| Tracking the COVID-19 pandemic in Australia using genomics T Seemann, CR Lane, NL Sherry, S Duchene, A Gonçalves da Silva, ... Nature communications 11 (1), 4376, 2020 | 218 | 2020 |
| Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016 NL Sherry, CR Lane, JC Kwong, M Schultz, M Sait, K Stevens, S Ballard, ... Journal of Clinical Microbiology 57 (9), 10.1128/jcm. 00573-19, 2019 | 99 | 2019 |
| Genomics-informed responses in the elimination of COVID-19 in Victoria, Australia: an observational, genomic epidemiological study CR Lane, NL Sherry, AF Porter, S Duchene, K Horan, P Andersson, ... The Lancet Public Health 6 (8), e547-e556, 2021 | 82 | 2021 |
| Increasing antimicrobial resistance in nontyphoidal Salmonella isolates in Australia from 1979 to 2015 DA Williamson, CR Lane, M Easton, M Valcanis, J Strachan, MG Veitch, ... Antimicrobial Agents and Chemotherapy 62 (2), 10.1128/aac. 02012-17, 2018 | 79 | 2018 |
| An implementation science approach to evaluating pathogen whole genome sequencing in public health AS Ferdinand, M Kelaher, CR Lane, AG da Silva, NL Sherry, SA Ballard, ... Genome medicine 13 (1), 121, 2021 | 78 | 2021 |
| Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak JC Kwong, CR Lane, F Romanes, AG da Silva, M Easton, K Cronin, ... PeerJ 6, e4210, 2018 | 78 | 2018 |
| The contribution of travellers visiting friends and relatives to notified infectious diseases in Australia: state-based enhanced surveillance AE Heywood, N Zwar, BL Forssman, H Seale, N Stephens, J Musto, ... Epidemiology & Infection 144 (16), 3554-3563, 2016 | 49 | 2016 |
| Travel Destinations and Sexual Behavior as Indicators of Antibiotic Resistant Shigella Strains—Victoria, Australia CR Lane, B Sutton, M Valcanis, M Kirk, C Walker, K Lalor, N Stephens Clinical Infectious Diseases 62 (6), 722-729, 2016 | 44 | 2016 |
| Search and contain: impact of an integrated genomic and epidemiological surveillance and response program for control of carbapenemase-producing Enterobacterales CR Lane, J Brett, M Schultz, CL Gorrie, K Stevens, DRM Cameron, ... Clinical Infectious Diseases 73 (11), e3912-e3920, 2021 | 34 | 2021 |
| Recent trends in invasive group A Streptococcus disease in Victoria J Oliver, M Wilmot, J Strachan, S St George, CR Lane, SA Ballard, M Sait, ... Communicable Diseases Intelligence 43, 2019 | 34 | 2019 |
| Pilot study of a combined genomic and epidemiologic surveillance program for hospital-acquired multidrug-resistant pathogens across multiple hospital networks in Australia NL Sherry, RS Lee, CL Gorrie, JC Kwong, RL Stuart, TM Korman, ... Infection Control & Hospital Epidemiology 42 (5), 573-581, 2021 | 30 | 2021 |
| Genomics for antimicrobial resistance—progress and future directions NL Sherry, JYH Lee, SG Giulieri, CH Connor, K Horan, JA Lacey, ... Antimicrobial agents and chemotherapy 69 (5), e01082-24, 2025 | 27 | 2025 |
| Genomic epidemiology and antimicrobial resistance mechanisms of imported typhoid in Australia DJ Ingle, P Andersson, M Valcanis, M Wilmot, M Easton, C Lane, ... Antimicrobial agents and chemotherapy 65 (12), 10.1128/aac. 01200-21, 2021 | 27 | 2021 |
| Understanding influenza vaccine protection in the community: an assessment of the 2013 influenza season in Victoria, Australia KS Carville, KA Grant, SG Sullivan, JE Fielding, CR Lane, L Franklin, ... Vaccine 33 (2), 341-345, 2015 | 24 | 2015 |
| Reconstruction of the genomes of drug-resistant pathogens for outbreak investigation through metagenomic sequencing A Mu, JC Kwong, NS Isles, A Gonçalves da Silva, MB Schultz, SA Ballard, ... Msphere 4 (1), 10.1128/msphere. 00529-18, 2019 | 21 | 2019 |
| Seasonal influenza vaccine effectiveness estimates: Development of a parsimonious case test negative model using a causal approach CR Lane, KS Carville, N Pierse, HA Kelly Vaccine 34 (8), 1070-1076, 2016 | 20 | 2016 |
| Outbreak of locally acquired azithromycin-resistant Shigella flexneri infection in men who have sex with men M Valcanis, JD Brown, B Hazelton, MV O'Sullivan, A Kuzevski, CR Lane, ... Pathology-Journal of the RCPA 47 (1), 87-88, 2015 | 20 | 2015 |
| Incursions of Candida auris into Australia, 2018 CR Lane, T Seemann, LJ Worth, M Easton, W Pitchers, J Wong, ... Emerging Infectious Diseases 26 (6), 1326, 2020 | 19 | 2020 |
| Genomic epidemiology offers high resolution estimates of serial intervals for COVID-19 JE Stockdale, K Susvitasari, P Tupper, B Sobkowiak, N Mulberry, ... Nature communications 14 (1), 4830, 2023 | 12 | 2023 |
| Influenza vaccine effectiveness in general practice and in hospital patients in Victoria, 2011–2013 HA Kelly, C Lane, AC Cheng Medical Journal of Australia 204 (2), 76-76, 2016 | 11 | 2016 |
