| FFAS03: a server for profile–profile sequence alignments L Jaroszewski, L Rychlewski, Z Li, W Li, A Godzik Nucleic acids research 33 (suppl_2), W284-W288, 2005 | 575 | 2005 |
| FATCAT 2.0: towards a better understanding of the structural diversity of proteins Z Li, L Jaroszewski, M Iyer, M Sedova, A Godzik Nucleic acids research 48 (W1), W60-W64, 2020 | 252 | 2020 |
| Three-dimensional structural view of the central metabolic network of Thermotoga maritima Y Zhang, I Thiele, D Weekes, Z Li, L Jaroszewski, K Ginalski, AM Deacon, ... Science 325 (5947), 1544-1549, 2009 | 236 | 2009 |
| Exploration of uncharted regions of the protein universe L Jaroszewski, Z Li, SS Krishna, C Bakolitsa, J Wooley, AM Deacon, ... PLoS biology 7 (9), e1000205, 2009 | 165 | 2009 |
| FFAS server: novel features and applications L Jaroszewski, Z Li, X Cai, C Weber, A Godzik Nucleic acids research 39 (suppl_2), W38-W44, 2011 | 161 | 2011 |
| Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli RL Chang, K Andrews, D Kim, Z Li, A Godzik, BO Palsson Science 340 (6137), 1220-1223, 2013 | 151 | 2013 |
| FFAS-3D: improving fold recognition by including optimized structural features and template re-ranking D Xu, L Jaroszewski, Z Li, A Godzik Bioinformatics 30 (5), 660-667, 2014 | 132 | 2014 |
| bNAber: database of broadly neutralizing HIV antibodies AM Eroshkin, A LeBlanc, D Weekes, K Post, Z Li, A Rajput, ST Butera, ... Nucleic acids research 42 (D1), D1133-D1139, 2014 | 101 | 2014 |
| PDBFlex: exploring flexibility in protein structures T Hrabe, Z Li, M Sedova, P Rotkiewicz, L Jaroszewski, A Godzik Nucleic acids research 44 (D1), D423-D428, 2016 | 100 | 2016 |
| Structural determinants of limited proteolysis MD Kazanov, Y Igarashi, AM Eroshkin, P Cieplak, B Ratnikov, Y Zhang, ... Journal of proteome research 10 (8), 3642-3651, 2011 | 74 | 2011 |
| AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain–domain interaction prediction D Xu, L Jaroszewski, Z Li, A Godzik Bioinformatics 31 (13), 2098-2105, 2015 | 69 | 2015 |
| POSA: a user-driven, interactive multiple protein structure alignment server Z Li, P Natarajan, Y Ye, T Hrabe, A Godzik Nucleic acids research 42 (W1), W240-W245, 2014 | 69 | 2014 |
| AIDA: ab initio domain assembly server D Xu, L Jaroszewski, Z Li, A Godzik Nucleic acids research 42 (W1), W308-W313, 2014 | 63 | 2014 |
| Using an alignment of fragment strings for comparing protein structures I Friedberg, T Harder, R Kolodny, E Sitbon, Z Li, A Godzik Bioinformatics 23 (2), e219-e224, 2007 | 56 | 2007 |
| Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation‐induced damage RL Chang, JA Stanley, MC Robinson, JW Sher, Z Li, YA Chan, ... The EMBO Journal 39 (23), e104523, 2020 | 52 | 2020 |
| Modeling and analyzing three-dimensional structures of human disease proteins Y Ye, Z Li, A Godzik Biocomputing 2006, 439-450, 2006 | 42 | 2006 |
| Flexible Structural Neighborhood—a database of protein structural similarities and alignments Z Li, Y Ye, A Godzik Nucleic acids research 34 (suppl_1), D277-D280, 2006 | 39 | 2006 |
| Difference contact maps: From what to why in the analysis of the conformational flexibility of proteins M Iyer, Z Li, L Jaroszewski, M Sedova, A Godzik PloS one 15 (3), e0226702, 2020 | 22 | 2020 |
| Putative type IV secretion genes in Bacillus anthracis M Grynberg, Z Li, E Szczurek, A Godzik Trends in microbiology 15 (5), 191-195, 2007 | 18 | 2007 |
| Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase A Sheydina, RY Eberhardt, DJ Rigden, Y Chang, Z Li, CC Zmasek, ... BMC bioinformatics 15 (1), 112, 2014 | 17 | 2014 |
Adam GodzikProfessor, University of California Riverside School of MedicineVerified email at medsch.ucr.edu
