| Evaluation of the Infinium Methylation 450K technology S Dedeurwaerder, M Defrance, E Calonne, H Denis, C Sotiriou, F Fuks Epigenomics 3 (6), 771-784, 2011 | 736 | 2011 |
| TET2 and TET3 regulate GlcNAcylation and H3K4 methylation through OGT and SET1/COMPASS R Deplus, B Delatte, MK Schwinn, M Defrance, J Méndez, N Murphy, ... The EMBO journal 32 (5), 645-655, 2013 | 566 | 2013 |
| DNA methylation profiling identifies epigenetic dysregulation in pancreatic islets from type 2 diabetic patients M Volkmar, S Dedeurwaerder, DA Cunha, MN Ndlovu, M Defrance, ... The EMBO journal 31 (6), 1405, 2012 | 512 | 2012 |
| Transcriptome-wide distribution and function of RNA hydroxymethylcytosine B Delatte, F Wang, LV Ngoc, E Collignon, E Bonvin, R Deplus, E Calonne, ... Science 351 (6270), 282-285, 2016 | 456 | 2016 |
| RSAT: regulatory sequence analysis tools M Thomas-Chollier, O Sand, JV Turatsinze, M Defrance, E Vervisch, ... Nucleic acids research 36 (suppl 2), W119-W127, 2008 | 347 | 2008 |
| Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules JV Turatsinze, M Thomas-Chollier, M Defrance, J van Helden Nature protocols 3 (10), 1578-1588, 2008 | 331 | 2008 |
| RSAT 2011: regulatory sequence analysis tools M Thomas-Chollier, M Defrance, A Medina-Rivera, O Sand, C Herrmann, ... Nucleic acids research 39 (suppl_2), W86-W91, 2011 | 303 | 2011 |
| RSAT 2015: regulatory sequence analysis tools A Medina-Rivera, M Defrance, O Sand, C Herrmann, ... Nucleic acids research 43 (W1), W50-W56, 2015 | 295 | 2015 |
| RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets M Thomas-Chollier, C Herrmann, M Defrance, O Sand, D Thieffry, ... Nucleic acids research 40 (4), e31-e31, 2012 | 290 | 2012 |
| A comprehensive overview of Infinium HumanMethylation450 data processing S Dedeurwaerder, M Defrance, M Bizet, E Calonne, G Bontempi, F Fuks Briefings in bioinformatics 15 (6), 929-941, 2014 | 288 | 2014 |
| DNA methylation profiling reveals a predominant immune component in breast cancers S Dedeurwaerder, C Desmedt, E Calonne, SK Singhal, B Haibe‐Kains, ... EMBO molecular medicine 3 (12), 726-741, 2011 | 264 | 2011 |
| DNA methylation–based immune response signature improves patient diagnosis in multiple cancers J Jeschke, M Bizet, C Desmedt, E Calonne, S Dedeurwaerder, S Garaud, ... The Journal of clinical investigation 127 (8), 3090-3102, 2017 | 165 | 2017 |
| Sox9 controls self-renewal of oncogene targeted cells and links tumor initiation and invasion JC Larsimont, KK Youssef, A Sanchez-Danes, V Sukumaran, M Defrance, ... Cell stem cell 17 (1), 60-73, 2015 | 164 | 2015 |
| A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs M Thomas-Chollier, E Darbo, C Herrmann, M Defrance, D Thieffry, ... Nature protocols 7 (8), 1551-1568, 2012 | 138 | 2012 |
| Portraying breast cancers with long noncoding RNAs O Van Grembergen, M Bizet, EJ de Bony, E Calonne, P Putmans, ... Science advances 2 (9), e1600220, 2016 | 123 | 2016 |
| Distinct mesoderm migration phenotypes in extra-embryonic and embryonic regions of the early mouse embryo B Saykali, N Mathiah, W Nahaboo, ML Racu, L Hammou, M Defrance, ... Elife 8, e42434, 2019 | 104 | 2019 |
| TIGER: The gene expression regulatory variation landscape of human pancreatic islets L Alonso, A Piron, I Moran, M Guindo-Martínez, S Bonàs-Guarch, G Atla, ... Cell reports 37 (2), 2021 | 98 | 2021 |
| MHC class II expression and potential antigen-presenting cells in the retina during experimental autoimmune uveitis DA Lipski, R Dewispelaere, V Foucart, LE Caspers, M Defrance, C Bruyns, ... Journal of neuroinflammation 14 (1), 136, 2017 | 96 | 2017 |
| Contrastive self-supervised clustering of scRNA-seq data M Ciortan, M Defrance BMC bioinformatics 22 (1), 280, 2021 | 94 | 2021 |
| Regulation of DNA methylation patterns by CK2-mediated phosphorylation of Dnmt3a R Deplus, L Blanchon, A Rajavelu, A Boukaba, M Defrance, J Luciani, ... Cell reports 8 (3), 743-753, 2014 | 93 | 2014 |
