| Binding of an RNA aptamer and a partial peptide of a prion protein: crucial importance of water entropy in molecular recognition T Hayashi, H Oshima, T Mashima, T Nagata, M Katahira, M Kinoshita Nucleic acids research 42 (11), 6861-6875, 2014 | 103 | 2014 |
| Mechanism of globule-to-coil transition of poly (N-isopropylacrylamide) in water: Relevance to cold denaturation of a protein M Inoue, T Hayashi, S Hikiri, M Ikeguchi, M Kinoshita Journal of Molecular Liquids 292, 111374, 2019 | 32 | 2019 |
| Effects of salt or cosolvent addition on solubility of a hydrophobic solute in water: Relevance to those on thermal stability of a protein S Murakami, T Hayashi, M Kinoshita The Journal of Chemical Physics 146 (5), 2017 | 30 | 2017 |
| Unified elucidation of the entropy-driven and-opposed hydrophobic effects M Kinoshita, T Hayashi Physical Chemistry Chemical Physics 19 (38), 25891-25904, 2017 | 30 | 2017 |
| Accurate evaluation of the absorption maxima of retinal proteins based on a hybrid QM/MM method A Matsuura, H Sato, H Houjou, S Saito, T Hayashi, M Sakurai Journal of computational chemistry 27 (14), 1623-1630, 2006 | 30 | 2006 |
| An accurate and rapid method for calculating hydration free energies of a variety of solutes including proteins S Hikiri, T Hayashi, M Inoue, T Ekimoto, M Ikeguchi, M Kinoshita The Journal of Chemical Physics 150 (17), 2019 | 28 | 2019 |
| Universal effects of solvent species on the stabilized structure of a protein T Hayashi, M Inoue, S Yasuda, E Petretto, T Škrbić, A Giacometti, ... The Journal of Chemical Physics 149 (4), 2018 | 27 | 2018 |
| Water based on a molecular model behaves like a hard-sphere solvent for a nonpolar solute when the reference interaction site model and related theories are employed T Hayashi, H Oshima, Y Harano, M Kinoshita Journal of Physics: Condensed Matter 28 (34), 344003, 2016 | 25 | 2016 |
| Hydration properties of a protein at low and high pressures: Physics of pressure denaturation M Inoue, T Hayashi, S Hikiri, M Ikeguchi, M Kinoshita The Journal of Chemical Physics 152 (6), 2020 | 24 | 2020 |
| Unraveling protein folding mechanism by analyzing the hierarchy of models with increasing level of detail T Hayashi, S Yasuda, T Škrbić, A Giacometti, M Kinoshita The Journal of Chemical Physics 147 (12), 2017 | 23 | 2017 |
| Development and structural determination of an anti-PrPC aptamer that blocks pathological conformational conversion of prion protein T Mashima, JH Lee, YO Kamatari, T Hayashi, T Nagata, F Nishikawa, ... Scientific Reports 10 (1), 4934, 2020 | 21 | 2020 |
| Statistical Thermodynamics for Actin-Myosin Binding: The Crucial Importance of Hydration Effects H Oshima, T Hayashi, M Kinoshita Biophysical journal 110 (11), 2496-2506, 2016 | 21 | 2016 |
| Mechanism of one-to-many molecular recognition accompanying target-dependent structure formation: for the tumor suppressor p53 protein as an example T Hayashi, H Oshima, S Yasuda, M Kinoshita The Journal of Physical Chemistry B 119 (44), 14120-14129, 2015 | 21 | 2015 |
| ATP-induced conformational changes of nucleotide-binding domains in an ABC transporter. importance of the water-mediated entropic force T Hayashi, S Chiba, Y Kaneta, T Furuta, M Sakurai The Journal of Physical Chemistry B 118 (44), 12612-12620, 2014 | 19 | 2014 |
| How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained? T Hayashi, S Yasuda, K Suzuki, T Akiyama, K Kanehara, K Kojima, ... The Journal of Physical Chemistry B 124 (6), 990-1000, 2020 | 18 | 2020 |
| How Does the Recently Discovered Peptide MIP Exhibit Much Higher Binding Affinity than an Anticancer Protein p53 for an Oncoprotein MDM2? T Yamada, T Hayashi, S Hikiri, N Kobayashi, H Yanagawa, M Ikeguchi, ... Journal of chemical information and modeling 59 (8), 3533-3544, 2019 | 17 | 2019 |
| Comparison based on statistical thermodynamics between globule-to-coil transition of poly (N-isopropylacrylamide) and cold denaturation of a protein M Inoue, T Hayashi, S Hikiri, M Ikeguchi, M Kinoshita Journal of Molecular Liquids 317, 114129, 2020 | 16 | 2020 |
| Potential of mean force between spherical particles in an ionic liquid and its decomposition into energetic and entropic components: An analysis using an integral equation theory K Amano, T Hayashi, K Hashimoto, N Nishi, T Sakka Journal of Molecular Liquids 257, 121-131, 2018 | 15 | 2018 |
| Dynamics and structural changes induced by ATP and/or substrate binding in the inward-facing conformation state of P-glycoprotein Y Watanabe, WL Hsu, S Chiba, T Hayashi, T Furuta, M Sakurai Chemical Physics Letters 557, 145-149, 2013 | 15 | 2013 |
| Theoretical study on the absorption maxima of real GFPs A Matsuura, T Hayashi, H Sato, A Takahashi, M Sakurai Chemical Physics Letters 484 (4-6), 324-329, 2010 | 14 | 2010 |
Takashi NagataKyoto UniversityVerified email at kyoto-u.ac.jp
