73260, 2022 | 41 | 2022 |
| Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2 A Fukudome, J Singh, V Mishra, E Reddem, F Martinez-Marquez, ... Proceedings of the National Academy of Sciences 118 (51), e2115899118, 2021 | 40 | 2021 |
| Regulation of abiotic stress signalling by Arabidopsis C-terminal domain phosphatase-like 1 requires interaction with a k-homology domain-containing protein IS Jeong, A Fukudome, E Aksoy, WY Bang, S Kim, Q Guan, JD Bahk, ... PLoS One 8 (11), e80509, 2013 | 39 | 2013 |
| Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan S Urayama, A Fukudome, M Hirai, T Okumura, Y Nishimura, Y Takaki, ... Nature Microbiology 9 (2), 514-523, 2024 | 34 | 2024 |
| Arabidopsis C-terminal domain phosphatase-like 1 functions in miRNA accumulation and DNA methylation IS Jeong, E Aksoy, A Fukudome, S Akhter, A Hiraguri, T Fukuhara, ... PLoS One 8 (9), e74739, 2013 | 31 | 2013 |
| Arabidopsis CPL4 is an essential C‐terminal domain phosphatase that suppresses xenobiotic stress responses A Fukudome, E Aksoy, X Wu, K Kumar, IS Jeong, K May, WK Russell, ... The Plant Journal 80 (1), 27-39, 2014 | 29 | 2014 |
| Post-translational regulation of the dicing activities of Arabidopsis DICER-LIKE 3 and 4 by inorganic phosphate and the redox state A Seta, M Tabara, Y Nishibori, A Hiraguri, N Ohkama-Ohtsu, T Yokoyama, ... Plant and Cell Physiology 58 (3), 485-495, 2017 | 28 | 2017 |
| Assembly of a dsRNA synthesizing complex: RNA-DEPENDENT RNA POLYMERASE 2 contacts the largest subunit of NUCLEAR RNA POLYMERASE IV V Mishra, J Singh, F Wang, Y Zhang, A Fukudome, JC Trinidad, Y Takagi, ... Proceedings of the National Academy of Sciences 118 (13), e2019276118, 2021 | 20 | 2021 |
| Salt stress and CTD PHOSPHATASE-LIKE4 mediate the switch between production of small nuclear RNAs and mRNAs A Fukudome, D Sun, X Zhang, H Koiwa The Plant Cell 29 (12), 3214-3233, 2017 | 16 | 2017 |
| Double-stranded RNA-binding protein DRB3 negatively regulates anthocyanin biosynthesis by modulating PAP1 expression in Arabidopsis thaliana H Sawano, T Matsuzaki, T Usui, M Tabara, A Fukudome, A Kanaya, ... Journal of plant research 130 (1), 45-55, 2017 | 16 | 2017 |
| Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Bacterial Viruses Subcommittee, 2025 D Turner, EM Adriaenssens, RI Amann, P Bardy, N Bartlau, J Barylski, ... Journal of General Virology 106 (7), 002111, 2025 | 12 | 2025 |
| Improved recombinant protein production in Arabidopsis thaliana A Von Schaewen, IS Jeong, S Rips, A Fukudome, J Tolley, Y Nagashima, ... Plant Signaling & Behavior 13 (6), e1486149, 2018 | 10 | 2018 |
| Silencing Arabidopsis CARBOXYL‐TERMINAL DOMAIN PHOSPHATASE‐LIKE 4 induces cytokinin‐oversensitive de novo shoot organogenesis A Fukudome, JS Goldman, SA Finlayson, H Koiwa The Plant Journal 94 (5), 799-812, 2018 | 8 | 2018 |
| Cytokinin-overinduced transcription factors and thalianol cluster genes in CARBOXYL-TERMINAL DOMAIN PHOSPHATASE-LIKE 4-silenced Arabidopsis roots during de novo shoot organogenesis A Fukudome, H Koiwa Plant Signaling & Behavior 13 (9), e1513299, 2018 | 6 | 2018 |
| The coding sequence of firefly luciferase reporter gene affects specific hyperexpression in Arabidopsis thaliana cpl1 mutant H Koiwa, A Fukudome Plant signaling & behavior 12 (8), e1346767, 2017 | 2 | 2017 |
| “Paraxenoviridae”, a putative family of globally distributed marine bacteriophages with double-stranded RNA genomes M Yoshida, S Medvedeva, A Fukudome, YI Wolf, S Urayama, Y Nishimura, ... The ISME Journal, wraf139, 2025 | 1 | 2025 |
