| An Expanded View of Complex Traits: From Polygenic to Omnigenic EA Boyle, YI Li, JK Pritchard Cell 169 (7), 1177-1186, 2017 | 3391 | 2017 |
| Predicting splicing from primary sequence with deep learning K Jaganathan, SK Panagiotopoulou, JF McRae, SF Darbandi, D Knowles, ... Cell 176 (3), 535-548. e24, 2019 | 2725 | 2019 |
| The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 1126 | 2014 |
| G&T-seq: parallel sequencing of single-cell genomes and transcriptomes IC Macaulay, W Haerty, P Kumar, YI Li, TX Hu, MJ Teng, M Goolam, ... Nature methods 12 (6), 519-522, 2015 | 924 | 2015 |
| Annotation-free quantification of RNA splicing using LeafCutter YI Li, DA Knowles, J Humphrey, AN Barbeira, SP Dickinson, HK Im, ... Nature genetics 50 (1), 151, 2018 | 823 | 2018 |
| RNA splicing is a primary link between genetic variation and disease YI Li, B van de Geijn, A Raj, DA Knowles, AA Petti, D Golan, Y Gilad, ... Science 352 (6285), 600-604, 2016 | 758 | 2016 |
| Haplotype-resolved diverse human genomes and integrated analysis of structural variation P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ... Science 372 (6537), eabf7117, 2021 | 730 | 2021 |
| Characterizing the major structural variant alleles of the human genome PA Audano, A Sulovari, TA Graves-Lindsay, S Cantsilieris, M Sorensen, ... Cell 176 (3), 663-675. e19, 2019 | 528 | 2019 |
| Trans effects on gene expression can drive omnigenic inheritance X Liu, YI Li, JK Pritchard Cell 177 (4), 1022-1034. e6, 2019 | 461 | 2019 |
| Integrative transcriptome analyses of the aging brain implicate altered splicing in Alzheimer’s disease susceptibility T Raj, YI Li, G Wong, J Humphrey, M Wang, S Ramdhani, YC Wang, B Ng, ... Nature genetics 50 (11), 1584-1592, 2018 | 455 | 2018 |
| Insights into the Evolution of Longevity from the Bowhead Whale Genome M Keane, J Semeiks, AE Webb, YI Li, V Quesada, T Craig, LB Madsen, ... Cell reports 10 (1), 112-122, 2015 | 437 | 2015 |
| The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage H Bradley Shaffer, P Minx, DE Warren, AM Shedlock, RC Thomson, ... Genome biology 14 (3), R28, 2013 | 397 | 2013 |
| The Human Ageing Genomic Resources: online databases and tools for biogerontologists JP De Magalhães, A Budovsky, G Lehmann, J Costa, Y Li, V Fraifeld, ... Aging cell 8 (1), 65-72, 2009 | 245 | 2009 |
| RBFOX and PTBP1 proteins regulate the alternative splicing of micro-exons in human brain transcripts YI Li, L Sanchez-Pulido, W Haerty, CP Ponting Genome research 25 (1), 1-13, 2015 | 243 | 2015 |
| Predicting RNA splicing from DNA sequence using Pangolin T Zeng, YI Li Genome biology 23 (1), 103, 2022 | 234 | 2022 |
| Prioritizing Parkinson’s disease genes using population-scale transcriptomic data YI Li, G Wong, J Humphrey, T Raj Nature Communications 10 (1), 994, 2019 | 179 | 2019 |
| Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling A Raj, SH Wang, H Shim, A Harpak, YI Li, B Engelmann, M Stephens, ... eLife 5, e13328, 2016 | 174 | 2016 |
| m6A mRNA methylation is essential for oligodendrocyte maturation and CNS myelination H Xu, Y Dzhashiashvili, A Shah, RB Kunjamma, Y Weng, B Elbaz, Q Fei, ... Neuron 105 (2), 293-309. e5, 2020 | 165 | 2020 |
| Impact of regulatory variation across human iPSCs and differentiated cells NE Banovich, YI Li, A Raj, MC Ward, P Greenside, D Calderon, PY Tung, ... Genome research 28 (1), 122-131, 2018 | 149 | 2018 |
| RNA editing underlies genetic risk of common inflammatory diseases Q Li, MJ Gloudemans, JM Geisinger, B Fan, F Aguet, T Sun, ... Nature 608 (7923), 569-577, 2022 | 147 | 2022 |
Jonathan K PritchardStanford UniversityVerified email at stanford.edu
