| Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic GJD Smith, D Vijaykrishna, J Bahl, SJ Lycett, M Worobey, OG Pybus, ... Nature 459 (7250), 1122-1125, 2009 | 3049 | 2009 |
| Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity EC Thomson, LE Rosen, JG Shepherd, R Spreafico, A da Silva Filipe, ... Cell 184 (5), 1171-1187. e20, 2021 | 636 | 2021 |
| The genesis and source of the H7N9 influenza viruses causing human infections in China TTY Lam, J Wang, Y Shen, B Zhou, L Duan, CL Cheung, C Ma, SJ Lycett, ... Nature 502 (7470), 241-244, 2013 | 568 | 2013 |
| Fast dating using least-squares criteria and algorithms TH To, M Jung, S Lycett, O Gascuel Systematic biology 65 (1), 82-97, 2016 | 496 | 2016 |
| Automated analysis of phylogenetic clusters M Ragonnet-Cronin, E Hodcroft, S Hué, E Fearnhill, V Delpech, ... BMC bioinformatics 14 (1), 317, 2013 | 398 | 2013 |
| Role for migratory wild birds in the global spread of avian influenza H5N8 Global Consortium for H5N8 and Related Influenza Viruses Science 354 (6309), 213-217, 2016 | 358 | 2016 |
| A brief history of bird flu SJ Lycett, F Duchatel, P Digard Philosophical Transactions of the Royal Society B 374 (1775), 20180257, 2019 | 309 | 2019 |
| Gene exchange drives the ecological success of a multi-host bacterial pathogen EJ Richardson, R Bacigalupe, EM Harrison, LA Weinert, S Lycett, ... Nature ecology & evolution 2 (9), 1468-1478, 2018 | 266 | 2018 |
| Transmission network parameters estimated from HIV sequences for a nationwide epidemic AJ Leigh Brown, SJ Lycett, L Weinert, GJ Hughes, E Fearnhill, DT Dunn Journal of Infectious Diseases 204 (9), 1463-1469, 2011 | 248 | 2011 |
| Monitoring SARS-CoV-2 circulation and diversity through community wastewater sequencing, the Netherlands and Belgium R Izquierdo-Lara, G Elsinga, L Heijnen, BB Oude Munnink, ... Emerging infectious diseases 27 (5), 1405, 2021 | 240 | 2021 |
| Molecular phylodynamics of the heterosexual HIV epidemic in the United Kingdom GJ Hughes, E Fearnhill, D Dunn, SJ Lycett, A Rambaut, AJ Leigh Brown, ... PLoS pathogens 5 (9), e1000590, 2009 | 213 | 2009 |
| Time resolved study of self‐assembled InAs quantum dots H Yu, S Lycett, C Roberts, R Murray Applied Physics Letters 69 (26), 4087-4089, 1996 | 186 | 1996 |
| Supersize me: how whole-genome sequencing and big data are transforming epidemiology RR Kao, DT Haydon, SJ Lycett, PR Murcia Trends in microbiology 22 (5), 282-291, 2014 | 165 | 2014 |
| Adaptation, spread and transmission of SARS-CoV-2 in farmed minks and associated humans in the Netherlands L Lu, RS Sikkema, FC Velkers, DF Nieuwenhuijse, EAJ Fischer, PA Meijer, ... Nature communications 12 (1), 6802, 2021 | 136 | 2021 |
| Genesis and spread of multiple reassortants during the 2016/2017 H5 avian influenza epidemic in Eurasia SJ Lycett, A Pohlmann, C Staubach, V Caliendo, M Woolhouse, M Beer, ... Proceedings of the National Academy of Sciences 117 (34), 20814-20825, 2020 | 126 | 2020 |
| Combining genomics and epidemiology to analyse bi-directional transmission of Mycobacterium bovis in a multi-host system J Crispell, CH Benton, D Balaz, N De Maio, A Ahkmetova, A Allen, R Biek, ... elife 8, e45833, 2019 | 122 | 2019 |
| Reassortment patterns of avian influenza virus internal segments among different subtypes L Lu, SJ Lycett, AJ Leigh Brown BMC evolutionary biology 14 (1), 16, 2014 | 118 | 2014 |
| The short stalk length of highly pathogenic avian influenza H5N1 virus neuraminidase limits transmission of pandemic H1N1 virus in ferrets D Blumenkrantz, KL Roberts, H Shelton, S Lycett, WS Barclay Journal of virology 87 (19), 10539-10551, 2013 | 115 | 2013 |
| Assessing the epidemic potential of RNA and DNA viruses MEJ Woolhouse, L Brierley, C McCaffery, S Lycett Emerging infectious diseases 22 (12), 2037, 2016 | 110 | 2016 |
| Reassortment between influenza B lineages and the emergence of a coadapted PB1–PB2–HA gene complex G Dudas, T Bedford, S Lycett, A Rambaut Molecular biology and evolution 32 (1), 162-172, 2015 | 110 | 2015 |
Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
