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Matthew Douglas Johnston
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Year
Stochastic analysis of biochemical reaction networks with absolute concentration robustness
DF Anderson, GA Enciso, MD Johnston
Journal of The Royal Society Interface 11 (93), 20130943, 2014
782014
Dynamics of vaccination strategies via projected dynamical systems
MG Cojocaru, CT Bauch, MD Johnston
Bulletin of mathematical biology 69 (5), 1453-1476, 2007
712007
Linear conjugacy of chemical reaction networks
MD Johnston, D Siegel
Journal of mathematical chemistry 49 (7), 1263-1282, 2011
632011
Translated chemical reaction networks
MD Johnston
Bulletin of mathematical biology 76 (5), 1081-1116, 2014
622014
Computing weakly reversible linearly conjugate chemical reaction networks with minimal deficiency
MD Johnston, D Siegel, G Szederkényi
Mathematical biosciences 241 (1), 88-98, 2013
612013
A linear programming approach to weak reversibility and linear conjugacy of chemical reaction networks
MD Johnston, D Siegel, G Szederkényi
Journal of Mathematical Chemistry 50 (1), 274-288, 2012
552012
A dynamical framework for modeling fear of infection and frustration with social distancing in COVID-19 spread
MD Johnston, B Pell
arXiv preprint arXiv:2008.06023, 2020
362020
A deficiency-based approach to parametrizing positive equilibria of biochemical reaction systems
MD Johnston, S Müller, C Pantea
Bulletin of Mathematical Biology 81 (4), 1143-1172, 2019
342019
Dynamical equivalence and linear conjugacy of chemical reaction networks: new results and methods
MD Johnston, D Siegel, G Szederkényi
arXiv preprint arXiv:1111.1441, 2011
332011
Realizations of kinetic differential equations
G Craciun, MD Johnston, G Szederkényi, E Tonello, J Tóth, PY Yu
arXiv preprint arXiv:1907.07266, 2019
322019
Network translation and steady-state properties of chemical reaction systems
E Tonello, MD Johnston
Bulletin of Mathematical Biology 80 (9), 2306-2337, 2018
212018
Conditions for extinction events in chemical reaction networks with discrete state spaces
MD Johnston, DF Anderson, G Craciun, R Brijder
Journal of mathematical biology 76 (6), 1535-1558, 2018
212018
A framework for deriving analytic steady states of biochemical reaction networks
BS Hernandez, PVN Lubenia, MD Johnston, JK Kim
PLoS computational biology 19 (4), e1011039, 2023
192023
A computational approach to persistence, permanence, and endotacticity of biochemical reaction systems
MD Johnston, C Pantea, P Donnell
Journal of mathematical biology 72 (1), 467-498, 2016
182016
A computational approach to steady state correspondence of regular and generalized mass action systems
MD Johnston
Bulletin of mathematical biology 77 (6), 1065-1100, 2015
182015
Weak dynamical nonemptiability and persistence of chemical kinetics systems
MD Johnston, D Siegel
SIAM Journal on Applied Mathematics 71 (4), 1263-1279, 2011
182011
On classes of reaction networks and their associated polynomial dynamical systems
DF Anderson, JD Brunner, G Craciun, MD Johnston
Journal of Mathematical Chemistry 58 (9), 1895-1925, 2020
172020
Topics in Chemical Reaction Network Theory
M Johnston
172011
Computing weakly reversible deficiency zero network translations using elementary flux modes
MD Johnston, E Burton
Bulletin of Mathematical Biology 81 (5), 1613-1644, 2019
142019
Absolute concentration robustness: Algebra and geometry
LDG Puente, E Gross, HA Harrington, M Johnston, N Meshkat, MP Millán, ...
Journal of Symbolic Computation 128, 102398, 2025
132025
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Articles 1–20