| Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity JP Shaffer, LF Nothias, LR Thompson, JG Sanders, RA Salido, ... Nature microbiology 7 (12), 2128-2150, 2022 | 169 | 2022 |
| Harnessing the power of smart and connected health to tackle covid-19: Iot, ai, robotics, and blockchain for a better world F Firouzi, B Farahani, M Daneshmand, K Grise, J Song, R Saracco, ... IEEE Internet of Things Journal 8 (16), 12826-12846, 2021 | 167 | 2021 |
| Comparative Proteomics of Human and Macaque Milk Reveals Species-Specific Nutrition during Postnatal Development KL Beck, D Weber, BS Phinney, JT Smilowitz, K Hinde, B Lönnerdal, ... Journal of proteome research 14 (5), 2143-2157, 2015 | 124 | 2015 |
| Microbiome metadata standards: report of the national microbiome data collaborative’s workshop and follow-on activities P Vangay, J Burgin, A Johnston, KL Beck, DC Berrios, K Blumberg, ... MSystems 6 (1), 10.1128/msystems. 01194-20, 2021 | 68 | 2021 |
| Key roles for GRB2-associated-binding protein 1, phosphatidylinositol-3-kinase, cyclooxygenase 2, prostaglandin E2 and transforming growth factor alpha in linoleic acid-induced … M Mouradian, KD Kikawa, ED Johnson, KL Beck, RS Pardini Prostaglandins, Leukotrienes and Essential Fatty Acids (PLEFA) 90 (4), 105-115, 2014 | 66 | 2014 |
| SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment C Marotz, P Belda-Ferre, F Ali, P Das, S Huang, K Cantrell, L Jiang, ... Microbiome 9 (1), 132, 2021 | 63 | 2021 |
| EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets K Cantrell, MW Fedarko, G Rahman, D McDonald, Y Yang, T Zaw, ... mSystems 6 (2), 2021 | 54 | 2021 |
| Efficient computation of Faith's phylogenetic diversity with applications in characterizing microbiomes G Armstrong, K Cantrell, S Huang, D McDonald, N Haiminen, AP Carrieri, ... Genome research 31 (11), 2131-2137, 2021 | 50 | 2021 |
| Monitoring the microbiome for food safety and quality using deep shotgun sequencing KL Beck, N Haiminen, D Chambliss, S Edlund, M Kunitomi, BC Huang, ... npj Science of Food 5 (1), 1-12, 2021 | 47 | 2021 |
| Food authentication from shotgun sequencing reads with an application on high protein powders N Haiminen, S Edlund, D Chambliss, M Kunitomi, BC Weimer, B Ganesan, ... NPJ science of food 3 (1), 1-11, 2019 | 41 | 2019 |
| DNA extraction and host depletion methods significantly impact and potentially bias bacterial detection in a biological fluid E Ganda, KL Beck, N Haiminen, JD Silverman, B Kawas, BD Cronk, ... Msystems 6 (3), 10.1128/msystems. 00619-21, 2021 | 40 | 2021 |
| IBM Functional Genomics Platform, A Cloud-Based Platform for Studying Microbial Life at Scale E Seabolt, G Nayar, H Krishnareddy, A Agarwal, KL Beck, E Kandogan, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2020 | 27 | 2020 |
| Fusing modalities by multiplexed graph neural networks for outcome prediction from medical data and beyond NS D‘Souza, H Wang, A Giovannini, A Foncubierta-Rodriguez, KL Beck, ... Medical Image Analysis 93, 103064, 2024 | 26 | 2024 |
| Analysis and forecasting of global real time RT-PCR primers and probes for SARS-CoV-2 G Nayar, EE Seabolt, M Kunitomi, A Agarwal, KL Beck, V Mukherjee, ... Scientific Reports 11 (1), 8988, 2021 | 24 | 2021 |
| Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity. Nat. Microbiol. 7, 2128–2150 JP Shaffer, LF Nothias, LR Thompson, JG Sanders, RA Salido, ... | 22 | 2022 |
| Microbiome metadata standards: report of the national microbiome data collaborati ve’s workshop and follow-on activities. mSystems 6: e01194-20 P Vangay, J Burgin, A Johnston, KL Beck, DC Berrios, K Blumberg, ... PubMed PubMed Central, 2021 | 18 | 2021 |
| SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment. Microbiome 9: 132 C Marotz, P Belda-Ferre, F Ali, P Das, S Huang, K Cantrell, L Jiang, ... | 18 | 2021 |
| Fusing Modalities by Multiplexed Graph Neural Networks for Outcome Prediction in Tuberculosis NS D’Souza, H Wang, A Giovannini, A Foncubierta-Rodriguez, KL Beck, ... International Conference on Medical Image Computing and Computer-Assisted …, 2022 | 13 | 2022 |
| Design of the MCAW compute service for food safety bioinformatics SB Edlund, KL Beck, N Haiminen, LP Parida, DB Storey, BC Weimer, ... IBM Journal of Research and Development 60 (5/6), 2: 1-2: 12, 2016 | 13 | 2016 |
| Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment C Marotz, P Belda-Ferre, F Ali, P Das, S Huang, K Cantrell, L Jiang, ... medRxiv, 2020 | 12 | 2020 |
Niina HaiminenDAIN StudiosVerified email at dainstudios.com
