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Manu Aggarwal
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Growth Dynamics and Survival of Liberibacter crescens BT-1, an Important Model Organism for the Citrus Huanglongbing Pathogen “Candidatus Liberibacter …
M Sena-Vélez, SD Holland, M Aggarwal, NG Cogan, M Jain, DW Gabriel, ...
Applied and environmental microbiology 85 (21), e01656-19, 2019
222019
A framework for model analysis across multiple experiment regimes: Investigating effects of zinc on Xylella fastidiosa as a case study
M Aggarwal, MY Hussaini, L De La Fuente, F Navarrete, NG Cogan
Journal of Theoretical Biology 457, 88-100, 2018
112018
Where to look and how to look: combining global sensitivity analysis with fast/slow analysis to study multi-timescale oscillations
M Aggarwal, N Cogan, R Bertram
Mathematical biosciences 314, 1-12, 2019
102019
A mathematical model for the determination of mouse excisional wound healing parameters from photographic data
NG Cogan, AP Mellers, BN Patel, BD Powell, M Aggarwal, KM Harper, ...
Wound Repair and Regeneration 26 (2), 136-143, 2018
82018
Tight basis cycle representatives for persistent homology of large biological data sets
M Aggarwal, V Periwal
PLOS Computational Biology 19 (5), e1010341, 2023
52023
Physiological insights into electrodiffusive maintenance of gastric mucus through sensitivity analysis and simulations
M Aggarwal, NG Cogan, OL Lewis
Journal of mathematical biology 83 (3), 30, 2021
52021
Dory: Computation of persistence diagrams up to dimension two for Vietoris–Rips filtrations of large data sets
M Aggarwal, V Periwal
Journal of computational science 79, 102290, 2024
32024
Dory: Overcoming barriers to computing persistent homology
M Aggarwal, V Periwal
arXiv preprint arXiv:2103.05608, 2021
32021
Geometric and topological characterization of the cytoarchitecture of islets of Langerhans
M Aggarwal, DA Striegel, M Hara, V Periwal
PLoS Computational Biology 19 (11), e1011617, 2023
22023
A model of gastric mucosal pH regulation: Extending sensitivity analysis using Sobol’indices to understand higher moments
M Aggarwal, O Lewis, A Jarrett, MY Hussaini, NG Cogan
Bulletin of mathematical biology 86 (7), 77, 2024
12024
Forecasting drug resistant HIV protease evolution
M Aggarwal, V Periwal
PLOS Computational Biology 22 (1), e1013913, 2026
2026
Sensitivity based model agnostic scalable explanations of deep learning
M Aggarwal, NG Cogan, V Periwal
bioRxiv, 2025
2025
Topological approach to void finding applied to the SDSS galaxy map
M Aggarwal, M Tonegawa, S Appleby, C Park, V Periwal
The Astrophysical Journal 975 (1), 95, 2024
2024
Mathematical Modeling and Sensitivity Analysis for Biological Systems
M Aggarwal
The Florida State University, 2019
2019
Which morphological features on histopathology images predict bulk gene expression?
M Aggarwal, V Periwal
2026 Joint Mathematics Meetings (JMM 2026), 0
Functional significance of topological features from large-scale biological networks
M Aggarwal, V Periwal
2024 Spring Eastern Sectional Meeting, 0
Is that a chromatin loop or not? Scaling Persistent Homology to Large Biological Datasets
M Aggarwal, V Periwal
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Articles 1–17